View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10551_low_6 (Length: 366)

Name: NF10551_low_6
Description: NF10551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10551_low_6
NF10551_low_6
[»] chr3 (33 HSPs)
chr3 (1-347)||(15795948-15796294)
chr3 (273-348)||(55401122-55401197)
chr3 (276-347)||(41961579-41961650)
chr3 (277-341)||(14216957-14217021)
chr3 (277-341)||(14223086-14223150)
chr3 (275-348)||(10954999-10955075)
chr3 (271-347)||(40993270-40993346)
chr3 (275-341)||(27505305-27505371)
chr3 (278-347)||(4987222-4987291)
chr3 (274-347)||(13845463-13845536)
chr3 (276-348)||(7171548-7171620)
chr3 (274-330)||(17276792-17276848)
chr3 (276-348)||(20503512-20503584)
chr3 (276-340)||(34185052-34185116)
chr3 (275-326)||(25074864-25074915)
chr3 (276-327)||(40052380-40052431)
chr3 (276-341)||(5440967-5441033)
chr3 (278-336)||(28918062-28918120)
chr3 (277-347)||(8789489-8789561)
chr3 (276-337)||(49651716-49651777)
chr3 (278-342)||(29508503-29508567)
chr3 (276-347)||(14209172-14209243)
chr3 (276-331)||(21211358-21211413)
chr3 (276-347)||(25064966-25065037)
chr3 (278-348)||(25775556-25775624)
chr3 (276-347)||(35222986-35223057)
chr3 (276-314)||(8842410-8842448)
chr3 (273-311)||(8903519-8903557)
chr3 (274-311)||(4990910-4990947)
chr3 (277-334)||(15999951-16000008)
chr3 (277-338)||(32804485-32804546)
chr3 (298-347)||(34307737-34307786)
chr3 (276-347)||(52369834-52369906)
[»] scaffold0003 (1 HSPs)
scaffold0003 (276-347)||(241653-241724)
[»] chr7 (27 HSPs)
chr7 (275-348)||(598255-598328)
chr7 (276-341)||(5409771-5409836)
chr7 (276-348)||(15680856-15680928)
chr7 (276-348)||(21880199-21880271)
chr7 (276-348)||(33994259-33994331)
chr7 (276-341)||(32093954-32094020)
chr7 (276-347)||(24339701-24339772)
chr7 (277-347)||(20549839-20549909)
chr7 (275-341)||(43027403-43027469)
chr7 (276-341)||(2334314-2334379)
chr7 (276-341)||(9778559-9778624)
chr7 (276-339)||(17852056-17852119)
chr7 (277-347)||(32287404-32287474)
chr7 (277-347)||(32308179-32308249)
chr7 (275-340)||(21864863-21864928)
chr7 (274-311)||(29812596-29812633)
chr7 (298-342)||(8234199-8234243)
chr7 (274-334)||(29763127-29763187)
chr7 (275-341)||(1433513-1433579)
chr7 (277-342)||(3554447-3554512)
chr7 (276-313)||(23746985-23747022)
chr7 (275-348)||(24105725-24105798)
chr7 (273-310)||(30813882-30813919)
chr7 (296-332)||(3294264-3294300)
chr7 (276-347)||(7133212-7133284)
chr7 (276-340)||(11738151-11738215)
chr7 (281-341)||(13770750-13770810)
[»] chr6 (29 HSPs)
chr6 (277-342)||(17841530-17841595)
chr6 (276-348)||(28152145-28152217)
chr6 (276-348)||(6898221-6898293)
chr6 (276-348)||(28715342-28715414)
chr6 (276-347)||(8365448-8365519)
chr6 (276-347)||(10339054-10339125)
chr6 (276-341)||(17327590-17327655)
chr6 (276-348)||(4877990-4878061)
chr6 (276-348)||(34595181-34595253)
chr6 (276-335)||(8776908-8776967)
chr6 (276-341)||(9629448-9629513)
chr6 (275-347)||(16766756-16766828)
chr6 (277-341)||(31384984-31385048)
chr6 (274-340)||(17435265-17435331)
chr6 (276-341)||(3209453-3209518)
chr6 (279-348)||(32978842-32978911)
chr6 (273-325)||(7938170-7938222)
chr6 (276-324)||(13360313-13360361)
chr6 (276-348)||(24645528-24645600)
chr6 (276-347)||(7378027-7378098)
chr6 (279-326)||(9025448-9025495)
chr6 (276-347)||(16488519-16488590)
chr6 (275-341)||(32839570-32839637)
chr6 (276-347)||(33001229-33001300)
chr6 (274-348)||(7977768-7977842)
chr6 (276-341)||(29020966-29021032)
chr6 (274-340)||(33818023-33818089)
chr6 (298-347)||(9522950-9522999)
chr6 (274-310)||(7723197-7723233)
[»] chr4 (35 HSPs)
chr4 (276-348)||(23292926-23292998)
chr4 (276-348)||(34306744-34306816)
chr4 (276-336)||(19482738-19482798)
chr4 (276-336)||(29205527-29205587)
chr4 (275-348)||(12895213-12895286)
chr4 (276-348)||(16073441-16073513)
chr4 (276-348)||(35157925-35157997)
chr4 (276-348)||(49431073-49431145)
chr4 (276-347)||(22234819-22234890)
chr4 (276-334)||(3064868-3064926)
chr4 (276-341)||(28964188-28964253)
chr4 (277-341)||(3947702-3947766)
chr4 (279-330)||(28084589-28084640)
chr4 (276-339)||(35161092-35161155)
chr4 (276-334)||(715545-715603)
chr4 (276-334)||(752871-752929)
chr4 (276-326)||(3144587-3144636)
chr4 (276-342)||(8423658-8423724)
chr4 (278-340)||(19312401-19312463)
chr4 (277-347)||(30982808-30982878)
chr4 (276-348)||(2361915-2361987)
chr4 (277-341)||(14465006-14465070)
chr4 (276-324)||(16184902-16184950)
chr4 (275-311)||(18844422-18844458)
chr4 (281-341)||(30838275-30838335)
chr4 (289-348)||(4157483-4157542)
chr4 (278-348)||(4157196-4157266)
chr4 (276-342)||(40179576-40179642)
chr4 (277-342)||(848015-848080)
chr4 (276-341)||(5414101-5414166)
chr4 (278-327)||(22440559-22440608)
chr4 (276-341)||(36635384-36635449)
chr4 (277-334)||(44081508-44081565)
chr4 (276-312)||(20633554-20633590)
chr4 (276-347)||(53381530-53381602)
[»] chr1 (31 HSPs)
chr1 (275-347)||(32461392-32461464)
chr1 (276-348)||(37598878-37598950)
chr1 (276-348)||(22515827-22515899)
chr1 (276-348)||(46348323-46348395)
chr1 (276-348)||(51410072-51410144)
chr1 (274-348)||(18337376-18337450)
chr1 (276-342)||(18556385-18556451)
chr1 (276-348)||(38078601-38078673)
chr1 (278-341)||(1486646-1486709)
chr1 (276-347)||(6427523-6427594)
chr1 (276-347)||(40917808-40917879)
chr1 (276-342)||(5898206-5898272)
chr1 (277-347)||(12918993-12919063)
chr1 (276-341)||(9828109-9828174)
chr1 (278-331)||(17778617-17778670)
chr1 (278-347)||(29163323-29163392)
chr1 (299-342)||(28674853-28674896)
chr1 (276-347)||(47989556-47989627)
chr1 (278-348)||(42359391-42359461)
chr1 (276-337)||(5944352-5944413)
chr1 (278-342)||(16297223-16297287)
chr1 (290-342)||(40181924-40181976)
chr1 (276-311)||(9630561-9630596)
chr1 (276-347)||(25934675-25934746)
chr1 (277-348)||(40258874-40258945)
chr1 (275-341)||(19562555-19562620)
chr1 (277-347)||(21032265-21032335)
chr1 (276-318)||(21365992-21366034)
chr1 (276-310)||(46940748-46940782)
chr1 (276-348)||(1815304-1815376)
chr1 (276-347)||(34741894-34741965)
[»] scaffold0512 (1 HSPs)
scaffold0512 (274-348)||(4974-5048)
[»] chr8 (28 HSPs)
chr8 (273-347)||(15816055-15816129)
chr8 (272-348)||(36450690-36450766)
chr8 (274-347)||(22652035-22652108)
chr8 (276-348)||(29510233-29510305)
chr8 (278-341)||(3025605-3025668)
chr8 (274-341)||(21465477-21465544)
chr8 (274-341)||(24413497-24413564)
chr8 (280-348)||(5813639-5813707)
chr8 (274-341)||(39820482-39820549)
chr8 (276-347)||(34450961-34451032)
chr8 (276-334)||(11944737-11944795)
chr8 (275-341)||(24858070-24858136)
chr8 (284-341)||(126295-126352)
chr8 (276-341)||(8343381-8343446)
chr8 (276-341)||(16641909-16641974)
chr8 (279-348)||(40332238-40332307)
chr8 (276-347)||(11927015-11927086)
chr8 (275-334)||(18964251-18964310)
chr8 (289-336)||(22943302-22943349)
chr8 (279-310)||(24727684-24727715)
chr8 (278-348)||(926730-926800)
chr8 (274-347)||(3951474-3951547)
chr8 (276-325)||(7472461-7472510)
chr8 (276-337)||(18407777-18407838)
chr8 (276-341)||(26902104-26902169)
chr8 (274-347)||(28745557-28745630)
chr8 (277-342)||(29447040-29447105)
chr8 (275-311)||(31514938-31514974)
[»] chr2 (27 HSPs)
chr2 (276-338)||(26769579-26769641)
chr2 (274-347)||(35056927-35057000)
chr2 (274-342)||(27084322-27084390)
chr2 (277-348)||(28596516-28596587)
chr2 (278-348)||(2438661-2438731)
chr2 (276-348)||(38117099-38117171)
chr2 (281-348)||(12224270-12224337)
chr2 (276-347)||(37419802-37419873)
chr2 (274-341)||(42511320-42511387)
chr2 (274-340)||(30717457-30717523)
chr2 (276-341)||(34993922-34993987)
chr2 (276-348)||(18840953-18841025)
chr2 (276-347)||(24009343-24009414)
chr2 (285-348)||(29176442-29176505)
chr2 (276-346)||(11223793-11223862)
chr2 (276-348)||(15972920-15972992)
chr2 (274-330)||(19980740-19980796)
chr2 (276-348)||(37559024-37559096)
chr2 (276-311)||(10535685-10535720)
chr2 (276-347)||(21782744-21782815)
chr2 (289-347)||(28524485-28524543)
chr2 (276-310)||(29176368-29176402)
chr2 (275-340)||(18420362-18420427)
chr2 (273-342)||(19580222-19580291)
chr2 (275-348)||(30404789-30404862)
chr2 (276-341)||(41843500-41843565)
chr2 (278-342)||(19942318-19942382)
[»] chr5 (35 HSPs)
chr5 (275-340)||(21576684-21576749)
chr5 (276-348)||(43564928-43565000)
chr5 (276-347)||(39698600-39698671)
chr5 (276-341)||(31084382-31084447)
chr5 (276-340)||(14873577-14873641)
chr5 (279-347)||(39268541-39268609)
chr5 (278-341)||(43001859-43001922)
chr5 (278-348)||(21190998-21191068)
chr5 (278-347)||(30502330-30502399)
chr5 (278-347)||(30542673-30542742)
chr5 (274-326)||(2436980-2437032)
chr5 (280-335)||(30183620-30183675)
chr5 (276-342)||(11686002-11686068)
chr5 (276-338)||(16304366-16304428)
chr5 (278-336)||(24238603-24238661)
chr5 (276-342)||(27932288-27932354)
chr5 (274-347)||(21522809-21522882)
chr5 (274-347)||(21533375-21533448)
chr5 (277-341)||(3966568-3966632)
chr5 (278-338)||(23015926-23015986)
chr5 (276-328)||(35017110-35017162)
chr5 (273-328)||(17593660-17593715)
chr5 (278-341)||(19579766-19579829)
chr5 (276-347)||(21814320-21814391)
chr5 (280-347)||(30098982-30099049)
