View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10551_low_3 (Length: 403)

Name: NF10551_low_3
Description: NF10551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10551_low_3
NF10551_low_3
[»] chr7 (40 HSPs)
chr7 (14-293)||(5080275-5080556)
chr7 (251-390)||(5080114-5080253)
chr7 (260-391)||(14197463-14197594)
chr7 (251-390)||(27508711-27508850)
chr7 (251-386)||(38761002-38761136)
chr7 (273-390)||(3404613-3404730)
chr7 (220-293)||(27508616-27508689)
chr7 (283-390)||(15272328-15272435)
chr7 (178-288)||(38761163-38761276)
chr7 (257-390)||(45012854-45012986)
chr7 (214-293)||(14197625-14197704)
chr7 (215-293)||(6441510-6441588)
chr7 (251-389)||(15000781-15000919)
chr7 (260-369)||(6441371-6441479)
chr7 (215-279)||(15272358-15272422)
chr7 (292-391)||(38761168-38761267)
chr7 (215-293)||(15000681-15000759)
chr7 (292-390)||(43257408-43257506)
chr7 (292-385)||(27508586-27508679)
chr7 (257-390)||(36150957-36151090)
chr7 (214-290)||(43257401-43257477)
chr7 (220-293)||(37787853-37787922)
chr7 (251-390)||(43257269-43257408)
chr7 (292-390)||(3404463-3404561)
chr7 (292-362)||(6441520-6441590)
chr7 (214-290)||(3404492-3404568)
chr7 (292-344)||(21658691-21658743)
chr7 (292-390)||(5080285-5080383)
chr7 (215-279)||(3404636-3404700)
chr7 (215-279)||(27508756-27508820)
chr7 (229-293)||(36150897-36150961)
chr7 (183-269)||(45013061-45013150)
chr7 (292-390)||(36150853-36150951)
chr7 (292-365)||(14197635-14197708)
chr7 (248-293)||(45013014-45013059)
chr7 (313-390)||(45013068-45013145)
chr7 (222-269)||(6441387-6441434)
chr7 (215-279)||(5080144-5080208)
chr7 (323-390)||(15000650-15000718)
chr7 (214-278)||(29934448-29934512)
[»] chr8 (48 HSPs)
chr8 (256-390)||(23976095-23976230)
chr8 (251-390)||(12106872-12107011)
chr8 (258-386)||(4288931-4289062)
chr8 (256-362)||(35202739-35202845)
chr8 (251-386)||(25149247-25149382)
chr8 (262-390)||(21124505-21124633)
chr8 (272-390)||(22469438-22469556)
chr8 (220-390)||(23625074-23625244)
chr8 (260-391)||(18324141-18324272)
chr8 (251-390)||(21185797-21185936)
chr8 (251-344)||(22326457-22326550)
chr8 (216-293)||(35202634-35202711)
chr8 (214-293)||(18324031-18324110)
chr8 (183-293)||(37543958-37544071)
chr8 (300-390)||(12107019-12107109)
chr8 (211-293)||(21124358-21124440)
chr8 (220-293)||(22426887-22426959)
chr8 (178-293)||(25149404-25149522)
chr8 (214-293)||(22469598-22469677)
chr8 (214-293)||(23976257-23976335)
chr8 (214-293)||(41358848-41358927)
chr8 (272-390)||(10289354-10289471)
chr8 (292-390)||(25149414-25149512)
chr8 (251-388)||(31254039-31254169)
chr8 (214-275)||(12107019-12107080)
chr8 (320-385)||(37494325-37494390)
chr8 (178-293)||(21184294-21184411)
chr8 (215-279)||(23976126-23976190)
chr8 (251-390)||(37543806-37543936)
chr8 (292-390)||(21184304-21184401)
chr8 (292-390)||(22426852-22426949)
chr8 (292-390)||(37543968-37544066)
chr8 (214-287)||(4289097-4289170)
chr8 (257-302)||(41358775-41358820)
chr8 (215-279)||(12106902-12106966)
chr8 (183-269)||(18324187-18324276)
chr8 (215-279)||(25149273-25149337)
chr8 (292-387)||(21124335-21124430)
chr8 (246-293)||(29585616-29585663)
chr8 (292-390)||(22469608-22469706)
chr8 (292-386)||(35202607-35202701)
chr8 (215-264)||(35202794-35202843)
chr8 (221-269)||(10289388-10289436)
chr8 (292-360)||(18324032-18324100)
chr8 (292-360)||(23976267-23976334)
chr8 (292-384)||(24609202-24609294)
chr8 (327-391)||(31250292-31250356)
chr8 (292-344)||(41358858-41358910)
[»] chr2 (21 HSPs)
chr2 (251-390)||(32092764-32092903)
chr2 (251-378)||(24006897-24007024)
chr2 (215-293)||(32092893-32092971)
chr2 (216-293)||(39598673-39598750)
chr2 (251-391)||(22092995-22093135)
chr2 (214-293)||(22092894-22092973)
chr2 (258-373)||(31499373-31499487)
chr2 (214-293)||(31819948-31820027)
chr2 (251-319)||(39598583-39598651)
chr2 (292-362)||(32092903-32092973)
chr2 (215-275)||(24006915-24006975)
chr2 (215-279)||(32092794-32092858)
chr2 (257-362)||(31820055-31820160)
chr2 (260-344)||(17914117-17914201)
chr2 (292-390)||(31819920-31820017)
chr2 (292-390)||(39598683-39598781)
chr2 (292-349)||(17914051-17914108)
chr2 (220-293)||(24007046-24007119)
chr2 (229-286)||(31499523-31499580)
chr2 (214-290)||(17914040-17914115)
chr2 (296-360)||(22092895-22092959)
[»] chr3 (54 HSPs)
chr3 (264-386)||(20759075-20759197)
chr3 (214-378)||(39541708-39541872)
chr3 (272-390)||(26498553-26498671)
chr3 (257-390)||(15031361-15031494)
chr3 (251-390)||(33343140-33343278)
chr3 (251-390)||(38498238-38498377)
chr3 (257-390)||(14434645-14434778)
chr3 (260-390)||(11989050-11989180)
chr3 (177-293)||(48755321-48755440)
chr3 (178-293)||(1426479-1426597)
chr3 (251-390)||(41984910-41985049)
chr3 (214-293)||(15031222-15031301)
chr3 (259-390)||(18445410-18445541)
chr3 (292-389)||(15031194-15031291)
chr3 (178-293)||(33343001-33343118)
chr3 (292-390)||(48755332-48755430)
chr3 (183-279)||(18445585-18445684)
chr3 (220-293)||(26498682-26498755)
chr3 (258-362)||(48755469-48755574)
chr3 (214-293)||(21514778-21514857)
chr3 (292-390)||(26498692-26498790)
chr3 (220-293)||(38498175-38498248)
chr3 (258-390)||(15005100-15005232)
chr3 (215-279)||(20759107-20759171)
chr3 (215-287)||(44967890-44967962)
chr3 (258-362)||(44967997-44968100)
chr3 (215-279)||(48755508-48755572)
chr3 (292-390)||(1426489-1426587)
chr3 (293-390)||(33343011-33343108)
chr3 (177-292)||(20758953-20759071)
chr3 (215-279)||(26498583-26498647)
chr3 (257-317)||(36383139-36383199)
chr3 (214-286)||(42453077-42453149)
chr3 (292-390)||(21514749-21514847)
chr3 (215-277)||(38498285-38498347)
chr3 (215-279)||(1426655-1426719)
chr3 (215-271)||(21514932-21514988)
chr3 (215-387)||(39541682-39541854)
chr3 (214-293)||(11989211-11989290)
chr3 (273-344)||(26920312-26920383)
chr3 (292-359)||(38498171-38498238)
chr3 (215-269)||(15005148-15005202)
chr3 (214-284)||(43562775-43562845)
chr3 (292-386)||(43562776-43562870)
chr3 (292-390)||(44967860-44967958)
chr3 (282-362)||(1426641-1426721)
chr3 (215-279)||(11989080-11989144)
chr3 (245-293)||(14434806-14434854)
chr3 (295-390)||(18445584-18445679)
chr3 (292-390)||(42453048-42453146)
chr3 (258-382)||(26840130-26840254)
chr3 (292-328)||(15005025-15005061)
chr3 (215-279)||(15031400-15031464)
chr3 (227-279)||(44968035-44968087)
[»] chr5 (40 HSPs)
chr5 (258-390)||(21943748-21943880)
chr5 (250-390)||(30100619-30100756)
chr5 (251-390)||(17497130-17497269)
chr5 (257-390)||(21211422-21211555)
chr5 (246-390)||(2555569-2555713)
chr5 (251-390)||(19491807-19491946)
chr5 (258-390)||(20429882-20430014)
chr5 (178-288)||(13753400-13753513)
chr5 (251-390)||(10760013-10760151)
chr5 (214-293)||(10760173-10760252)
chr5 (214-293)||(21943909-21943988)
chr5 (215-279)||(17497175-17497239)
chr5 (262-390)||(31912201-31912329)
chr5 (275-390)||(13753234-13753349)
chr5 (218-293)||(30100777-30100852)
chr5 (292-390)||(13753405-13753503)
chr5 (188-279)||(19491677-19491771)
chr5 (220-287)||(2555479-2555546)
chr5 (292-390)||(10760183-10760281)
chr5 (215-293)||(17497031-17497108)
chr5 (251-337)||(32539326-32539411)
chr5 (215-279)||(21211452-21211516)
chr5 (292-362)||(11297991-11298062)
chr5 (215-254)||(21211604-21211643)
chr5 (251-321)||(11298094-11298164)
chr5 (214-284)||(19564830-19564900)
chr5 (247-293)||(30852646-30852692)
chr5 (230-287)||(34419530-34419587)
chr5 (260-317)||(34419624-34419681)
chr5 (215-279)||(21943778-21943842)
chr5 (292-344)||(34419531-34419583)
chr5 (282-390)||(43548938-43549046)
chr5 (215-279)||(43548952-43549016)
chr5 (215-293)||(11297993-11298072)
chr5 (220-269)||(2555629-2555678)
chr5 (292-381)||(19564831-19564920)
chr5 (223-279)||(19491852-19491908)
chr5 (257-369)||(19564682-19564793)
chr5 (257-313)||(30852720-30852776)
chr5 (214-274)||(31912381-31912441)
[»] scaffold0407 (6 HSPs)
scaffold0407 (256-390)||(841-974)
scaffold0407 (256-390)||(7305-7438)
scaffold0407 (215-293)||(1033-1111)
scaffold0407 (215-293)||(7497-7575)
scaffold0407 (215-279)||(871-934)
scaffold0407 (215-279)||(7335-7398)
[»] scaffold0049 (2 HSPs)
scaffold0049 (251-389)||(59711-59849)
scaffold0049 (215-279)||(59740-59804)
[»] chr1 (24 HSPs)
chr1 (251-390)||(50335576-50335715)
chr1 (229-387)||(11633243-11633401)
chr1 (258-390)||(37608114-37608245)
chr1 (251-390)||(8097720-8097859)
chr1 (290-390)||(42847192-42847292)
chr1 (178-293)||(50335436-50335554)
chr1 (215-293)||(37608007-37608085)
chr1 (292-390)||(50335446-50335544)
chr1 (260-375)||(13735589-13735704)
chr1 (214-293)||(13735479-13735558)
chr1 (292-385)||(37607982-37608075)
chr1 (290-386)||(32373995-32374090)
chr1 (215-265)||(37608165-37608215)
chr1 (220-293)||(8097881-8097954)
chr1 (215-279)||(50335621-50335685)
chr1 (292-371)||(13735469-13735548)
chr1 (292-390)||(8097891-8097989)
chr1 (215-279)||(32374020-32374084)
chr1 (310-362)||(32374153-32374205)
chr1 (310-390)||(42847030-42847110)
chr1 (215-279)||(42847198-42847262)
chr1 (220-274)||(13735631-13735685)
chr1 (215-265)||(32374153-32374203)
chr1 (180-252)||(42847022-42847097)
[»] chr6 (31 HSPs)
chr6 (256-390)||(13536701-13536835)
chr6 (251-388)||(21222472-21222609)
chr6 (251-390)||(26705163-26705302)
chr6 (272-390)||(10587892-10588010)
chr6 (251-390)||(19295286-19295425)
chr6 (178-293)||(13536555-13536673)
chr6 (251-390)||(25089287-25089426)
chr6 (220-293)||(19295447-19295520)
chr6 (220-287)||(25089192-25089259)
chr6 (292-390)||(13536565-13536663)
chr6 (183-293)||(21222631-21222746)
chr6 (178-293)||(10588037-10588155)
chr6 (215-274)||(10587922-10587981)
chr6 (218-293)||(10672784-10672858)
chr6 (251-362)||(10862148-10862258)
chr6 (292-390)||(10588047-10588145)
chr6 (292-390)||(25089157-25089255)
chr6 (178-275)||(28752237-28752337)
chr6 (215-279)||(25089332-25089396)
chr6 (214-293)||(10862047-10862126)
chr6 (292-390)||(19295457-19295555)
chr6 (300-390)||(28752247-28752337)
chr6 (251-386)||(10672627-10672762)
chr6 (220-269)||(10862202-10862251)
chr6 (215-268)||(26705219-26705272)
chr6 (215-279)||(19295316-19295380)
chr6 (215-269)||(13536751-13536805)
chr6 (295-390)||(21222644-21222741)
chr6 (293-386)||(10862022-10862115)
chr6 (292-344)||(12651258-12651310)
chr6 (223-279)||(21222508-21222564)
[»] chr4 (67 HSPs)
chr4 (257-390)||(22017887-22018020)
chr4 (258-387)||(30470826-30470955)
chr4 (251-390)||(5448331-5448470)
chr4 (258-390)||(5324688-5324820)
chr4 (251-390)||(18830580-18830718)
chr4 (276-390)||(47463819-47463933)
chr4 (178-293)||(22018016-22018134)
chr4 (251-390)||(2634029-2634168)
chr4 (251-390)||(10757575-10757714)
chr4 (251-390)||(10970746-10970885)
chr4 (279-369)||(3391170-3391260)
chr4 (256-390)||(9826772-9826906)
chr4 (258-388)||(11821865-11821999)
chr4 (251-390)||(2063281-2063420)
chr4 (251-390)||(37694905-37695044)
chr4 (251-388)||(1387286-1387422)
chr4 (251-390)||(2232377-2232515)
chr4 (216-291)||(5448232-5448307)
chr4 (251-362)||(10380633-10380739)
chr4 (214-293)||(18830740-18830819)
chr4 (214-293)||(30470984-30471063)
chr4 (183-279)||(9826632-9826731)
chr4 (178-293)||(2634190-2634308)
chr4 (214-290)||(55382725-55382801)
chr4 (251-382)||(18836293-18836423)
chr4 (215-293)||(3370000-3370078)
chr4 (292-386)||(47943624-47943718)
chr4 (256-340)||(47943503-47943587)
chr4 (214-286)||(47943621-47943693)
chr4 (292-382)||(11821736-11821826)
chr4 (292-390)||(30470994-30471092)
chr4 (292-390)||(55382732-55382830)
chr4 (220-293)||(10380761-10380834)
chr4 (214-287)||(29908923-29908996)
chr4 (258-390)||(12140672-12140804)
chr4 (292-360)||(18830750-18830818)
chr4 (220-284)||(37695107-37695171)
chr4 (179-289)||(1387513-1387626)
chr4 (292-371)||(3369989-3370068)
chr4 (292-387)||(5448204-5448299)
chr4 (214-293)||(11821757-11821836)
chr4 (251-342)||(18500733-18500824)
chr4 (215-293)||(18836444-18836523)
chr4 (292-359)||(37695108-37695175)
chr4 (292-390)||(2063151-2063249)
chr4 (251-357)||(8951058-8951164)
chr4 (251-349)||(47144824-47144922)
chr4 (214-291)||(2232538-2232615)
chr4 (215-284)||(37694935-37695004)
chr4 (215-279)||(5448376-5448440)
chr4 (215-279)||(10757605-10757669)
chr4 (215-279)||(10970776-10970840)
chr4 (326-390)||(30378948-30379012)
chr4 (292-362)||(18836454-18836525)
chr4 (215-274)||(47463849-47463908)
chr4 (292-390)||(10380771-10380869)
chr4 (215-265)||(22017917-22017967)
chr4 (292-390)||(22018026-22018124)
chr4 (178-293)||(30378738-30378855)
chr4 (221-286)||(8951161-8951226)
chr4 (229-293)||(2063195-2063259)
chr4 (292-360)||(2232546-2232614)
chr4 (295-390)||(9826637-9826732)
chr4 (256-293)||(18500706-18500743)
chr4 (313-386)||(55382587-55382660)
chr4 (257-293)||(1387444-1387480)
chr4 (215-279)||(3391187-3391251)
[»] scaffold1300 (4 HSPs)
scaffold1300 (251-390)||(1485-1624)
scaffold1300 (323-390)||(1362-1429)
scaffold1300 (220-254)||(1397-1431)
scaffold1300 (223-279)||(1530-1586)
[»] scaffold0011 (3 HSPs)
scaffold0011 (251-386)||(190187-190322)
scaffold0011 (220-293)||(190344-190417)
scaffold0011 (215-279)||(190213-190277)
[»] scaffold0047 (4 HSPs)
scaffold0047 (257-391)||(11714-11846)
scaffold0047 (178-293)||(11601-11718)
scaffold0047 (292-390)||(11611-11708)
scaffold0047 (220-254)||(11776-11810)
[»] scaffold0026 (2 HSPs)
scaffold0026 (251-390)||(57584-57723)
scaffold0026 (188-279)||(57454-57548)
[»] scaffold0102 (3 HSPs)
scaffold0102 (258-390)||(24034-24165)
scaffold0102 (220-293)||(23932-24005)
scaffold0102 (219-267)||(24084-24132)
[»] scaffold0024 (3 HSPs)
scaffold0024 (259-390)||(127947-128078)
scaffold0024 (183-279)||(127804-127903)
scaffold0024 (295-390)||(127809-127904)
[»] scaffold0039 (1 HSPs)
scaffold0039 (254-390)||(27494-27630)
[»] scaffold0003 (3 HSPs)
scaffold0003 (228-293)||(314126-314191)
scaffold0003 (251-315)||(314213-314277)
scaffold0003 (292-344)||(314129-314181)
[»] scaffold0018 (3 HSPs)
scaffold0018 (311-390)||(72106-72185)
scaffold0018 (214-267)||(71942-71995)
scaffold0018 (251-337)||(72017-72103)
[»] scaffold0066 (3 HSPs)
scaffold0066 (215-293)||(15400-15478)
scaffold0066 (257-388)||(15506-15632)
scaffold0066 (292-390)||(15370-15468)


Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 5080556 - 5080275
Alignment:
Q  14 agacataggatggtgataatgagctttagtgaagttggagtccattgatggagatgtcgacctcaattaattgcgtacattgaagagatgaaaattgtag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5080556 agacataggatggtgataatgagctttagtgaagttggagtccattgatggagatgtcgacctcaattaattgtgtacattgaagagatgaaaattgtag 5080457  T
Q  114 gatcgtgtaggcatctattataaagttggaagaaaaaggccttaatgaatcacaaattaaatgggggagattaatcactttggtcccttaataagaaaga 213  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||| ||| || |||| ||||||    
T  5080456 gatcatgtaggcatttattataaagttggaagaaaaaggccttaatgaatcacaaactaaat-ggggaaattagtcactttagtctctgaataggaaaga 5080358  T
Q  214 ---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
       ||| |||||||||||||||||||||||||||| ||||||||  ||||||||| ||||| ||||||| |||||||||||||    
T  5080357 agtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatattagtcaatttagtccctgaa 5080275  T

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Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 5080253 - 5080114
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  |||| ||| |||||||| ||||||||||||||||||| ||||||||| || | ||||||| |||||||||||| |||||    
T  5080253 tagtacctgaatgtagactccgttaatcattttagtccttgaaattgactaacagagtctacattcaaagactgttttgcattttctctgcattcaggaa 5080154  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5080153 ctaaagtgactacttttttcccattcagggactaaagtga 5080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 260 - 391
Target Start/End: Complemental strand, 14197594 - 14197463
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||| | ||||||| | || | |||||||||||||||||||||||| ||||||||||    
T  14197594 aatgtagactccgttagtcactttagtccctgaaattgaccaacagaatctacattcgatgactgttttgcaatttctctgcatttagggactaaagtga 14197495  T
Q  360 ctacttttttcccattcagggactaaagtgat 391  Q
    |||||||||||||||| ||| |||||||||||    
T  14197494 ctacttttttcccattgaggaactaaagtgat 14197463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 27508711 - 27508850
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| ||| | ||||||||||||||| | || ||| |    
T  27508711 tagtccctgaatgtagactccgttagtcactttagtccatgaaattgactaacagagtctacattcagggactgttttgcaatttctctacgttcaggga 27508810  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  ||| ||||||||||| ||||||||    
T  27508811 ctaaagtgactactccttttccattcagggattaaagtga 27508850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 38761136 - 38761002
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||| ||||| |||||||||||||||||||  |||||||  |||||||| ||||| || ||| | ||||||||||||||| |||| | |||    
T  38761136 tagtccctgaatgcagactctgttagtcactttagtcccaaaaattgatcaacagagtctacatcca-ggactgttttgcaatttctctacattcacgaa 38761038  T
Q  351 ctaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38761037 ctaaagtgactacttctttcccattcagggactaaa 38761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 3404613 - 3404730
Alignment:
Q  273 ttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttccc 372  Q
    ||||||||||||||  |||| |||||||||| |||| |||||||||||| |||||||||||||||||||||| |||  |||||||||||||| |||| ||    
T  3404613 ttagtcactttagtttctgatattgactaaccgagtctacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttcc 3404712  T
Q  373 attcagggactaaagtga 390  Q
    ||| ||| ||||||||||    
T  3404713 atttaggaactaaagtga 3404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 27508616 - 27508689
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  27508616 tttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtcaatttagtccctgaa 27508689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 390
Target Start/End: Complemental strand, 15272435 - 15272328
Alignment:
Q  283 tagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggac 382  Q
    ||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||||||||| ||| |||||| ||||||||  |||| |||||| ||||    
T  15272435 tagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggac 15272336  T
Q  383 taaagtga 390  Q
    ||||||||    
T  15272335 taaagtga 15272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 38761276 - 38761163
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||||||||||| |||||| |||| ||||   |||||   ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  38761276 gggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgtt 38761177  T
Q  275 agtcactttagtcc 288  Q
    | ||| ||||||||    
T  38761176 aatcaatttagtcc 38761163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 45012986 - 45012854
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    |||||||||||||  | || ||||||||||||||||||||||| || ||||| ||||||  || ||| ||||||||||||| |||||| ||  |||||||    
T  45012986 ctgaatgtagactccgctaatcactttagtccctgaaattgaccaatagagtctacatttgag-attgttttgcaatttctttgcattcagagactaaag 45012888  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||  |||||||||||||||| |||||||    
T  45012887 tgactactcctttcccattcagggaccaaagtga 45012854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 14197704 - 14197625
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||| ||||||||    
T  14197704 cgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaa 14197625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 6441588 - 6441510
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| ||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||    
T  6441588 gtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaa 6441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 389
Target Start/End: Original strand, 15000781 - 15000919
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| ||||||||||  ||| | |||||||||||||||||||||| || | ||| |||||| | ||| | |||||||||| ||||||||  |   |    
T  15000781 tagtcccttaatgtagactccgttggacactttagtccctgaaattgaccaataaagtctacatttagggactgttttgcaattcctctgcatccaaaga 15000880  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtg 389  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  15000881 ctaaagtgactactcatttcccattcagggactaaagtg 15000919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 369
Target Start/End: Complemental strand, 6441479 - 6441371
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||  |||||||||||| |||| ||||||||||||| ||||| |||||||| ||| | ||||||||||||| |||||| ||| |||| |||||    
T  6441479 aatgtagactccgttagtcacttttgtccttgaaattgactaa-agagtctacattcagggactgttttgcaatttctttgcattcagggactatagtga 6441381  T
Q  360 ctactttttt 369  Q
    ||| ||||||    
T  6441380 ctattttttt 6441371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 15272358 - 15272422
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||    
T  15272358 gtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtca 15272422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 38761168 - 38761267
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtgat 391  Q
    ||||||| ||||| ||| |||||||| ||| ||||||||||||| |||||||| ||| ||||||||||  |||  ||||| |||||||||||||||||||    
T  38761168 aaattgattaacaaagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgat 38761267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 15000681 - 15000759
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| ||||||||||||||||||||||||||||||||| |  | ||||||||| ||||||||||| |||||||| ||||    
T  15000681 gtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatgttagtcagtttagtccttgaa 15000759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 43257408 - 43257506
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||| | ||||||||| |||  ||| | ||||||||| | ||||||    
T  43257408 aaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcagggattaaagtgacgactcattttctattcagggattgaagtga 43257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 27508679 - 27508586
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaa 385  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||| |||||||| ||| ||||||||||  |||  ||||| |||||||||||||    
T  27508679 aaattgactaacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaa 27508586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 36150957 - 36151090
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||| |||  |||||||| |||||||| |||||||||| |||| ||| |||||||| | | | ||||||||||||||  |||| | | | |||||    
T  36150957 ctgaatgtaaactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaggtactgttttgcaatttctcaacattcaaggattaaag 36151056  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||  ||| |||| |||||||||||||||    
T  36151057 tgactactcattttccatccagggactaaagtga 36151090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 43257477 - 43257401
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccct 290  Q
    ||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||| ||||||||| ||||||||||    
T  43257477 cgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctgttagtcaatttagtccct 43257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 37787922 - 37787853
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||||||   ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  37787922 tttagtccctgaatgca---aaattgcaaaatagttc-tgaatgtagactttgttagtcaatttagtccctgaa 37787853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 43257408 - 43257269
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| ||||||||||  |||||||| |||| |||||||||||||| |||| | | ||||||||  || | |||| |||||||| |||||| ||| |    
T  43257408 tagtccctaaatgtagacttcgttagtcaatttactccctgaaattgaccaacaaaatctacattcagagactcttttacaatttctatgcattcaggga 43257309  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||| ||||||| |  ||| ||||||||||| ||||||||    
T  43257308 ctaaggtgactattcattttccattcagggattaaagtga 43257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 3404561 - 3404463
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||||| ||| || |||||||||| ||||| |||||| |||||| |||| | || ||| | ||||| ||||||||||||    
T  3404561 aaattgactaacagagtgtacattcatggactactttgcaatttatctgcgtttaggtactaaaatgacgatttcttttctattcaaggactaaagtga 3404463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 6441520 - 6441590
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgacta 362  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||| |||||||| ||  |||||||||||||    
T  6441520 aaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcagagactaaagtgacta 6441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 3404492 - 3404568
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccct 290  Q
    |||||||||||| ||| || |||||||||||||||| |||| | |||||||| ||| ||||||||| ||||||||||    
T  3404492 cgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgttagtcaatttagtccct 3404568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 21658743 - 21658691
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  21658743 aaattgactaacagagtttacattcaagtattgttttgcaatttctttgcatt 21658691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 5080285 - 5080383
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||| | ||||||||||||  || |||||| |||||| |||||||| ||| |||||| | || |||| ||||| |||||| |||||||||||    
T  5080285 aaattgactaatatagtttacattcagagactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcagagactaaagtga 5080383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 3404700 - 3404636
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||| ||||||||||||| ||||||||||||||| | ||||||||||||  ||||||||    
T  3404700 gtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagtca 3404636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 27508820 - 27508756
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||| | ||| ||||||||||| ||| |||||||||||||| |||||||||    
T  27508820 gtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgttagtca 27508756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 36150897 - 36150961
Alignment:
Q  229 tgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||||||||||||| | |||  ||||||||| ||||||||| ||||||| |||||    
T  36150897 tgaatgcagataaattgcaaaataatccctagatgtagactctgttagtcaatttagtctctgaa 36150961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 45013150 - 45013061
Alignment:
Q  183 attaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    |||| ||||||| ||||||||||| ||||   | ||||| |||||||| |||||||| ||||||||||||||||| | ||||| ||||||    
T  45013150 attagtcactttagtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaatagtccttgaatatagact 45013061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 36150951 - 36150853
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||  | ||||||||||||||||| |||||||| | | | | ||||||| |||  ||||| ||| | ||||||||||||    
T  36150951 aaattgactaacagagtctacatctagggattattttgcaatttatctgcattcatggatttaagtgacgactcatttcctatttatggactaaagtga 36150853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 14197635 - 14197708
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactactt 365  Q
    ||||||||||||||||| |||||||| ||| ||| ||||||||| |||||||| |||  ||||| |||| ||||    
T  14197635 aaattgactaacagagtctacattcagggactatattgcaatttatctgcattcaggggctaaaatgacgactt 14197708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 45013059 - 45013014
Alignment:
Q  248 aaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||    
T  45013059 aaatagttcctgaatgtagagtttgttagtcaatttagtccctgaa 45013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 45013068 - 45013145
Alignment:
Q  313 attcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| ||||||||||||| | |||||| | | |||||| |||| ||| |||||| ||| ||||||||||||||    
T  45013068 attcaaggactattttgcaatttatttgcattcaaggactaaactgacgactcttttcctattaagggactaaagtga 45013145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 6441387 - 6441434
Alignment:
Q  222 tagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    ||||||||||||||| | ||||||||||| ||| ||||||||||||||    
T  6441387 tagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagact 6441434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 5080144 - 5080208
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||| |||||||||||| ||| ||||||| |||   |||||||||||| |||||||||    
T  5080144 gtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtca 5080208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 15000718 - 15000650
Alignment:
Q  323 tattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcaggga-ctaaagtga 390  Q
    ||||||||||||| |||||||| ||| ||||||||||| | |  ||||| ||||||||| |||||||||    
T  15000718 tattttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagggacctaaagtga 15000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 29934512 - 29934448
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtc 278  Q
    ||||| ||||||| || || | ||||||||||||||||||||| ||||| |||||  ||||||||    
T  29934512 cgtcactttagtctcttaaggtagataaattgcaaaatagttcatgaatatagacattgttagtc 29934448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 256 - 390
Target Start/End: Complemental strand, 23976230 - 23976095
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||| ||||||||||    
T  23976230 cctgaatgtagatcatgttagtcactttactccctgaaattgactaacagagtctacattcagggactgttttgcaatttctctgcattcaggaactaaa 23976131  T
Q  356 gtgactactt-ttttcccattcagggactaaagtga 390  Q
    |||||||||| |||| ||||||| ||||||||||||    
T  23976130 gtgactacttctttttccattcaaggactaaagtga 23976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 12107011 - 12106872
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| ||||||||||  ||| |||||||||||||||||||||||| |||||||| ||||| || ||| | |||||||||||||||||||| ||| |    
T  12107011 tagtccctaaatgtagactgcgttcgtcactttagtccctgaaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcaggga 12106912  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  12106911 ctaaagtgactactcatttcccattcagggactaaagtga 12106872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 4289062 - 4288931
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaac---agagtttacattcaaggattattttgcaatttctctgcatttaggaactaa 354  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    ||||| ||||||| |||| | ||||||||||||||| |||| | |||||||    
T  4289062 tgaatgtagactctgttagtcactttaatccctgaaattgactaattaaagagtctacattcgaggaatgttttgcaatttctctacattcatgaactaa 4288963  T
Q  355 agtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||||| ||| ||||||||||||    
T  4288962 agtgactactttttttccaatcagggactaaa 4288931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 35202739 - 35202845
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    ||||||||||||||  ||||||||||||||| |||||||||||| ||||||||  ||||||| ||| | |||||||||||||||||||| ||||||||||    
T  35202739 cctgaatgtagactccgttagtcactttagttcctgaaattgaccaacagagtaaacattcagggactgttttgcaatttctctgcattcaggaactaaa 35202838  T
Q  356 gtgacta 362  Q
    |||||||    
T  35202839 gtgacta 35202845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 25149382 - 25149247
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||| ||||||   ||| ||||||||||||| |||||||||| |||||||| |||||||| ||| | ||||||||||||| |||||| ||| |    
T  25149382 tagtccctgaacgtagacaccgttcgtcactttagtccttgaaattgaccaacagagtctacattcagggactgttttgcaatttctttgcattcaggga 25149283  T
Q  351 ctaaagtgactacttttttcccattcagggactaaa 386  Q
     ||||||||||||| |||| ||||||||||||||||    
T  25149282 ttaaagtgactactctttttccattcagggactaaa 25149247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 390
Target Start/End: Original strand, 21124505 - 21124633
Alignment:
Q  262 tgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgact 361  Q
    ||||||||  ||||| ||||||||||| | |||||||| |||||||| |||||||||||| | ||||||||||||||| |||| ||||| ||||||||||    
T  21124505 tgtagactccgttagccactttagtccataaaattgaccaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgact 21124604  T
Q  362 acttttttcccattcagggactaaagtga 390  Q
    |||  |||| |||||| | ||||||||||    
T  21124605 actcctttctcattcaagaactaaagtga 21124633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 22469556 - 22469438
Alignment:
Q  272 gttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    ||||||||| ||| |||||||||||||| |||||||| | |||||| ||| | ||||||||||||||| |||| |||||| |||||| |||||  |||||    
T  22469556 gttagtcaccttaatccctgaaattgaccaacagagtctgcattcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcc 22469457  T
Q  372 cattcagggactaaagtga 390  Q
    |||||||||| ||||||||    
T  22469456 cattcagggattaaagtga 22469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 390
Target Start/End: Original strand, 23625074 - 23625244
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaag 319  Q
    |||||||||||||| || ||| |||| |||||||| |||||||| ||||| |||| |||| ||||||||||||||||||  |||  ||| |||||||| |    
T  23625074 tttagtccctgaatacaaatagattgtaaaatagtacctgaatgcagactctgttggtcaatttagtccctgaaattgatcaacgcagtctacattcagg 23625173  T
Q  320 gattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
     | | |||| |||||||||||||   |   | |||||||||||||||||||| |||||| |||||||||||    
T  23625174 aagtgttttacaatttctctgcacccaaagattaaagtgactacttttttcctattcagagactaaagtga 23625244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 391
Target Start/End: Original strand, 18324141 - 18324272
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||  ||||||||||||||| | |||||||||| | ||||||  ||||||| ||| | |||||||||||||||||||| ||| |||||| |||    
T  18324141 aatgtagactccgttagtcactttagttcatgaaattgaccagcagagtcgacattcatggactgttttgcaatttctctgcattcagggactaaaatga 18324240  T
Q  360 ctacttttttcccattcagggactaaagtgat 391  Q
    |||| | |||| |||||||||| |||| ||||    
T  18324241 ctacgtctttctcattcagggattaaaatgat 18324272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 21185797 - 21185936
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||| |||  ||||||||||||||||| |||||||||| |||||||| || ||| | |||   |||| |||||| || ||||| ||| |    
T  21185797 tagtacctgaatgtacactcagttagtcactttagtccatgaaattgaccaacagagtctatatttagggaacgtttttcaatttttcagcattcaggga 21185896  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  |||| ||||||| |||||||||||    
T  21185897 ctaaagtgactactcatttctcattcagcgactaaagtga 21185936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 344
Target Start/End: Complemental strand, 22326550 - 22326457
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    ||||||||||||||||| |  |||| |||||||||||||| |||||||| || ||||| |||||||||||| |||||| ||||||||| |||||    
T  22326550 tagttcctgaatgtagattccgttaatcactttagtccctaaaattgaccaatagagtctacattcaaggactattttacaatttctcagcatt 22326457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 35202634 - 35202711
Alignment:
Q  216 tcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||| |||||||||||||| || | | |||||||||||||||||||| |||||| ||||||    
T  35202634 tcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgttagtcaatttagttcctgaa 35202711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 18324031 - 18324110
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||||||||||||| | ||||||| |||||| ||||||    
T  18324031 cgtcattttagttcatgaatgcagataaattgtaaaatagtccctgaatgtagactttattagtcaatttagttcctgaa 18324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 37544071 - 37543958
Alignment:
Q  183 attaatcactttggtcccttaataagaaagacgtc---attttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||| |||||| |||| |||||| |||   ||||||||||||||||| |||||||||||||||||||   ||| |||||||| |||||||||    
T  37544071 attagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 37543972  T
Q  280 ctttagtccctgaa 293  Q
     |||| ||||||||    
T  37543971 atttaatccctgaa 37543958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 12107019 - 12107109
Alignment:
Q  300 taacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||| | | ||||||||||| |||| ||||| ||| || |||||||||||    
T  12107019 taacagagtctacattcagggattattttgcaatttatctgcattcaaggactaaagtgacgacttctttcctatttagagactaaagtga 12107109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 21124358 - 21124440
Alignment:
Q  211 agacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||  || |||||||||| | ||||||| |||||||||||||    
T  21124358 agacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactctattagtcaatttagtccctgaa 21124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 22426887 - 22426959
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||    
T  22426887 tttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgttagtcaatttagtccctgaa 22426959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 25149522 - 25149404
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| |||| ||||   | ||||| | ||||| ||||||||||||||| ||||||||| |  ||||||||||||| ||||    
T  25149522 gggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgtt 25149423  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| ||||||| |||||    
T  25149422 agtcaatttagtctctgaa 25149404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 22469677 - 22469598
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||| ||||||||| | ||||||||| |||| ||||||||    
T  22469677 cgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagtcaatttaatccctgaa 22469598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 23976335 - 23976257
