View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10556_low_3 (Length: 347)

Name: NF10556_low_3
Description: NF10556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10556_low_3
NF10556_low_3
[»] chr2 (22 HSPs)
chr2 (19-337)||(1534646-1534964)
chr2 (26-102)||(37199604-37199680)
chr2 (27-102)||(31363887-31363962)
chr2 (26-80)||(28167555-28167609)
chr2 (24-78)||(38911335-38911388)
chr2 (29-102)||(34173721-34173794)
chr2 (27-72)||(38910698-38910743)
chr2 (26-101)||(6229889-6229964)
chr2 (21-72)||(13873985-13874036)
chr2 (21-72)||(14014110-14014161)
chr2 (26-80)||(3515477-3515531)
chr2 (39-101)||(12414307-12414369)
chr2 (39-101)||(12426367-12426429)
chr2 (26-80)||(43656923-43656977)
chr2 (26-103)||(4437983-4438060)
chr2 (21-82)||(8313669-8313730)
chr2 (26-103)||(33146027-33146104)
chr2 (29-101)||(1366420-1366492)
chr2 (43-79)||(6078024-6078060)
chr2 (27-103)||(11563789-11563865)
chr2 (26-78)||(22606987-22607039)
chr2 (27-103)||(34248068-34248144)
[»] chr1 (24 HSPs)
chr1 (24-104)||(36605403-36605483)
chr1 (26-80)||(19072363-19072417)
chr1 (26-80)||(19120253-19120307)
chr1 (26-72)||(29510483-29510529)
chr1 (26-102)||(16536365-16536441)
chr1 (43-103)||(33113105-33113165)
chr1 (27-102)||(36604720-36604795)
chr1 (27-102)||(41322201-41322276)
chr1 (26-104)||(17109297-17109374)
chr1 (26-80)||(19071727-19071781)
chr1 (26-80)||(19119617-19119671)
chr1 (26-80)||(45737320-45737374)
chr1 (27-72)||(1114888-1114933)
chr1 (21-78)||(1117037-1117094)
chr1 (27-80)||(4601709-4601762)
chr1 (27-68)||(18406557-18406598)
chr1 (27-104)||(25813013-25813090)
chr1 (39-104)||(33126176-33126241)
chr1 (29-102)||(42830531-42830604)
chr1 (27-80)||(44645276-44645329)
chr1 (27-103)||(25068317-25068393)
chr1 (26-102)||(41575167-41575243)
chr1 (27-103)||(45737992-45738068)
chr1 (27-79)||(51611816-51611868)
[»] chr7 (21 HSPs)
chr7 (21-101)||(38790067-38790147)
chr7 (29-101)||(2790075-2790147)
chr7 (27-102)||(8122621-8122696)
chr7 (26-101)||(40343753-40343828)
chr7 (26-101)||(48982543-48982618)
chr7 (27-101)||(32388153-32388227)
chr7 (26-80)||(46011124-46011178)
chr7 (26-103)||(11639889-11639966)
chr7 (26-103)||(40401556-40401633)
chr7 (27-80)||(42813584-42813637)
chr7 (27-102)||(2146880-2146955)
chr7 (27-102)||(19156081-19156156)
chr7 (27-102)||(20755480-20755555)
chr7 (21-80)||(27619633-27619692)
chr7 (26-103)||(27144174-27144251)
chr7 (27-104)||(38670689-38670766)
chr7 (52-101)||(38790771-38790820)
chr7 (27-79)||(5951668-5951720)
chr7 (27-103)||(6185338-6185414)
chr7 (27-103)||(6191854-6191930)
chr7 (27-103)||(25606917-25606993)
[»] chr5 (19 HSPs)
chr5 (26-103)||(19408532-19408609)
chr5 (27-101)||(8572694-8572768)
chr5 (29-103)||(27979224-27979298)
chr5 (27-101)||(31476970-31477044)
chr5 (27-106)||(36737454-36737533)
chr5 (26-101)||(37658079-37658154)
chr5 (27-102)||(42598993-42599068)
chr5 (26-80)||(1199749-1199803)
chr5 (26-80)||(1932026-1932080)
chr5 (26-68)||(20570156-20570198)
chr5 (26-104)||(27979904-27979982)
chr5 (26-79)||(8573353-8573406)
chr5 (27-80)||(13280152-13280205)
chr5 (26-103)||(22731064-22731141)
chr5 (19-68)||(27028638-27028687)
chr5 (27-103)||(4055414-4055490)
chr5 (26-78)||(6048003-6048055)
chr5 (27-103)||(14594062-14594138)
chr5 (27-103)||(17781051-17781126)
[»] chr3 (27 HSPs)
chr3 (26-103)||(11345363-11345440)
chr3 (25-80)||(16067898-16067953)
chr3 (26-80)||(45241219-45241273)
chr3 (27-104)||(1263064-1263141)
chr3 (26-103)||(18364625-18364702)
chr3 (27-80)||(30605351-30605404)
chr3 (26-102)||(18365285-18365361)
chr3 (27-103)||(33115239-33115315)
chr3 (26-102)||(37183074-37183150)
chr3 (29-101)||(40974033-40974105)
chr3 (27-102)||(44500048-44500123)
chr3 (26-101)||(54606428-54606503)
chr3 (26-80)||(1262415-1262469)
chr3 (26-104)||(3090422-3090500)
chr3 (26-80)||(30604693-30604747)
chr3 (29-103)||(47794659-47794733)
chr3 (21-78)||(27255305-27255362)
chr3 (27-80)||(54403577-54403630)
chr3 (26-102)||(10887706-10887782)
chr3 (27-103)||(27255979-27256055)
chr3 (39-79)||(33978575-33978615)
chr3 (26-102)||(40036400-40036476)
chr3 (26-102)||(40974702-40974778)
chr3 (42-102)||(44499356-44499416)
chr3 (26-102)||(49080613-49080689)
chr3 (29-77)||(49765136-49765184)
chr3 (26-82)||(54605778-54605834)
[»] chr8 (20 HSPs)
chr8 (29-80)||(17734919-17734970)
chr8 (26-104)||(3075300-3075378)
chr8 (26-102)||(11141066-11141142)
chr8 (27-102)||(25597769-25597844)
chr8 (29-80)||(37836937-37836988)
chr8 (27-102)||(40298915-40298990)
chr8 (26-72)||(8437923-8437969)
chr8 (26-68)||(8438572-8438614)
chr8 (26-80)||(36016764-36016818)
chr8 (27-80)||(14880194-14880247)
chr8 (26-79)||(17564687-17564740)
chr8 (26-103)||(22934284-22934361)
chr8 (29-78)||(37872290-37872339)
chr8 (27-80)||(43777001-43777054)
chr8 (26-102)||(8628056-8628132)
chr8 (27-103)||(11759383-11759459)
chr8 (29-101)||(14879517-14879589)
chr8 (26-78)||(25485431-25485483)
chr8 (27-103)||(32904225-32904301)
chr8 (52-104)||(41262790-41262842)
[»] chr4 (28 HSPs)
chr4 (27-102)||(615428-615503)
chr4 (26-81)||(50824643-50824698)
chr4 (26-72)||(4949958-4950004)
chr4 (26-103)||(16192320-16192397)
chr4 (26-103)||(35667761-35667838)
chr4 (46-102)||(7478666-7478722)
chr4 (26-78)||(26705674-26705726)
chr4 (21-80)||(754884-754943)
chr4 (26-80)||(616136-616190)
chr4 (27-69)||(13482805-13482847)
chr4 (26-104)||(55068835-55068913)
chr4 (28-102)||(56310073-56310147)
chr4 (21-102)||(721979-722060)
chr4 (27-104)||(6232413-6232490)
chr4 (26-103)||(8192995-8193072)
chr4 (27-68)||(21037326-21037367)
chr4 (27-80)||(23722057-23722110)
chr4 (27-68)||(29429705-29429746)
chr4 (26-71)||(33047234-33047279)
chr4 (25-110)||(37424450-37424535)
chr4 (27-80)||(38720625-38720678)
chr4 (26-102)||(7166083-7166159)
chr4 (27-103)||(13392757-13392833)
chr4 (27-103)||(13395896-13395972)
chr4 (26-102)||(16960199-16960275)
chr4 (27-103)||(23309484-23309560)
chr4 (26-78)||(35667288-35667340)
chr4 (39-103)||(37423136-37423200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-80)||(421163-421217)
[»] chr6 (16 HSPs)
chr6 (27-102)||(187763-187838)
chr6 (27-78)||(2092343-2092394)
chr6 (27-102)||(5443696-5443771)
chr6 (29-80)||(7448244-7448295)
chr6 (27-102)||(12025510-12025585)
chr6 (26-80)||(5916106-5916160)
chr6 (26-104)||(12026202-12026280)
chr6 (26-80)||(17307221-17307275)
chr6 (21-102)||(3767746-3767827)
chr6 (27-80)||(9240874-9240927)
chr6 (26-103)||(11522792-11522869)
chr6 (27-80)||(25528423-25528476)
chr6 (27-104)||(31882515-31882592)
chr6 (27-76)||(32130956-32131004)
chr6 (42-103)||(34709250-34709311)
