View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10551_low_24 (Length: 212)

Name: NF10551_low_24
Description: NF10551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10551_low_24
NF10551_low_24
[»] chr4 (43 HSPs)
chr4 (12-197)||(34194939-34195124)
chr4 (93-188)||(36320952-36321047)
chr4 (93-188)||(36335161-36335256)
chr4 (93-188)||(36350251-36350346)
chr4 (117-188)||(14750132-14750203)
chr4 (117-188)||(14769235-14769306)
chr4 (117-188)||(19367500-19367571)
chr4 (117-188)||(43150729-43150800)
chr4 (117-188)||(48916556-48916627)
chr4 (117-188)||(762743-762814)
chr4 (93-188)||(18791247-18791343)
chr4 (93-188)||(18805875-18805971)
chr4 (93-188)||(20329082-20329177)
chr4 (93-188)||(20336111-20336206)
chr4 (22-70)||(30747939-30747987)
chr4 (22-70)||(30763244-30763292)
chr4 (22-70)||(33664539-33664587)
chr4 (22-70)||(33675857-33675905)
chr4 (22-70)||(33683351-33683399)
chr4 (112-188)||(54827726-54827802)
chr4 (112-188)||(54842953-54843029)
chr4 (12-70)||(35058300-35058358)
chr4 (112-197)||(5704052-5704137)
chr4 (117-188)||(14728727-14728798)
chr4 (24-65)||(762861-762902)
chr4 (24-65)||(14750250-14750291)
chr4 (24-65)||(14769353-14769394)
chr4 (24-65)||(19367412-19367453)
chr4 (24-65)||(43150640-43150681)
chr4 (112-188)||(4565186-4565262)
chr4 (93-176)||(46659112-46659195)
chr4 (24-61)||(4565309-4565346)
chr4 (24-61)||(14728639-14728676)
chr4 (95-176)||(15377213-15377293)
chr4 (95-176)||(15401043-15401123)
chr4 (24-61)||(48916469-48916506)
chr4 (93-176)||(15397145-15397227)
chr4 (93-176)||(18711460-18711542)
chr4 (15-70)||(18791362-18791417)
chr4 (15-70)||(18805990-18806045)
chr4 (93-176)||(20756164-20756246)
chr4 (24-63)||(54827644-54827683)
chr4 (24-63)||(54842871-54842910)
[»] chr5 (62 HSPs)
chr5 (12-197)||(27282713-27282897)
chr5 (12-188)||(26772475-26772651)
chr5 (12-188)||(15649326-15649502)
chr5 (12-188)||(15664702-15664878)
chr5 (89-188)||(26767948-26768047)
chr5 (24-188)||(24786046-24786209)
chr5 (93-197)||(29892613-29892716)
chr5 (93-188)||(42137117-42137211)
chr5 (93-197)||(28643372-28643475)
chr5 (93-197)||(28658777-28658879)
chr5 (117-188)||(12056430-12056501)
chr5 (91-188)||(13433176-13433273)
chr5 (91-188)||(13444070-13444167)
chr5 (12-68)||(42065290-42065346)
chr5 (117-188)||(28572784-28572855)
chr5 (91-188)||(28912574-28912672)
chr5 (91-188)||(28927842-28927940)
chr5 (93-188)||(18491241-18491337)
chr5 (93-188)||(18506556-18506652)
chr5 (91-183)||(32586864-32586956)
chr5 (91-183)||(32605293-32605385)
chr5 (22-70)||(37662125-37662173)
chr5 (22-70)||(37677408-37677456)
chr5 (93-188)||(43087779-43087875)
chr5 (117-188)||(37726298-37726369)
chr5 (91-197)||(24675596-24675702)
chr5 (91-197)||(24718123-24718229)
chr5 (91-197)||(24733583-24733689)
chr5 (91-188)||(5632318-5632415)
chr5 (91-188)||(5647192-5647289)
chr5 (91-188)||(30143994-30144091)
chr5 (91-188)||(30178044-30178141)
chr5 (22-70)||(13315422-13315470)
chr5 (22-70)||(13330749-13330797)
chr5 (22-70)||(31425607-31425655)
chr5 (22-70)||(31440945-31440993)
chr5 (93-188)||(43072492-43072588)
chr5 (117-188)||(15749525-15749596)
chr5 (117-188)||(15764753-15764824)
chr5 (93-176)||(22989790-22989873)
chr5 (12-65)||(29892746-29892799)
chr5 (26-65)||(12056548-12056587)
chr5 (97-176)||(37649727-37649806)
chr5 (23-70)||(42137048-42137095)
chr5 (24-61)||(3783730-3783767)
chr5 (24-61)||(3799085-3799122)
chr5 (24-65)||(28572696-28572737)
chr5 (112-188)||(3783815-3783891)
chr5 (112-188)||(3799170-3799246)
chr5 (105-176)||(23004857-23004928)
chr5 (24-59)||(29973022-29973057)
chr5 (24-59)||(30023586-30023621)
chr5 (24-59)||(30038850-30038885)
chr5 (24-59)||(33510568-33510603)
chr5 (24-59)||(33525831-33525866)
chr5 (25-70)||(28912509-28912555)
chr5 (25-70)||(28927777-28927823)
chr5 (155-196)||(6868711-6868752)
chr5 (155-196)||(6883835-6883876)
chr5 (24-61)||(37726211-37726248)
chr5 (27-59)||(2505162-2505194)
chr5 (27-59)||(2520482-2520514)
[»] chr7 (26 HSPs)
chr7 (12-197)||(23832235-23832419)
chr7 (12-197)||(39351471-39351654)
chr7 (93-197)||(5134505-5134608)
chr7 (93-197)||(5151099-5151202)
chr7 (93-197)||(16161376-16161479)
chr7 (91-188)||(4273819-4273916)
chr7 (91-188)||(17241933-17242030)
chr7 (91-197)||(26522301-26522407)
chr7 (91-183)||(32999071-32999163)
chr7 (117-188)||(11027632-11027703)
chr7 (117-188)||(26498693-26498764)
chr7 (12-65)||(16161285-16161338)
chr7 (117-188)||(26599265-26599336)
chr7 (94-196)||(26696318-26696421)
chr7 (97-188)||(31119274-31119365)
chr7 (97-188)||(31133449-31133540)
chr7 (24-61)||(26498815-26498852)
chr7 (24-61)||(26599177-26599214)
chr7 (91-188)||(26660513-26660610)
chr7 (91-188)||(26675706-26675803)
chr7 (91-188)||(26685843-26685940)
chr7 (91-188)||(26689384-26689481)
chr7 (155-196)||(4135921-4135962)
chr7 (155-196)||(4150847-4150888)
chr7 (24-61)||(11027757-11027794)
chr7 (29-66)||(17241873-17241910)
[»] chr3 (82 HSPs)
chr3 (12-197)||(17903627-17903811)
chr3 (93-188)||(22119503-22119598)
chr3 (93-197)||(18236859-18236962)
chr3 (93-197)||(18252216-18252319)
chr3 (93-188)||(8206006-8206100)
chr3 (93-188)||(8221175-8221269)
chr3 (93-188)||(43716898-43716992)
chr3 (93-188)||(47197102-47197198)
chr3 (93-188)||(5709647-5709741)
chr3 (93-188)||(5720557-5720651)
chr3 (93-188)||(5731460-5731554)
chr3 (93-188)||(5760814-5760908)
chr3 (117-188)||(10388223-10388294)
chr3 (117-188)||(10405596-10405667)
chr3 (117-188)||(18283025-18283096)
chr3 (117-188)||(18298326-18298397)
chr3 (117-188)||(18313627-18313698)
chr3 (117-188)||(26427398-26427469)
chr3 (91-183)||(5007896-5007988)
chr3 (91-183)||(5023155-5023247)
chr3 (117-173)||(5600070-5600126)
chr3 (117-173)||(5615311-5615367)
chr3 (91-183)||(28106678-28106770)
chr3 (91-183)||(28121914-28122006)
chr3 (12-68)||(29139470-29139526)
chr3 (12-68)||(29154275-29154331)
chr3 (117-188)||(26680481-26680552)
chr3 (12-70)||(47197214-47197272)
chr3 (22-70)||(16401205-16401253)
chr3 (22-70)||(24322289-24322337)
chr3 (22-70)||(24337641-24337689)
chr3 (117-183)||(22491479-22491545)
chr3 (91-188)||(28333498-28333596)
chr3 (91-188)||(28348600-28348698)
chr3 (93-193)||(6533397-6533498)
chr3 (93-193)||(6547228-6547329)
chr3 (91-188)||(26295294-26295391)
chr3 (93-176)||(4731101-4731184)
chr3 (93-176)||(6186599-6186682)
chr3 (93-176)||(6211368-6211451)
chr3 (117-188)||(6226639-6226710)
chr3 (93-176)||(18324943-18325026)
chr3 (93-176)||(18340040-18340123)
chr3 (12-70)||(22119619-22119678)
chr3 (93-183)||(48460127-48460218)
chr3 (93-183)||(48475886-48475977)
chr3 (94-176)||(4715922-4716004)
chr3 (24-65)||(10388135-10388176)
chr3 (24-65)||(10405508-10405549)
chr3 (24-65)||(18283136-18283177)
chr3 (24-65)||(18298437-18298478)
chr3 (24-65)||(18313738-18313779)
chr3 (24-65)||(26427308-26427349)
chr3 (91-188)||(50140001-50140098)
chr3 (25-65)||(6226552-6226592)
chr3 (25-65)||(22491391-22491431)
chr3 (117-188)||(29656275-29656346)
chr3 (12-58)||(26684671-26684717)
chr3 (117-183)||(29670924-29670990)
chr3 (24-65)||(6533523-6533564)
chr3 (24-65)||(6547354-6547395)
chr3 (24-61)||(29656397-29656434)
chr3 (24-61)||(29671041-29671078)
chr3 (24-60)||(5600178-5600214)
chr3 (24-60)||(5615419-5615455)
chr3 (23-70)||(5709578-5709625)
chr3 (23-70)||(5720488-5720535)
chr3 (23-70)||(5731391-5731438)
chr3 (23-70)||(5760930-5760977)
chr3 (23-70)||(8205936-8205983)
chr3 (23-70)||(8221105-8221152)
chr3 (24-59)||(17975468-17975503)
chr3 (24-59)||(17991016-17991051)
chr3 (24-59)||(18219343-18219378)
chr3 (24-59)||(18234651-18234686)
chr3 (26-65)||(26680602-26680641)
chr3 (93-176)||(36132501-36132583)
chr3 (23-70)||(43716828-43716875)
chr3 (29-66)||(28333438-28333475)
chr3 (29-66)||(28348540-28348577)
chr3 (155-196)||(51776451-51776492)
chr3 (155-196)||(51791537-51791578)
[»] chr6 (65 HSPs)
chr6 (12-188)||(16997103-16997281)
chr6 (12-188)||(27308157-27308334)
chr6 (12-188)||(27212222-27212399)
chr6 (12-188)||(27236829-27237006)
chr6 (93-188)||(34454972-34455067)
chr6 (93-188)||(34469260-34469355)
chr6 (93-183)||(27191930-27192021)
chr6 (93-183)||(27203783-27203874)
chr6 (93-183)||(27245357-27245448)
chr6 (93-183)||(27257220-27257311)
chr6 (93-197)||(29495575-29495678)
chr6 (93-197)||(29510913-29511016)
chr6 (93-188)||(2650786-2650880)
chr6 (93-188)||(4453032-4453127)
chr6 (93-188)||(28978058-28978153)
chr6 (93-189)||(27619931-27620027)
chr6 (93-189)||(27635541-27635637)
chr6 (117-197)||(16563836-16563916)
chr6 (117-188)||(29559131-29559202)
chr6 (117-188)||(31544922-31544993)
chr6 (117-188)||(29543721-29543792)
chr6 (12-70)||(27191856-27191914)
chr6 (12-70)||(27203709-27203767)
chr6 (12-70)||(27245464-27245522)
chr6 (12-70)||(27257327-27257385)
chr6 (91-197)||(29582580-29582686)
chr6 (93-188)||(16668377-16668473)
chr6 (93-188)||(16683659-16683755)
chr6 (91-197)||(29567173-29567280)
chr6 (93-193)||(4753322-4753423)
chr6 (93-193)||(4767212-4767313)
chr6 (93-193)||(4782369-4782470)
chr6 (93-193)||(4785850-4785951)
chr6 (27-70)||(34455089-34455132)
chr6 (27-70)||(34469377-34469420)
chr6 (91-188)||(27001947-27002045)
chr6 (91-188)||(27017453-27017551)
chr6 (24-65)||(29543632-29543673)
chr6 (24-65)||(29559042-29559083)
chr6 (24-65)||(31544833-31544874)
chr6 (93-188)||(27038639-27038735)
chr6 (93-188)||(27066978-27067074)
chr6 (94-196)||(4519565-4519668)
chr6 (94-196)||(4534752-4534855)
chr6 (93-176)||(18939347-18939430)
chr6 (24-70)||(27620045-27620091)
chr6 (24-70)||(27635655-27635701)
chr6 (24-65)||(4753448-4753489)
chr6 (24-65)||(4767148-4767189)
chr6 (24-65)||(4782303-4782344)
chr6 (24-65)||(4785974-4786015)
chr6 (23-70)||(2650903-2650950)
chr6 (24-59)||(7986772-7986807)
chr6 (24-59)||(30548726-30548761)
chr6 (24-59)||(30563991-30564026)
chr6 (24-70)||(4452968-4453014)
chr6 (27-65)||(26783256-26783294)
chr6 (27-65)||(26795228-26795266)
chr6 (24-70)||(28978171-28978217)
chr6 (155-188)||(26107058-26107091)
chr6 (155-188)||(26122290-26122323)
chr6 (29-66)||(27001888-27001925)
chr6 (29-66)||(27017394-27017431)
chr6 (27-59)||(27479243-27479275)
chr6 (27-59)||(27494497-27494529)
[»] chr8 (25 HSPs)
chr8 (12-188)||(3988044-3988220)
chr8 (12-197)||(4818464-4818646)
chr8 (93-197)||(19509881-19509984)
chr8 (116-183)||(4486943-4487010)
chr8 (93-183)||(40008356-40008445)
chr8 (117-188)||(3338233-3338304)
chr8 (93-176)||(15323160-15323243)
chr8 (93-176)||(15503529-15503612)
chr8 (12-70)||(4487050-4487108)
chr8 (22-70)||(6053839-6053887)
chr8 (22-70)||(31350114-31350162)
chr8 (22-70)||(31363914-31363962)
chr8 (22-70)||(44570411-44570459)
chr8 (24-65)||(3338351-3338392)
chr8 (93-176)||(21964399-21964481)
chr8 (24-59)||(31480581-31480616)
chr8 (24-59)||(31495727-31495762)
chr8 (23-70)||(40008468-40008515)
chr8 (24-70)||(19510006-19510052)
chr8 (117-183)||(31480461-31480527)
chr8 (117-183)||(31495607-31495673)
chr8 (155-196)||(19199072-19199113)
chr8 (155-196)||(19214127-19214168)
chr8 (24-65)||(28352840-28352881)
chr8 (24-65)||(28368025-28368066)
[»] chr2 (60 HSPs)
chr2 (12-188)||(13819714-13819894)
chr2 (24-188)||(34801653-34801816)
chr2 (93-188)||(15707009-15707103)
chr2 (93-188)||(34273592-34273688)
chr2 (93-188)||(34300599-34300695)
chr2 (93-197)||(37942489-37942592)
chr2 (93-188)||(27115037-27115132)
chr2 (93-188)||(27126002-27126097)
chr2 (93-188)||(16160061-16160155)
chr2 (93-188)||(16170962-16171056)
chr2 (93-188)||(27798066-27798160)
chr2 (93-188)||(27813155-27813249)
chr2 (94-188)||(16962835-16962928)
chr2 (93-188)||(35763153-35763248)
chr2 (91-188)||(39042495-39042593)
chr2 (91-188)||(39057829-39057927)
chr2 (91-183)||(19407156-19407248)
chr2 (91-183)||(19422156-19422248)
chr2 (117-173)||(19551916-19551972)
chr2 (117-188)||(34281257-34281328)
chr2 (117-188)||(37369402-37369473)
chr2 (117-188)||(37387236-37387307)
chr2 (91-197)||(12707191-12707297)
chr2 (91-197)||(12722591-12722697)
chr2 (93-188)||(34183775-34183871)
chr2 (12-70)||(34273518-34273576)
chr2 (12-70)||(34300525-34300583)
chr2 (93-188)||(5799946-5800042)
chr2 (93-188)||(31473008-31473104)
chr2 (117-188)||(251162-251233)
chr2 (117-188)||(266692-266763)
chr2 (93-176)||(4728621-4728704)
chr2 (117-188)||(10985637-10985708)
chr2 (12-70)||(15707124-15707183)
chr2 (91-188)||(22918816-22918913)
chr2 (91-188)||(22931926-22932023)
chr2 (24-65)||(37369314-37369355)
chr2 (12-70)||(16962946-16963005)
chr2 (15-70)||(27114964-27115019)
chr2 (15-70)||(27125929-27125984)
chr2 (93-152)||(28274391-28274450)
chr2 (24-61)||(251284-251321)
chr2 (24-61)||(266814-266851)
chr2 (24-61)||(13927382-13927419)
chr2 (24-61)||(13942578-13942615)
chr2 (24-61)||(19551828-19551865)
chr2 (24-65)||(34281169-34281210)
chr2 (24-65)||(37387148-37387189)
chr2 (112-188)||(13927260-13927336)
chr2 (112-188)||(13942456-13942532)
chr2 (23-70)||(27813086-27813133)
chr2 (23-70)||(16159992-16160039)
chr2 (23-70)||(16170893-16170940)
chr2 (24-59)||(16820108-16820143)
chr2 (24-59)||(16875330-16875365)
chr2 (93-176)||(19560925-19561007)
chr2 (23-70)||(27797997-27798044)
chr2 (15-70)||(31473121-31473176)
chr2 (12-66)||(37942620-37942674)
chr2 (29-66)||(35763091-35763128)
[»] scaffold0184 (2 HSPs)
scaffold0184 (93-188)||(24997-25092)
scaffold0184 (12-70)||(25113-25172)
[»] scaffold0078 (2 HSPs)
scaffold0078 (93-188)||(47752-47847)
scaffold0078 (12-70)||(47672-47731)
[»] scaffold0131 (1 HSPs)
scaffold0131 (13-197)||(23826-24008)
[»] scaffold0252 (1 HSPs)
scaffold0252 (12-188)||(1434-1607)
[»] scaffold0166 (1 HSPs)
scaffold0166 (24-188)||(28429-28592)
[»] scaffold0182 (2 HSPs)
scaffold0182 (93-188)||(3371-3465)
scaffold0182 (15-70)||(3294-3349)
[»] scaffold0062 (2 HSPs)
scaffold0062 (93-188)||(55921-56015)
scaffold0062 (12-70)||(56036-56095)
[»] scaffold0250 (1 HSPs)
scaffold0250 (12-188)||(127-302)
[»] chr1 (24 HSPs)
chr1 (93-188)||(47766795-47766891)
chr1 (117-197)||(10937755-10937835)
chr1 (117-197)||(10956946-10957026)
chr1 (117-197)||(10972169-10972249)
chr1 (91-183)||(41784002-41784094)
chr1 (91-183)||(41799270-41799362)
chr1 (91-188)||(16671584-16671682)
chr1 (12-70)||(47766721-47766779)
chr1 (22-70)||(47201122-47201170)
chr1 (25-70)||(47353794-47353839)
chr1 (91-188)||(14893936-14894033)
chr1 (93-176)||(15433069-15433151)
chr1 (117-188)||(30727971-30728042)
chr1 (24-61)||(10937667-10937704)
chr1 (24-61)||(10956858-10956895)
chr1 (24-61)||(10972081-10972118)
chr1 (24-61)||(13767923-13767960)
chr1 (24-65)||(28579144-28579185)
chr1 (24-65)||(28594570-28594611)
chr1 (112-188)||(13767799-13767875)
chr1 (93-188)||(36507362-36507458)
chr1 (25-70)||(16671519-16671565)
chr1 (24-65)||(36507298-36507340)
chr1 (32-65)||(30728089-30728122)
[»] scaffold1816 (2 HSPs)
scaffold1816 (117-188)||(790-861)
scaffold1816 (25-70)||(909-955)
[»] scaffold0289 (2 HSPs)
scaffold0289 (117-188)||(16369-16440)
scaffold0289 (24-65)||(16487-16528)
[»] scaffold0350 (1 HSPs)
scaffold0350 (91-183)||(13137-13229)
[»] scaffold1629 (1 HSPs)
scaffold1629 (91-183)||(759-852)
[»] scaffold1179 (1 HSPs)
scaffold1179 (93-188)||(1281-1377)
[»] scaffold1803 (1 HSPs)
scaffold1803 (93-182)||(1066-1156)
[»] scaffold1536 (1 HSPs)
scaffold1536 (22-70)||(693-741)
[»] scaffold0109 (2 HSPs)
scaffold0109 (93-185)||(15917-16009)
scaffold0109 (93-185)||(30159-30251)
[»] scaffold1760 (1 HSPs)
scaffold1760 (22-65)||(1083-1126)
[»] scaffold0418 (2 HSPs)
scaffold0418 (27-70)||(15532-15575)
scaffold0418 (93-130)||(15597-15634)
[»] scaffold0029 (1 HSPs)
scaffold0029 (97-176)||(6144-6223)
[»] scaffold0159 (1 HSPs)
scaffold0159 (91-188)||(16544-16641)
[»] scaffold0174 (1 HSPs)
scaffold0174 (93-176)||(7251-7333)
[»] scaffold0336 (2 HSPs)
scaffold0336 (93-188)||(2562-2658)
scaffold0336 (24-65)||(2496-2538)
[»] scaffold0027 (1 HSPs)