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||| |||||||| |||||||||| |||||||| ||||||||||| || ||||||||| ||||| |||||||    
T  23976335 cgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagtcaatttagcccctgaa 23976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 41358927 - 41358848
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| ||||| ||| |||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||| ||||    
T  41358927 cgtccttttaatccatgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaatcaatttagtccatgaa 41358848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 10289354 - 10289471
Alignment:
Q  272 gttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    |||||||||||||| || | |||||||| |  ||||| |||||||| | | | |||| ||||||||||||||||||||||| |||||||||||  ||| |    
T  10289354 gttagtcactttagcccttaaaattgaccactagagtctacattcaggaactgttttacaatttctctgcatttaggaact-aagtgactactcattttc 10289452  T
Q  372 cattcagggactaaagtga 390  Q
    |||| ||||| ||||||||    
T  10289453 catttagggattaaagtga 10289471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 25149414 - 25149512
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| ||| ||||||||  |||||||||||| ||| |||||||| ||  |||| |||||| |||  ||||| ||||||||||||||||||    
T  25149414 aaattgactaacaaagtctacattcagagattattttgcagtttatctgcattcagagactatagtgacgactcatttcctattcagggactaaagtga 25149512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 31254039 - 31254169
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| |||||||| | |||||||||||||| ||||||||||| || ||| |||| ||||||||||||     || |||||| |||||||||||  |    
T  31254039 tagtccctaaatgtagattttgttagtcactttaatccctgaaattaaccaacggagtctacattcaagga----cttacaatttttctgcatttagaga 31254134  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagt 388  Q
    ||||||||   |||| ||||||||| ||||||||||||    
T  31254135 ctaaagtg---acttctttcccatttagggactaaagt 31254169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 12107080 - 12107019
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtta 275  Q
    ||||| |||||||| |||||||||||||||||||||||| | |||||||||||||| |||||    
T  12107080 cgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgtta 12107019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 37494390 - 37494325
Alignment:
Q  320 gattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaa 385  Q
    |||| |||| ||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||    
T  37494390 gattgttttacaatttctctgcattcagggactaaagtgactacttatttcctattcagggactaa 37494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 21184294 - 21184411
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    |||| |||| ||||||| |||||| |||| ||||   | ||||| | ||||||| ||||||||||||||||||||||||| ||||||| || ||| | ||    
T  21184294 gggaaattagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaact-tatt 21184392  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||||||||    
T  21184393 agtcaatttagtccctgaa 21184411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 23976126 - 23976190
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||| |||||||||||| ||||||||||| ||| |||||||||||||| |||||||||    
T  23976126 gtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttagtca 23976190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 37543936 - 37543806
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||  |||| |||||||||||| |||||||||| || | |||||||||||| | | |||||||||||||| |||         |    
T  37543936 tagtccctgaatatagactccgttaatcactttagtccatgaaattgaccaataaagtttacattcatgaactattttgcaatttcactg---------a 37543846  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  ||| |||||||| |||||||||||    
T  37543845 ctaaagtgactactcattttccattcagagactaaagtga 37543806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 21184401 - 21184304
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||| | |||||| ||||| ||| ||||||||||||| ||||||||  || |||| |||||| |||  ||||| ||||||||||||||||||    
T  21184401 aaattgactaata-agtttatattcagggactattttgcaatttatctgcattcggggactagagtgacgactcatttcctattcagggactaaagtga 21184304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 22426949 - 22426852
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||  |||||||| ||| ||||||||||||| || ||||| | | ||||||||||  |||  ||||| ||||||||||||||||||    
T  22426949 aaattgactaacagagactacattcagggactattttgcaatttatc-gcattcatggactaaagtgatgactcgtttcctattcagggactaaagtga 22426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 37543968 - 37544066
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| ||| |||| |||| || ||||||||||||| ||| |||| ||| |||||| || | |||| ||||  ||||||||||||||||||    
T  37543968 aaattgactaacaaagtctacaatcaatgactattttgcaatttatctacattcagggactaaaatggcgacttctttcatattcagggactaaagtga 37544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 4289170 - 4289097
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    ||||||||||||||  |||||||||||| ||||||||||||   |||| | ||||||||||||||| |||||||    
T  4289170 cgtcattttagtccacgaatgcagataagttgcaaaatagtctttgaacgcagactatgttagtcaatttagtc 4289097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 41358820 - 41358775
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaa 302  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  41358820 ctgaatgtagactttgttagtcactttagtctctgaaattgactaa 41358775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 12106902 - 12106966
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||| ||||||||| |||| ||||    
T  12106902 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtca 12106966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 18324276 - 18324187
Alignment:
Q  183 attaatcactttggtcccttaataagaaagacgt---cattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    |||||||| |||  ||||| ||| ||||||||||   |||||||||||||||||||||| ||||||||||| ||| | ||||||| ||||    
T  18324276 attaatcattttaatccctgaatgagaaagacgtagtcattttagtccctgaatgcagagaaattgcaaaacagtccatgaatgtcgact 18324187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 25149273 - 25149337
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||| |||||||||||| | ||||||||||| ||| |||||||||||||| |||| ||||    
T  25149273 gtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtca 25149337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 21124430 - 21124335
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaag 387  Q
    ||||||||||| ||||| |||||| |  || ||||||||||||| |||| ||| ||  |||||||||||  ||  ||||| |||||||||||||||    
T  21124430 aaattgactaatagagtctacatttagagactattttgcaatttatctgtattcagagactaaagtgacgtctcctttcctattcagggactaaag 21124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 29585663 - 29585616
Alignment:
Q  246 caaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||| |||||||||||||| ||||| ||| |||||||||||||    
T  29585663 caaaatagtccctgaatgtagactttgttattcaatttagtccctgaa 29585616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 22469608 - 22469706
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||| | |||||||  | | |||||| |||||| |||||||||| | ||||||||||| |||  ||||  |||||  |||||||||||    
T  22469608 aaattgactaacagaatctacattctggaactattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattcatagactaaagtga 22469706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 35202701 - 35202607
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||| ||| |||||| |||||  |||||||||||| | |||||| ||| |||||| |||  |||| ||||| |||||  |||||||    
T  35202701 aaattgactaacatagtctacatttaaggaccattttgcaatttatttgcattcagggactaaaatgataacttctttcctattcaatgactaaa 35202607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 35202843 - 35202794
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgt 264  Q
    |||| |||||| |||||||||||| ||||||||||| ||| |||||||||    
T  35202843 gtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgt 35202794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 10289436 - 10289388
Alignment:
Q  221 ttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    ||||| ||| |||||||| |||||| |||| ||||||||||||||||||    
T  10289436 ttagttcctaaatgcagagaaattgtaaaacagttcctgaatgtagact 10289388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 18324100 - 18324032
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgac 360  Q
    ||||||||||| | ||| |||||||| ||| |||||| |||||| |||||||| | |||||||| ||||    
T  18324100 aaattgactaataaagtctacattcagggactattttacaatttatctgcattcatgaactaaaatgac 18324032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 23976267 - 23976334
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgac 360  Q
    ||||||||||||||||  |||||||| ||| |||||| |||||| ||| |||| |||||||||| ||||    
T  23976267 aaattgactaacagag-ctacattcagggactattttacaatttatctacattcaggaactaaaatgac 23976334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 384
Target Start/End: Original strand, 24609202 - 24609294
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggacta 384  Q
    |||||||||||||||   ||||| |||| | |||||| |||||| | |||||| ||||||||||||||  |||  ||||| ||| ||||||||    
T  24609202 aaattgactaacagaacctacatccaagaactattttacaatttatttgcattcaggaactaaagtgaagactcctttcctatttagggacta 24609294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 31250292 - 31250356
Alignment:
Q  327 ttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtgat 391  Q
    |||||||||||||||||||||  | |||||||||| ||  ||| |||||||||  ||||||||||    
T  31250292 ttgcaatttctctgcatttagagattaaagtgacttctccttttccattcaggagctaaagtgat 31250356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 41358858 - 41358910
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    ||||||| ||||||||| |||||||| ||| ||||||||||||| ||| ||||    
T  41358858 aaattgattaacagagtctacattcagggactattttgcaatttatctacatt 41358910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 32092903 - 32092764
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  ||||||||||||||| ||||| |||||| |||||||| |||||||| ||| | |||||||||||||||||||| ||| |    
T  32092903 tagtccctgaatgtagacttcgttagtcactttagttcctgagattgacaaacagagtctacattcagggactgttttgcaatttctctgcattcaggga 32092804  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  32092803 ctaaagtgactactcatttcccattcagggactaaagtga 32092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 251 - 378
Target Start/End: Complemental strand, 24007024 - 24006897
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| ||||| ||| ||||||| |||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||| ||| |    
T  24007024 tagtacctgaatgtagactctgttaatcattttagtctctgaaattgagtaacagagtctacattcagggactgttttgcaatttctctgcattcaggga 24006925  T
Q  351 ctaaagtgactacttttttcccattcag 378  Q
    |||||||||||| |||||||||||||||    
T  24006924 ctaaagtgactaattttttcccattcag 24006897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 32092971 - 32092893
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||    
T  32092971 gtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaa 32092893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 39598750 - 39598673
Alignment:
Q  216 tcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||| |||||    
T  39598750 tcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgttggtcaatttagtcgctgaa 39598673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 391
Target Start/End: Original strand, 22092995 - 22093135
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||  ||| |||||||||||||||||| ||||| |||||| | ||||||||  || | ||||||||||||||| |||| ||| |    
T  22092995 tagtccctgaatatagactccgtttgtcactttagtccctgaatttgaccaacagaatctacattcagagactgttttgcaatttctctacattcaggga 22093094  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtgat 391  Q
    ||||||| |||| |  ||| ||||||||| |||||||||||    
T  22093095 ctaaagtaactaatcattttccattcaggaactaaagtgat 22093135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 22092894 - 22092973
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||| ||| ||||||||||||| |||||||| |||||||||||||| ||||||||| |||||| ||||||    
T  22092894 cgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaa 22092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 31499487 - 31499373
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||||| | || |||||||| ||||||||||||||| |||| | | |||||| ||| | | |||||||||||||||| ||||| ||| ||||||    
T  31499487 tgaatgtagactttatttgtcactttggtccctgaaattgaccaacaaaatctacattaaag-actgttttgcaatttctctgtatttaagaattaaagt 31499389  T
Q  358 gactacttttttccca 373  Q
    |||||||| |||||||    
T  31499388 gactacttctttccca 31499373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 31819948 - 31820027
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||| ||||||||  |||||||| ||||    
T  31819948 cgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctgttagtccatttagtccttgaa 31820027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 39598651 - 39598583
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaag 319  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  39598651 tagtccctgaatgtagactccgttagtcactttagtccctaaaattgactaacaaagtctacattcaag 39598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 32092903 - 32092973
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgacta 362  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||| |||||||| ||| |||||||||||||    
T  32092903 aaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaagtgacta 32092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 24006915 - 24006975
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtta 275  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  24006915 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtta 24006975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 32092794 - 32092858
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||    
T  32092794 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtttgtca 32092858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 31820055 - 31820160
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||| |||  |||| |||||||||||||| ||||||||||||||| | |||||||| | | | ||||| | |||||||| ||| || |||||||     
T  31820055 ctgaatgtatactccgttaatcactttagtccctaaaattgactaacagaatctacattcatgaactgttttgtattttctctgtattcagaaactaaaa 31820154  T
Q  357 tgacta 362  Q
    ||||||    
T  31820155 tgacta 31820160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 17914117 - 17914201
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    |||||||| | |||||||||||||| || || ||||||||||| ||||| |||||||||  | | ||||||||||||||| ||||    
T  17914117 aatgtagattttgttagtcactttaatcactaaaattgactaatagagtctacattcaaaaactgttttgcaatttctctacatt 17914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 31820017 - 31819920
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||| |||||||||||| ||||||||  || |||||| |||||| |||||||||||| |||||| |||| | |  ||||| |||| |||||||||||||    
T  31820017 aaatggactaacagagtctacattcagtgactattttccaatttatctgcatttagggactaaaatgacgattcctttcctattc-gggactaaagtga 31819920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 39598683 - 39598781
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||| |||| ||| |||||||| ||| ||||||||||||| |||||||| ||  |||||| |||  | || ||||| ||| ||||||||||||||    
T  39598683 aaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcagtgactaaaatgaaaatttctttcctattgagggactaaagtga 39598781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 17914108 - 17914051
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttagga 349  Q
    ||||||||||||| | | |||||||||||||||||||||||||| | ||| |||||||    
T  17914108 aaattgactaacaaaatctacattcaaggattattttgcaatttatttgcgtttagga 17914051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 24007119 - 24007046
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||| ||||| ||||||||||| |||||||    |||||||||||| ||||||||| |||||||| ||||    
T  24007119 tttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctgttagtcaatttagtccatgaa 24007046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 31499580 - 31499523
Alignment:
Q  229 tgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagt 286  Q
    |||||| |||||||||| |||||||| |||||||||||| | ||||||||| ||||||    
T  31499580 tgaatgtagataaattgtaaaatagtccctgaatgtagaatctgttagtcattttagt 31499523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 17914040 - 17914115
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccct 290  Q
    |||||||||||||| | || ||| ||||||||||||||| | | |||||||||| | ||||||||| ||||| ||||    
T  17914040 cgtcattttagtcc-taaacgcaaataaattgcaaaataatccttgaatgtagattttgttagtcaatttagaccct 17914115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 22092959 - 22092895
Alignment:
Q  296 tgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgac 360  Q
    ||||||||||||| |||||||| ||| |||||| |||||| |||||| | | | |||||||||||    
T  22092959 tgactaacagagtctacattcagggactattttacaatttatctgcaatcaaggactaaagtgac 22092895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 20759075 - 20759197
Alignment:
Q  264 tagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactac 363  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| | | |||||| |||||||    
T  20759075 tagactatgttagtcactttagtccctgaaattgactaacaaagtctacattcaaggactattttgcaatttctctgcattcaaggactaaaatgactac 20759174  T
Q  364 ttttttcccattcagggactaaa 386  Q
    |  |||| |||||||||||||||    
T  20759175 tcctttctcattcagggactaaa 20759197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 378
Target Start/End: Original strand, 39541708 - 39541872
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttaca 313  Q
    ||||| ||||||| |||||||||||||||||||||| |||| ||||||| |||| ||||||||||||||| |||| | |||||||| |||||||| ||||    
T  39541708 cgtcactttagtctctgaatgcagataaattgcaaagtagtccctgaatatagattatgttagtcacttttgtccttaaaattgaccaacagagtctaca 39541807  T
Q  314 ttcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcag 378  Q
    ||||  || | |||| ||||||||||||||| ||| |||||||||||||||| ||| | ||||||    
T  39541808 ttcagagactgttttacaatttctctgcattcagggactaaagtgactacttcttttctattcag 39541872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 26498671 - 26498553
Alignment:
Q  272 gttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    |||||||||||||||||||||||||||| ||||  || |||||||| ||| | |||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  26498671 gttagtcactttagtccctgaaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcc 26498572  T
Q  372 cattcagggactaaagtga 390  Q
    |||||||||||||||||||    
T  26498571 cattcagggactaaagtga 26498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 257 - 390
Target Start/End: Original strand, 15031361 - 15031494
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| ||| || ||| | ||| | |||||||||||||||||||| ||  |||||||    
T  15031361 ctgaatgtagactccgttagtcactttagtccctgaaattgaccaacaaagtctagatttagggactgttttgcaatttctctgcattcagagactaaag 15031460  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||  ||||||||||||||||||||||||    
T  15031461 tgactactcatttcccattcagggactaaagtga 15031494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 33343140 - 33343278
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| ||||| ||| |||||| |||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||| || ||    
T  33343140 tagtccctgaatgtagactttgttaatca-tttagttcctgaaattgaccaacagagtttatattcaaggactgttttgcaatttctctgcattcagtaa 33343238  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||| || |||||  ||||||||||||||| ||||||||    
T  33343239 ctaaaatgtctactcatttcccattcagggattaaagtga 33343278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 38498238 - 38498377
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| | |||||||||||||||||| ||||| ||||||| ||| ||||||||  || ||||||||||||||| |||||| ||| |    
T  38498238 tagtccctgaatgtagactctattagtcactttagtccctaaaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcaggga 38498337  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  |||| |||||||||| ||||||||    
T  38498338 ctaaagtgactactcctttctcattcagggattaaagtga 38498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 14434778 - 14434645
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    |||||||||||||  | ||||||||||||||||||||||| ||||||| ||| |||||||||||| | ||||||||| |||||||||||| | |||||||    
T  14434778 ctgaatgtagactccgctagtcactttagtccctgaaattaactaacaaagtctacattcaaggactgttttgcaatatctctgcatttacggactaaag 14434679  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    |||||| |  ||||||||||| ||| ||||||||    
T  14434678 tgactattcatttcccattcatggattaaagtga 14434645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 390
Target Start/End: Complemental strand, 11989180 - 11989050
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||  ||||| |||||||||| ||||||||||| |||||||| || ||||| ||| | |||||||||||||||||||| ||  ||||||||||    
T  11989180 aatgtagactccgttagccactttagtctctgaaattgaccaacagagtctatattcagggactgttttgcaatttctctgcattcagagactaaagtga 11989081  T
Q  360 ctacttttttcccattcagggactaaagtga 390  Q
    |||||| |||||| ||||||||| |||||||    
T  11989080 ctacttctttccctttcagggacaaaagtga 11989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 48755321 - 48755440
Alignment:
Q  177 ggggagattaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgt 273  Q
    |||||||||| ||||||| |||||| |||| |||||    ||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||| |||    
T  48755321 ggggagattagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgt 48755420  T
Q  274 tagtcactttagtccctgaa 293  Q
    |||||| |||||||||||||    
T  48755421 tagtcaatttagtccctgaa 48755440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 1426479 - 1426597
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| ||| || |||| ||||   | ||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1426479 gggagattagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgtt 1426578  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||||||||    
T  1426579 agtcaatttagtccctgaa 1426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 41985049 - 41984910
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | |    
T  41985049 tagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagta 41984950  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    || ||||||||||| |||||  ||||||| ||||||||||    
T  41984949 cttaagtgactactcttttcttattcaggaactaaagtga 41984910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 15031222 - 15031301
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||    
T  15031222 cgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaa 15031301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 390
Target Start/End: Complemental strand, 18445541 - 18445410
Alignment:
Q  259 gaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtg 358  Q
    |||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | ||| |||||    
T  18445541 gaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtg 18445442  T
Q  359 actacttttttcccattcagggactaaagtga 390  Q
    |||||| |||||  ||||||| ||||||||||    
T  18445441 actactcttttctgattcaggaactaaagtga 18445410  T