chr5 (156-207)||(39809747-39809798)
chr5 (289-347)||(15382533-15382591)
chr5 (276-342)||(17123101-17123166)
chr5 (277-347)||(21542089-21542159)
chr5 (274-340)||(41091184-41091250)
chr5 (276-341)||(30098391-30098456)
chr5 (276-341)||(32630675-32630740)
chr5 (277-341)||(6401563-6401627)
chr5 (275-347)||(7677764-7677836)
chr5 (276-332)||(15410377-15410433)
[»] scaffold0053 (1 HSPs)
scaffold0053 (276-348)||(8845-8917)
[»] scaffold0361 (1 HSPs)
scaffold0361 (276-342)||(14580-14646)
[»] scaffold0652 (1 HSPs)
scaffold0652 (277-348)||(403-474)
[»] scaffold0136 (1 HSPs)
scaffold0136 (276-347)||(3778-3849)
[»] scaffold0050 (1 HSPs)
scaffold0050 (274-348)||(70325-70399)
[»] scaffold0450 (1 HSPs)
scaffold0450 (276-347)||(8564-8635)
[»] scaffold0019 (1 HSPs)
scaffold0019 (276-347)||(71784-71855)
[»] scaffold0793 (1 HSPs)
scaffold0793 (276-334)||(4821-4879)
[»] scaffold0380 (1 HSPs)
scaffold0380 (276-334)||(8662-8720)
[»] scaffold0171 (1 HSPs)
scaffold0171 (276-342)||(23575-23641)
[»] scaffold0475 (1 HSPs)
scaffold0475 (276-341)||(3362-3427)
[»] scaffold0004 (1 HSPs)
scaffold0004 (277-342)||(92875-92940)
[»] scaffold0057 (1 HSPs)
scaffold0057 (276-347)||(24083-24155)
[»] scaffold0623 (1 HSPs)
scaffold0623 (277-342)||(5926-5991)
[»] scaffold0306 (1 HSPs)
scaffold0306 (278-347)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (278-347)||(21804-21873)
[»] scaffold0008 (1 HSPs)
scaffold0008 (278-347)||(263303-263372)
[»] scaffold0316 (1 HSPs)
scaffold0316 (275-347)||(16193-16265)
[»] scaffold0168 (2 HSPs)
scaffold0168 (276-312)||(21113-21149)
scaffold0168 (276-312)||(21371-21407)
[»] scaffold0086 (1 HSPs)
scaffold0086 (275-335)||(2999-3059)
[»] scaffold0083 (1 HSPs)
scaffold0083 (276-348)||(45470-45542)
[»] scaffold0044 (1 HSPs)
scaffold0044 (283-347)||(53239-53303)


Alignment Details
Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 15795948 - 15796294
Alignment:
Q  1 aaacagaagatgggagagagaacaaggacgcagagatgctacagaagacatgtcagaagacttatcagaaggagaaaaaggtgacaatgttgttgacatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15795948 aaacagaagatgggagagagaacaaggacgcagagatgctacagaagacatgtcagaagacttgtcagaaggagaaaaaggtgacaatgttgttgacatg 15796047  T
Q  101 gtacaaagtgagactccaagacaaagattccaacgacaaacttctaatttagaagtatggtctgatgataaaaatgaaaagaagctttatattgtcctca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15796048 gtacaaagtgagactccaagacaaagattccaacgacaaacttctaatttagaagtatggtctgatgataaaaatgaaaagaagctttatattgtcctca 15796147  T
Q  201 taaggtaagcacattcatcttttgctaaaatattgagtacacaaactccttaggcttaggccttaggtagtgtagctatgaagcacgaacacttctcgga 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||  | |||    
T  15796148 taaggtgagcacattcatcttttgctaaaatattgagtacacaaactccttaggcttaggccttaggcagagtagctatgaagcacgaacactctttgga 15796247  T
Q  301 ttaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||  | ||||||||||||||| |||||||||||||||||    
T  15796248 ttaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 55401197 - 55401122
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  55401197 tagctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacact 55401122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 41961579 - 41961650
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 10955075 - 10954999
Alignment:
Q  275 gctatgaagcacgaacacttctc---ggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||||| ||||| |||   |||||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  10955075 gctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacact 10954999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 40993270 - 40993346
Alignment:
Q  271 tgtagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||| |||||||||| | ||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||| ||||    
T  40993270 tgtacctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 27505371 - 27505305
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||||| ||||| |||||||||||| |||| | |||| |||||||||||||||| |||||    
T  27505371 gctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 4987222 - 4987291
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||| ||| ||||| ||||||||||||||||| | |||| ||||||||||||||||| ||||| ||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 13845463 - 13845536
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| ||||| || |||| ||||||||||| ||||  ||||||| |||||||||||||| ||||    
T  13845463 agctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 7171620 - 7171548
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||   ||||| || |||||||||||||| | |||| ||||||||||||||||||||||| |||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacact 7171548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 17276848 - 17276792
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc 330  Q
    |||||||||||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  17276848 agctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc 17276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 20503584 - 20503512
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||  |||| ||||||||||| ||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacact 20503512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 34185052 - 34185116
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| |||||| |||| |||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 25074915 - 25074864
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacg 326  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||| |||||||    
T  25074915 gctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 25074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 40052431 - 40052380
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgt 327  Q
    |||||||||||||||||| ||||||||||||||||| | |||| ||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 5440967 - 5441033
Alignment:
Q  276 ctatgaagcacgaacacttctcggattagg-cgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| |||| |||||| |||||||| |||||||||| |||||||||| |||||    
T  5440967 ctatgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacac 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 28918120 - 28918062
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtcc 336  Q
    |||||||| | ||||| || |||||||||||||| |||||| |||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 8789489 - 8789561
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggaca--cgtgtcgtgtccgacacctacac 347  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||  ||||   ||||||||||||||||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacac 8789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 49651716 - 49651777
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccg 337  Q
    |||||||||||| ||||||||||||||||| ||||| | |||| ||| | ||||||||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 29508567 - 29508503
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||| |||||||| ||||||| |||||| | |||| ||||  |||||||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacacc 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 14209243 - 14209172
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| |||||||| |||||||| || || |  ||| | ||||||||||||||||||||| ||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 21211413 - 21211358
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcg 331  Q
    ||||||||||| |||||| ||||||||||| ||||| |||||| ||||||| ||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcg 21211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 25065037 - 25064966
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||| |||||||||||| ||||||| |  |||||| | ||||  |||||||||||||||||||||| ||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 25775624 - 25775556
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||||| |||||||||||||||||   |||| ||||||  | ||||||||||||| |||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacact 25775556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 35223057 - 35222986
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||||||| | ||||||| | ||||  |||||||||| ||||||||||| ||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacac 35222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 8842448 - 8842410
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctca 314  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctca 8842410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 8903557 - 8903519
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  8903557 tagctatgaagcacgaacactcctcggattaggtgtgtc 8903519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 4990910 - 4990947
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  4990910 agctatgaagcacggacactcctcggattaggcgtgtc 4990947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    ||||| ||||| ||||| || |||||||||||||| | |||| |||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 32804485 - 32804546