chr6 (27-103)||(11523483-11523559)
[»] scaffold0368 (1 HSPs)
scaffold0368 (29-102)||(10587-10660)
[»] scaffold0340 (1 HSPs)
scaffold0340 (29-102)||(12867-12940)
[»] scaffold0105 (1 HSPs)
scaffold0105 (26-103)||(19651-19728)


Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 337
Target Start/End: Original strand, 1534646 - 1534964
Alignment:
Q  19 gagagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctatcaattaattaattt 118  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1534646 gagagatgagtgtatatatgaatataagagaggagaggagtgtaattcaaacatatttgaggagaggagattttaatttactctatcaattaattaattt 1534745  T
Q  119 agatgccggtatattggtacactcgaattcttgtaccgtaaaaattgttttgaaagatagtttaacaatgaaaatcctcatcttcactgggtgcagcgtg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1534746 agatgccggtatattggtacactcgaattcttgtaccgtaaaaattgttttgaaagatagtttaacaatgaaaatcctcatcttcactaggtgcagcgtg 1534845  T
Q  219 actattattcagtctcatgagaagtcaagaatcataatattagttgatgatttgaaaaagcctctagaatctttgtctctaacaatggaattgtttttct 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  1534846 actattattcagtctcatgagaagtcaagaatcataatattagttgatgatttgaaaaagcctctaaagtctttgtctctaacaatggaattttttttct 1534945  T
Q  319 ttcaaaaactatacctttg 337  Q
    |||||||||||||||||||    
T  1534946 ttcaaaaactatacctttg 1534964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 37199604 - 37199680
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||| ||||||| | || || | |||||||||||    
T  37199604 gagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactct 37199680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 31363962 - 31363887
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| ||||||| ||||||||||| ||| ||||||| | ||||| | |||||||||||    
T  31363962 agtgtatattttaacataagagggaaggggtgtgtaattcaagcatctttgaggggaggagagtataatttactct 31363887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 28167609 - 28167555
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| ||||||||||||||||||| ||| |||||||    
T  28167609 gagtgtatattttaacataagagggaaggggagtgtaattcaatcatctttgagg 28167555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 38911335 - 38911388
Alignment:
Q  24 atgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| |||||    
T  38911335 atgagtgtatattttaacataagag-gaaggggagtgtaattcaaacatctttga 38911388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 34173721 - 34173794
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||| | |||||||||| | ||||||||||||||||||||| ||||||| | || || | |||||||||||    
T  34173721 tgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactct 34173794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 38910743 - 38910698
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||    
T  38910743 agtgtatattttaacataagagaggaggggagtgtaattcaaacat 38910698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 6229889 - 6229964
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||| | |||||||||| |||||||||||||||||||  || ||||||| | || || | ||||||||||    
T  6229889 gagtgtatattttaacataagagggaaggggagtgtaattcaaggatctttgaggggaggggagtgtaatttactc 6229964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 13873985 - 13874036
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    ||||||||||||||| | |||||||||||| ||  |||||||||||||||||    
T  13873985 gagatgagtgtatattttaacataagagaggagaagagtgtaattcaaacat 13874036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 14014110 - 14014161
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    ||||||||||||||| | |||||||||||| ||  |||||||||||||||||    
T  14014110 gagatgagtgtatattttaacataagagaggagaagagtgtaattcaaacat 14014161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 3515477 - 3515531
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||||| ||||||||||||||| |||||||    
T  3515477 gagtgtatattttaacataagaggggaggggggtgtaattcaaacatctttgagg 3515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 12414307 - 12414369
Alignment:
Q  39 aacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||||| ||| || |||||||||||||| ||||||| | ||||| | ||||||||||    
T  12414307 aacataagagaggaggagaatgtaattcaaacatctttgaggggaggagaatgtaatttactc 12414369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 12426367 - 12426429
Alignment:
Q  39 aacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||||| ||| || |||||||||||||| ||||||| | ||||| | ||||||||||    
T  12426367 aacataagagaggaggagaatgtaattcaaacatctttgaggggaggagaatgtaatttactc 12426429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 43656977 - 43656923
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | ||| |||||  ||| |||||||||||||||||||||||||||    
T  43656977 gagtgtatattttaacttaagatggaatgggagtgtaattcaaacatatttgagg 43656923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 4437983 - 4438060
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | || |||||||||||||||||| ||||| | |||  || | ||||||||||||    
T  4437983 gagtgtatattttaacataagaggggagaggagtgtaattcaaacatctttgaagggtgtggagtgtaatttactcta 4438060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 8313730 - 8313669
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggag 82  Q
    |||| |||||||||| | |||||||||| | ||||||||||||||||| |||  ||||||||    
T  8313730 gagaggagtgtatattttaacataagaggggaggggagtgtaattcaagcatccttgaggag 8313669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 33146104 - 33146027
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||| ||||||| ||| ||||||| | || || | ||||||||||||    
T  33146104 gagtgtatattttaacataagaggggaggggagtgcaattcaagcatctttgaggggaggggagtgtaatttactcta 33146027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 1366420 - 1366492
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||| | |||||||||||| ||| ||||||||||||||||| ||| ||| | ||  ||| ||||||||||    
T  1366420 tgtatattttaacataagagaggaggagagtgtaattcaaacatctttaaggggagggaattgtaatttactc 1366492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 6078024 - 6078060
Alignment:
Q  43 taagagagaaggggagtgtaattcaaacatatttgag 79  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  6078024 taagagggaaggggagtgtaattcaaacatctttgag 6078060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 11563865 - 11563789
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | | | ||||||||||||| ||| ||||||| | ||||| | ||||||||||||    
T  11563865 agtgtatattttaacataagaggggatgagagtgtaattcaagcatctttgaggggaggagagtgtaatttactcta 11563789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 22606987 - 22607039
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||| | |||||||||||  ||||||||||||||||| ||| |||||    
