View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10551_high_8 (Length: 302)
Name: NF10551_high_8
Description: NF10551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10551_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 42 - 286
Target Start/End: Complemental strand, 14103174 - 14102910
Alignment:
| Q |
42 |
gtggaacaaatcaccatttttcactcttatctatgaatcaaattcaatttcatgtttagactcaagacttcaacactatctactacacta------tagt |
135 |
Q |
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| T |
14103174 |
gtggaacaaatcaccatttttcactcttatctatgaatcaaattcaatttcatgtttagactcaagacttcaacactatctactacactacagttgaagt |
14103075 |
T |
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| Q |
136 |
gttcatacaaactaacatttactctatgcatttgaaaattgccattccttttgtaagaatttcaa--------------aaatgcttttttaacatctaa |
221 |
Q |
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| T |
14103074 |
gttcatacaaactaacatttactctatgcatttgaaaattgccattccttttgtaagaatttcaaaatctgatatatggaaatgcttttttaacatctaa |
14102975 |
T |
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| Q |
222 |
tgaaccataacttttctgcttttcaataaaccagagtagttgagagaaacaaccttagtactctg |
286 |
Q |
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| T |
14102974 |
tgaaccataacttttctgcttttcaataaaccagagtatttgagagaaacaaccttggtactctg |
14102910 |
T |
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