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccga 338  Q
    ||||||||||| ||||| ||| |||||||||| | ||||||  ||||| |||||||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 34307737 - 34307786
Alignment:
Q  298 ggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||||||||| | | | ||||||||||||||||||| ||||    
T  34307737 ggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacac 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 52369906 - 52369834
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc-gtgtccgacacctacac 347  Q
    |||||||||||| ||||| |||||| |||| ||||| | |||||||||||| ||| |||||||| ||| ||||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcggtgtccgataccgacac 52369834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 241724 - 241653
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 598328 - 598255
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||| |||||| |||||    
T  598328 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacact 598255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 5409771 - 5409836
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 15680928 - 15680856
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| |||| ||||| |||||||| |||| ||||||||||||||||||||||| |||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacact 15680856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 21880271 - 21880199
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| |||||||||||||||||||||||   |||| ||||| ||||||||||||||||| |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacact 21880199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 33994331 - 33994259
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||| |||||||||| || |||||||||||||||| |||||||||| |||||||||| |||||| |||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacact 33994259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 32093954 - 32094020
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgt-ctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||||||| |||||||||||||||| | | |||| ||||||||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 24339772 - 24339701
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||  |||| ||||||||||||||||| | |||| ||| ||||||||||||||||||| ||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 20549909 - 20549839
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||  |||| |||||||||||||||||||| ||| ||||| |||| |||||||||||| ||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacac 20549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 43027403 - 43027469
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||||| |||||  |||||||||||||||| | |||| |||||||||||||||| |||||    
T  43027403 gctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 2334379 - 2334314
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||| |||| ||||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 9778624 - 9778559
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| || |||||||||||||| | |||| |||||||||| |||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 17852119 - 17852056
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgac 339  Q
    |||||||||||| ||||| |||| |||||| ||||||| |||| ||||||||||| ||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 32287404 - 32287474
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||| ||||| ||||||||||| ||||| | |||| |||||| |||| ||||||||||| ||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacac 32287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 32308249 - 32308179
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||| ||||||| ||||||||||  ||||||| |||| ||||| ||||||||||| ||||| ||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacac 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 21864928 - 21864863
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||||||||||  ||||| |||| ||||| |||||| | |||| |||||||||||||||||||||    
T  21864928 gctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgaca 21864863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 29812596 - 29812633
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29812596 agctatgaagcacggacacttctcggattaggcgtgtc 29812633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 8234243 - 8234199
Alignment:
Q  298 ggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacacc 8234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 29763127 - 29763187
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||||| ||||| |||||||||||||||||    ||| |||||||||||||||    
T  29763127 agctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 1433579 - 1433513
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||||| ||||| |||||||||| ||||||   |||| |||||| |||| ||||||||||    
T  1433579 gctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 3554447 - 3554512
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||  |||||  ||| ||||| |||||||||||||| || | |||||||||||||||||    
T  3554447 tatgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacacc 3554512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 23747022 - 23746985
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctc 313  Q
    ||||||| || |||||||||||||||||||||||||||    
T  23747022 ctatgaaacaggaacacttctcggattaggcgtgtctc 23746985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 24105798 - 24105725
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| |||||| ||||| ||||||||||| | |||| |||||| ||| ||| ||||| || |||||    
T  24105798 gctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacact 24105725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 30813919 - 30813882
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgt 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  30813919 tagctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 3294264 - 3294300
Alignment:
Q  296 tcggattaggcgtgtctcagtgttggacacgtgtcgt 332  Q
    |||||||||||||||| | ||||||||||||||||||    
T  3294264 tcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 7133212 - 7133284
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc-gtgtccgacacctacac 347  Q
    |||||||||||| || || ||| ||||||| ||||| |||||| ||||||| ||| |||||||||||| ||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 11738151 - 11738215
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||||| |||| ||||| ||| |||||||||||||||||||| | |||||| || | |||||||    
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgtctcatttccgaca 11738215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  281 aagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||| |||||  |||||||||||||||  | |||| |||||||||| |||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 17841530 - 17841595
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacacc 17841595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 28152217 - 28152145
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||||||| |||||||||||| |||| | |||| ||||||||||||||||||||||| |||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacact 28152145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 6898221 - 6898293
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||||||||  |||||||||||||| |||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacact 6898293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 28715414 - 28715342
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| |||||||||| |||||||||||| | |||| | ||||||||||||||||||||| |||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacact 28715342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 8365448 - 8365519
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| | ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 10339054 - 10339125
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 17327590 - 17327655
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||  |||||||||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 4878061 - 4877990
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||| |||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccgacaccgacact 4877990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 34595253 - 34595181
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||| ||||| | ||||  |||||||||||||||||||||| |||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacact 34595181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 8776908 - 8776967
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtc 335  Q
    |||||||||||| ||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 9629513 - 9629448
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||| | ||||| |||||||||| ||||||||||||| |||||| ||| |||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 16766828 - 16766756
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||| ||| |  |||||||||||||||| | |||| |||||||||| |||||||||||| ||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 31385048 - 31384984