T  22606987 gagtgtatattttaacataagagaagaggggagtgtaattcaagcatctttga 22607039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 34248068 - 34248144
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  34248068 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 34248144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 36605403 - 36605483
Alignment:
Q  24 atgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||||| | |||||||||| | ||||||||||||||||||||| ||||||| | ||||| | |||||||||||||    
T  36605403 atgagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggagagtgtaatttactctat 36605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 19072363 - 19072417
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | || ||||||||| ||||||||||||||||||||| |||||||    
T  19072363 gagtgtatattttaatataagagaggaggggagtgtaattcaaacatctttgagg 19072417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 19120253 - 19120307
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | || ||||||||| ||||||||||||||||||||| |||||||    
T  19120253 gagtgtatattttaatataagagaggaggggagtgtaattcaaacatctttgagg 19120307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 29510483 - 29510529
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||    
T  29510483 gagtgtatattttaacataagagggaaggggagtgtaattcaaacat 29510529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 16536441 - 16536365
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  16536441 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 16536365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 33113165 - 33113105
Alignment:
Q  43 taagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||| | ||||||||||||||||||||| ||||||| |||| || | ||||||||||||    
T  33113165 taagaggggaggggagtgtaattcaaacatttttgaggggtggggagtgtaatttactcta 33113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 36604795 - 36604720
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| |||| |||||||||||||| ||| ||||||| | || || | |||||||||||    
T  36604795 agtgtatattttaacataagagggaagaggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 36604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 41322201 - 41322276
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | ||||| | |||||||||||    
T  41322201 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactct 41322276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 17109374 - 17109297
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | ||||||||||||| | ||||||||||||||| || ||||||| | || || | |||||||||||||    
T  17109374 gagtgtatattttaacataagagaga-gaggagtgtaattcaaatatctttgaggggaggggagtgtaatttactctat 17109297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 19071781 - 19071727
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||| ||||||||||||||||| |||||||    
T  19071781 gagtgtatattttaacataagaggggaggagagtgtaattcaaacatctttgagg 19071727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 19119671 - 19119617
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||| ||||||||||||||||| |||||||    
T  19119671 gagtgtatattttaacataagaggggaggagagtgtaattcaaacatctttgagg 19119617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 45737374 - 45737320
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  45737374 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 45737320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 1114888 - 1114933
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  1114888 agtgtatattttaacataagaggggaggggagtgtaattcaaacat 1114933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 1117037 - 1117094
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||| |||| ||||| | |||||||||||| |||||||||||||| |||||| |||||    
T  1117037 gagaagagtttatatttaaacataagagaggaggggagtgtaatttaaacatctttga 1117094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 4601709 - 4601762
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| ||||| ||||||||||||| ||| |||||||    
T  4601709 agtgtatattttaacataagagggaaggagagtgtaattcaagcatctttgagg 4601762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 18406598 - 18406557
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    ||||||||| | |||||||||||| |||||||||||||||||    
T  18406598 agtgtatattttaacataagagaggaggggagtgtaattcaa 18406557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 25813090 - 25813013
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||||    
T  25813090 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggcgagtgtaatttactctat 25813013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 33126241 - 33126176
Alignment:
Q  39 aacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||||  |||||| |||||||||||||| ||||||||| || |  | |||||||||||||    
T  33126241 aacataagagaagaggggaatgtaattcaaacatctttgaggagaggggggtgtaatttactctat 33126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 42830604 - 42830531
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||| | |||||||||| |  |||||||||||||||||||| ||||||| | ||||| | ||||| |||||    
T  42830604 tgtatattttaacataagaggggcggggagtgtaattcaaacatctttgaggggaggagagtgtaattcactct 42830531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 44645329 - 44645276
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||||| | | ||||||||||||||||| |||||||    
T  44645329 agtgtatattttaacataagagaggatgagagtgtaattcaaacatctttgagg 44645276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 25068393 - 25068317
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||| ||||||||||||| ||| ||||||| |||| || | ||||||||||||    
T  25068393 agtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggtggggagtgtaatttactcta 25068317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 41575243 - 41575167
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||| |||| | |||||||||| |||| |||||||||||||| ||| ||||||| | || || | |||||||||||    
T  41575243 gagtgcatattttaacataagagggaagaggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 41575167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 45738068 - 45737992
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | ||| ||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  45738068 agtgtatattttaacataagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 45737992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 51611868 - 51611816
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgag 79  Q
    ||||||||| | |||||||||| |||| | |||||||||||||||| ||||||    
