View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10550_low_5 (Length: 241)
Name: NF10550_low_5
Description: NF10550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10550_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3310691 - 3310467
Alignment:
| Q |
1 |
ttgttatcccttttgaaagaaacatgtagctatttatactgtgattgtcatatgggttttgcaagtgtttgtataattaattttataagaaccatgaatt |
100 |
Q |
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| T |
3310691 |
ttgttatcccttttgaaagaaacatgtagctatttatactgtgattgtcatatgggttttgcaagtgtttgtataattaattttataagaaccatgaatt |
3310592 |
T |
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| Q |
101 |
atgttgttccatgaatatttggttaatggctattcttgtgagtataatatcatata--tgtggtcaataaataaccttaatgatttagcaaatatattgt |
198 |
Q |
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| T |
3310591 |
atgctgttccatgaatatttggttaatggctattcttgtgagtataatatcatatatttgtggtcaatgaataaccttaatgatttggcaaatatattgt |
3310492 |
T |
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| Q |
199 |
tttcagatttacactatttttataa |
223 |
Q |
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| T |
3310491 |
tctcagatttacactatttttataa |
3310467 |
T |
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