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||| || |||||||||||||| | |||| ||||||||||||||||| ||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 17435331 - 17435265
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    |||||||||| ||| |||||| || |||||| |||||| |||||| | |||||||||||||||||||    
T  17435331 agctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgaca 17435265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 3209518 - 3209453
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| |||||| |||||||||||||||||   |||| |||| |||||||||| ||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacac 3209453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 32978842 - 32978911
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||| ||||| || ||||||| |||||| | |||| ||||| ||||||||||||||||| |||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacact 32978911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 7938222 - 7938170
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacac 325  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||| ||||||    
T  7938222 tagctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 13360313 - 13360361
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggaca 324  Q
    |||||||||||| |||||  ||||||||||||||||||||||| |||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca 13360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 24645600 - 24645528
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||  |||||  ||||||||| |||||||  |||| |||||||||||||||| |||||| |||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacact 24645528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 7378098 - 7378027
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||||||| |||||| |||||| | |||| |||  | |||||||||||||||| ||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacac 7378027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacg 326  Q
    ||||||||| ||||||||||||||||||||||| | |||| |||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 16488519 - 16488590
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||||| | || |||| ||||||||| | |||   |||||||||||||||||||||| ||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 32839570 - 32839637
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcag-tgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||||  ||||||||||||||||||||||| | | |||| ||||| |||| ||||||||||    
T  32839570 gctatgaagcacagacacttctcggattaggcgtgtcccggttgttagacacatgtcttgtccgacac 32839637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 33001229 - 33001300
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||| ||||||  | ||||||||||| | || ||||  |||||||||||||||||||||| ||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacac 33001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 7977768 - 7977842
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||||||||| ||  |||||||||||| ||  ||| |||||  ||| |||||||||||| |||||    
T  7977768 agctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacact 7977842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 29021032 - 29020966
Alignment:
Q  276 ctatgaagcacgaacacttc-tcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||| | ||||||  |||||||||||||| ||| |||| | ||||||||||||||||||||    
T  29021032 ctatgaagcatggacacttaatcggattaggcgtgcctcggtgtcgaacacgtgtcgtgtccgacac 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 33818089 - 33818023
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||||||| |||  ||||| ||| |||||||| |||||||||||| |||||| | |||||||||||    
T  33818089 agctatgaatcacagacactcctcagattaggcatgtctcagtgttagacacgcgacgtgtccgaca 33818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 9522999 - 9522950
Alignment:
Q  298 ggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||||| |||| ||||||||||||  ||||||||| ||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacac 9522950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 7723197 - 7723233
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgt 310  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  7723197 agctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 23292926 - 23292998
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||| |||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacact 23292998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 34306744 - 34306816
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||||| | ||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacact 34306816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 19482798 - 19482738
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtcc 336  Q
    |||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtcc 19482738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 29205587 - 29205527
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtcc 336  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 12895213 - 12895286
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||||||||||| ||||||||||||||||| |  ||| ||| || |||||||||||||||| |||||    
T  12895213 gctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacact 12895286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 16073513 - 16073441
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||| | ||||| |||||||||||||||||| ||||| ||||| || |||||||||||||| |||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacact 16073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 35157925 - 35157997
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||||||||||||| ||||||  | |||||||||| |||||||||| |||||| |||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacact 35157997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 49431145 - 49431073
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||| ||||| | ||||| ||||||| ||||||||| | |||||||||||||||||||||||||||| |||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacact 49431073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 22234819 - 22234890
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||||||||||||||||||  |||||   |||| |||||||||||||||| |||||| ||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 3064868 - 3064926
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||| ||||| ||||||||||||||||||||| || ||||| |||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 28964188 - 28964253
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||| | ||||| ||||||||||||||||| |||||| ||| | ||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacac 28964253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||| ||||||||||| |||||   |||| ||||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc 330  Q
    ||||||||| ||||| ||||||||||||||||| |||||| |||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 35161155 - 35161092
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgac 339  Q
    |||||||||||| |||||| |||||||||| ||||  | |||| ||||||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgac 35161092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 715545 - 715603
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||| |||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 752871 - 752929
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||| |||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 3144587 - 3144636
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacg 326  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  3144587 ctatgaagcacggacacttctcggattaggtgtgtctc-gtgttggacacg 3144636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 8423658 - 8423724
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||| ||||| ||||||||| ||||||||||||| | |||| |||||  ||||||||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacacc 8423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 19312463 - 19312401
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||| |||| ||||||||| |||||| |||||||| |||| ||||||||||||| |||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgaca 19312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||| |||||  | |||||||||||||| | |||| |||||||||||||||| |||||| ||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 2361915 - 2361987
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| |||||  || ||||||| ||||||| ||||  |||||| ||||||||||||||| |||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacact 2361987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||| ||| |||||| |||||| |||||| | |||||||||||||| |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 16184950 - 16184902
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggaca 324  Q
    ||||||||||| |||||| ||||||||||||||||| |||||| |||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 18844422 - 18844458
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18844422 gctatgaagcacggacacttctcggattaggcgtgtc 18844458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 30838335 - 30838275
Alignment:
Q  281 aagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||| ||||| ||||| ||||||||||||  |||| |||||||||||| |||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacac 30838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 4157542 - 4157483
Alignment:
Q  289 acacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||| |||| ||||||||| |||| |||| ||||| ||||||||||||||||| |||||    
T  4157542 acactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacact 4157483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 4157266 - 4157196
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||  ||||| |||| |||||| || |||| |||| ||||| ||||||||||||||||| |||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacact 4157196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 40179576 - 40179642
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||| ||||||||| | |||||||||||||||||||   |||| | ||| |||||||||||||||||    
T  40179576 ctatcaagcacgaataattctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacacc 40179642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 848080 - 848015
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||| |||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||||||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 5414101 - 5414166
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| || |||| ||| ||||| | ||||  |||||||||||||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacac 5414166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgt 327  Q
    |||||||||| ||||| |||||||||||||||||  ||||| ||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 36635449 - 36635384
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| |||||  |||||||||||||||| | ||||  ||| ||||||||||| |||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac 36635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 44081508 - 44081565
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||||||||  || |||||| | ||||||||||| | |||||||||||||    
T  44081508 tatgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacgtgtcgtgt 44081565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 20633590 - 20633554
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtct 312  Q
    |||||||||||||||||| || |||||||||||||||    
T  20633590 ctatgaagcacgaacactccttggattaggcgtgtct 20633554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc-gtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||||||||||| ||||| | |||| ||| ||| ||| |||||||||||| ||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 32461392 - 32461464
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||||||| ||||    
T  32461392 gctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 37598950 - 37598878
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||||||||| || ||| ||||||||||||||||||||||| |||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacact 37598878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 22515827 - 22515899
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| ||| | ||||||||||||||||| |||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacact 22515899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 46348323 - 46348395
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacact 46348395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 51410144 - 51410072
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||| ||| || |||||||||||||||| |||| ||| ||||||||||||||||||| |||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacact 51410072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 18337450 - 18337376
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||| ||||| ||||||| |||| |||| |||||| |||||||||| |||||||||||| |||||    
T  18337450 agctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacact 18337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 18556385 - 18556451
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||| ||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacacc 18556451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 38078601 - 38078673
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||| ||| |||||||||||||||||   |||||| ||| ||||||||||||||||| |||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacact 38078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 1486646 - 1486709
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||  ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 6427594 - 6427523
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| |||||  || ||||||||||||| | |||| |||||||||||||||||||| |||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacac 6427523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 40917879 - 40917808
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||| | ||||||||||||||||| | |||| ||||||||||||||||| ||||| ||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 5898206 - 5898272
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||| ||||||| ||||| |||||||||| |||||| | ||||||||||||||||||||| ||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacacc 5898272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 12919063 - 12918993
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||||||||||||||| || |||||| | ||||  |||||||||||||||||| ||| ||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacac 12918993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 9828174 - 9828109
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| |||||||||| |||||| | |||| |||||||||||||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacac 9828109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcg 331  Q
    ||||||||||||||||||||||||||||| |||| | |||| ||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 29163323 - 29163392
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||||||||| |||||| |||||| | ||||  | |||||||||||||||||||| ||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacac 29163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 28674896 - 28674853
Alignment:
Q  299 gattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  28674896 gattaggcgtgtctcagtgttggacaagtgtcgtgtctgacacc 28674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 47989627 - 47989556
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||||||||||||||||| |  |||  |||| ||||||||||||||||| ||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 42359391 - 42359461
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||| ||||| ||||||||||||||||| | |||| ||||||  ||| ||||||||||| |||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacact 42359461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 5944413 - 5944352
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccg 337  Q
    |||||||||||||||||| |||||||||||||| || | |||| ||||| |||| |||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccg 5944352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||| ||||| |||||||||||||||||   |||| ||||||  |||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 40181976 - 40181924
Alignment:
Q  290 cacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||| ||||||||||||||||| | |||| |||||||||| ||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacacc 40181924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 9630561 - 9630596
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    |||||||||||||||||| |||||||||||||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtc 9630596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 25934746 - 25934675
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| || |||| |||||| || | ||||  |||||||||||||||||||||| ||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 40258874 - 40258945
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||| | ||||| |||||||||||||||||   |||| ||||| |||||||||| |||||| |||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacact 40258945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 19562555 - 19562620
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||| |||| ||||||||||| ||||| | |||| |||||||||| || ||||||||    
T  19562555 gctatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacac 19562620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 21032335 - 21032265
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||  ||||| || ||||||||||| ||||  ||| |||||| |||||||||||||||| ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacac 21032265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 21365992 - 21366034
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgt 318  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgt 21366034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Original strand, 46940748 - 46940782
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgt 310  Q
    |||||||||||||||||| ||||||||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgt 46940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 1815376 - 1815304