T  51611868 agtgtatattttaacataagagggaagagaagtgtaattcaaacatctttgag 51611816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 38790147 - 38790067
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || |||| ||||||||||    
T  38790147 gagatgagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggattgtaatttactc 38790067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 2790147 - 2790075
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||| | ||| |||||| | ||||||||||||||||||||| ||||||||| ||||| | ||||||||||    
T  2790147 tgtatattttaacttaagaggggaggggagtgtaattcaaacatctttgaggagaggagagtgtaatttactc 2790075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 8122696 - 8122621
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  8122696 agtgtatattttaacataagagataaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 8122621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 40343828 - 40343753
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||| | ||| |||||| ||||||||||||||||||| ||| ||||||| | ||||| | ||||||||||    
T  40343828 gagtgtatattttaacttaagagggaaggggagtgtaattcaagcatctttgaggggaggagagtataatttactc 40343753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 48982543 - 48982618
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||| | |||||||||| | |||| |||||||||||| ||||||||||||| || || | ||||||||||    
T  48982543 gagtgtatattttaacataagaggggagggaagtgtaattcaagcatatttgaggagaggggagtataatttactc 48982618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 32388153 - 32388227
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||||| | |||||||||| | || |||||||||||||| ||| ||||||||| ||||| | ||||||||||    
T  32388153 agtgtatattttaacataagaggggagtggagtgtaattcaagcatctttgaggagaggagaatgtaatttactc 32388227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 46011124 - 46011178
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||| |||| | |||||||||||||||||||||||||||||| ||| |||||||    
T  46011124 gagtgcatattttaacataagagagaaggggagtgtaattcaagcatctttgagg 46011178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 11639966 - 11639889
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  11639966 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 11639889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 40401556 - 40401633
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||| | | ||||| | ||||||||||||    
T  40401556 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaagggaggagagtgtaatttactcta 40401633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 42813584 - 42813637
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||||| ||||||||||||||||| ||| |||||||    
T  42813584 agtgtatattttaacataagagaggaggggagtgtaattcaagcatctttgagg 42813637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 2146880 - 2146955
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| ||||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  2146880 agtgtatattttaacttaagagggaaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 2146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 19156081 - 19156156
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| | ||  ||||||||||||||||| ||||||||| ||||| | || ||||||||    
T  19156081 agtgtatattttaacataagaggggagatgagtgtaattcaaacatctttgaggagaggagagtgtagtttactct 19156156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 20755480 - 20755555
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| | ||  ||||||||||||||||| ||||||||| ||||| | || ||||||||    
T  20755480 agtgtatattttaacataagaggggagatgagtgtaattcaaacatctttgaggagaggagagtgtagtttactct 20755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 27619633 - 27619692
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||| |||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  27619633 gagaggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 27619692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 27144251 - 27144174
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | |||||||||||||| || ||| ||||||| | || || | ||||||||||||    
T  27144251 gagtgtatattttaacataagaggggaggggagtgtaatttaagcatctttgaggggaggggagtgtaatttactcta 27144174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 38670689 - 38670766
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||||| || || | ||| |||||||||    
T  38670689 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggagaggggagtgtaacttactctat 38670766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 38790771 - 38790820
Alignment:
Q  52 aggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||||||||||||||||| ||||||| | ||||| | ||||||||||    
T  38790771 aggggagtgtaattcaaacatctttgaggggaggagaatgtaatttactc 38790820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 5951720 - 5951668
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgag 79  Q
    ||||||||| | |||||||||||| |||| |||| ||||||||||| ||||||    
T  5951720 agtgtatattttaacataagagaggagggtagtgaaattcaaacatctttgag 5951668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 6185338 - 6185414
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  6185338 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 6185414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 6191854 - 6191930
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  6191854 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 6191930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 25606993 - 25606917
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  25606993 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 25606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 19408609 - 19408532
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | ||||| | ||||||||||||    
T  19408609 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactcta 19408532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 8572768 - 8572694
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||||| | |||||||||||  ||||||||||||||||| ||| ||||||| | ||||| | ||||||||||    
T  8572768 agtgtatattttaacataagagatgaggggagtgtaattcaagcatttttgaggggaggagagtgtaatttactc 8572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 27979298 - 27979224
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | ||||||  ||||||||||||    
T  27979298 tgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggagatggtaatttactcta 27979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 31476970 - 31477044
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||||| || || | ||||||||||    