scaffold0027 (24-59)||(130382-130417)
[»] scaffold0603 (1 HSPs)
scaffold0603 (27-65)||(288-326)


Alignment Details
Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 34195124 - 34194939
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||    
T  34195124 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaaagatcaaaaaaattagtttcaaaaccgtacgaaaa 34195025  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34195024 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcgtttgatgt 34194939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 36321047 - 36320952
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  36321047 tttcaaaaccgtatgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcttgctggattcgtgtttagggttaaaggacgaatc 36320952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 36335256 - 36335161
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  36335256 tttcaaaaccgtatgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcttgctggattcgtgtttagggttaaaggacgaatc 36335161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 36350346 - 36350251
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  36350346 tttcaaaaccgtatgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcttgctggattcgtgtttagggttaaaggacgaatc 36350251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 14750203 - 14750132
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  14750203 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 14750132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 14769306 - 14769235
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  14769306 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 14769235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 19367500 - 19367571
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  19367500 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 19367571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 43150729 - 43150800
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  43150729 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 43150800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 48916556 - 48916627
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||| ||||    
T  48916556 agatctacgtcgtttcaagctgtgtatgagaaaataattgctggatccgtgtttagggttaaaggacgaatc 48916627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 762814 - 762743
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  ||| |||||||||||||||||||||||||| ||||    
T  762814 agatctacgtcgtttcaagctgtatttgaaaaaataattgttggattcgtgtttagggttaaaggacgaatc 762743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18791343 - 18791247
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  18791343 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 18791247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18805971 - 18805875
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  18805971 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 18805875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 20329177 - 20329082
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||  ||| |||||| |||||| ||||||||||||||| ||||| ||||   |||||||||||||||||||||||||||||| ||||    
T  20329177 tttcaaaaccgtat-aaagttttcaagatctatgtcgtttcaagctgtatttgaaaaaacaattgctggattcgtgtttagggttaaaggacgaatc 20329082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 20336206 - 20336111
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||  ||| |||||| |||||| ||||||||||||||| ||||| ||||   |||||||||||||||||||||||||||||| ||||    
T  20336206 tttcaaaaccgtat-aaagttttcaagatctatgtcgtttcaagctgtatttgaaaaaacaattgctggattcgtgtttagggttaaaggacgaatc 20336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 30747939 - 30747987
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30747939 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 30747987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 30763244 - 30763292
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30763244 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 30763292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 33664587 - 33664539
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33664587 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 33664539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 33675857 - 33675905
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33675857 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 33675905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 33683399 - 33683351
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33683399 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 33683351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 54827726 - 54827802
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| |||||||||||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  54827726 ttttaagatctacgtcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 54827802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 54842953 - 54843029
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| |||||||||||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  54842953 ttttaagatctacgtcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 54843029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35058358 - 35058300
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  35058358 cagagaagtaataagcgacgaaacgatgtagatccgtaacgatctaaacgttttctttc 35058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 5704052 - 5704137
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||| ||||||||||||||||| || |||| |||||||||  ||||| ||| ||||||||||||| |||||| ||||||| |||||    
T  5704052 ttttaagatctacgtcgtttcaggccgtgtatgagaaaataattgctagatccgtgtttagggttgaaggacgaatcgttagatgt 5704137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 14728727 - 14728798
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||| || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  14728727 agatctacgtcgtttcaagccgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 14728798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 762902 - 762861
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  762902 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 762861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14750291 - 14750250
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  14750291 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 14750250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14769394 - 14769353
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  14769394 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 14769353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 19367412 - 19367453
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  19367412 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 19367453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 43150640 - 43150681
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  43150640 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 43150681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 4565262 - 4565186
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  4565262 ttttaagatctatgtcgtttcaagccgtatttgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 4565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 46659112 - 46659195
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | ||||| |||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  46659112 tttcaaaaccgtatgaaaattcttagatcaacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 46659195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 4565346 - 4565309
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4565346 aaacgacgaaacgatgtagatctttaaagatctaaacg 4565309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 14728639 - 14728676
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  14728639 aaacgacgaaacgatgtagatctttaaagatctaaacg 14728676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 15377293 - 15377213
Alignment:
Q  95 tcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  15377293 tcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 15377213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 15401123 - 15401043
Alignment:
Q  95 tcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  15401123 tcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 15401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 48916469 - 48916506
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  48916469 aaacgacgaaacgatgtagatctttaaagatctaaacg 48916506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 15397227 - 15397145
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  ||   |||||||||||||||||    
T  15397227 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgtaagattcgtgtttagggtt 15397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 18711460 - 18711542
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||| ||||||||    
T  18711460 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgcttagggtt 18711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 18791417 - 18791362
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||| ||||| ||||||||||||||||| | || |||||||||||||| ||||    
T  18791417 agaagtgctaaacaacgaaacgatgtagatcttcaaggatctaaacgttttatttc 18791362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 18806045 - 18805990
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||| ||||| ||||||||||||||||| | || |||||||||||||| ||||    
T  18806045 agaagtgctaaacaacgaaacgatgtagatcttcaaggatctaaacgttttatttc 18805990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 20756164 - 20756246
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  ||   |||||||||||||||||    
T  20756164 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgtcagattcgtgtttagggtt 20756246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 54827644 - 54827683
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtt 63  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  54827644 aaacgtcgaaacgatgtagatctttaaagatctaaacgtt 54827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 54842871 - 54842910
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtt 63  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  54842871 aaacgtcgaaacgatgtagatctttaaagatctaaacgtt 54842910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 1e-61; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 27282713 - 27282897
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                   |||||||||||||||||||||||    
T  27282713 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttcttt-taaaaaagatcaaaaaaattagtttcaaaaccgtacgaaaa 27282811  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27282812 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcgtttgatgt 27282897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 26772475 - 26772651
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||    
T  26772475 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaaagatcaaaaaaattagtttcaaaaccgtacgaaaa 26772574  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26772575 ttttcagatctacgtcgtttcaagcagtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 26772651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 15649502 - 15649326
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||                  | | |||||||||||||||||||    
T  15649502 cagagaagtaacaaacgacgaaacgatgtagatccttgaagatctaaacgttctctttcaaaaaaaaatcaaaaaaatcaatttcaaaaccgtacgaaaa 15649403  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15649402 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 15649326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 15664878 - 15664702
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||                  | | |||||||||||||||||||    
T  15664878 cagagaagtaacaaacgacgaaacgatgtagatccttgaagatctaaacgttctctttcaaaaaaaaatcaaaaaaatcaatttcaaaaccgtacgaaaa 15664779  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15664778 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 15664702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 26767948 - 26768047
Alignment:
Q  89 ttagtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26767948 ttagtttcaaaaccgtacgaagattttccgatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 26768047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 24786209 - 24786046
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaattttcagatcta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||                  | | |||||||||||||||||||||||||||||||    
T  24786209 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaagaaatcaaaaaag-tcaatttcaaaaccgtacgaaaattttcagatcta 24786111  T
Q  124 cgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||    
T  24786110 cgtcgtttcaagctgtgtatgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 24786046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 29892716 - 29892613
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||    
T  29892716 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcattt 29892618  T
Q  193 gatgt 197  Q
    |||||    
T  29892617 gatgt 29892613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 42137117 - 42137211
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  42137117 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaatcattgctggattcgtgtttagggttaaaggacgaatc 42137211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 28643372 - 28643475
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    ||||||||||||||||| |||| ||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  28643372 tttcaaaaccgtacgaagattt-cagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 28643470  T
Q  193 gatgt 197  Q
    |||||    
T  28643471 gatgt 28643475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 28658777 - 28658879
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||   |||||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  28658777 tttcaaaaccgtacgaag--tttcagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 28658874  T
Q  193 gatgt 197  Q
    |||||    
T  28658875 gatgt 28658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 12056501 - 12056430
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  12056501 agatctacgtcgtttcaagctgtatttgagaaattccttgctggattcgtgtttagggttaaaggacgaatc 12056430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 13433273 - 13433176
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| |||||||||||||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  13433273 agtttcaaaaccgtacggaactttttagatctacgtcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 13433176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 13444167 - 13444070
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| |||||||||||||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  13444167 agtttcaaaaccgtacggaactttttagatctacgtcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 13444070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 42065346 - 42065290
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  42065346 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctt 42065290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 28572784 - 28572855
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| || ||  |||||||||||||||||||||||||||||| ||||    
T  28572784 agatctacgtcgtttcaagctgtatttgaaaagataattgctggattcgtgtttagggttaaaggacgaatc 28572855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 28912574 - 28912672
