View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10553_low_25 (Length: 228)
Name: NF10553_low_25
Description: NF10553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10553_low_25 |
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Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 2328350 - 2328535
Alignment:
| Q |
1 |
acattttcaagtgggtatctaattggccaaaaattgttgatgcaatttctactatttgtagactaatggatgaaattgtgaccagtgaggtatttatata |
100 |
Q |
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| T |
2328350 |
acattttcaagtgggtatctaattggccaaaaattgttgatgcaatttctactatttgtagactaatggatgaaattgtgaccagtgaggtatttatata |
2328449 |
T |
|
| Q |
101 |
tcacatctatatctagatatatagaaaatttaagctttatttctctctaatgtaagttttttacacaatagaaattgttgcattga |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2328450 |
tcacatctatatctagatatatagaaaatttaagctttatttctctctaatgtaagttttttacacaatagaaattgttgcattga |
2328535 |
T |
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