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Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 15031291 - 15031194
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtg 389  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||| |||||||| | | ||||||||||| ||| |||||||||||| |||||||||||    
T  15031291 aaattgactaacagagtctacattcagggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtg 15031194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 33343001 - 33343118
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| ||||  |||   | ||||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  33343001 gggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgtt 33343100  T
Q  275 agtcactttagtccctgaa 293  Q
    |||||  ||||||||||||    
T  33343101 agtca-attagtccctgaa 33343118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 48755430 - 48755332
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||||| ||| |||||||||| || |||||||| ||  ||||||||||| |||  ||||| ||||||||||||||||||    
T  48755430 aaattgactaacagagtctacattcagggactattttgcaacttatctgcattcagagactaaagtgacgactcctttcctattcagggactaaagtga 48755332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 18445684 - 18445585
Alignment:
Q  183 attaatcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||||||||||| |||| ||||||  | ||   |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  18445684 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 18445585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 26498755 - 26498682
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||| ||||||| |||||    
T  26498755 tttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtcaatttagtcactgaa 26498682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 48755469 - 48755574
Alignment:
Q  258 tgaatgtagacta-tgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||||||  |||||||||||||   ||||||||||||| |||||||| |||||||| | | | |||||||||||||||||||| ||| |||||||    
T  48755469 tgaatgtagactcgtgttagtcactttgacccctgaaattgaccaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaag 48755568  T
Q  357 tgacta 362  Q
    ||||||    
T  48755569 tgacta 48755574  T