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| | || ||||| || ||   ||||||||||||||||||||||||||||| ||||    
T  28912574 agtttcaaaaccgtacggaaattttttagatctacgtcgtttcaaaccgtatttgaaaagataactgctggattcgtgtttagggttaaaggacgaatc 28912672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 28927842 - 28927940
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| | || ||||| || ||   ||||||||||||||||||||||||||||| ||||    
T  28927842 agtttcaaaaccgtacggaaattttttagatctacgtcgtttcaaaccgtatttgaaaagataactgctggattcgtgtttagggttaaaggacgaatc 28927940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18491337 - 18491241
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  18491337 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 18491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18506652 - 18506556
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  18506652 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 18506556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 32586956 - 32586864
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||  || |||| |||||||||||||||||||| || ||| | ||||    |||||||||||||||||||||||||||||    
T  32586956 agtttcaaaaccgtacagaactttttagatctacgtcgtttcaagccgtatttaaaaaaacaactgctggattcgtgtttagggttaaaggac 32586864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 32605385 - 32605293
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||  || |||| |||||||||||||||||||| || ||| | ||||    |||||||||||||||||||||||||||||    
T  32605385 agtttcaaaaccgtacataactttttagatctacgtcgtttcaagccgtatttaaaaaaacaactgctggattcgtgtttagggttaaaggac 32605293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 37662173 - 37662125
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37662173 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 37662125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 37677456 - 37677408
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37677456 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 37677408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 43087779 - 43087875
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  43087779 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 43087875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 37726298 - 37726369
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  37726298 agatctacgtcgtttcaagctgaatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 37726369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 24675596 - 24675702
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| ||||| || ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  24675596 agtttcaaaaccgcacggaactttttagatcaacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 24675695  T
Q  191 ttgatgt 197  Q
    |||||||    
T  24675696 ttgatgt 24675702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 24718123 - 24718229
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| ||||| || ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  24718123 agtttcaaaaccgcacggaactttttagatcaacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 24718222  T
Q  191 ttgatgt 197  Q
    |||||||    
T  24718223 ttgatgt 24718229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 24733583 - 24733689
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| ||||| || ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  24733583 agtttcaaaaccgcacggaactttttagatcaacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 24733682  T
Q  191 ttgatgt 197  Q
    |||||||    
T  24733683 ttgatgt 24733689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 5632318 - 5632415
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  5632318 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 5632415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 5647192 - 5647289
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  5647192 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 5647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 30143994 - 30144091
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  30143994 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 30144091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 30178044 - 30178141
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  30178044 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 30178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 13315470 - 13315422
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13315470 ataaacgacgaaacgatgtagatccgtaaagatctaaacgtttcctttc 13315422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 13330797 - 13330749
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13330797 ataaacgacgaaacgatgtagatccgtaaagatctaaacgtttcctttc 13330749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31425607 - 31425655
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31425607 ataaacgacgaaacgatgtagatccgtaaagatctaaacgtttcctttc 31425655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31440945 - 31440993
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31440945 ataaacgacgaaacgatgtagatccgtaaagatctaaacgtttcctttc 31440993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 43072492 - 43072588
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  || || |||||   ||||||||||||||||||||||||||||| ||||    
T  43072492 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaattcgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 43072588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 15749596 - 15749525
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| | | || ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  15749596 agatctacgtcgtttcgaaccgtatttgaaaaaatagttgctggattcgtgtttagggttaaaggacgaatc 15749525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 15764824 - 15764753
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| | | || ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  15764824 agatctacgtcgtttcgaaccgtatttgaaaaaatagttgctggattcgtgtttagggttaaaggacgaatc 15764753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 22989873 - 22989790
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  22989873 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 22989790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 29892799 - 29892746
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  29892799 cagaaaagagataaacgacgaaacgatgtagatccgtaaagatctaaacctttt 29892746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 12056587 - 12056548
Alignment:
Q  26 acgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12056587 acgacgaaacgatgtagatctttaaagatctaaacgtttt 12056548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 37649727 - 37649806
Alignment:
Q  97 aaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||| ||||||| || ||||||| |||||||||||  |||||| |||||||  || ||||||| |||||||||||    
T  37649727 aaaaccgtatgaaaattctccgatctacatcgtttcaagccttgtttgtgaaaatcagtgttggattcatgtttagggtt 37649806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 42137048 - 42137095
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  42137048 taaacggcgaaacgatgtagatccgtaaagatctaaaccttttctttc 42137095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 3783730 - 3783767
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  3783730 aaacgacgaaacgatgtagatctttaaagatctaaacg 3783767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 3799085 - 3799122
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  3799085 aaacgacgaaacgatgtagatctttaaagatctaaacg 3799122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 28572696 - 28572737
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  28572696 aaacgacgaaacgatgtagatctttatagatctaaacgtttt 28572737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 3783815 - 3783891
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| ||  |||| ||||    ||||||||||||||||||||||||||||| ||||    
T  3783815 ttttaagatctatgtcgtttcaagccgtaattgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 3783891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 3799170 - 3799246
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| ||  |||| ||||    ||||||||||||||||||||||||||||| ||||    
T  3799170 ttttaagatctatgtcgtttcaagccgtaattgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 3799246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 23004928 - 23004857
Alignment:
Q  105 acgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  23004928 acgaaaattctctgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 23004857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 29973057 - 29973022
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  29973057 aaacgacgaaacgatgtagatctttaaagatctaaa 29973022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 30023586 - 30023621
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  30023586 aaacgacgaaacgatgtagatctttaaagatctaaa 30023621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 30038850 - 30038885
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  30038850 aaacgacgaaacgatgtagatctttaaagatctaaa 30038885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 33510568 - 33510603
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  33510568 aaacgacgaaacgatgtagatctttaaagatctaaa 33510603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 33525831 - 33525866
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  33525831 aaacgacgaaacgatgtagatctttaaagatctaaa 33525866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 28912509 - 28912555
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaa-gatctaaacgttttctttc 70  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  28912509 aacgacgaaacgatgtagatctttaaacgatctaaacgtttcctttc 28912555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 28927777 - 28927823
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaa-gatctaaacgttttctttc 70  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  28927777 aacgacgaaacgatgtagatctttaaacgatctaaacgtttcctttc 28927823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 6868711 - 6868752
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  6868711 tgctggattcgtgtttagggttaaaggacgaattgattgatg 6868752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 6883835 - 6883876
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  6883835 tgctggattcgtgtttagggttaaaggacgaattgattgatg 6883876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 37726211 - 37726248
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  37726211 aaacgacaaaacgatgtagatctttaaagatctaaacg 37726248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 2505162 - 2505194
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaa 59  Q
    ||||||||||||||||||| |||||||||||||    
T  2505162 cgacgaaacgatgtagatctttaaagatctaaa 2505194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 2520482 - 2520514
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaa 59  Q
    ||||||||||||||||||| |||||||||||||    
T  2520482 cgacgaaacgatgtagatctttaaagatctaaa 2520514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 23832419 - 23832235
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||| ||||| |    
T  23832419 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaagatcaaaaaaa-ttagtttcaaaaccgcacgaaga 23832321  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23832320 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcgtttgatgt 23832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 39351654 - 39351471
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||                  ||||||||||||||||||||| |    
T  39351654 cagagaagtgatgaacgacgaaacgatgtagatccttaaaggtataaacgttttctttcaaaaaagatcaaaaaa--ttagtttcaaaaccgtacgaaga 39351557  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39351556 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcgtttgatgt 39351471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 5134608 - 5134505
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  5134608 tttcaaaaccgtacgaaaattt-cagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 5134510  T
Q  193 gatgt 197  Q
    |||||    
T  5134509 gatgt 5134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 5151202 - 5151099
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  5151202 tttcaaaaccgtacgaaaattt-cagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 5151104  T
Q  193 gatgt 197  Q
    |||||    
T  5151103 gatgt 5151099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 16161376 - 16161479
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||    
T  16161376 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcattt 16161474  T
Q  193 gatgt 197  Q
    |||||    
T  16161475 gatgt 16161479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 4273819 - 4273916
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| | || ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  4273819 agtttcaaaaccgtacggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 4273916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 17241933 - 17242030
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| ||  ||||||||||||| || ||||||||||| ||||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  17241933 agtttcaaaaccgtacaaagtttttcagatctacatcatttcaagctgtatttgagaaatttcttgatagattcgtgtttagggttaaaggacgaatc 17242030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 26522301 - 26522407
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| |||||||| ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  26522301 agtttcaaaaccgcacggaactttttagatctacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 26522400  T
Q  191 ttgatgt 197  Q
    |||||||    
T  26522401 ttgatgt 26522407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 32999163 - 32999071
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||  || |||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  32999163 agtttcaaaaccgtacagaactttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 32999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 11027703 - 11027632
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  11027703 agatctacgtcgtttcaagctgaatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 11027632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 26498764 - 26498693
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||| || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  26498764 agatctacgtcgtttcaagccgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 26498693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 16161285 - 16161338
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  16161285 cagaaaagagataaacgacgaaacgatgtagatccgtaaagatctaaacctttt 16161338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 26599265 - 26599336
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||  | ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  26599265 agatctacgtcgtttcaagccttatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 26599336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 26696318 - 26696421
Alignment:
Q  94 ttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||| |||||||| |||||| ||||||||| ||||||| | |||  ||||| ||||    ||||||||||||||||||||||||||||| ||| | ||    
T  26696318 ttcaaagccgtacgacaaatttccagatctacatcgtttcgaactgaatttgaaaaaacaactgctggattcgtgtttagggttaaaggacgaattgatt 26696417  T
Q  193 gatg 196  Q
    ||||    
T  26696418 gatg 26696421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 31119274 - 31119365
Alignment:
Q  97 aaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  31119274 aaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 31119365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 31133449 - 31133540
Alignment:
Q  97 aaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  31133449 aaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 31133540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 26498852 - 26498815
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26498852 aaacgacgaaacgatgtagatctttaaagatctaaacg 26498815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 26599177 - 26599214
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26599177 aaacgacgaaacgatgtagatctttaaagatctaaacg 26599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 26660610 - 26660513
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| | || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  26660610 agtttcaaaaccgtatggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 26660513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 26675803 - 26675706
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| | || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  26675803 agtttcaaaaccgtatggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 26675706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 26685940 - 26685843
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| | || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  26685940 agtttcaaaaccgtatggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 26685843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 26689481 - 26689384
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| | || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  26689481 agtttcaaaaccgtatggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 26689384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 4135962 - 4135921
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  4135962 tgctggattcgtgtttagggttaaaggacgaattgattgatg 4135921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 4150888 - 4150847
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  4150888 tgctggattcgtgtttagggttaaaggacgaattgattgatg 4150847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 11027794 - 11027757
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  11027794 aaacgacaaaacgatgtagatctttaaagatctaaacg 11027757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 17241873 - 17241910
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  17241873 acgaaacgatgtagattcttaaagatccaaacgttttc 17241910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 1e-58; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 17903627 - 17903811
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||| ||||| |    
T  17903627 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaagatcaaaaaaa-ttagtttcaaaaccgcacgaaga 17903725  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17903726 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcgtttgatgt 17903811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 22119598 - 22119503
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22119598 tttcaaaaccgtacgaaaattttcagatctacatcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 22119503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 18236859 - 18236962
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    ||||||||||||||||||| || ||||||||| |||| |||||| ||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  18236859 tttcaaaaccgtacgaaaaatt-cagatctacatcgtatcaagccgtgttcgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 18236957  T
Q  193 gatgt 197  Q
    |||||    
T  18236958 gatgt 18236962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 18252216 - 18252319
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    ||||||||||||||||||| || ||||||||| |||| |||||| ||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  18252216 tttcaaaaccgtacgaaaaatt-cagatctacatcgtatcaagccgtgttcgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 18252314  T
Q  193 gatgt 197  Q
    |||||    
T  18252315 gatgt 18252319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 8206006 - 8206100
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  8206006 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 8206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 8221175 - 8221269
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  8221175 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagccgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 8221269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 43716898 - 43716992
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  43716898 tttcaaaaccatacgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 43716992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 47197198 - 47197102
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||    
T  47197198 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgaaaaaatatttgctggattcgtgtttagcgttaaaggacgaatc 47197102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 5709647 - 5709741
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  5709647 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 5709741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 5720557 - 5720651
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  5720557 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 5720651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 5731460 - 5731554
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  5731460 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 5731554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 5760908 - 5760814
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  5760908 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 5760814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 10388223 - 10388294
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  10388223 agatctacgtcgtttcaagctgtgtttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 10388294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 10405596 - 10405667
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  10405596 agatctacgtcgtttcaagctgtgtttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 10405667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18283096 - 18283025
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  18283096 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 18283025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18298397 - 18298326
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  18298397 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 18298326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18313698 - 18313627
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  18313698 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 18313627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 26427398 - 26427469
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  26427398 agatctacgtcgtttcaagctgtgtttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 26427469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 5007896 - 5007988
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  5007896 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 5007988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 5023155 - 5023247
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  5023155 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 5023247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 5600126 - 5600070
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagg 173  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5600126 agatctacgtcgtttcaagctgtgtatgagaaaatcattgctggattcgtgtttagg 5600070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 5615367 - 5615311
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagg 173  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5615367 agatctacgtcgtttcaagctgtgtatgagaaaatcattgctggattcgtgtttagg 5615311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 28106770 - 28106678
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||| || |||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  28106770 agtttcaaaaccgtacggaactttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 28106678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 28122006 - 28121914
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||| || |||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  28122006 agtttcaaaaccgtacggaactttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 28121914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29139526 - 29139470
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29139526 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctt 29139470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29154331 - 29154275
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29154331 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctt 29154275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 26680552 - 26680481
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| ||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  26680552 agatctatgtcgtttcaagctgtatttgaaaaaatggttgctggattcgtgtttagggttaaaggacgaatc 26680481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 47197272 - 47197214
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47197272 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 47197214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 16401253 - 16401205
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16401253 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 16401205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 24322289 - 24322337
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24322289 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 24322337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 24337641 - 24337689
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24337641 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 24337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 22491479 - 22491545
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||| |||||||||||| ||||| |||||  |||||||||||||||| |||||||||||||    
T  22491479 agatctacgttgtttcaagctgtatttgaaaaaataattgctggattcgtgttcagggttaaaggac 22491545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 28333498 - 28333596
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| ||  ||||| |||||||| || ||||||||||| ||||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  28333498 agtttcaaaaccgtacaaagtttttccagatctacatcatttcaagctgtatttgagaaatttcttgatagattcgtgtttagggttaaaggacgaatc 28333596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 28348600 - 28348698
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| ||  ||||| |||||||| || ||||||||||| ||||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  28348600 agtttcaaaaccgtacaaagtttttccagatctacatcatttcaagctgtatttgagaaatttcttgatagattcgtgtttagggttaaaggacgaatc 28348698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 6533498 - 6533397
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  6533498 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 6533399  T
Q  192 tg 193  Q
    ||    
T  6533398 tg 6533397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 6547329 - 6547228
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  6547329 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 6547230  T
Q  192 tg 193  Q
    ||    
T  6547229 tg 6547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 26295294 - 26295391
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  26295294 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttaaaggacgaatc 26295391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 4731101 - 4731184
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  4731101 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 4731184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 6186599 - 6186682
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  6186599 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 6186682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 6211368 - 6211451
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  6211368 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 6211451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 6226639 - 6226710
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||| ||| |||||||| ||||| |||||  ||||||||||||||||||||| |||||||| ||||    
T  6226639 agatctacgttgttccaagctgtatttgaaaaaataattgctggattcgtgtttagggataaaggacgaatc 6226710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 18324943 - 18325026
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  18324943 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 18325026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 18340040 - 18340123
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  18340040 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 18340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 22119678 - 22119619
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatcctt-aaagatctaaacgttttctttc 70  Q
    |||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  22119678 cagaaaagagataaacgacgaagcgatgtagatccttaaaagatctaaacgttttctttc 22119619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 48460127 - 48460218
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||| | |||||   |||||||||||||||||||||||||||||    
T  48460127 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttaaaaaaatgactgctggattcgtgtttagggttaaaggac 48460218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 48475886 - 48475977
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||| | |||||   |||||||||||||||||||||||||||||    
T  48475886 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttaaaaaaatgactgctggattcgtgtttagggttaaaggac 48475977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 4715922 - 4716004
Alignment:
Q  94 ttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    |||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  4715922 ttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 4716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 10388135 - 10388176
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  10388135 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 10388176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 10405508 - 10405549
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  10405508 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 10405549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 18283177 - 18283136
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  18283177 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 18283136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 18298478 - 18298437
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  18298478 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 18298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 18313779 - 18313738
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  18313779 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 18313738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 26427308 - 26427349
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  26427308 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 26427349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 50140098 - 50140001