T  31476970 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggagaggggagtgtaatttactc 31477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 36737454 - 36737533
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctatca 106  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| ||| ||| | || || | |||||||||||||||    
T  36737454 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttaaggggaggggagtgtaatttactctatca 36737533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 37658079 - 37658154
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||||||||||| | || || | ||||||||||    
T  37658079 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatatttgaggggaggggaatataatttactc 37658154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 42598993 - 42599068
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| | ||| ||||||||||||||||  ||||||| | || |||| |||||||||||    
T  42598993 agtgtatattttaacataagagtggaggagagtgtaattcaaacagttttgaggggaggggattgtaatttactct 42599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 1199749 - 1199803
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | ||| |||||| ||||||||||||||||||| ||| |||||||    
T  1199749 gagtgtatattttaacttaagagggaaggggagtgtaattcaagcatctttgagg 1199803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 1932026 - 1932080
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||| ||||| | |||||||||||| |||||||| |||||||||||| |||||||    
T  1932026 gagtatatattttaacataagagaggaggggagtataattcaaacatctttgagg 1932080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 20570198 - 20570156
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    |||||||||| | |||||||||||| |||||||||||||||||    
T  20570198 gagtgtatattttaacataagagaggaggggagtgtaattcaa 20570156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 27979904 - 27979982
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | |||||||||||  ||| | ||||||||||||||| ||||||| | || || | |||||||||||||    
T  27979904 gagtgtatattttaacataagagatgaggagggtgtaattcaaacatctttgaggggaggggagtgtaatttactctat 27979982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 8573353 - 8573406
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgag 79  Q
    |||||||||| | |||||||||| ||||| ||||||||||||| ||| ||||||    
T  8573353 gagtgtatattttaacataagagggaaggagagtgtaattcaagcatctttgag 8573406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 13280152 - 13280205
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| | |||| |||||||||||||||| |||||||    
T  13280152 agtgtatattttaacataagaggggagggcagtgtaattcaaacatctttgagg 13280205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 22731064 - 22731141
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||  | |||||||||||||||||| || ||||||| | || || | ||||||||||||    
T  22731064 gagtgtatattttaacataagaagggaggggagtgtaattcaaatatttttgaggggaggggagtataatttactcta 22731141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 27028638 - 27028687
Alignment:
Q  19 gagagatgagtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    |||||| |||| ||||| | |||||||||||| |||||||||||||||||    
T  27028638 gagagaggagtatatattttaacataagagaggaggggagtgtaattcaa 27028687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 4055414 - 4055490
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||| ||||||||||||| ||| ||||||| |||| || | ||||||||||||    
T  4055414 agtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggtggggagtgtaatttactcta 4055490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 6048055 - 6048003
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||| | |||||||||| | |||| |||||||||||||||| |||||    
T  6048055 gagtgtatattttaacataagaggggagggaagtgtaattcaaacatctttga 6048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 14594138 - 14594062
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | ||  || |||||||||||||| ||||||| | ||||| | ||||||||||||    
T  14594138 agtgtatattttaacataagaggggagatgattgtaattcaaacatctttgaggggaggagagtgtaatttactcta 14594062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 17781051 - 17781126
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | |||| |||||||||||| ||| ||||||| | ||||| | ||||||||||||    
T  17781051 agtgtatattttaacataagaggggaggg-agtgtaattcaagcatctttgaggggaggagagtgtaatttactcta 17781126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 11345363 - 11345440
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || ||||||||||||||    
T  11345363 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtttaatttactcta 11345440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 16067898 - 16067953
Alignment:
Q  25 tgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||||| | |||||||||||||| ||||||||||||||| ||| |||||||    
T  16067898 tgagtgtatattttaacataagagagaatgggagtgtaattcaagcatctttgagg 16067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 45241273 - 45241219
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||||| ||||||||||||||||| ||| |||||||    
T  45241273 gagtgtatattttaacataagagaggaggggagtgtaattcaagcatctttgagg 45241219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 1263064 - 1263141
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||||    
T  1263064 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggaatgtaatttactctat 1263141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 18364702 - 18364625
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  18364702 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 18364625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 30605351 - 30605404
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| | ||||||||||||||||||||| |||||||    
T  30605351 agtgtatattttaacataagagtggaggggagtgtaattcaaacatctttgagg 30605404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 18365285 - 18365361
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  18365285 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 18365361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 33115239 - 33115315
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | |||| |||||||||||| ||| |||||| || ||||| | ||||||||||||    
T  33115239 agtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgagaagaggagagtgtaatttactcta 33115315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 37183150 - 37183074
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | ||| |||||| | ||||||||||||||||||||| ||||||| | || || | |||||||||||    
T  37183150 gagtgtatattttaacttaagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactct 37183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 40974105 - 40974033