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Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 21514778 - 21514857
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||||||||| ||||||||||| |||||||| | |||||||||||| ||||||| | |||||||||||||    
T  21514778 cgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgttagttaatttagtccctgaa 21514857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 26498692 - 26498790
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||| |||| |||||||| ||| ||||||||||||| |||||||| ||| ||||||||||  |||  ||||| |||||| |||||||||||    
T  26498692 aaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagagactaaagtga 26498790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 38498175 - 38498248
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||||||||||||||||| | | ||| || ||| ||||||||| |||||||||||||    
T  38498175 tttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttagtcaatttagtccctgaa 38498248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 390
Target Start/End: Original strand, 15005100 - 15005232
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||| ||| |||||||||||| | ||||||||||||||  ||||||| ||||||||   | | |||||||||||||||||||| ||  ||||||||    
T  15005100 tgaatgtatactttgttagtcacttaaatccctgaaattgaccgacagagtctacattcagaaactgttttgcaatttctctgcattcagagactaaagt 15005199  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    ||| | |  || |||||||| ||| ||||||||    
T  15005200 gaccagtcattacccattcaaggattaaagtga 15005232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 20759171 - 20759107
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    ||||||||||||| |||||||||| ||||||||||||||| | |||||||||||| |||||||||    
T  20759171 gtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtca 20759107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 44967890 - 44967962
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    |||| ||||||||||||||||| ||| ||||||||||||||  |||||||||||| ||||||||| |||||||    
T  44967890 gtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgttagtcaatttagtc 44967962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 44967997 - 44968100
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||||| | |||||||||||| |||||||||||||| |||| ||| |||||| | ||| | ||||||||||| ||| |||| ||| ||||||||    
T  44967997 tgaatgtagactctcttagtcactttaatccctgaaattgaccaacaaagtctacatttagggactgttttgcaatttatctacattcagg-actaaagt 44968095  T
Q  358 gacta 362  Q
    |||||    
T  44968096 gacta 44968100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 48755572 - 48755508
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||    
T  48755572 gtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtca 48755508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 1426587 - 1426489
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| | | |||||||| | | ||||||||||||| |||||||| |||| |||||||||| |||  ||||| |||||| |||||||||||    
T  1426587 aaattgactaacataatctacattcaggaactattttgcaatttatctgcattcaggatctaaagtgacgactcatttcctattcagagactaaagtga 1426489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 33343108 - 33343011
Alignment:
Q  293 aattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||| ||| |||||||| |||  |||| ||||||| |||||||| ||| ||||||||||| |||  ||| | ||||||||||||||||||    
T  33343108 aattgactaacatagtctacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtga 33343011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 20758953 - 20759071
Alignment:
Q  177 ggggagattaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgt 273  Q
    ||||||||||||||||||  || || |||| |||| |   ||||| |||||||| ||||| ||||||||||| ||||||||  |||||| |||||| | |    
T  20758953 ggggagattaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctat 20759052  T
Q  274 tagtcactttagtccctga 292  Q
    |||||| ||||||||||||    
T  20759053 tagtcaatttagtccctga 20759071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 26498583 - 26498647
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||| ||||    
T  26498583 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtca 26498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 36383139 - 36383199
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattca 317  Q
    |||||| ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  36383139 ctgaatatagacttcgttagtcactttagtccctaaaattgactaacagagtttgcattca 36383199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 42453077 - 42453149
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagt 286  Q
    ||||| |||||||  |||||||| ||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  42453077 cgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagt 42453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 21514847 - 21514749
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||| |||| ||| ||| ||||||||||| |||| |||   |||||  |||||||||||    
T  21514847 aaattaactaacagagtctacattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttttatattcaaagactaaagtga 21514749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 38498347 - 38498285
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagt 277  Q
    |||| ||||||||||||||||| | |||||||||||||||  ||||||||||||| |||||||    
T  38498347 gtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagt 38498285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 1426719 - 1426655
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    ||||||||| |||||||||||||| ||||||||||| |||  ||||||||||||| |||| ||||    
T  1426719 gtcattttaatccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtca 1426655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 21514988 - 21514932
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactat 271  Q
    ||||||||||||| |||||| ||||||||| ||||| ||| ||||||||||||||||    
T  21514988 gtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagactat 21514932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 387
Target Start/End: Complemental strand, 39541854 - 39541682
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacat 314  Q
    |||| ||||||||||||||||||| |||||| |||| |||  ||||||||||||| |||| |||| |||        ||| ||||||||| | | || ||    
T  39541854 gtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattttaaggacaaaagtgactaacataatctatat 39541755  T
Q  315 tcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaag 387  Q
    ||| ||| || |||||||||| |||||||| ||  ||||||||||| |||  ||||| |||||| ||||||||    
T  39541754 tcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaag 39541682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 11989290 - 11989211
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||| ||| ||| |||||||||||||||||||  ||   |||||||| ||||||||| | |||||||||||    
T  11989290 cgtcattttagtctctgcatgtagataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaa 11989211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 26920312 - 26920383
Alignment:
Q  273 ttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    |||||||||||| |||||||||||||  |||| ||| |||||||||| | | ||||||||||| ||||||||    
T  26920312 ttagtcactttaatccctgaaattgatcaacaaagtatacattcaagaactgttttgcaatttttctgcatt 26920383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 359
Target Start/End: Complemental strand, 38498238 - 38498171
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||||| |||||| ||| | ||| ||||||||||||| |||||||| ||| ||||||||||    
T  38498238 aaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggactaaagtga 38498171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 15005202 - 15005148
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    |||| ||||||| ||||||||||| ||||||||||| |||| |||||||||||||    
T  15005202 gtcactttagtctctgaatgcagagaaattgcaaaacagtttctgaatgtagact 15005148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 43562845 - 43562775
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcacttta 284  Q
    ||||||||||||  |||||||||||||||||| |||||||| | |||||||||| | |||| |||| ||||    
T  43562845 cgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctgtttgtcaattta 43562775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 43562776 - 43562870
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    |||||||| |||||| | |||||||||||| |||||| |||||| |||||||| || ||||||| |||| | |  ||||| ||| ||||||||||    
T  43562776 aaattgacaaacagaatctacattcaaggactattttacaatttatctgcattcagaaactaaaatgacgaatcatttcctattgagggactaaa 43562870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 44967958 - 44967860
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||||||  | ||||||||||| | | |||||| ||| ||||||||||| |||  ||| | ||| | ||||||||||||    
T  44967958 aaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcagggactaaagtgacaactcattttctattaaaggactaaagtga 44967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 1426641 - 1426721
Alignment:
Q  282 ttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgacta 362  Q
    |||||| ||||||||||| |||| ||| ||||||||  || | |||||||||||||||||||| ||| | |||| ||||||    
T  1426641 ttagtcactgaaattgaccaacaaagtctacattcagtgactgttttgcaatttctctgcattcagggattaaaatgacta 1426721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 11989080 - 11989144
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||| ||||||||||| ||||||||||| ||| ||||||| |||||| |||| ||||    
T  11989080 gtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgttggtca 11989144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 14434854 - 14434806
Alignment:
Q  245 gcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  14434854 gcaaaatagtccatgaatgtagactctgttagtcaatttagtccctgaa 14434806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 18445584 - 18445679
Alignment:
Q  295 ttgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||| ||| ||||||||   | ||||||||||||| |||||||| | | ||||||||||  | || ||||| |||||||||| |||||||    
T  18445584 ttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtga 18445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 42453146 - 42453048
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||| | ||| ||||||||||||| | |||||| |   ||||||||||| |||  ||| | ||||| ||| ||||||||    
T  42453146 aaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagtga 42453048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 382
Target Start/End: Original strand, 26840130 - 26840254
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaa-cagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||| || ||| |||||||||||||| ||| || |||| || || |||||| || ||||| |||||  ||||||||||||||||||| |  ||||||||    
T  26840130 tgaatataaactctgttagtcactttaatccatggaattaaccaaacagagtctatattcagggattgctttgcaatttctctgcattca-aaactaaag 26840228  T
Q  357 tgactacttttttcccattcagggac 382  Q
    ||||| ||  |||| | |||||||||    
T  26840229 tgactgctcatttctcgttcagggac 26840254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 15005061 - 15005025
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattatttt 328  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  15005061 aaattgactaacagagtctacattcaaggactatttt 15005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 15031464 - 15031400
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||| ||||||||||| ||||||||||| ||| ||| ||| |||||| |||| ||||    
T  15031464 gtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtca 15031400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 44968087 - 44968035
Alignment:
Q  227 cctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||| |||| ||||    
T  44968087 cctgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtca 44968035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 21943880 - 21943748
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||| ||| |||||||||||  | |||||||||||||||||||| ||| ||||||||    
T  21943880 tgaatgtagattatgttaatcactttagtccctaaaattgactaacaaagtctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagt 21943781  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    |||||||  ||||||||||| ||||||||||||    
T  21943780 gactactcatttcccattcaaggactaaagtga 21943748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 250 - 390
Target Start/End: Complemental strand, 30100756 - 30100619
Alignment:
Q  250 atagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttagga 349  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||| |||   ||| |||||||||||||| ||||||||||||||||||||||||     
T  30100756 atagtccctgaatgtagactctgtttgtcactttagtccctgaaattgaataa---agtctacattcaaggattgttttgcaatttctctgcatttaggg 30100660  T
Q  350 actaaagtgactacttttttcccattcagggactaaagtga 390  Q
    | ||||||||||||| ||||| || | ||||||||||||||    
T  30100659 attaaagtgactactcttttctcacttagggactaaagtga 30100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 17497130 - 17497269
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  ||  |||||||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||||||||| ||| |    
T  17497130 tagtccctgaatgtagactccgtcggtcactttagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcaggga 17497229  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||| ||||||||  |||| |||||| ||||||||||||    
T  17497230 ctaaaatgactactcatttctcattcacggactaaagtga 17497269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 21211555 - 21211422
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||||| |  ||||||||||||||| |||||||||||| |||| ||| ||||||||  || | ||||||||||| |||||||| ||| |||||||    
T  21211555 ctgaatgtagattgcgttagtcactttagttcctgaaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaag 21211456  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||  ||||||||||||||||||||||||    
T  21211455 tgactactcatttcccattcagggactaaagtga 21211422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 246 - 390
Target Start/End: Original strand, 2555569 - 2555713
Alignment:
Q  246 caaaatagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcattt 345  Q
    |||| |||| |||||| |||||||  ||||||||||||| |||||||||||||| |||  ||| |||||||| ||| | ||||||||||| |||||||||    
T  2555569 caaattagtccctgaacgtagacttcgttagtcactttaatccctgaaattgaccaacgcagtctacattcagggactgttttgcaatttttctgcattt 2555668  T
Q  346 aggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||  |||||||| |||| || ||||||||||||||||||| ||||    
T  2555669 agagactaaagtaactaattatttcccattcagggactaacgtga 2555713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 19491807 - 19491946
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | |    
T  19491807 tagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagga 19491906  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    || ||||||||||| ||||| |||||||| ||||||||||    
T  19491907 cttaagtgactactcttttctcattcaggaactaaagtga 19491946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 20430014 - 20429882
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||| ||| |||| ||||||||||||| |||||||||| |||||||| ||||||||| || | |||||||||||||||||||  ||   ||||||     
T  20430014 tgaatgtaaactctgttcgtcactttagtccttgaaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagc 20429915  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    |||||||  |||| |||||||||||||||||||    
T  20429914 gactactcctttcacattcagggactaaagtga 20429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 288
Target Start/End: Complemental strand, 13753513 - 13753400
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| |||| ||||||   ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||     
T  13753513 gggagattagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgta 13753414  T
Q  275 agtcactttagtcc 288  Q
    ||||| ||||||||    
T  13753413 agtcaatttagtcc 13753400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 10760151 - 10760013
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  |||| ||| |||||||| |||||||||| |||| |||||||||||| ||| | |||| |||||||||| |||| |||||    
T  10760151 tagtccctgaatgtagactccgttaatca-tttagtccttgaaattgaccaacaaagtttacattcagggactgtttttcaatttctctacattcaggaa 10760053  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||| |||||  ||| ||| |||||||| |||||||    
T  10760052 ctaaagtggctactcattttccactcagggaccaaagtga 10760013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 10760252 - 10760173
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||||||||||    
T  10760252 cgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaatttagtccctgaa 10760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 21943988 - 21943909
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||  |||||||| ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  21943988 cgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactctgttaatcaatttagtccctgaa 21943909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 17497239 - 17497175
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||    
T  17497239 gtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtca 17497175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 390
Target Start/End: Complemental strand, 31912329 - 31912201
Alignment:
Q  262 tgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgact 361  Q
    |||||||| |||||||||||||||||| ||||||||||||||   || ||| || || || | |||| |||| |||||||||| ||| | |||| |||||    
T  31912329 tgtagactctgttagtcactttagtccatgaaattgactaacgttgtctacgttaaatgactgttttacaatgtctctgcattcagggattaaaatgact 31912230  T
Q  362 acttttttcccattcagggactaaagtga 390  Q
    | | |||||||||||| ||||||||||||    
T  31912229 attcttttcccattcaaggactaaagtga 31912201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 13753349 - 13753234
Alignment:
Q  275 agtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccat 374  Q
    ||||||||||||||||||||||||| |||||||| |||| |||   | | |||||||||||||||||||| |   |||||||||||||||  ||| | ||    
T  13753349 agtcactttagtccctgaaattgaccaacagagtctacactcagatactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctat 13753250  T
Q  375 tcagggactaaagtga 390  Q
    | ||||||||||||||    
T  13753249 ttagggactaaagtga 13753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 30100852 - 30100777
Alignment:
Q  218 attttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||  |||||||| ||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||    
T  30100852 attttaggtcctgaatgtagataaattgcaaaatagtccatgaatgcagactctgttaatcactttagtccctgaa 30100777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 13753405 - 13753503
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| ||||||| |||||| | ||| ||||||||||||| |||||||| ||  |||||| |||| |||| ||||| ||| ||||||||||||||    
T  13753405 aaattgacttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtga 13753503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 19491677 - 19491771
Alignment:
Q  188 tcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||||||||| |||| ||||||  | ||   |||||||  |||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  19491677 tcactttggtccctgaataggaaagaaattatcactttagtctatgaatgcagataaattgcaaaatagtttatgaatgtatactatgttagtca 19491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 2555479 - 2555546
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    |||||||||||||| || ||| |||||||||||||  ||||||||||||| ||||||||| |||||||    
T  2555479 tttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttagtcaatttagtc 2555546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 10760183 - 10760281
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| ||||||| |||||| | ||| ||||||||||||| |||||||| ||  |||||||||||  ||  ||||| ||||||||| ||||||||    
T  10760183 aaattgacttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaagtgacggctcatttcctattcagggattaaagtga 10760281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 17497031 - 17497108
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||| ||||||  |||||||||||||||||| | ||||||||| || ||||||||| |||||||| ||||    
T  17497031 gtcattttagtccatgaatgt-gataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaa 17497108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 32539411 - 32539326
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttct 337  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||| ||| | | | ||||||||  || | |||||||||||||    
T  32539411 tagttcttgaatgtagactatgttagtcactttagt-cctgaaattgattaatatactctacattcagagactgttttgcaatttct 32539326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 21211452 - 21211516
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| |||  ||||||||||||| |||| ||||    
T  21211452 gtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtca 21211516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 11298062 - 11297991
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctc-tgcatttaggaactaaagtgacta 362  Q
    ||||||||||||||||| ||  |||| ||||||||||||||||| || | |||| |||||||||||||||||    
T  11298062 aaattgactaacagagtctatgttcagggattattttgcaatttatcttacattcaggaactaaagtgacta 11297991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 21211643 - 21211604
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagt 254  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  21211643 gtcactttagtccctgaatgcagataaattgcaaaatagt 21211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 11298094 - 11298164
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaagga 321  Q
    ||||||||||||||||||| ||||| |||||||| ||  | ||||||||||||| ||| | ||||||||||    
T  11298094 tagttcctgaatgtagactctgttaatcactttaatctttaaaattgactaacaaagtcttcattcaagga 11298164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 19564900 - 19564830
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcacttta 284  Q
    ||||| |||||||| |||||| ||||||||||||||||||||  |||||||| |||  |||||||| ||||    
T  19564900 cgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaacttcgttagtcaattta 19564830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 30852646 - 30852692
Alignment:
Q  247 aaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  30852646 aaaatagttcctgaatgtaaactctgttagtcaatttagtccctgaa 30852692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 34419530 - 34419587
Alignment:
Q  230 gaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    ||||||||||||||||||||||||| ||||||||||   | ||||||||| |||||||    
T  34419530 gaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtc 34419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 34419624 - 34419681
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattca 317  Q
    |||||||||| |||| |||| ||||||||||||||||||| |||| ||| ||||||||    
T  34419624 aatgtagactctgttggtcattttagtccctgaaattgaccaacaaagtctacattca 34419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 21943778 - 21943842
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||| |||||||||||| ||||||||||| ||  | |||||||||||| |||||||||    
T  21943778 gtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtca 21943842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 34419583 - 34419531
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    |||||||||||||||  ||||||||| ||| ||||||||||||| ||||||||    
T  34419583 aaattgactaacagaacttacattcagggactattttgcaatttatctgcatt 34419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 43548938 - 43549046
Alignment:
Q  282 ttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcaggga 381  Q
    ||||| ||| |||||||| |||| ||| |||||||| | | | |||||||||||||||||| | | | ||||||||||||| ||  ||  ||||||| ||    
T  43548938 ttagttcctaaaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtgactatttccttttcattcagaga 43549037  T
Q  382 ctaaagtga 390  Q
    |||||||||    
T  43549038 ctaaagtga 43549046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 43549016 - 43548952
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||||| ||| |||||| ||||||||||| ||| | ||||||||||||||||| ||||    
T  43549016 gtcactttagtccttgattgcagagaaattgcaaaacagtacatgaatgtagactatgttggtca 43548952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 11297993 - 11298072
Alignment:
Q  215 gtcattttagtccctgaatgca-gataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||| |||||||| | |||||||||||||||| | ||||||  |||||| ||||||||| ||||||| |||||    
T  11297993 gtcactttagttcctgaatgtaagataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaa 11298072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 2555678 - 2555629
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    ||||||| || |||||||| ||||||||||| ||| ||||||||||||||    
T  2555678 tttagtctctaaatgcagaaaaattgcaaaacagtccctgaatgtagact 2555629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 19564831 - 19564920
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcaggga 381  Q
    ||||||||||||  |||||||||||||  | ||||||||||||| ||| |||| | | ||||||||||| |||  ||||| ||| |||||    
T  19564831 aaattgactaacgaagtttacattcaaaaactattttgcaatttatctccattcaaggactaaagtgacgactgatttcctatttaggga 19564920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 19491908 - 19491852
Alignment:
Q  223 agtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    ||||| |||||||||| ||||||||||| ||| | |||| ||||||| |||||||||    
T  19491908 agtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 19491852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 369
Target Start/End: Complemental strand, 19564793 - 19564682
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    |||||||||||||   ||| ||||||||||||||||||||||  | |||||| |||||| |   | | ||||||||||||| || ||| | | ||| |||    
T  19564793 ctgaatgtagactccattaatcactttagtccctgaaattgatcaccagagtctacatttagaaactgttttgcaatttctgtgtattaatggact-aag 19564695  T
Q  357 tgactactttttt 369  Q
    |||||||||||||    