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  50140098 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 50140001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 6226552 - 6226592
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  6226552 aacgacgaaacgatgtagatctttaaagatctaaacgtttt 6226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 22491391 - 22491431
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  22491391 aacgacgaaacgatgtagatctttaaagatctaaacgtttt 22491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 29656346 - 29656275
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||  || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  29656346 agatctacgtcgtttcaagtcgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 29656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 26684671 - 26684717
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaa 58  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||    
T  26684671 cagagaagtaataaacaacgaaacgatgtagatccgtaaagatctaa 26684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 29670990 - 29670924
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||||||||  || ||||| ||||    |||||||||||||||||||||||||||||    
T  29670990 agatctacgtcgtttcaagtcgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggac 29670924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 6533564 - 6533523
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  6533564 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 6533523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 6547395 - 6547354
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  6547395 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 6547354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 29656434 - 29656397
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29656434 aaacgacgaaacgatgtagatctttaaagatctaaacg 29656397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 29671078 - 29671041
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29671078 aaacgacgaaacgatgtagatctttaaagatctaaacg 29671041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 5600214 - 5600178
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaac 60  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5600214 aaacgacgaaacgatgtagatctttaaagatctaaac 5600178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 5615455 - 5615419
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaac 60  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5615455 aaacgacgaaacgatgtagatctttaaagatctaaac 5615419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 5709578 - 5709625
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  5709578 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 5709625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 5720488 - 5720535
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  5720488 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 5720535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 5731391 - 5731438
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  5731391 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 5731438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 5760977 - 5760930
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  5760977 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 5760930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 8205936 - 8205983
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| || ||||||||||||||| ||||||||||||| |||||||||    
T  8205936 taaacaacaaaacgatgtagatccgtaaagatctaaaccttttctttc 8205983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 8221105 - 8221152
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| || ||||||||||||||| ||||||||||||| |||||||||    
T  8221105 taaacaacaaaacgatgtagatccgtaaagatctaaaccttttctttc 8221152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 17975503 - 17975468
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  17975503 aaacgacgaaacgatgtagatctttaaagatctaaa 17975468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 17991051 - 17991016
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  17991051 aaacgacgaaacgatgtagatctttaaagatctaaa 17991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 18219343 - 18219378
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  18219343 aaacgacgaaacgatgtagatctttaaagatctaaa 18219378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 18234651 - 18234686
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  18234651 aaacgacgaaacgatgtagatctttaaagatctaaa 18234686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 26680641 - 26680602
Alignment:
Q  26 acgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  26680641 acgacgaaacgatgtagatctttaaagatctaagcgtttt 26680602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 36132583 - 36132501
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||| ||||||||||||    
T  36132583 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagatttgtgtttagggtt 36132501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 43716828 - 43716875
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||| ||||||||||| ||||||||||||| |||||||||    
T  43716828 taaacaacgaaatgatgtagatccgtaaagatctaaaccttttctttc 43716875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 28333438 - 28333475
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  28333438 acgaaacgatgtagattcttaaagatccaaacgttttc 28333475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 28348540 - 28348577
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  28348540 acgaaacgatgtagattcttaaagatccaaacgttttc 28348577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 51776451 - 51776492
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  51776451 tgctggattcgtgtttagggttaaaggacgaattgattgatg 51776492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 51791537 - 51791578
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  51791537 tgctggattcgtgtttagggttaaaggacgaattgattgatg 51791578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 16997103 - 16997281
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnn--ttagtttcaaaaccgtacgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||                    |||||||||||||||||||||    
T  16997103 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacgttttctttcaaaaaaaaagatcaaaaaaattagtttcaaaaccgtacgaa 16997202  T
Q  110 aattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16997203 gattttccgatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 16997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 27308334 - 27308157
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnn-ttagtttcaaaaccgtacgaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||                   |||||||||||||||||||||     
T  27308334 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctttcaaaaaaaaagatcaaaaaattagtttcaaaaccgtacgaag 27308235  T
Q  111 attttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27308234 attttccgatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttagaggacgaatc 27308157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 27212222 - 27212399
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnn-ttagtttcaaaaccgtacgaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||                   |||||||||||||||||||||     
T  27212222 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctttcaaaaaaaaagatcaaaaaattagtttcaaaaccgtacgaag 27212321  T
Q  111 attttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  27212322 attttccgatctacatcgtttcaagctgtgttcgagaaaatctttgctggattcgtgtttagggttagaggacgaatc 27212399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 27237006 - 27236829
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnn-ttagtttcaaaaccgtacgaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||                   |||||||||||||||||||||     
T  27237006 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacattttctttcaaaaaaaaagatcaaaaaattagtttcaaaaccgtacgaag 27236907  T
Q  111 attttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  27236906 attttccgatctacatcgtttcaagctgtgttcgagaaaatctttgctggattcgtgtttagggttagaggacgaatc 27236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 34455067 - 34454972
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||    
T  34455067 tttcaaaaccgtacggaaattttcagatctacgtcgtttcaagctgtgtatgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 34454972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 34469355 - 34469260
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||    
T  34469355 tttcaaaaccgtacggaaattttcagatctacgtcgtttcaagctgtgtatgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 34469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 27191930 - 27192021
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27191930 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 27192021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 27203783 - 27203874
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27203783 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 27203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 27245448 - 27245357
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27245448 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 27245357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 27257311 - 27257220
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27257311 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 27257220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 29495575 - 29495678
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| ||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  29495575 tttcaaaaccgtacgaaaattt-cagatctacatcgtatcaagccgtgttcgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 29495673  T
Q  193 gatgt 197  Q
    |||||    
T  29495674 gatgt 29495678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 29510913 - 29511016
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| ||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  29510913 tttcaaaaccgtacgaaaattt-cagatctacatcgtatcaagccgtgttcgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 29511011  T
Q  193 gatgt 197  Q
    |||||    
T  29511012 gatgt 29511016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 2650880 - 2650786
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  2650880 tttcaaaaccgtacgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 2650786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 4453032 - 4453127
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  4453032 tttcaagaccgtacgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcttgctggattcgtgtttagggttaaaggacgaatc 4453127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 28978153 - 28978058
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  28978153 tttcaagaccgtacgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcttgctggattcgtgtttagggttaaaggacgaatc 28978058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 27620027 - 27619931
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcg 189  Q
    ||||||||||||| ||||| ||| ||||||||||||||||| || || ||||| |||||  |||||||||||||||||||||||||||||| |||||    
T  27620027 tttcaaaaccgtatgaaaagttttagatctacgtcgtttcaggccgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatcg 27619931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 27635637 - 27635541
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcg 189  Q
    ||||||||||||| ||||| ||| ||||||||||||||||| || || ||||| |||||  |||||||||||||||||||||||||||||| |||||    
T  27635637 tttcaaaaccgtatgaaaagttttagatctacgtcgtttcaggccgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatcg 27635541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 16563836 - 16563916
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||| |||||||||||||||||||| ||||||| |||||    
T  16563836 agatctacgtcgtttcaggctgtgtatgagaaaataattgctggatccgtgtttagggttaaaggacgaatcgttagatgt 16563916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 29559131 - 29559202
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  29559131 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 29559202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 31544922 - 31544993
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  31544922 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 31544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 29543721 - 29543792
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||| ||||||||||||||||||| ||||    
T  29543721 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggatttgtgtttagggttaaaggacgaatc 29543792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 27191856 - 27191914
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27191856 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 27191914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 27203709 - 27203767
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27203709 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 27203767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27245522 - 27245464
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27245522 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 27245464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27257385 - 27257327
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27257385 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 27257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 29582580 - 29582686
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| |||||||| ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  29582580 agtttcaaaaccgcacggaactttttagatctacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 29582679  T
Q  191 ttgatgt 197  Q
    |||||||    
T  29582680 ttgatgt 29582686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 16668377 - 16668473
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  16668377 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 16668473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 16683659 - 16683755
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  16683659 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 16683755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 29567173 - 29567280
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctt-tgctggattcgtgtttagggttaaaggacaaatcg 189  Q
    ||||||||||||| ||| || |||| |||||||| ||||||||| | || ||||| |||| |   |||||||||||||||||||||| |||||| |||||    
T  29567173 agtttcaaaaccgcacggaactttttagatctacatcgtttcaaaccgtatttgaaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcg 29567272  T
Q  190 tttgatgt 197  Q
    ||||||||    
T  29567273 tttgatgt 29567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 4753423 - 4753322
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  4753423 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 4753324  T
Q  192 tg 193  Q
    ||    
T  4753323 tg 4753322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 4767212 - 4767313
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  4767212 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 4767311  T
Q  192 tg 193  Q
    ||    
T  4767312 tg 4767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 4782369 - 4782470
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  4782369 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 4782468  T
Q  192 tg 193  Q
    ||    