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||| ||||  |||| ||| ||||||||||||| | |||| ||||| |||||||||| |||||| |||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacact 1815304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 34741965 - 34741894
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacg-tgtcgtgtccgacacctacac 347  Q
    |||||||||||| |||||  |||||||||||||||| | |||| ||||||| ||||||||| |||||| ||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtc-ccgtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 4974 - 5048
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||  ||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||    
T  4974 agctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacact 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 15816055 - 15816129
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||| |||  |||||||||||||||||| ||||    
T  15816055 tagctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 36450690 - 36450766
Alignment:
Q  272 gtagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||||||  ||||| |||||||||||||||||   |||| ||||||| |||||||||||||||||||||    
T  36450690 gtagctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacact 36450766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 22652108 - 22652035
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| ||||| |||||||||| |||||| | |||| |||||| |||||||||||||||| ||||    
T  22652108 agctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 29510233 - 29510305
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||| ||||| | |||| ||||||| ||||||||||||||| |||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 3025668 - 3025605
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||| ||||| |||||||||| |||||| ||||||  |||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacac 3025605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 21465544 - 21465477
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||| ||||| |||  ||||||||| || | |||||||||||||||||||||||||||    
T  21465544 agctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacac 21465477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 24413497 - 24413564
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||| |||||||||||||||| |||||| |  |||||||||||  |||||||||||||    
T  24413497 agctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacac 24413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 5813707 - 5813639
Alignment:
Q  280 gaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||| ||||| |||  |||||||||||| | |||| ||||||||||||||||||||||| |||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacact 5813639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 39820549 - 39820482
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc-gtgtccgacac 341  Q
    |||||||||||||| ||||||||||||||||||||||| | |||| ||||||| ||| |||||||||||    
T  39820549 agctatgaagcacggacacttctcggattaggcgtgtc-ccgtgtcggacacgcgtcggtgtccgacac 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| || |||| ||||||||| | ||||  |||||||||||||||||||||| ||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 11944795 - 11944737
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    ||||||||||||||||||  |||||||||||||||||| |||| ||| || ||||||||    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgt 11944737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 24858136 - 24858070
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| |||||| ||| ||||||||||||| | | || |||||| |||||||||||||||    
T  24858136 gctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacac 24858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 126295 - 126352
Alignment:
Q  284 cacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||| ||||| |||||||||| |||||| | || ||||||||||||||||||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacac 126352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 8343446 - 8343381
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||  |||||  |||||||||||||||| | |||| |||||||||||||||| |||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 16641909 - 16641974
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||  ||||| ||||||||||| ||||| | ||||| ||||| |||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 40332307 - 40332238
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||| |||| ||||| ||||||||||||| ||| | |||| ||||||||||||||||| ||||| |||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacact 40332238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 11927015 - 11927086
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| |||||  ||||||||||||||||||  ||||||| || ||||||||  |||||| ||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacac 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 18964310 - 18964251
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    ||||||||||||  ||||| ||||||| ||||||||||| ||||| |||| |||||||||    
T  18964310 gctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgt 18964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 22943302 - 22943349
Alignment:
Q  289 acacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtcc 336  Q
    ||||| ||||||||||||||||| | |||| |||||||||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 310
Target Start/End: Original strand, 24727684 - 24727715
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgt 310  Q
    ||||||||||||||||||||||||||||||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgt 24727715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 926730 - 926800
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||| ||||| ||||||| | || |||| | |||| |||||||||||| |||||||||| |||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacact 926800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 3951474 - 3951547
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| | ||| || |||||||||||||  | ||||  ||||||||||||||| |||||| ||||    
T  3951474 agctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 7472461 - 7472510
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacac 325  Q
    ||||||| |||  ||||||||||||||||||||||||||| || ||||||    
T  7472461 ctatgaaacacatacacttctcggattaggcgtgtctcagcgtcggacac 7472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 18407838 - 18407777
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccg 337  Q
    |||||||||||| ||||| |||  ||||||||||||  ||||| ||||| ||||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccg 18407777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 26902104 - 26902169
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| ||| ||| ||||||||| | |||   |||||||||||||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacac 26902169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 28745630 - 28745557
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| ||||| || | ||||| | |||||| |||  ||||| ||||||||||||||||| ||||    
T  28745630 agctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 29447040 - 29447105
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||| ||||| || ||||||||||||||   ||||  ||||| ||||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacacc 29447105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 31514974 - 31514938
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  31514974 gctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 26769641 - 26769579
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccga 338  Q
    |||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 35057000 - 35056927
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| ||||| ||| |||||||||||| || |||| ||||||||||||||||||||||| ||||    
T  35057000 agctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 27084390 - 27084322
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||||   ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  27084390 agctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacacc 27084322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 28596587 - 28596516
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||| ||||| ||||||||||| |||||  ||||| ||||||||||||||||||||||| |||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacact 28596516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 2438661 - 2438731
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||| ||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||| |||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacact 2438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 38117099 - 38117171
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||  ||||||||||||||||| | |||| |||||||||| |||||||||||| |||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacact 38117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 12224337 - 12224270
Alignment:
Q  281 aagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||| |||||| || |||||||||||||| |||||| |||||||| |||||||||||||| |||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacact 12224270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 37419873 - 37419802