T  19564694 tgactactttttt 19564682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 30852720 - 30852776
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttaca 313  Q
    ||||||||||| |  ||||||||||||||| | |||||||||| |||||||| ||||    
T  30852720 ctgaatgtagattccgttagtcactttagttcatgaaattgaccaacagagtctaca 30852776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 31912441 - 31912381
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    |||||||||||||| | |||| | |||||||| |||||| ||| |||||||||| ||||||    
T  31912441 cgtcattttagtccataaatgtaaataaattgtaaaataattcttgaatgtagattatgtt 31912381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 79; Significance: 8e-37; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 256 - 390
Target Start/End: Complemental strand, 974 - 841
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||| | |||||||||||||||||||| ||| ||||||    
T  974 cctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattc-aggactgttttgcaatttctctgcattcagggactaaa 876  T
Q  356 gtgactacttttttcccattcagggactaaagtga 390  Q
    |||||| || |||| ||||||||  ||||||||||    
T  875 gtgacttctctttttccattcagaaactaaagtga 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 256 - 390
Target Start/End: Complemental strand, 7438 - 7305
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||| | |||||||||||||||||||| ||| ||||||    
T  7438 cctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattc-aggactgttttgcaatttctctgcattcagggactaaa 7340  T
Q  356 gtgactacttttttcccattcagggactaaagtga 390  Q
    |||||| || |||| ||||||||  ||||||||||    
T  7339 gtgacttctctttttccattcagaaactaaagtga 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 1111 - 1033
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||||| |||||||| ||||||| ||||||||| |||||| ||||||| | ||| ||| |||||||||||||    
T  1111 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaa 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 7575 - 7497
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||||| |||||||| ||||||| ||||||||| |||||| ||||||| | ||| ||| |||||||||||||    
T  7575 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaa 7497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 871 - 934
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||||||||||| | |||||||    
T  871 gtcactttagtccctgaatgcagagaaattgcaaaacag-tcctgaatgtagactctattagtca 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 7335 - 7398
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||||||||||| | |||||||    
T  7335 gtcactttagtccctgaatgcagagaaattgcaaaacag-tcctgaatgtagactctattagtca 7398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 389
Target Start/End: Complemental strand, 59849 - 59711
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||| |||||  |||||||| |||||||||||||||||||||||||||| |||||||| ||  | |||||||||||||||||||| ||| |    
T  59849 tagtccctgaatgcagactccgttagtcaatttagtccctgaaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcaggga 59750  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtg 389  Q
    |||||||||||||   ||||||||| |||||||||||||    
T  59749 ctaaagtgactacacctttcccattgagggactaaagtg 59711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 59740 - 59804
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||| |||||||||    
T  59740 gtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtca 59804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 50335576 - 50335715
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  | || |||||||||||||| |||||||| |||||||| |||||||| ||| | ||||||||||| |||||||| ||| |    
T  50335576 tagtccctgaatgtagactccgctaatcactttagtccctaaaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcattcaggga 50335675  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
     |||||||||||||||||| |||||| |||||||||||||    
T  50335676 ttaaagtgactactttttttccattctgggactaaagtga 50335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 387
Target Start/End: Original strand, 11633243 - 11633401
Alignment:
Q  229 tgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattatttt 328  Q
    |||| |||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||| || ||||| | |||| | ||| | || |    
T  11633243 tgaaagcagataaattgtaaaatagttcatgaatgtagattatgttagtcactttagtccttgaaattgaccaatagagtctgcatttagggactgttat 11633342  T
Q  329 gcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaag 387  Q
     |||||||||| |||| |||||||||| ||||||||  ||| |||||||||||| ||||    
T  11633343 acaatttctctacattcaggaactaaaatgactactcattttccattcagggacaaaag 11633401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 390
Target Start/End: Original strand, 37608114 - 37608245
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    ||||||||||||  |||||||||||| ||||||||||||||| |||||  |||||||||| ||| | |||||||||||||||||||| ||| |||||| |    
T  37608114 tgaatgtagactccgttagtcactttggtccctgaaattgaccaacagt-tttacattcagggactgttttgcaatttctctgcattcagggactaaaat 37608212  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    |||||||  ||||||||||| ||||||||||||    
T  37608213 gactactcctttcccattcaaggactaaagtga 37608245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 8097859 - 8097720
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||||| |||| ||| || ||| |  || | ||||||||||||||||||||||| ||    
T  8097859 tagttcctgaatgtagactctgttagtcattttagtccttaaaattgaccaacatagtctatatttagagactgttttgcaatttctctgcatttagaaa 8097760  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||| |||||  |||| ||||||| |||||||||||    
T  8097759 ctaaagtggctactaatttctcattcagagactaaagtga 8097720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 390
Target Start/End: Original strand, 42847192 - 42847292
Alignment:
Q  290 tgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtg 389  Q
    ||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||| || ||| ||||||||||    
T  42847192 tgaaactgactaacaaagtctacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctatccagagactaaagtg 42847291  T
Q  390 a 390  Q
    |    
T  42847292 a 42847292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 50335436 - 50335554
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| |||||||  ||||| |||| ||||   | ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||    
T  50335436 gggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgtt 50335535  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||||||||    
T  50335536 agtcaatttagtccctgaa 50335554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 37608007 - 37608085
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||||||| ||||    
T  37608007 gtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgttagtcaatttagtccttgaa 37608085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 50335544 - 50335446
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||| |||||||| ||| ||||||||||| |||  ||||| ||||||||| ||||||||    
T  50335544 aaattgactaacaaagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtga 50335446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 13735589 - 13735704
Alignment:
Q  260 aatgtagactatgttagtcactttagtccctgaaattga-ctaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtg 358  Q
    ||||||||||  ||||||||||||||||||||||||||| | |||||||| |||||||| ||| | ||||||||||||| |||||| ||  |||||| ||    
T  13735589 aatgtagactccgttagtcactttagtccctgaaattgatcaaacagagtctacattcagggactgttttgcaatttctttgcattcagagactaaa-tg 13735687  T
Q  359 actacttttttcccatt 375  Q
    ||||||  |||||||||    
T  13735688 actactcctttcccatt 13735704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 13735479 - 13735558
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||| ||||||||| ||||||| |||||    
T  13735479 cgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaa 13735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 37608075 - 37607982
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaa 385  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| | |||||| ||| |||||| |||| | |  ||||| |||||||||||||    
T  37608075 aaattgactaacagagtctacattcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctattcagggactaa 37607982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 32374090 - 32373995
Alignment:
Q  290 tgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||||| ||| |||||||||| | | |||||||| |||| |||||  ||| |||||||||||||| | ||||| ||||||||||||||    
T  32374090 tgaaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactac-tctttcctattcagggactaaa 32373995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 37608215 - 37608165
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgta 265  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  37608215 gtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgta 37608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 8097954 - 8097881
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||||||  ||||||||| | ||||| |||| | ||||||||| |||||||| ||||    
T  8097954 tttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaatttagtccttgaa 8097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 50335685 - 50335621
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||| |||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||    
T  50335685 gtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtca 50335621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 13735548 - 13735469
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    ||||||||||||||||| ||||||   ||| ||||||| ||||| |||||||| ||| ||||||||||| |||| |||||    
T  13735548 aaattgactaacagagtctacattgtgggactattttgtaatttatctgcattcagggactaaagtgacgacttctttcc 13735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 8097891 - 8097989
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||| | || ||||| ||| |||||||  |||| |||||||| ||| ||||||||||  |||  ||||| ||| ||||||||||||||    
T  8097891 aaattgactaacagaatctatattcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttagggactaaagtga 8097989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 32374020 - 32374084
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||| ||||| | || |||||||| ||||| |||||||||||| |||||||||    
T  32374020 gtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgttagtca 32374084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 32374153 - 32374205
Alignment:
Q  310 tacattcaaggattattttgcaatttctctgcatttaggaactaaagtgacta 362  Q
    |||||||| ||| ||||||||||||| | |||||||||| |||||||||||||    
T  32374153 tacattcatggactattttgcaatttatttgcatttagggactaaagtgacta 32374205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 390
Target Start/End: Complemental strand, 42847110 - 42847030
Alignment:
Q  310 tacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| ||||||||| |||||| |||||||||| | |||||| |||  |||| ||||  ||||| ||||||||||||    
T  42847110 tacattcaaagattatttttcaatttatctgcatttatggactaaaatgaggacttctttcttattcaaggactaaagtga 42847030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 42847262 - 42847198
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||| |||||||||||||| ||||||||||| | | | |||||||||||| |||||||||    
T  42847262 gtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgttagtca 42847198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 13735685 - 13735631
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||| ||||||||| | ||||||||||| ||| |||||||||||||| ||||    
T  13735685 tttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgtt 13735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 32374203 - 32374153
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgta 265  Q
    |||| |||||||||| |||||| ||||||||||||||||| | ||||||||    
T  32374203 gtcactttagtccctaaatgcaaataaattgcaaaatagtccatgaatgta 32374153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 42847022 - 42847097
Alignment:
Q  180 gagattaatcactttggtcccttaataagaaagacgtc---attttagtccctgaatgcagataaattgcaaaata 252  Q
    ||||||| ||||||| |||| | ||||||||||| |||   |||||||||| | ||||||||||||||| ||||||    
T  42847022 gagattagtcactttagtccttgaataagaaagaagtcctcattttagtccataaatgcagataaattgaaaaata 42847097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 256 - 390
Target Start/End: Original strand, 13536701 - 13536835
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| || ||||| |||||||| ||| | |||||||||||||||| ||| ||  ||||||    
T  13536701 cctgaatgtagactctgttagtcactttagtccctgaaatggaccaatagagtctacattcagggactgttttgcaatttctctgtattcagagactaaa 13536800  T
Q  356 gtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||  |||| |||||| ||||||||||||    
T  13536801 gtgactactcctttctcattcaaggactaaagtga 13536835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 21222609 - 21222472
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| | | |    
T  21222609 tagtccctgaatgtagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaagga 21222510  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagt 388  Q
    || ||||||||||| ||||| |||||||| ||||||||    
T  21222509 cttaagtgactactcttttctcattcaggaactaaagt 21222472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 26705163 - 26705302
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||    |||||||||||||||||||||||||||| ||||  || |||||||| ||| | ||||||||||||||| |||| ||| |    
T  26705163 tagtccctgaatgtagaacccgttagtcactttagtccctgaaattgaccaacaacgtctacattcagggactgttttgcaatttctctacattcaggga 26705262  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||||| |||| ||||||||| ||||||||||    
T  26705263 ctaaagtgactactctttttccattcaggaactaaagtga 26705302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 10588010 - 10587892
Alignment:
Q  272 gttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||| ||| | |||||||||||||||||||| ||| |||||||||||||||  ||||     
T  10588010 gttagtcactttagtccctgaaattgaacaacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttct 10587911  T
Q  372 cattcagggactaaagtga 390  Q
    |||||| ||||||||||||    
T  10587910 cattcatggactaaagtga 10587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 19295425 - 19295286
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  ||| ||||||||||||||||||||||||||||| ||  || ||| | ||| | |||||||||||||| ||||| ||| |    
T  19295425 tagtccctgaatgtagactccgttggtcactttagtccctgaaattgactaacatagcctatatttagggactgttttgcaatttctcagcattcaggga 19295326  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  ||||| ||||| ||||||||||||    
T  19295325 ctaaagtgactactcctttcctattcaaggactaaagtga 19295286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 13536555 - 13536673
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| |||| |||||    ||||| |||| | |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  13536555 gggagattagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgtt 13536654  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||||||||    
T  13536655 agtcaatttagtccctgaa 13536673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 25089287 - 25089426
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||   |||||||||||||||| |||||||||| |||| ||| || ||||| | | | |||||||||||||||||||| ||  |    
T  25089287 tagtccctgaatgtagacttcattagtcactttagtccatgaaattgaccaacatagtctatattcaggaactgttttgcaatttctctgcattcagtga 25089386  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||| |  ||  ||||||||||||||||||||    
T  25089387 ctaaagtgactattcattgtccattcagggactaaagtga 25089426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 19295520 - 19295447
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||| |||||||||||||    
T  19295520 tttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgttagtcaatttagtccctgaa 19295447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 25089192 - 25089259
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  25089192 tttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtcaatttagtc 25089259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 13536663 - 13536565
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| |||||||| ||| | |||||||||  ||  ||||| ||||||||||||||||||    
T  13536663 aaattgactaacagagtctacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggactaaagtga 13536565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 21222746 - 21222631
Alignment:
Q  183 attaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgca--gataaattgcaaaatagttcctgaatgtagactatgttagt 277  Q
    |||| |||||||||||||| |||| ||||||   ||||| ||||||||||||||| |  ||||||||||||||||||  ||||||||| |||||||||||    
T  21222746 attagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagt 21222647  T
Q  278 cactttagtccctgaa 293  Q
    ||  |||||| |||||    
T  21222646 caacttagtctctgaa 21222631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 10588155 - 10588037
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaagacgt---cattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| |||| |||||  ||   || || ||||| |||||||||||||||||||||||||| | |||||||||||| | ||    
T  10588155 gggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttatt 10588056  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||| ||||    
T  10588055 agtcaatttagtccttgaa 10588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 10587922 - 10587981
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  10587922 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgtt 10587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 10672858 - 10672784
Alignment:
Q  218 attttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||| |||||    
T  10672858 attttagtctttgaatgcagataaattgcaaaatagttcctgaatgtaga-tttgttaatcaatttagtctctgaa 10672784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 10862148 - 10862258
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| |||||| |||| |||||||||||||||||||||||| || | ||| ||||||||   | | |||||||||||||||||||| ||| |    
T  10862148 tagtccctgaatatagactctgttcgtcactttagtccctgaaattgaccaata-agtctacattcagctactgttttgcaatttctctgcattcaggga 10862246  T
Q  351 ctaaagtgacta 362  Q
    ||||||| ||||    
T  10862247 ctaaagtaacta 10862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 10588047 - 10588145
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||| | ||| |||||||| ||| ||||||||||||| |||||||| | | ||| ||||||| |||  ||||| ||||||||||||||||||    
T  10588047 aaattgactaataaagtctacattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctattcagggactaaagtga 10588145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 25089255 - 25089157
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| |||||||| ||  ||||||||| | |||  | ||| ||||| ||||||||||||    
T  25089255 aaattgactaacagagtctacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggactaaagtga 25089157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 28752237 - 28752337
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaagacg---tcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||| | || |||||||| |   ||| |||||| |||||||||||||||||||||||||||| | |||||||||||| ||||    
T  28752237 gggagattagtcactttagtccttgaacaagaaagaagatgtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtt 28752336  T
Q  275 a 275  Q
    |    
T  28752337 a 28752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 25089396 - 25089332
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  25089396 gtcactttagtcactgaatgcagagaaattgcaaaacagttcctgaatatagactatgttggtca 25089332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 10862047 - 10862126
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| ||||||||||||||||| || ||||||||  |||| |||||||||||||| ||||||||| || | ||||||||    
T  10862047 cgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgttagtcaattcaatccctgaa 10862126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 19295457 - 19295555
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| | |||||| ||| ||||||| ||||| |||||||| ||| |||||||| || |||  ||| | |||||| |||||||||||    
T  19295457 aaattgactaacagagtctgcattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcagagactaaagtga 19295555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 28752337 - 28752247
Alignment:
Q  300 taacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| |||||||| ||| ||||||||||||| |||||||| ||| |||||||||||  ||| ||||   |||| ||||||||||||    
T  28752337 taacagagtctacattcatggactattttgcaatttatctgcattcaggtactaaagtgacatcttctttcttgttcaaggactaaagtga 28752247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 10672762 - 10672627
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||  |||||||||| |||| ||||||||| || |||| ||| |||||||| ||| | ||||  ||||| | ||||||     |    
T  10672762 tagtccctgaatgtagacttcgttagtcactatagttcctgaaatttaccaacatagtctacattcagggactgttttataatttttatgcattcgaaga 10672663  T
Q  351 ctaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||||  |||| |||||||||| ||||    
T  10672662 ctaaagtgactactcatttctcattcagggattaaa 10672627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 10862251 - 10862202
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    ||||||||||||||||||| ||||||||||| |||  |||||||||||||    
T  10862251 tttagtccctgaatgcagagaaattgcaaaacagtagctgaatgtagact 10862202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 26705272 - 26705219
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagac 268  Q
    |||| ||||||||||||||| ||| ||||||||||| ||| |||||||||||||    
T  26705272 gtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagac 26705219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 19295316 - 19295380
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||||||||||||| || ||||||||||| ||| ||| ||| ||| ||||||||||||    
T  19295316 gtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgttagtca 19295380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 13536805 - 13536751
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagact 269  Q
    |||| ||||||| |||||| |||| ||||||||||| ||| ||||||||||||||    
T  13536805 gtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagact 13536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 21222644 - 21222741
Alignment:
Q  295 ttgactaacagagtttacattcaaggattattttgcaatttctctg--catttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||| ||| ||||||||  || ||||||||||||| |||   |||| ||| ||||||||||| | || ||||| |||||||||| |||||||    
T  21222644 ttgactaacatagtatacattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttcctattcagggaccaaagtga 21222741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 10862115 - 10862022
Alignment:
Q  293 aattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    |||||||||||||||| |||||||| ||| ||  ||||||||  | |||||| ||| ||||||||||| |||  |||  ||||||| |||||||    
T  10862115 aattgactaacagagtctacattcagggactacattgcaattaatttgcattcagggactaaagtgacgactccttttacattcagagactaaa 10862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 12651258 - 12651310
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    |||||||||||| |||| || |||||| |||||||| ||||||| ||||||||    
T  12651258 aaattgactaacggagtctatattcaaagattatttagcaatttatctgcatt 12651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 21222508 - 21222564
Alignment:
Q  223 agtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    ||||| |||||||||| ||||||||||| ||| | |||| ||||||| |||||||||    
T  21222508 agtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 21222564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 390
Target Start/End: Complemental strand, 22018020 - 22017887
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||| |||  |||| |||||||||||| |||||||||| |||||| | |||||||| ||| | |||||||||||||||||||| ||| |||||||    
T  22018020 ctgaatgtatactccgttaatcactttagtccttgaaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagggactaaag 22017921  T
Q  357 tgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||  ||||||||||||||| ||||||||    
T  22017920 tgactactcctttcccattcagggattaaagtga 22017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 30470955 - 30470826
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |   |||||| | ||| | |||||||||||||||||||| ||||||||||||    
T  30470955 tgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaatgctacatttagggagtgttttgcaatttctctgcattcaggaactaaagt 30470856  T
Q  358 gactacttttttcccattcagggactaaag 387  Q
    |||||||  |||||| |||||| |||||||    
T  30470855 gactactcatttcccgttcaggaactaaag 30470826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 5448331 - 5448470
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||   |||||||||||||| |||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||| ||| |    
T  5448331 tagtccctgaatatagacttcattagtcactttagttcctgaaattgaccaacagagtttacattcagggactgttttgcaatttctctgcattcaggga 5448430  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||| | |||| | ||||| ||| ||||||||    
T  5448431 ctaaagtgactattctttttcgattcacggagtaaagtga 5448470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 5324820 - 5324688
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||| ||| |||| |||||||||||||||||||||||| |||||||| ||||||||| || | |||||||||||||||||||  ||   ||||||     
T  5324820 tgaatgtaaactctgttcgtcactttagtccctgaaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagc 5324721  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    |||||||  |||| |||||||||||||||||||    
T  5324720 gactactcctttcacattcagggactaaagtga 5324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 18830718 - 18830580
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||   ||||||||||||||||||||||||||| |||||| | |||||||| ||| | ||| ||||||| |||||||  ||| |    
T  18830718 tagtccctgaatgtagactccattagtcactttagtccctgaaattgaccaacagaatctacattcagggactgtttagcaatttatctgcatccagg-a 18830620  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  |||| |||||||||||||||||||    