T  4782469 tg 4782470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 4785951 - 4785850
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtt 191  Q
    ||||||||||||| ||   |||||| ||||||||||||||||| |||  |||||  ||||  |||||||||||||||||||||||||||||| |||| ||    
T  4785951 tttcaaaaccgtatgagttttttcaagatctacgtcgtttcaaactgattttgaagaaataattgctggattcgtgtttagggttaaaggacgaatcatt 4785852  T
Q  192 tg 193  Q
    ||    
T  4785851 tg 4785850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 34455132 - 34455089
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  34455132 cgacgaaacgatgtagatccttaaggatctaaacgttttctttc 34455089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 34469420 - 34469377
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  34469420 cgacgaaacgatgtagatccttaaggatctaaacgttttctttc 34469377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27001947 - 27002045
Alignment:
Q  91 agtttcaaaaccgtacgaaaatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| ||  |||| ||||||||| ||  |||||||||| ||||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  27001947 agtttcaaaaccgtacaaagttttttcagatctacatcacttcaagctgtatttgagaaatttcttgatagattcgtgtttagggttaaaggacgaatc 27002045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27017453 - 27017551
Alignment:
Q  91 agtttcaaaaccgtacgaaaatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| ||  |||| ||||||||| ||  |||||||||| ||||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  27017453 agtttcaaaaccgtacaaagttttttcagatctacatcacttcaagctgtatttgagaaatttcttgatagattcgtgtttagggttaaaggacgaatc 27017551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 29543632 - 29543673
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  29543632 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 29543673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 29559042 - 29559083
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  29559042 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 29559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 31544833 - 31544874
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  31544833 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 31544874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27038639 - 27038735
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| || |||| |||||||| ||||||||| |||  ||| | |||||   ||||||||||||||||||||||||||||| ||||    
T  27038639 tttcaaagccgtacgacaagtttccagatctacatcgtttcaaactgaatttaaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 27038735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27066978 - 27067074
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| || |||| |||||||| ||||||||| |||  ||| | |||||   ||||||||||||||||||||||||||||| ||||    
T  27066978 tttcaaagccgtacgacaagtttccagatctacatcgtttcaaactgaatttaaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 27067074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 4519565 - 4519668
Alignment:
Q  94 ttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||| |||||||| |||||| ||||||||| ||||||| |  ||  ||||| ||||   |||||||||||||||||||||||||||||| ||| | ||    
T  4519565 ttcaaagccgtacgacaaatttccagatctacatcgtttcgaattgaatttgaaaaaacaattgctggattcgtgtttagggttaaaggacgaattgatt 4519664  T
Q  193 gatg 196  Q
    ||||    
T  4519665 gatg 4519668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 4534752 - 4534855
Alignment:
Q  94 ttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||| |||||||| |||||| ||||||||| ||||||| |  ||  ||||| ||||   |||||||||||||||||||||||||||||| ||| | ||    
T  4534752 ttcaaagccgtacgacaaatttccagatctacatcgtttcgaattgaatttgaaaaaacaattgctggattcgtgtttagggttaaaggacgaattgatt 4534851  T
Q  193 gatg 196  Q
    ||||    
T  4534852 gatg 4534855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 18939347 - 18939430
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||  | ||||| || |||||||||||||||||||| |||||| |||||||  ||   |||||||||||||||||    
T  18939347 tttcaaaaccgtttggaaattctccgatctacgtcgtttcaagctttgtttgcgaaaatcaatgtcagattcgtgtttagggtt 18939430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 27620091 - 27620045
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  27620091 aaacaacgaaacgatgtagatctttaaagatctaaacgttttatttc 27620045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 27635701 - 27635655
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  27635701 aaacaacgaaacgatgtagatctttaaagatctaaacgttttatttc 27635655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 4753489 - 4753448
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  4753489 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 4753448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 4767148 - 4767189
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  4767148 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 4767189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 4782303 - 4782344
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  4782303 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 4782344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 4786015 - 4785974
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  4786015 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 4785974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 2650950 - 2650903
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||||    
T  2650950 taaacaacgaaacgatgtagatccgtaaagatctagaccttttctttc 2650903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 7986772 - 7986807
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  7986772 aaacgacgaaacgatgtagatctttaaagatctaaa 7986807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 30548761 - 30548726
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  30548761 aaacgacgaaacgatgtagatctttaaagatctaaa 30548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 30564026 - 30563991
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  30564026 aaacgacgaaacgatgtagatctttaaagatctaaa 30563991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 4452968 - 4453014
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||| | || |||||||||||||| ||||    
T  4452968 aaacgacgaaacgatgtagatcttcaaggatctaaacgttttatttc 4453014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 26783256 - 26783294
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  26783256 cgacgaaacgatgtagatctttaaagatctaaatgtttt 26783294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 26795228 - 26795266
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  26795228 cgacgaaacgatgtagatctttaaagatctaaatgtttt 26795266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 28978217 - 28978171
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||| | || |||||||||||||| ||||    
T  28978217 aaacgacgaaacgatgtagatcttcaaggatctaaacgttttatttc 28978171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 26107091 - 26107058
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  26107091 tgctggattcgtgtttagggttaaaggacgaatc 26107058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 26122323 - 26122290
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  26122323 tgctggattcgtgtttagggttaaaggacgaatc 26122290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 27001888 - 27001925
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27001888 acgaaacgatgtagattcttaaagatccaaacgttttc 27001925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 27017394 - 27017431
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27017394 acgaaacgatgtagattcttaaagatccaaacgttttc 27017431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 27479243 - 27479275
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaa 59  Q
    ||||||||||||||||||| |||||||||||||    
T  27479243 cgacgaaacgatgtagatctttaaagatctaaa 27479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 27494497 - 27494529
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaa 59  Q
    ||||||||||||||||||| |||||||||||||    
T  27494497 cgacgaaacgatgtagatctttaaagatctaaa 27494529  T

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Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 3988044 - 3988220
Alignment:
Q  12 cagagaagtgataaa-cgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaa 110  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||                  | | ||||| ||||||||||||    
T  3988044 cagagaagtaataaaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaaatcaaaaaaaa-tcaatttcagaaccgtacgaaa 3988142  T
Q  111 attttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3988143 attttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 3988220  T

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Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 4818646 - 4818464
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||                  | ||||||||||||||| |||      
T  4818646 cagaaaagagataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaatcaaaaaaa----tcagtttcaaaaccgtatgaagt 4818551  T
Q  112 tttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||| | ||||||    
T  4818550 tttttcagatctacgtcgtttcaagctgtgtttgaaaaaacctttgctggattcgtgtttagggttaaaggacgaatcatctgatgt 4818464  T

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Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 19509984 - 19509881
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| |||||||| |||||  |||||||||||||||||||||||||||||| ||||||||    
T  19509984 tttcaaaaccgtacgaaaatttt-agatctacatcgtatcaagccgtgtttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 19509886  T
Q  193 gatgt 197  Q
    |||||    
T  19509885 gatgt 19509881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 4487010 - 4486943
Alignment:
Q  116 cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4487010 cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggctaaaggac 4486943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 40008445 - 40008356
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  40008445 tttcaaaaccgtatgaaa-ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggac 40008356  T

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Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 3338304 - 3338233
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||| || ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  3338304 agatctacgtcgtttcaagccgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 3338233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 15323160 - 15323243
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||||||| |||||  ||||||| ||| ||||||| |||||||||||    
T  15323160 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaagctttgtttatgaaaatcattgttggattcatgtttagggtt 15323243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 15503529 - 15503612
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||||||| |||||  ||||||| ||| ||||||| |||||||||||    
T  15503529 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaagctttgtttatgaaaatcattgttggattcatgtttagggtt 15503612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 4487108 - 4487050
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  4487108 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 4487050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 6053887 - 6053839
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6053887 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 6053839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31350114 - 31350162
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31350114 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 31350162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31363914 - 31363962
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31363914 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 31363962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 44570411 - 44570459
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44570411 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 44570459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 3338392 - 3338351
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  3338392 aaacaacgaaacgatgtagatctttaaagatctaaacgtttt 3338351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 21964399 - 21964481
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||| ||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  21964399 tttcaaaactgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 21964481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 31480616 - 31480581
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  31480616 aaacgacgaaacgatgtagatctttaaagatctaaa 31480581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 31495762 - 31495727
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  31495762 aaacgacgaaacgatgtagatctttaaagatctaaa 31495727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 40008515 - 40008468
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||| ||||||||||| ||||||||||||| |||||||||    
T  40008515 taaacaacgaaatgatgtagatccgtaaagatctaaaccttttctttc 40008468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 19510052 - 19510006
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||| |||||||||||||||||| ||| ||||||||| |||||||||    
T  19510052 aaacaacgaaacgatgtagatccgtaaggatctaaaccttttctttc 19510006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31480527 - 31480461
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||||| || ||||| ||||    ||| |||||||||||||||||||||||||    
T  31480527 agatctacgtcgttccaagccgtttttgaaaaaacaaatgccggattcgtgtttagggttaaaggac 31480461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31495673 - 31495607
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||||||||||| ||||| || ||||| ||||    ||| |||||||||||||||||||||||||    
T  31495673 agatctacgtcgttccaagccgtttttgaaaaaacaaatgccggattcgtgtttagggttaaaggac 31495607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 19199113 - 19199072
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  19199113 tgctggattcgtgtttagggttaaaggacgaattgattgatg 19199072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 19214168 - 19214127
Alignment:
Q  155 tgctggattcgtgtttagggttaaaggacaaatcgtttgatg 196  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  19214168 tgctggattcgtgtttagggttaaaggacgaattgattgatg 19214127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 28352881 - 28352840
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||| ||||||||||||| ||| |||||||||||||||||||    
T  28352881 aaacaacgaaacgatgtaaatctttaaagatctaaacgtttt 28352840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 28368066 - 28368025
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||| ||||||||||||| ||| |||||||||||||||||||    
T  28368066 aaacaacgaaacgatgtaaatctttaaagatctaaacgtttt 28368025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 13819894 - 13819714
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnn----ttagtttcaaaaccgtacg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||                      |||||||||||||||||||    
T  13819894 cagagaagtgataaacgacgaaacgatgtagatccttaaagatataaacgttttctttcaaaaaaaaaagataaaaaaaaattagtttcaaaaccgtacg 13819795  T
Q  108 aaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13819794 aagattttccgatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttaaggttaaaggacgaatc 13819714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 34801816 - 34801653
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaattttcagatcta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||                  | | |||||||||||||||||||||||||||||||    