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| |||||||  |||||||||||||| ||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 42511320 - 42511387
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||| ||||| |||||||||| |||||| | |||| |||||||||| |||||||||||    
T  42511320 agctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 30717457 - 30717523
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    |||||||||||||| ||||| || ||||||||||| || |||||| | |||||||||||||||||||    
T  30717457 agctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgaca 30717523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 34993922 - 34993987
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||||||||| || | |||||||||||| |||||| |||||| |||||||| ||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacac 34993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 18840953 - 18841025
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||||| ||||| | |||| ||||| |||||||||| |||||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacact 18841025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| || |||| ||||||||| | ||||  |||||||||||||||||||||| ||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 29176442 - 29176505
Alignment:
Q  285 acgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| |||||||| |||||||||||| ||||| ||| ||||||| ||||| |||||    
T  29176442 acgaacacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacact 29176505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 11223793 - 11223862
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctaca 346  Q
    |||||||||||| ||||| ||| ||||||||||||| | ||||  |||| |||||||||||||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctaca 11223862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 15972992 - 15972920
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||| |  |||||||||| ||||| | | || ||||||||||||||||||||||| |||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacact 15972920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 19980796 - 19980740
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtc 330  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||| ||||| |||||    
T  19980796 agctatgaagcatgaacacttctcggattaggtgtgtctcgatgtcggacatgtgtc 19980740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 37559096 - 37559024
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||| ||||||||| ||||||  | |||| |||||||||||  |||||||||| |||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacact 37559024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 10535685 - 10535720
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtc 311  Q
    |||||||||||||||||| |||||||||||||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtc 10535720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 21782744 - 21782815
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| | | |||||| |||||| | ||||||||||||||||||| | |||||| ||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacac 21782815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 28524543 - 28524485
Alignment:
Q  289 acacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||| |||||||||||| || ||||  ||||||||| |||||||||||| ||||    
T  28524543 acacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacac 28524485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Original strand, 29176368 - 29176402
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgt 310  Q
    |||||||||| ||||||||||||||||||||||||    
T  29176368 ctatgaagcatgaacacttctcggattaggcgtgt 29176402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 18420362 - 18420427
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||||||||||  |||||||||||||||||||||||  | ||| | |||| |||| |||||||||    
T  18420362 gctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgaca 18420427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 19580222 - 19580291
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||||||  |||||  |||||||||  |||| |  ||||||||||||||| ||||||||||||    
T  19580222 tagctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacacc 19580291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 30404789 - 30404862
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||| |||||| |||||||| ||||   |||| ||||| |||||||||||||| || |||||    
T  30404789 gctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacact 30404862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 41843565 - 41843500
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||  ||||| ||||||| | ||||||| | |||| |||||||||||| |||||||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 19942382 - 19942318
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||| | ||||| ||||||||||||||||| | ||||  ||||| || |||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacacc 19942318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 21576684 - 21576749
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  21576684 gctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgaca 21576749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 43565000 - 43564928
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||||||||||||||||||||||| | | || |||||| |||||||||||||||| |||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacact 43564928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 39698671 - 39698600
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| ||| || |||||||||||||||| ||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 31084447 - 31084382
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||| |||| ||||| |||||||||||| |||| |||||| ||||||||||||||||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 14873641 - 14873577
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||||||||||||| | ||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  279 tgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||| ||||| ||||||||||||||||| |||||| |||||| |||||||||| ||||| ||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||| ||||| |||||||||||||||||   ||||| |||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 21190998 - 21191068
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||| ||||| ||||||||||||||||| | | || |||||||||| |||||||||||| |||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacact 21191068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 30502330 - 30502399
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| | || ||||||||| |||| |||||| ||||| ||||||||||||||||| ||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 30542673 - 30542742
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| | || ||||||||| |||| |||||| ||||| ||||||||||||||||| ||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 2437032 - 2436980
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacg 326  Q
    |||||||||||||||||||| ||||||||||||||||||  |||| |||||||    
T  2437032 agctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacg 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 30183675 - 30183620
Alignment:
Q  280 gaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtc 335  Q
    |||||||  |||||||||| |||||||||||| |||||| ||||||||||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtc 30183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 11686068 - 11686002
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||| ||||| ||| |||||| |||| ||  || |||||||||||||||||||||||||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacacc 11686002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 16304366 - 16304428
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccga 338  Q
    |||||||||||| ||| | |||||||||| |||||||| |||| || ||||||||||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccga 16304428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 24238603 - 24238661
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtcc 336  Q
    |||||||||| ||||| || |||||| || |||| ||||||||||||||||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtcc 24238661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 27932354 - 27932288
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||| |||||| |||| ||||||||||||   ||||  ||||||||||||||||||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 21522882 - 21522809
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||| ||||| |||||  | |||||||||||||| | |||  ||||||||||||||||||||||| ||||    
T  21522882 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 21533448 - 21533375
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||| ||||| |||||  | |||||||||||||| | |||  ||||||||||||||||||||||| ||||    
T  21533448 agctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 3966632 - 3966568