T  18830619 ctaaagtgactactcatttctcattcagggactaaagtga 18830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 47463933 - 47463819
Alignment:
Q  276 gtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccatt 375  Q
    ||||||||||||||||||||| |  |||||||| ||||||||| || | ||||||||||| |||||||| ||| |||||||||||||||  ||||||||     
T  47463933 gtcactttagtccctgaaatttatcaacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatc 47463834  T
Q  376 cagggactaaagtga 390  Q
    |||||||||||||||    
T  47463833 cagggactaaagtga 47463819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 22018134 - 22018016
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||||| |||| ||||   | ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22018134 gggagattagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgtt 22018035  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||  ||||||| |||||    
T  22018034 agtctatttagtctctgaa 22018016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 2634168 - 2634029
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||||||| || | ||| |||||||| ||| | |||||||||||||| |||||  |       
T  2634168 tagtccctgaatgtagactttgttaatcactttagtcgctgaaattgaccaataaagtctacattcagggactgttttgcaatttctcagcattcggcgg 2634069  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||||||| ||||| |||||| ||||||||||||    
T  2634068 ctaaagtgactactcttttctcattcatggactaaagtga 2634029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 10757714 - 10757575
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| ||||| ||||| || ||||||| |||||| |||| ||| ||||| || ||| | ||||||||||| ||| |||| ||| |    
T  10757714 tagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccatggactgttttgcaatttatctacattcaggga 10757615  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  |||| |||||||||||||||||||    
T  10757614 ctaaagtgactactcatttctcattcagggactaaagtga 10757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 10970885 - 10970746
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| ||||| ||||| || ||||||| |||||| |||| ||| ||||| || ||| | ||||||||||| ||| |||| ||| |    
T  10970885 tagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccatggactgttttgcaatttatctacattcaggga 10970786  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||  |||| |||||||||||||||||||    
T  10970785 ctaaagtgactactcatttctcattcagggactaaagtga 10970746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 279 - 369
Target Start/End: Original strand, 3391170 - 3391260
Alignment:
Q  279 actttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactactttttt 369  Q
    |||||||||| ||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||| ||  ||||||||||||||||||||    
T  3391170 actttagtccttgaaattgactaacaaagtctacattcaatgattgttttgcaatttctctgcattcagagactaaagtgactactttttt 3391260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 256 - 390
Target Start/End: Original strand, 9826772 - 9826906
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaa 355  Q
    ||||||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | ||| ||    
T  9826772 cctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaa 9826871  T
Q  356 gtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||| |||||  ||||||| ||||||||||    
T  9826872 gtgactactcttttctgattcaggaactaaagtga 9826906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 11821865 - 11821999
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattca-ag---gattattttgcaatttctctgcatttaggaacta 353  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||| || ||||| ||   |||| |||||||||||||||||||| ||| ||||    
T  11821865 tgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaagtctaaattcagagattgattgttttgcaatttctctgcattcagggacta 11821964  T
Q  354 aagtgactacttttttcccattcagggactaaagt 388  Q
    |||| | ||||  ||||||||| | ||||||||||    
T  11821965 aagtaagtactcatttcccattgaaggactaaagt 11821999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 2063281 - 2063420
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| |||||||| | |||||||||||||||||  | |||||||| |||||||| |||||||| ||| |  ||||||||||||||||| | | | |    
T  2063281 tagtccctaaatgtagaatttgttagtcactttagtctttaaaattgaccaacagagtctacattcagggactgctttgcaatttctctgcaatcaagga 2063380  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
     |||||||||||||  ||||||||||| ||||||||||||    
T  2063381 ttaaagtgactactcatttcccattcaaggactaaagtga 2063420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 37695044 - 37694905
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| |||||| | ||||||||||||||| || |||||||| |||| | | |||||||| ||| | |||||||||||||||||||| ||| |    
T  37695044 tagtccctgaatatagactctattagtcactttagtcacttaaattgaccaacacaatctacattcagggactgttttgcaatttctctgcattcaggga 37694945  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||   ||| || |||| |||||||||||    
T  37694944 ctaaagtgactactccattctcactcagtgactaaagtga 37694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 1387422 - 1387286
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    ||||||| |||||||||||  ||||||||||||||||||| | ||||||||||| | | |||||||||||| |  |||| |||||||||||||| | | |    
T  1387422 tagttccggaatgtagacttcgttagtcactttagtccctaatattgactaaca-aatatacattcaaggactgctttgtaatttctctgcattcatgga 1387324  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagt 388  Q
    ||||| |||||||| ||||| |||||| |||| |||||    
T  1387323 ctaaaatgactactcttttctcattcatggaccaaagt 1387286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 2232515 - 2232377
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| |||||||||||||| | ||| ||||||||||||||||||||||| |||||| | |||||| | ||||| |||||||||||||||  ||| ||| |    
T  2232515 tagtccctgaatgtagacttt-ttaatcactttagtccctgaaattgaccaacagaatctacattgagggattgttttgcaatttctctctattcaggga 2232417  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||| ||||||||  |||  |||| ||| ||||||||||    
T  2232416 ctaaattgactactcatttttcatttaggaactaaagtga 2232377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 5448232 - 5448307
Alignment:
Q  216 tcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctg 291  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||| ||||||||| |||||||||||    
T  5448232 tcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtcaatttagtccctg 5448307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 362
Target Start/End: Complemental strand, 10380739 - 10380633
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| ||||||||||  |||||||||||||||||||||||||||| |||| |||||||||     || | |||||||||||||||||||| || ||    
T  10380739 tagtccctaaatgtagactcagttagtcactttagtccctgaaattgaccaacaaagtttacat-----gactgttttgcaatttctctgcattcagaaa 10380645  T
Q  351 ctaaagtgacta 362  Q
    ||||||||||||    
T  10380644 ctaaagtgacta 10380633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 18830819 - 18830740
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||  |||||||||||||    
T  18830819 cgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgttagtccatttagtccctgaa 18830740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 30471063 - 30470984
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||| |||||||| |||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  30471063 cgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgttaatcaatttagtccctgaa 30470984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 9826632 - 9826731
Alignment:
Q  183 attaatcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||||||||||| |||| ||||||  | ||   |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  9826632 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 9826731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 2634308 - 2634190
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| |||| | |||||||||   | | ||| ||||||| ||||||| ||||||||||| |||||||  ||||||||||||| ||||    
T  2634308 gggagattagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgtt 2634209  T
Q  275 agtcactttagtccctgaa 293  Q
    ||||| |||||||||||||    
T  2634208 agtcaatttagtccctgaa 2634190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 55382801 - 55382725
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccct 290  Q
    ||||| |||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  55382801 cgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttagtcaattttgtccct 55382725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 382
Target Start/End: Complemental strand, 18836423 - 18836293
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||   |||||||||||||||| | |||||||| ||||| ||| ||||| | ||| | ||||| ||||| |||||||| ||| |    
T  18836423 tagtccctgaatgtagactccattagtcactttagtccataaaattgaccaacagcgttaacatttagggactgttttg-aatttatctgcattcaggga 18836325  T
Q  351 ctaaagtgactacttttttcccattcagggac 382  Q
    ||||||||||||||  |||| |||||||||||    
T  18836324 ctaaagtgactactcatttctcattcagggac 18836293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 3370000 - 3370078
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||| ||||||| ||||||||||||||||||||   | |||||||||| ||||||||| |||||||||||||    
T  3370000 gtcattttagttcctgaatccagataaattgcaaaatagtcattaaatgtagactctgttagtcaatttagtccctgaa 3370078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 47943624 - 47943718
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||||||  ||| |||||||| ||| ||||||||||||| |||||||||| | ||||||||||| |||  ||||| ||||||||||||||    
T  47943624 aaattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattcagggactaaa 47943718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 47943587 - 47943503
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctg 340  Q
    |||||||||||||||||||| ||||| |||||||| |||||||| |||| | | ||||||||| || ||||||| ||||||||||    
T  47943587 cctgaatgtagactatgttaatcactatagtccctaaaattgaccaacaaaatctacattcaatgactattttgtaatttctctg 47943503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 47943693 - 47943621
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagt 286  Q
    ||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||    
T  47943693 cgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggttagtcaatttagt 47943621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 11821826 - 11821736
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggac 382  Q
    ||||| ||||||||||| ||||||||| || ||||||||||||| |||| ||||| | ||||||||||| |||| ||||| ||| ||||||    
T  11821826 aaattaactaacagagtctacattcaaagactattttgcaatttatctgtatttaaggactaaagtgacgacttctttcctatttagggac 11821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 30470994 - 30471092
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||| ||||| ||| |||||||| ||| |||||| |||||| ||| |||| ||||||||||||||| ||| |||| | |||||| |||||||||||    
T  30470994 aaattgattaacatagtctacattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctattcagagactaaagtga 30471092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 55382732 - 55382830
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| ||| ||||||||  || ||||||||||||| |||||||| ||| | ||||||||| |||  ||||| ||||| ||||||||||||    
T  55382732 aaattgactaacaaagtctacattcagagactattttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtga 55382830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 10380834 - 10380761
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||| ||||||||||||||||||||  || |||||||||| ||||||||| |||| ||||||||    
T  10380834 tttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgttagtcaatttaatccctgaa 10380761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 29908923 - 29908996
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtc 287  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||    
T  29908923 cgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagtcaatttagtc 29908996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 12140804 - 12140672
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||| | ||||||||| |||||||||| ||||||| ||||| ||| || ||| | ||| | ||||||||||||| |||||| | | | ||||||    
T  12140804 tgaatgtagaatttgttagtcattttagtccctaaaattgattaacaaagtctatatttagggactgttttgcaatttctttgcattcaaggattaaagt 12140705  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
    ||| |||| |||| |||| | ||| ||||||||    
T  12140704 gacgacttatttctcatttaaggattaaagtga 12140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 18830750 - 18830818
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgac 360  Q
    |||| |||||||||| | |||||||||||| ||||||||||||| |||||||| ||| |||||||||||    
T  18830750 aaatggactaacagaatctacattcaaggactattttgcaatttatctgcattcagggactaaagtgac 18830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 37695171 - 37695107
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcacttta 284  Q
    |||||||| |||||||||||||||||||||||| |  ||||||||||||| ||||||||| ||||    
T  37695171 tttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgttagtcaattta 37695107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 1387626 - 1387513
Alignment:
Q  179 ggagattaatcactttggtcccttaataagaaaga---cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtta 275  Q
    |||||||| | ||||| |||||| |||| ||||||   | ||||||||| |||||||||||||||||||| |||||| | |||||||||||| | ||||     
T  1387626 ggagattagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttc 1387527  T
Q  276 gtcactttagtccc 289  Q
     ||| |||||||||    
T  1387526 atcaatttagtccc 1387513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 3370068 - 3369989
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcc 371  Q
    ||||||||||||||||| |||||| || || ||||||||||||| |||| ||| |||||||||| |||| |||| |||||    
T  3370068 aaattgactaacagagtctacatttaatgactattttgcaatttatctggattcaggaactaaaatgacaacttctttcc 3369989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 5448299 - 5448204
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaag 387  Q
    |||||||||||||||||||||||||| ||  |||||| |||||| |||||||| ||| |||||| |||  |||  ||||| ||||||||| |||||    
T  5448299 aaattgactaacagagtttacattcaggggctattttacaatttatctgcattcagggactaaaatgatgactcctttcctattcagggaataaag 5448204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 11821757 - 11821836
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||| |||||||| | ||| ||||||||||||||||||||   |||||||||||| ||||||| | |||||||||||||    
T  11821757 cgtcactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctgaa 11821836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 18500733 - 18500824
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgca 342  Q
    |||| ||||||| |||||| ||||| ||||||||||| ||||||||||| |||||  | |||||||||| | | |||| |||||||||||||    
T  18500733 tagtccctgaatttagactctgttaatcactttagtctctgaaattgaccaacagtatctacattcaagaactgttttacaatttctctgca 18500824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 18836523 - 18836444
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaa-tagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| ||||||||||||||||||| ||||||||||| || | |||||| ||||||| ||||||||  |||||||||||||    
T  18836523 gtcactttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaa 18836444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 359
Target Start/End: Original strand, 37695108 - 37695175
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtga 359  Q
    ||||||||||||||||| ||||||||  |||||||||||||||| |||||||| | | ||||||||||    
T  37695108 aaattgactaacagagtctacattcagagattattttgcaatttatctgcattcaaggactaaagtga 37695175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 2063249 - 2063151
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| ||||||||||||| || ||||||  ||||| |||||||| | |||| |||||| | |||  |||||  |||||||||||||||||    
T  2063249 aaattgactaacatagtttacattcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttcagggactaaagtga 2063151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 8951164 - 8951058
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||||||| ||||||||||  |||||||| ||||||  || |||||||| ||| |||| ||||||||| || | ||||||||||||| | |||| ||| |    
T  8951164 tagttccttaatgtagacttcgttagtcattttagtttcttaaattgaccaactgagtctacattcaaagactgttttgcaatttctttacattcaggga 8951065  T
Q  351 ctaaagt 357  Q
    |||||||    
T  8951064 ctaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 349
Target Start/End: Original strand, 47144824 - 47144922
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttagga 349  Q
    ||||||||||||| |||||  ||| ||||||||||||| ||||||||||||||| |||||| ||| |  || | ||||||||||| | |||||| ||||    
T  47144824 tagttcctgaatgcagactccgttggtcactttagtccttgaaattgactaacaaagtttatatttagagactgttttgcaatttatttgcattcagga 47144922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 2232615 - 2232538
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctg 291  Q
    ||||| |||||||||| |||| | |||||||| |||||||| | | |||||||||||||||||||| |||| ||||||    
T  2232615 cgtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatccctg 2232538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 37694935 - 37695004
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcacttta 284  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| | |||| |||| ||||    
T  37694935 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgttggtcaattta 37695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 5448440 - 5448376
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||||||| ||||||||||| ||| |||||||||| ||| |||| ||||    
T  5448440 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttggtca 5448376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 10757605 - 10757669
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||| ||||||||||||||| ||| | || |||||||||||||| ||||    
T  10757605 gtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 10970776 - 10970840
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||||||||||| ||||||||||||||| ||| | || |||||||||||||| ||||    
T  10970776 gtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10970840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 30378948 - 30379012
Alignment:
Q  326 tttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||||| ||| |||||||||||||||  ||||| ||| || |||||||||||    
T  30378948 tttgcaatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtga 30379012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 18836454 - 18836525
Alignment:
Q  292 aaattgactaacagagtttacattcaaggatta-ttttgcaatttctctgcatttaggaactaaagtgacta 362  Q
    |||| |||||||||||| ||| |||| |||||| ||||||||||| |||||||| ||| |||||||||||||    
T  18836454 aaatggactaacagagtctacgttcagggattacttttgcaatttttctgcattcagggactaaagtgacta 18836525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 47463849 - 47463908
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    |||| ||||||||||||||||||||||||||||||| |||   |||||||||||| ||||    
T  47463849 gtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgtt 47463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 10380771 - 10380869
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| |||||| |  || ||||||||||||| |||| ||| |||  ||||||| || |||| ||| | ||||| ||||||||||||    
T  10380771 aaattgactaacagagtctacatttagagactattttgcaatttatctgaattcaggggctaaagttacgacttattttctattcaaggactaaagtga 10380869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 22017917 - 22017967
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgta 265  Q
    |||| ||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  22017917 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgta 22017967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 22018026 - 22018124
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||| |||||||| ||| |||||||| ||| ||||||||||||| |||||||| ||  || ||| |||| |||  ||||| ||| ||||||||||||||    
T  22018026 aaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagagacgaaaatgacgactcatttcctatttagggactaaagtga 22018124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 30378738 - 30378855
Alignment:
Q  178 gggagattaatcactttggtccc--ttaataagaaagacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtta 275  Q
    ||||||||||||||||||||||   |||  || | || | ||| ||||||||||| ||| | |||||||||||||||||  ||||||| ||||| |||||    
T  30378738 gggagattaatcactttggtcctgattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgtta 30378837  T
Q  276 gtcactttagtccctgaa 293  Q
    |||| || |||| |||||    
T  30378838 gtcaattcagtctctgaa 30378855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 8951226 - 8951161
Alignment:
Q  221 ttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagt 286  Q
    ||||| |||||||  |||||||| | ||||||||||||||||||||| | ||||||||| ||||||    
T  8951226 ttagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgttagtcaatttagt 8951161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 2063195 - 2063259
Alignment:
Q  229 tgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||||||  ||||||||   |||||||| ||||||||||||| ||||||| |||||    
T  2063195 tgaatgcagataaattataaaatagtcattgaatgtaaactatgttagtcaatttagtctctgaa 2063259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 2232546 - 2232614
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgac 360  Q
    ||||||||||||| ||| |||||| ||||| |||||| |||||| | | |||||||| |||||||||||    
T  2232546 aaattgactaacatagtctacattgaaggactattttacaatttatttacatttagggactaaagtgac 2232614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9826732 - 9826637
Alignment:
Q  295 ttgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||| ||| ||||||||   | ||||||||||||| |||||||| | | ||||||||||  | || ||||| |||||||||| |||||||    
T  9826732 ttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtga 9826637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 18500706 - 18500743
Alignment:
Q  256 cctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  18500706 cctgaatgtagactctgttagtcaatttagtccctgaa 18500743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 55382660 - 55382587
Alignment:
Q  313 attcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||||||| |  ||||||||||||||||||| | | |||||||||||||||  ||| ||||||| | ||||||    
T  55382660 attcaaggactgctttgcaatttctctgcattcacggactaaagtgactactcattttccattcaagaactaaa 55382587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 1387480 - 1387444
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  1387480 ctgaatgtagactttgttagtcactttagttcctgaa 1387444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 3391251 - 3391187
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| ||||||| ||||||||||| ||||||||||| | |   |||||||||||| |||||||||    
T  3391251 gtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtca 3391187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 1485 - 1624
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||||||||||   |||||||| ||| ||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| | | |    
T  1485 tagtccctgaatgtagactcaattagtcacattaatccttgaaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaagga 1584  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    || ||||||||||| ||||| |||||||| ||||||||||    
T  1585 cttaagtgactactcttttctcattcaggaactaaagtga 1624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 1429 - 1362
Alignment:
Q  323 tattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||| |||||||||||| ||||||||||  | || ||||| ||||| ||||||||||||    
T  1429 tattttgcaatttatctgcatttagggactaaagtgataatttatttcctattcaaggactaaagtga 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1397 - 1431
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagt 254  Q
    |||||||||| ||||||||||||||||||||||||    
T  1397 tttagtccctaaatgcagataaattgcaaaatagt 1431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 1586 - 1530
Alignment:
Q  223 agtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    ||||| |||||||||| ||||||||||| ||| | |||| ||||||| |||||||||    
T  1586 agtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 190322 - 190187
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||| |||||| ||||||||| ||| |||| |||||||||||||| |||||||| ||||||||  || | |||||||||||||||||||| ||  |    
T  190322 tagtccctaaatgtaaactatgttaatcaatttaatccctgaaattgaccaacagagtctacattcagagactgttttgcaatttctctgcattcagaga 190223  T
Q  351 ctaaagtgactacttttttcccattcagggactaaa 386  Q
    ||||| |||||||| |||||||||||||||||||||    
T  190222 ctaaaatgactactcttttcccattcagggactaaa 190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 190417 - 190344
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||||||| |||||||||||||||||||| || |||  ||||| ||||||||| |||||| ||||||    
T  190417 tttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgttagtcaatttagttcctgaa 190344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 190213 - 190277
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||||||| ||||||||||| ||||||||||| |||  ||||||||||||| |||| ||||    
T  190213 gtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttggtca 190277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 64; Significance: 7e-28; HSPs: 4)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 257 - 391
Target Start/End: Original strand, 11714 - 11846
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||| | | |||||||||||||||||||| ||||||||||| ||||| ||  || ||||| |||||||||||||||||||||| ||| |||||||    
T  11714 ctgaatgtatattctgttagtcactttagtccctaaaattgactaagagagtcta--tttaaggactattttgcaatttctctgcattcagggactaaag 11811  T
Q  357 tgactacttttttcccattcagggactaaagtgat 391  Q
     |||||||  ||||||||||||  |||||||||||    
T  11812 cgactactcatttcccattcagaaactaaagtgat 11846  T