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||| | |||||||||| | ||||||||||||||||||||| || |||| | ||||| | ||||||||||    
T  40974105 tgtatattttaacataagaggggaggggagtgtaattcaaacatcttagaggggaggagagtgtaatttactc 40974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 44500048 - 44500123
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||   ||||| | |||||||||||    
T  44500048 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagggaaggagagtgtaatttactct 44500123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 54606428 - 54606503
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    |||||||||| | ||||||||||   ||||||||||||||||||||| ||| ||| | ||||| | ||||||||||    
T  54606428 gagtgtatattttaacataagaggagaggggagtgtaattcaaacattttttaggggaggagagtgtaatttactc 54606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 1262469 - 1262415
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  1262469 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 1262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 3090422 - 3090500
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | |||||||||| | ||||||||| ||||||| ||| ||||||| | || || | |||||||||||||    
T  3090422 gagtgtatattttaacataagaggggaggggagtgcaattcaagcatctttgaggggaggggagtgtaatttactctat 3090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 30604747 - 30604693
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | ||||||||||||||||||| ||||||| || ||| |||||||    
T  30604747 gagtgtatattttaacataagagagaaggggaatgtaatttaatcatctttgagg 30604693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 47794659 - 47794733
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||| | ||||||||||   ||||||||||||||||||||| ||| ||| | ||||| | ||||||||||||    
T  47794659 tgtatattttaacataagaggagaggggagtgtaattcaaacatctttaaggggaggagagtgtaatttactcta 47794733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 27255362 - 27255305
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    ||||||||||||||| | |||||||||| | ||| ||||||||||||| ||| |||||    
T  27255362 gagatgagtgtatattttaacataagaggggaggagagtgtaattcaagcatctttga 27255305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 54403630 - 54403577
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  54403630 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 54403577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 10887782 - 10887706
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  10887782 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 10887706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 27255979 - 27256055
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | || ||||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  27255979 agtgtatattttaatataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 27256055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 33978615 - 33978575
Alignment:
Q  39 aacataagagagaaggggagtgtaattcaaacatatttgag 79  Q
    |||||||||| |||  |||||||||||||||||||||||||    
T  33978615 aacataagagggaaatggagtgtaattcaaacatatttgag 33978575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 40036400 - 40036476
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | |||||| |||||||||| ||| |||||||   ||||| | |||||||||||    
T  40036400 gagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgagggtaggagagtgtaatttactct 40036476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 40974702 - 40974778
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | | || |||||||||||||||| ||| ||| | || || |||||||||||||    
T  40974702 gagtgtatattttaacataagaggggacggaagtgtaattcaaacatctttcaggggaggggaatttaatttactct 40974778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 44499416 - 44499356
Alignment:
Q  42 ataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||| | |||| |||||||||||||||| ||||||| ||| ||| | |||||||||||    
T  44499416 ataagaggggagggaagtgtaattcaaacatctttgaggggtgaagagtataatttactct 44499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 49080613 - 49080689
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | |||||| |||||||||| ||| ||||||  | ||||| | |||||||||||    
T  49080613 gagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgagaggaggagagtgtaatttactct 49080689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 49765136 - 49765184
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttg 77  Q
    ||||||| | |||||||||| | ||||||||||||||||||||| ||||    
T  49765136 tgtatattttaacataagaggggaggggagtgtaattcaaacatctttg 49765184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 54605834 - 54605778
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggag 82  Q
    |||||||||| | |||||||||| | ||||||||||||||||| |||  ||||||||    
T  54605834 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatcattgaggag 54605778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 17734919 - 17734970
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||||||||||    
T  17734919 tgtatattttaacataagagggaagaggagtgtaattcaaacatatttgagg 17734970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 3075378 - 3075300
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| | || || | |||||||||||||    
T  3075378 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactctat 3075300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 11141066 - 11141142
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||||| |||||| |||||||||| ||| ||||||| | || || | |||||||||||    
T  11141066 gagtgtatattttaacataagagaggaggggaatgtaattcaagcatctttgaggggaggggagtgtaatttactct 11141142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 25597844 - 25597769
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||||| ||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  25597844 agtgtatattttaacttaagagaggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 25597769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 37836988 - 37836937
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||| | ||||||| |||||||||||||||||||||| ||| |||||||    
T  37836988 tgtatattttaacataatagagaaggggagtgtaattcaagcatctttgagg 37836937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 40298990 - 40298915
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | |||||||||  ||||||||||||||||||| ||| ||||| ||| ||| | | |||||||||||    
T  40298990 agtgtatattttaacataagaatgaaggggagtgtaattcaagcatctttgacgagaggaaaatataatttactct 40298915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 8437969 - 8437923
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    |||||||||| | |||||||||||| || ||||||||||||||||||    