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||| |||||||||| |||||| |  |||||||||| ||| |||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacac 3966568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 23015926 - 23015986
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccga 338  Q
    ||||||| || ||||| ||||||||||||||||| || ||| |||||| ||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccga 23015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 35017162 - 35017110
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtg 328  Q
    |||||||||||| ||||| ||||||||||||||||| |  |||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 17593660 - 17593715
Alignment:
Q  273 tagctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtg 328  Q
    ||||||||||| ||| ||||| ||||||||| ||||||| | ||||||||||||||    
T  17593660 tagctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 19579829 - 19579766
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||| |||| ||||| ||||||||||||||||| | ||||| ||||  |||||||||||||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacac 19579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 21814391 - 21814320
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||||| | || |||| ||||||||| | |||   |||||||||||||||||||||| ||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 30098982 - 30099049
Alignment:
Q  280 gaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||||| || |||| ||||||||| | ||||  |||||||||||| ||||||||| ||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 39809747 - 39809798
Alignment:
Q  156 tatggtctgatgataaaaatgaaaagaagctttatattgtcctcataaggta 207  Q
    ||||||||||||| ||||| |||||||| ||||||||| ||||| |||||||    
T  39809747 tatggtctgatgacaaaaaggaaaagaaactttatattatcctcttaaggta 39809798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 15382591 - 15382533
Alignment:
Q  289 acacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||| ||||||||||||||||| | |||| ||||| ||||||||||| ||||| ||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 17123166 - 17123101
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||| || |||||||| |||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtc-ccgtgtcggacatgtttcgtgtccaacacc 17123101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 21542159 - 21542089
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||| ||||| ||| | || ||||| |||||||| | |||| ||||||||||||||||||||||| ||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 41091184 - 41091250
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgaca 340  Q
    |||||||||||||||||||| ||| |||||| |||| ||  ||||| ||||| ||||| ||||||||    
T  41091184 agctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgaca 41091250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 30098456 - 30098391
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||| | ||||||||||| |||||   ||||  |||||||||||||||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 32630675 - 32630740
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||   ||||| |||| |||||| |||||||| ||| ||||||||||||| ||||||||    
T  32630675 ctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacac 32630740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 6401627 - 6401563
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    ||||||||||| ||||| || |||| |||||| || | ||||  |||||||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacac 6401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 7677836 - 7677764
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||||||||||  || || ||||||||||||||||| | |||| ||||| ||| |||||| |||||| ||||    
T  7677836 gctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 15410377 - 15410433
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgt 332  Q
    |||| ||||||||||||| ||||| |||| |||||| | ||||||||||| ||||||    
T  15410377 ctattaagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgt 15410433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 8917 - 8845
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| | ||| ||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacact 8845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 14646 - 14580
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    |||||||||||| ||||| ||  ||||||||||||||| |||| |||||||||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 403 - 474
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    ||||||||||| ||||| ||||||||||| ||||| | |||| ||||||| ||||||||||||||| |||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 3778 - 3849
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||| | ||||| |||||||||||||||||||  ||| ||||| ||||||||||||||||| ||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 70399 - 70325
Alignment:
Q  274 agctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||| |||||||||||||||  ||||||||||| ||||   |||| ||||||||||||||||||||||| |||||    
T  70399 agctttgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacact 70325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 8564 - 8635
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| ||||| |||| |||||||||||  |||||| |||||||| |||||||||| ||| ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 71855 - 71784
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||  ||||| |||||||||| |||||| | |||| |||||||||| |||||||||||| ||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 4821 - 4879
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||| ||||| ||||||||||||||||| | |||| ||||| |||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 8720 - 8662
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgt 334  Q
    |||||||||||| ||||| || ||||||||||| || |||||| |||||||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 23641 - 23575
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||| ||||||||| |||||| ||||||| |||| | |||||| | ||||||||||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacacc 23575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 3427 - 3362
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacac 341  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||    |||||||| ||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacac 3362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||||||||| ||||| |||||||||||||||||   ||||  |||| |||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 24155 - 24083
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttgg--acacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| |||||  |||||||||||||||| |||||| ||  |||||||| |||||||||||| ||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtc-cagtgtcggacacacgtgttgtgtccgacaccgacac 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 5926 - 5991
Alignment:
Q  277 tatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacc 342  Q
    ||||| ||||| ||||| || |||| ||||||||||| ||||  |||||||||||||| |||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacacc 5991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||| ||||| || |||||||| |||||  |||||  ||| |||||||||||||||||| ||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||| ||||| || |||||||| |||||  |||||  ||| |||||||||||||||||| ||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  278 atgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||| |||| ||||| ||||||||||||||||||  || | | |||||||||||||| |||||| ||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 16265 - 16193
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    |||||||||||| || |||  ||||||||| |||||| | |||||||| |||| | |||||||||||| ||||    
T  16265 gctatgaagcacaaatactaatcggattagacgtgtcccggtgttggatacgtattgtgtccgacaccaacac 16193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 21149 - 21113
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtct 312  Q
    |||||||||||| | ||||||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtct 21113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 21407 - 21371
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtct 312  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtct 21371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 3059 - 2999
Alignment:
Q  275 gctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtc 335  Q
    |||||| |||||| ||||| ||||||||||||||||  | |||| | ||||||||||||||    
T  3059 gctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtc 2999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 45470 - 45542
Alignment:
Q  276 ctatgaagcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacact 348  Q
    |||||||||||| ||| |  | ||||||||| |||| | ||||  |||||||||||||||||||||| |||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacact 45542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 53303 - 53239
Alignment:
Q  283 gcacgaacacttctcggattaggcgtgtctcagtgttggacacgtgtcgtgtccgacacctacac 347  Q
    ||||| |||||||| ||||||  |||||| | |||| ||||||||||| ||||||||||| ||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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