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Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 11601 - 11718
Alignment:
Q  178 gggagattaatcactttggtcccttaataagaaa---gacgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgtt 274  Q
    ||||||||| ||||||| ||| || |||| ||||   | ||| |||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||    
T  11601 gggagattagtcactttagtcactgaataggaaatgagtcgttattttagtcc-taaatgcagataaattgtaaaatagtccctgaatgtagactatgtt 11699  T
Q  275 agtcactttagtccctgaa 293  Q
    || || |||| || |||||    
T  11700 aggcaatttaatctctgaa 11718  T

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Target: scaffold0047; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 11708 - 11611
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||| |||||| ||| |||||||| ||| |||||| |||||| |||||||||||| |||||| | || |||  ||||| |||||| |||||||||||    
T  11708 aaattgcctaacatagtctacattcagggactattttacaatttatctgcatttagg-actaaaataacgactcatttcctattcagtgactaaagtga 11611  T

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Target: scaffold0047; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 11810 - 11776
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagt 254  Q
    ||||||||||||||||||| |||||||||||||||    
T  11810 tttagtccctgaatgcagagaaattgcaaaatagt 11776  T

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Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 390
Target Start/End: Original strand, 57584 - 57723
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaa 350  Q
    |||| ||||||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | |    
T  57584 tagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattaaagta 57683  T
Q  351 ctaaagtgactacttttttcccattcagggactaaagtga 390  Q
    || ||||||||||| |||||  ||||||| ||||||||||    
T  57684 cttaagtgactactcttttctgattcaggaactaaagtga 57723  T

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Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 57454 - 57548
Alignment:
Q  188 tcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||||||||||||| |||| ||||||  | ||   |||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  57454 tcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtca 57548  T

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Target: scaffold0102 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 390
Target Start/End: Original strand, 24034 - 24165
Alignment:
Q  258 tgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagt 357  Q
    |||||||||||| | || |||||||| |||| |||||||||| |||||| | |||||||| ||||| |||||||||||||||||||| ||| ||||||      
T  24034 tgaatgtagactttattcgtcacttttgtccatgaaattgaccaacagaatctacattcagggattgttttgcaatttctctgcattcagggactaaaac 24133  T
Q  358 gactacttttttcccattcagggactaaagtga 390  Q
     |||||| |||| ||||||||||| ||||||||    
T  24134 aactactctttt-ccattcagggattaaagtga 24165  T

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Target: scaffold0102; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 23932 - 24005
Alignment:
Q  220 tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||| |||||  |||||||||||||||| || || |||||||||||| |||||||| |||||||||||||    
T  23932 tttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacgttagtcaatttagtccctgaa 24005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 24132 - 24084
Alignment:
Q  219 ttttagtccctgaatgcagataaattgcaaaatagttcctgaatgtaga 267  Q
    |||||||||||||||||||| ||||||||||| | | ||||||||||||    
T  24132 ttttagtccctgaatgcagagaaattgcaaaacaatccctgaatgtaga 24084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 390
Target Start/End: Original strand, 127947 - 128078
Alignment:
Q  259 gaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtg 358  Q
    |||| ||||||  ||||||||| ||| ||| ||||||||||||||||||| ||| |||||| | | |||||||||||||||||||| | | ||| |||||    
T  127947 gaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtg 128046  T
Q  359 actacttttttcccattcagggactaaagtga 390  Q
    |||||| |||||  ||||||| ||||||||||    
T  128047 actactcttttctgattcaggaactaaagtga 128078  T

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Target: scaffold0024; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 127804 - 127903
Alignment:
Q  183 attaatcactttggtcccttaataagaaagacgtcat---tttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtca 279  Q
    |||| |||||||||||||| |||| ||||||  | ||   |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  127804 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 127903  T

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Target: scaffold0024; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 127904 - 127809
Alignment:
Q  295 ttgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    |||||||||| ||| ||||||||   | ||||||||||||| |||||||| | | ||||||||||  | || ||||| |||||||||| |||||||    
T  127904 ttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtga 127809  T

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Target: scaffold0039 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 390
Target Start/End: Complemental strand, 27630 - 27494
Alignment:
Q  254 ttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaacta 353  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||| |||||||| |||||| |  || | |||||||||||||| | ||| |||  |||    
T  27630 ttcctgaatgtagacttcgttcgtcactttagtccttgaaattgaccaacagagtctacattaagagactgttttgcaatttctccgtattcaggggcta 27531  T
Q  354 aagtgactacttttttcccattcagggactaaagtga 390  Q
    |||| ||||||  ||| | ||||||||||||||||||    
T  27530 aagtaactactcattttctattcagggactaaagtga 27494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 314126 - 314191
Alignment:
Q  228 ctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||||||    
T  314126 ctgaatgcagattaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaa 314191  T

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Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 314213 - 314277
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacatt 315  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| || |||||||| ||||||    
T  314213 tagtccctgaatgtagagtctgttagtcactttagtccctgaaattaaccaacagagtctacatt 314277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 314181 - 314129
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatt 344  Q
    ||||||||||||||||| |||||| | ||| ||||||||||||  ||||||||    
T  314181 aaattgactaacagagtctacatttagggactattttgcaattaatctgcatt 314129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 72106 - 72185
Alignment:
Q  311 acattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||| ||| | |||||||||||||   |||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  72106 acattcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtga 72185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 71942 - 71995
Alignment:
Q  214 cgtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtaga 267  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  71942 cgtcactttaatccctgaatgcagataaattgcaaaatagtccctgaatataga 71995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 72017 - 72103
Alignment:
Q  251 tagttcctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttct 337  Q
    |||| |||||||| | ||| ||||||||| ||||||||||||||||||| | || | | |||||||| ||| | |||||||||||||    
T  72017 tagtccctgaatgcaaactttgttagtcaatttagtccctgaaattgaccatcaaaatctacattcagggactgttttgcaatttct 72103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 15400 - 15478
Alignment:
Q  215 gtcattttagtccctgaatgcagataaattgcaaaatagttcctgaatgtagactatgttagtcactttagtccctgaa 293  Q
    |||| |||||||| ||||||||||||||||| ||||||||  ||||||||||||| ||||||||| |||| || |||||    
T  15400 gtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttagtcaatttaatctctgaa 15478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 388
Target Start/End: Original strand, 15506 - 15632
Alignment:
Q  257 ctgaatgtagactatgttagtcactttagtccctgaaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaag 356  Q
    ||||||||||| | ||| ||||  |||||| ||||||||||||||||| |||    ||||| ||| | |||||||||||||||||||| ||  ||||||     
T  15506 ctgaatgtagattctgtcagtcgttttagtacctgaaattgactaacaaagt----attca-ggactgttttgcaatttctctgcattcagagactaaat 15600  T
Q  357 tgactacttttttcccattcagggactaaagt 388  Q
    ||||| || || ||||||||| ||||||||||    
T  15601 tgacttctattctcccattcatggactaaagt 15632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 15468 - 15370
Alignment:
Q  292 aaattgactaacagagtttacattcaaggattattttgcaatttctctgcatttaggaactaaagtgactacttttttcccattcagggactaaagtga 390  Q
    ||||||||||||||||| ||||||||  || |||||| |||||| |||||||| | | ||||||||||| |||  ||||  |||||  |||||||||||    
T  15468 aaattgactaacagagtctacattcagagactattttacaatttatctgcattcaaggactaaagtgacaactcatttctaattcaaagactaaagtga 15370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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