View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10548_low_7 (Length: 231)
Name: NF10548_low_7
Description: NF10548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10548_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 29538900 - 29539098
Alignment:
| Q |
16 |
cacgttggacctaaatatctcaataaatagctttgtgcgtgcagtcacattttcccctccaacctcatttcataccttaacaagtgaattatatgatcta |
115 |
Q |
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| T |
29538900 |
cacgttggacctaaatatctcaataaatagctttgtgcgtggagtcacattttcccctccaacctcatttcataccttaacaagtgaattatatgatcta |
29538999 |
T |
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| Q |
116 |
actaccttttcctcgttcattcttttcaatccttaaactaattgcatatccattttattttttgaatgttaagataagagacttctgtagagttagcac |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29539000 |
actaccttttcctcgttcattcttttcaatccttaaactaattgcatatccattttattttttgaatgttaagataagagacttctgtagagttagcac |
29539098 |
T |
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