T  34801816 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaagaaatcaaaaaag-tcaatttcaaaaccgtacgaaaattttcagatcta 34801718  T
Q  124 cgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||| ||||    
T  34801717 cgtcgtttcaagctgtgtatgggaaaataattgctggattcgtgtttagggttaaaggacgaatc 34801653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 15707103 - 15707009
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15707103 tttcagaaccgtacgaaa-ttttcagatctacgtcgtttcaagctgcgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 15707009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 34273592 - 34273688
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34273592 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 34273688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 34300599 - 34300695
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34300599 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 34300695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 37942592 - 37942489
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgttt 192  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| | ||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  37942592 tttcaaaaccgtacgaaaattt-cagatctacatcgtatcaagccgcgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatcgttt 37942494  T
Q  193 gatgt 197  Q
    |||||    
T  37942493 gatgt 37942489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27115037 - 27115132
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |   ||||||||||||||||||||||||||||| ||||    
T  27115037 tttcaaaaccgtacgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcatgctggattcgtgtttagggttaaaggacgaatc 27115132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27126002 - 27126097
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |   ||||||||||||||||||||||||||||| ||||    
T  27126002 tttcaaaaccgtacgaaaatttttagatctacgtcgtttcaagctgtatttgagaaatttcatgctggattcgtgtttagggttaaaggacgaatc 27126097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 16160061 - 16160155
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  16160061 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 16160155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 16170962 - 16171056
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  16170962 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 16171056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27798066 - 27798160
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  27798066 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 27798160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27813155 - 27813249
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  27813155 tttcaaaaccgtacgaaa-ttttcagatctacatcgcatcaagctgtgtttgggaaaatgattgctggattcgtgtttagggttaaaggacgaatc 27813249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 16962928 - 16962835
Alignment:
Q  94 ttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||  |||||  ||||||||||||||||||||| |||||||| ||||    
T  16962928 ttcaaaaccgtac-aaaattttcagatctacatcgtttcaagctgtgtttggaaaaataattgctggattcgtgtttagggctaaaggacgaatc 16962835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 35763153 - 35763248
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||| ||  ||||||||||||| || ||||||||||| ||||||||| |  ||||| |||||||||||||||||||||||| ||||    
T  35763153 tttcaaaaccgtacaaagtttttcagatctacatcatttcaagctgtatttgagaaatttcttgctagattcgtgtttagggttaaaggacgaatc 35763248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 39042593 - 39042495
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| | || ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  39042593 agtttcaaaaccgtacggaaattttttagatctacgtcgtttcaaaccgtatttgaaaaaatgactgctggattcgtgtttagggttaaaggacgaatc 39042495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 39057927 - 39057829
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| | || ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  39057927 agtttcaaaaccgtacggaaattttttagatctacgtcgtttcaaaccgtatttgaaaaaatgactgctggattcgtgtttagggttaaaggacgaatc 39057829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 19407248 - 19407156
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  19407248 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 19407156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 19422248 - 19422156
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  19422248 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 19422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 19551916 - 19551972
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagg 173  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  19551916 agatctacgtcgtttcaagctgtgtatgagaaaatcattgctggattcgtgtttagg 19551972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 34281257 - 34281328
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  34281257 agatctacgtcgtttcaagctgtatttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 34281328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 37369402 - 37369473
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  37369402 agatctacgtcgtttcaagctgtatttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 37369473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 37387236 - 37387307
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  37387236 agatctacgtcgtttcaagctgtatttggaaaaataattgctggattcgtgtttagggttaaaggacgaatc 37387307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 12707297 - 12707191
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| |||||||| ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  12707297 agtttcaaaaccgcacggaactttttagatctacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 12707198  T
Q  191 ttgatgt 197  Q
    |||||||    
T  12707197 ttgatgt 12707191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 12722697 - 12722591
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgt 190  Q
    ||||||||||||| ||| || |||| |||||||| ||||||||| | || ||||| ||||    |||||||||||||||||||||| |||||| ||||||    
T  12722697 agtttcaaaaccgcacggaactttttagatctacatcgtttcaaaccgtatttgaaaaaacagctgctggattcgtgtttagggttgaaggacgaatcgt 12722598  T
Q  191 ttgatgt 197  Q
    |||||||    
T  12722597 ttgatgt 12722591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 34183871 - 34183775
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  34183871 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttgaaaaaatgactgctggattcgtgtttagggttaaaggacgaatc 34183775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 34273518 - 34273576
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  34273518 cagagaagtaacaaacgacgaaacgatatagatctttaaagatctaaacgttttctttc 34273576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 34300525 - 34300583
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  34300525 cagagaagtaacaaacgacgaaacgatatagatctttaaagatctaaacgttttctttc 34300583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 5799946 - 5800042
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| ||| |   ||||||||||||||||||||||||||||| ||||    
T  5799946 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaagtaactgctggattcgtgtttagggttaaaggacgaatc 5800042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 31473104 - 31473008
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||| |||  ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  31473104 tttcaaagccgtacgacaaatttccagatctacatcgtttcaaactgaatttgaaaaaacaactgctggattcgtgtttagggttaaaggacgaatc 31473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 251233 - 251162
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||| || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  251233 agatctacgtcgtttcaagccgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 251162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 266763 - 266692
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||||| || ||||| ||||    ||||||||||||||||||||||||||||| ||||    
T  266763 agatctacgtcgtttcaagccgtatttgaaaaaacaaatgctggattcgtgtttagggttaaaggacgaatc 266692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 4728704 - 4728621
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||  ||   |||||||||||||||||    
T  4728704 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatcaatgtcagattcgtgtttagggtt 4728621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 10985637 - 10985708
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||| | | || ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  10985637 agatctacgtcgtttcgaaccgtatttgaaaaaatagttgctggattcgtgtttagggttaaaggacgaatc 10985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 15707183 - 15707124
Alignment:
Q  12 cagagaagtgataaa-cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  15707183 cagagaagtaataaaacgacgaagcgatgtagatctttaaagatctaaacgttttctttc 15707124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 22918913 - 22918816
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  22918913 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 22918816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 22932023 - 22931926
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  22932023 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 22931926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 37369314 - 37369355
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  37369314 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 37369355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 16963005 - 16962946
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatcct-taaagatctaaacgttttctttc 70  Q
    |||| ||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  16963005 cagaaaagagataaacgacgaagcgatgtagatcctcaaaagatctaaacgttttctttc 16962946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 27114964 - 27115019
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||| |||||||||||||||||||||||| | || |||||||||||||| ||||    
T  27114964 agaagtaataaacgacgaaacgatgtagatcttcaaggatctaaacgttttatttc 27115019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 27125929 - 27125984
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||| |||||||||||||||||||||||| | || |||||||||||||| ||||    
T  27125929 agaagtaataaacgacgaaacgatgtagatcttcaaggatctaaacgttttatttc 27125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 28274391 - 28274450
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatc 152  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  28274391 tttcaaaaccgtatgaaaattctccgatctacgtcgtttcaggctttgtttgtgaaaatc 28274450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 251321 - 251284
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  251321 aaacgacgaaacgatgtagatctttaaagatctaaacg 251284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 266851 - 266814
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  266851 aaacgacgaaacgatgtagatctttaaagatctaaacg 266814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 13927419 - 13927382
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  13927419 aaacgacgaaacgatgtagatctttaaagatctaaacg 13927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 13942615 - 13942578
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  13942615 aaacgacgaaacgatgtagatctttaaagatctaaacg 13942578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 19551828 - 19551865
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  19551828 aaacgacgaaacgatgtagatctttaaagatctaaacg 19551865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 34281169 - 34281210
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  34281169 aaacgacgaaacgatgtagatctttaaagatccaaacgtttt 34281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 37387148 - 37387189
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  37387148 aaacgacgaaacgatgtagatcttcaaagatctaaacgtttt 37387189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 13927336 - 13927260
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| ||  |||| ||||    ||||||||||||||||||||||||||||| ||||    
T  13927336 ttttaagatctatgtcgtttcaagccgtaattgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 13927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 13942532 - 13942456
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| ||  |||| ||||    ||||||||||||||||||||||||||||| ||||    
T  13942532 ttttaagatctatgtcgtttcaagccgtaattgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 13942456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 27813086 - 27813133
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  27813086 taaacaacgaaacgatgtagatccntgaagatctaaaccttttctttc 27813133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 16159992 - 16160039
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  16159992 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 16160039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 16170893 - 16170940
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  16170893 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 16170940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 16820143 - 16820108
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  16820143 aaacgacgaaacgatgtagatctttaaagatctaaa 16820108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 16875365 - 16875330
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  16875365 aaacgacgaaacgatgtagatctttaaagatctaaa 16875330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 19561007 - 19560925
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| | |||||  || | |||||||||||||||||    
T  19561007 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtggaaatcagtgttagattcgtgtttagggtt 19560925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 27797997 - 27798044
Alignment:
Q  23 taaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||    
T  27797997 taaacaacgaaacgatgtagatccgtgaagatctaaaccttttctttc 27798044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 31473176 - 31473121
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||| ||||| ||||||||||||||||| | || |||||||||||||| ||||    
T  31473176 agaagtgctaaacaacgaaacgatgtagatcttcaaggatctaaacgttttatttc 31473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 37942674 - 37942620
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||  ||||||  |||||||||||||||| ||||||||||||| |||||    
T  37942674 cagagaagtagtaaacggtgaaacgatgtagatccgtaaagatctaaaccttttc 37942620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 35763091 - 35763128
Alignment:
Q  29 acgaaacgatgtagatccttaaagatctaaacgttttc 66  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  35763091 acgaaacgatgtagattcttaaagatccaaacgttttc 35763128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 25092 - 24997
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25092 tttcagaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 24997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 25172 - 25113
Alignment:
Q  12 cagagaagtgataaa-cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  25172 cagagaagtaataaaacgacgaagcgatgtagatctttaaagatctaaacgttttctttc 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 47752 - 47847
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47752 tttcagaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 47847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 47672 - 47731
Alignment:
Q  12 cagagaagtgataaa-cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  47672 cagagaagtaataaaacgacgaagcgatgtagatctttaaagatctaaacgttttctttc 47731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 23826 - 24008
Alignment:
Q  13 agagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaat 112  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||                  | |||||||||||||||||||||     
T  23826 agagaagggattaacgacgaaacgatgtagatccttaaagatccaaacgttttctttcaaaaaagatcaaaaaa--tcagtttcaaaaccgtacgaaaac 23923  T
Q  113 tttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  23924 cttcaaatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaagagacgaatcgtttgatgt 24008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 1607 - 1434
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||                  | |||||||||||||||||||      
T  1607 cagagaagtaataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaaaacaaaaaaa----tcagtttcaaaaccgtacgaagt 1512  T
Q  112 tttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  1511 tttttcagatctacgtcgtttcaagctgtgtttgaaaaaacctttgctggattcgtgtttagggttaaaggacgaatc 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 28592 - 28429
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaattttcagatcta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||                  | | |||||||||||||||||||||||||||||||    
T  28592 aaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcaaaagaaatcaaaaaag-tcaatttcaaaaccgtacgaaaattttcagatcta 28494  T
Q  124 cgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||    
T  28493 cgtcgtttcaagctgtgtatgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 28429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 3371 - 3465
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  3371 tttcaaaaccgtacgaaa-ttttcagatctacgtcgtttcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 3465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 3294 - 3349
Alignment:
Q  15 agaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||| |||||||||||||||||||||||| | || |||||||||| ||| ||||    
T  3294 agaagtaataaacgacgaaacgatgtagatcttcaaggatctaaacgctttatttc 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 56015 - 55921
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56015 tttcagaaccgtacgaaa-ttttcagatctacgtcgtttcaagctgcgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatc 55921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 56095 - 56036
Alignment:
Q  12 cagagaagtgataaa-cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  56095 cagagaagtaataaaacgacgaagcgatgtagatctttaaagatctaaacgttttctttc 56036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 302 - 127
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttcnnnnnnnnnnnnnnnnnnttagtttcaaaaccgtacgaaaa 111  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||                  | | ||||||||||||||||||     
T  302 cagagaagtagtaaacgacgaaacgatgtagatccgtaaagatctaaaccttttctttcaaaaaagatcaaagaaaatcaatttcaaaaccgtacgaaa- 204  T
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  203 ttttcagatctacatcgtatcaagctgtgtttgagaaaataattgctggattcgtgtttagggttaaaggacgaatc 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 9e-29; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 47766795 - 47766891
Alignment:
Q  93 tttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||||||| ||  ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||    
T  47766795 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttaaaaaaatctttgctggattcgtgtttagggttaaaggacgaatc 47766891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 10937755 - 10937835
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||| |||||||||||||||||||| ||||||| |||||    
T  10937755 agatctacgtcgtttcaagctgtgcatgagaaaataattgctggatccgtgtttagggttaaaggacgaatcgttagatgt 10937835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 10956946 - 10957026
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||| |||||||||||||||||||| ||||||| |||||    
T  10956946 agatctacgtcgtttcaagctgtgcatgagaaaataattgctggatccgtgtttagggttaaaggacgaatcgttagatgt 10957026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 10972169 - 10972249
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatcgtttgatgt 197  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||| |||||||||||||||||||| |||| || |||||    
T  10972169 agatctacgtcgtttcaagctgtgcatgagaaaataattgctggatccgtgtttagggttaaaggacgaatcattagatgt 10972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 41784094 - 41784002
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  41784094 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 41784002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 41799362 - 41799270
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  41799362 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 41799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 16671584 - 16671682
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttc-agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| | || ||||| || ||   ||||||||||||||||||||||||||||| ||||    
T  16671584 agtttcaaaaccgtacggaaattttttagatctacgtcgtttcaaaccgtatttgaaaagataactgctggattcgtgtttagggttaaaggacgaatc 16671682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 47766721 - 47766779
Alignment:
Q  12 cagagaagtgataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47766721 cagagaagtaacaaacgacgaaacgatgtagatctttaaagatctaaacgttttctttc 47766779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 47201122 - 47201170
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47201122 ataaacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 47201170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 47353839 - 47353794
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  47353839 aacgacgaaacgatgtagatccgtaaagatctaaacgttttctttc 47353794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 14893936 - 14894033
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  14893936 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 14894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 15433069 - 15433151
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  15433069 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 15433151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 30728042 - 30727971
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||||| |||||| ||||| ||||||||| |  |||||| ||||||||||||| ||||||||| ||||    
T  30728042 agatctacgttgtttcaggctgtatttgagaaatttcttgctgaattcgtgtttaggattaaaggacgaatc 30727971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 10937667 - 10937704
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10937667 aaacgacgaaacgatgtagatctttaaagatctaaacg 10937704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 10956858 - 10956895
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10956858 aaacgacgaaacgatgtagatctttaaagatctaaacg 10956895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 10972081 - 10972118
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10972081 aaacgacgaaacgatgtagatctttaaagatctaaacg 10972118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 13767960 - 13767923
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacg 61  Q
    |||||||||||||||||||||| |||||||||||||||    
T  13767960 aaacgacgaaacgatgtagatctttaaagatctaaacg 13767923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 28579144 - 28579185
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  28579144 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 28579185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 28594570 - 28594611
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  28594570 aaacgacgaaacgatgtaaatctttaaagatctaaacgtttt 28594611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 13767875 - 13767799
Alignment:
Q  112 ttttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||| ||||||| |||||||||||| ||  |||| ||||    ||||||||||||||||||||||||||||| ||||    
T  13767875 ttttaagatctatgtcgtttcaagccgtaattgaaaaaacgaatgctggattcgtgtttagggttaaaggacgaatc 13767799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 36507362 - 36507458
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| |||  ||| || ||||||||||||||||| | |  ||||| ||||   || ||||||||||||||||||||||||||| ||||    
T  36507362 tttcaaaaccgtatgaagttttccaagatctacgtcgtttcaaaccgaatttgaaaaaacgattactggattcgtgtttagggttaaaggacgaatc 36507458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 16671519 - 16671565
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaa-gatctaaacgttttctttc 70  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  16671519 aacgacgaaacgatgtagatctttaaacgatctaaacgtttcctttc 16671565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 36507298 - 36507340
Alignment:
Q  24 aaacgacgaaacgatgtagatcctt-aaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  36507298 aaacgacgaaacgatgtagatctttaaaagatctaaacgtttt 36507340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 30728122 - 30728089
Alignment:
Q  32 aaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||| |||||||||||||||||||    
T  30728122 aaacgatgtagatctttaaagatctaaacgtttt 30728089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 861 - 790
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  861 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 955 - 909
Alignment:
Q  25 aacgacgaaacgatgtagatccttaaa-gatctaaacgttttctttc 70  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||    
T  955 aacgacgaaacgatgtagatcttcaaacgatctaaacgttttctttc 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 16440 - 16369
Alignment:
Q  117 agatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  16440 agatctacgtcgtttcaagctgtatttgaaaaaataattgctggattcgtgtttagggttaaaggacgaatc 16369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16528 - 16487
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  16528 aaacgacgaaacgatgtagatctttaaagatctaaacgtttt 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 13229 - 13137
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| | || ||||| ||||    |||||||||||||||||||||||||||||    
T  13229 agtttcaaaaccgtatggaaatttttagatctacgtcgtttcaaaccgtatttgaaaaaacaactgctggattcgtgtttagggttaaaggac 13137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 852 - 759
Alignment:
Q  91 agtttcaaaaccgtacgaaaattt-tcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggac 183  Q
    |||||| ||||||||||||| ||| |||||||||| || ||||||||||| ||||| ||||   ||| ||||||||||||||||||||||||||    
T  852 agtttccaaaccgtacgaaattttgtcagatctacatcatttcaagctgtatttgaaaaaacaattgttggattcgtgtttagggttaaaggac 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1179 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 1377 - 1281
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||| ||||    
T  1377 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaaggacgaatc 1281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1803
Description:

Target: scaffold1803; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 1066 - 1156
Alignment:
Q  93 tttcaaaaccgtacga-aaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaagga 182  Q
    |||||||  ||||||| |||||| ||||||||| ||||||||| |||| ||||| |||||   ||||||||||||||||||||||||||||    
T  1066 tttcaaagtcgtacgacaaatttccagatctacatcgtttcaaactgtatttgaaaaaataactgctggattcgtgtttagggttaaagga 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1536 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1536
Description:

Target: scaffold1536; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 693 - 741
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  693 ataaacgacgaaacgatgtagatccgtaaagatctaaacattttctttc 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 15917 - 16009
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaa 185  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | ||||||||||||||||| || |||||    
T  15917 tttcaaaaccgtatgaaaattcttagatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtttaaagacaa 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 30159 - 30251
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaa 185  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | ||||||| ||||||||| || |||||    
T  30159 tttcaaaaccgtatgaaaattcttagatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtatttagggtttaaagacaa 30251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1760
Description:

Target: scaffold1760; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 1083 - 1126
Alignment:
Q  22 ataaacgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  1083 ataaacgacgaaacgatgtagatccgtaaagatctaaacgtttt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 15532 - 15575
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgttttctttc 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  15532 cgacgaaacgatgtagatccttaaggatctaaacgttttctttc 15575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 15597 - 15634
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtt 130  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15597 tttcaaaaccgtacggaaattttcagatctacgtcgtt 15634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 6223 - 6144
Alignment:
Q  97 aaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    |||| |||| ||||||| || ||||||| |||||||||||| |||||| |||||||  |||||||||| |||||||||||    
T  6223 aaaaacgtatgaaaattctccgatctacatcgtttcaagctttgtttgtgaaaatcagtgctggattcatgtttagggtt 6144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 16641 - 16544
Alignment:
Q  91 agtttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||||||| || |||| ||||||||  |||||||| | || ||||| ||||    | ||||||||||||||||||||||||||| ||||    
T  16641 agtttcaaaaccgtacggaactttttagatctacaacgtttcaaaccgtatttgaaaaaacagctactggattcgtgtttagggttaaaggacgaatc 16544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 7251 - 7333
Alignment:
Q  93 tttcaaaaccgtacgaaaattttcagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggtt 176  Q
    ||||||||||||| ||||||| | |||||||||| |||||||||  |||||| |||||||  || | |||||||||||||||||    
T  7251 tttcaaaaccgtatgaaaattct-agatctacgttgtttcaagccttgtttgtgaaaatcagtgttagattcgtgtttagggtt 7333  T

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Target: scaffold0336 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 2562 - 2658
Alignment:
Q  93 tttcaaaaccgtacgaaaattttca-gatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacaaatc 188  Q
    ||||||||||||| |||  ||| || ||||||||||||||||| | |  ||||| |||||  || ||||||||||||||| ||||||||||| ||||    
T  2562 tttcaaaaccgtatgaagttttccaagatctacgtcgtttcaaaccgaatttgaaaaaatgattactggattcgtgtttatggttaaaggacgaatc 2658  T

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Target: scaffold0336; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 2496 - 2538
Alignment:
Q  24 aaacgacgaaacgatgtagatcctt-aaagatctaaacgtttt 65  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  2496 aaacgacgaaacgatgtagatctttaaaagatctaaacgtttt 2538  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 130417 - 130382
Alignment:
Q  24 aaacgacgaaacgatgtagatccttaaagatctaaa 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  130417 aaacgacgaaacgatgtagatctttaaagatctaaa 130382  T

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Target: scaffold0603 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 326 - 288
Alignment:
Q  27 cgacgaaacgatgtagatccttaaagatctaaacgtttt 65  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  326 cgacgaaacgatgtagatctttaaagatctaaatgtttt 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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