T  8437969 gagtgtatattttaacataagagaggagtggagtgtaattcaaacat 8437923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 8438572 - 8438614
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    |||||||||| | ||||||||||||||| ||||||||||||||    
T  8438572 gagtgtatattttaacataagagagaagtggagtgtaattcaa 8438614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 36016764 - 36016818
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||||| |||||| |||||||||| ||| |||||||    
T  36016764 gagtgtatattttaacataagagaggaggggattgtaattcaagcatctttgagg 36016818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 14880194 - 14880247
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  14880194 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 14880247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 17564740 - 17564687
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgag 79  Q
    |||||||||| | |||||||||| | |||| |||||||||||||||| ||||||    
T  17564740 gagtgtatattttaacataagaggggagggaagtgtaattcaaacatctttgag 17564687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 22934361 - 22934284
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  22934361 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 22934284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 37872339 - 37872290
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    ||||||| | |||||||||||| |||||||||||||| |||||| |||||    
T  37872339 tgtatattttaacataagagaggaggggagtgtaatttaaacatctttga 37872290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 43777001 - 43777054
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| |||| |||||||||||||| ||| |||||||    
T  43777001 agtgtatatttaaacataagagggaagtggagtgtaattcaagcatctttgagg 43777054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 8628056 - 8628132
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||||||||   |||||||||||| ||| ||||| | | ||||| | |||||||||||    
T  8628056 gagtgtatattttaacataagagagaagaaaagtgtaattcaagcatctttgaagggaggagagtgtaatttactct 8628132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 11759459 - 11759383
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||| | | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  11759459 agtgtatattttaacataagtggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 11759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 14879589 - 14879517
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactc 101  Q
    ||||||| | |||||||||| | ||| ||||||||||||||||| ||||||| | || || | ||||||||||    
T  14879589 tgtatattttaacataagaggggaggagagtgtaattcaaacatctttgaggggaggggagtgtaatttactc 14879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25485431 - 25485483
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||| | ||| |||||| | ||||||||||||||||||||| |||||    
T  25485431 gagtgtatattttaacttaagaggggaggggagtgtaattcaaacatctttga 25485483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 32904225 - 32904301
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| ||||| | |  |||| | ||||||||||||    
T  32904225 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaagggatgagagtgtaatttactcta 32904301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 41262790 - 41262842
Alignment:
Q  52 aggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||||||||||| ||||||||||||| ||  | | |||||||||||||    
T  41262790 aggggagtgtaattcaagcatatttgaggagagggaagtataatttactctat 41262842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 615503 - 615428
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| ||||||||||||||||||| ||| ||||||| | ||||| | |||||||||||    
T  615503 agtgtatattttaacttaagagtgaaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactct 615428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 50824698 - 50824643
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagga 81  Q
    |||||||||| | ||||||||||||||| |||||||||||||| ||| ||||||||    
T  50824698 gagtgtatattttaacataagagagaagtggagtgtaattcaagcatctttgagga 50824643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 4950004 - 4949958
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacat 72  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||    
T  4950004 gagtgtatattttaacataagagaggaggggagtgtaattcaaacat 4949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 16192320 - 16192397
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||||| ||||||||||||||||| ||| ||| || || || || | ||||||||||||    
T  16192320 gagtgtatattttaacataagagaggaggggagtgtaattcaagcatctttcagtagaggggagtgtaatttactcta 16192397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 35667761 - 35667838
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||| ||||  | | ||||||||||||    
T  35667761 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggtgggaagtgtaatttactcta 35667838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 7478722 - 7478666
Alignment:
Q  46 gagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||| || |||||||||||||||||| ||||||||| ||||| | |||||||||||    
T  7478722 gagaggagaggagtgtaattcaaacatctttgaggagaggagaatgtaatttactct 7478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 26705674 - 26705726
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||| | |||||||||||| ||||||||||||||||| ||| |||||    
T  26705674 gagtgtatattttaacataagagaggaggggagtgtaattcaagcatctttga 26705726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 754943 - 754884
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||||||||| | |||||||||| | || |||||||||||||| ||| |||||||    
T  754943 gagatgagtgtatattttaacataagaggggagaggagtgtaattcaagcatctttgagg 754884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 616136 - 616190
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | ||| |||||||| ||||||||||||||||| ||| |||||||    
T  616136 gagtgtatattttaacttaagagaggaggggagtgtaattcaagcatctttgagg 616190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 13482805 - 13482847
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaa 69  Q
    ||||||||| | |||||||||||| ||||||||||||||||||    
T  13482805 agtgtatatttaaacataagagaggaggggagtgtaattcaaa 13482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 55068913 - 55068835
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||  | || || | |||||||||||||    
T  55068913 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagaggaggggagtgtaatttactctat 55068835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 56310073 - 56310147
Alignment:
Q  28 gtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||| | |||||||||||| ||| ||||||||||||| ||| ||||||||| |  || | |||||||||||    
T  56310073 gtgtatattttaacataagagaggaggagagtgtaattcaagcatctttgaggagagatgagtgtaatttactct 56310147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 721979 - 722060
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||||||||| | |||||||||| | || ||||||||||||||  || ||||||| | || || | |||||||||||    
T  721979 gagatgagtgtatattttaacataagaggggagaggagtgtaattcaagtatctttgaggggaggggagtgtaatttactct 722060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 6232490 - 6232413
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||| | ||| ||||||   ||||||||||||||||| ||| ||||||| | ||||| | |||||||||||||    
T  6232490 agtgtatattttaacttaagaggagaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactctat 6232413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 8192995 - 8193072
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  8192995 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 8193072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 21037367 - 21037326
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    ||||||||| | |||||||||||| |||||||||||||||||    
T  21037367 agtgtatattttaacataagagaggaggggagtgtaattcaa 21037326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 23722057 - 23722110
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||| | ||||||||||||||||| ||| |||||||    
T  23722057 agtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagg 23722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 29429705 - 29429746
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaa 68  Q
    ||||||||| | |||||||||||||||| |||||||||||||    
T  29429705 agtgtatattttaacataagagagaaggagagtgtaattcaa 29429746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 33047234 - 33047279
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaaca 71  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||    
T  33047234 gagtgtatattttaacataagaggggaggggagtgtaattcaaaca 33047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 37424450 - 37424535
Alignment:
Q  25 tgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga--ggagtggagattttaatttactctatcaatta 110  Q
    ||||||||||| | |||||||||| | |||||| |||||||||| ||| |||||  |||||||||  | ||||||||||||| |||||    
T  37424450 tgagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgaatggagtggag--tataatttactctattaatta 37424535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 38720625 - 38720678
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | |||||||||||| | | ||||||||||||||||| |||||||    
T  38720625 agtgtatattttaacataagagaggatgagagtgtaattcaaacatctttgagg 38720678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 7166083 - 7166159
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | ||| |||||||| |||| |||||||||||| ||| ||||||| | || || | |||||||||||    
T  7166083 gagtgtatattttaacttaagagaggagggaagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 7166159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 13392757 - 13392833
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  13392757 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 13392833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 13395896 - 13395972
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  13395896 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 13395972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 16960275 - 16960199
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||||||||| | |||||||||| | |||| |||||||||||| ||| ||||| ||| || || | |||||||||||    
T  16960275 gagtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgaagagaggggagtgtaatttactct 16960199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 23309484 - 23309560
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| |||||||  ||| || | ||||||||||||    
T  23309484 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggtttggggagtgtaatttactcta 23309560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 35667288 - 35667340
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| |||||    
T  35667288 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttga 35667340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 37423200 - 37423136
Alignment:
Q  39 aacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||  | ||||||||||||||||| ||| ||||||| | ||||| | ||||||||||||    
T  37423200 aacataagaatggaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactcta 37423136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 421217 - 421163
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||| |||||||    
T  421217 gagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgagg 421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 187838 - 187763
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| ||||| ||||||||||||| ||| ||||||| | ||||| | |||||||||||    
T  187838 agtgtatattttaacttaagagggaaggtgagtgtaattcaagcatctttgaggggaggagaatgtaatttactct 187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 2092343 - 2092394
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttga 78  Q
    ||||||||| | || ||||||| | |||||||||||||||||||||||||||    
T  2092343 agtgtatattttaatataagaggggaggggagtgtaattcaaacatatttga 2092394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 5443696 - 5443771
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| ||||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  5443696 agtgtatattttaacttaagagggaaggggagtgtaattcaagcatctttgaggggaggggagtataatttactct 5443771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 7448295 - 7448244
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||| | |||||||||||||||| ||||||||||||| ||| |||||||    
T  7448295 tgtatattttaacataagagagaaggagagtgtaattcaagcatctttgagg 7448244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 12025585 - 12025510
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||||| | ||| |||||| ||||||||||||||||||| ||| ||||||| | || || | |||||||||||    
T  12025585 agtgtatattttaacttaagagggaaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 12025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 5916160 - 5916106
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| ||||||||||||||||| ||| | |||||||    
T  5916160 gagtgtatattttaacataagagggaaggggagtgtaattcgaacttctttgagg 5916106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 12026202 - 12026280
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||| ||||||  | || || | |||||||||||||    
T  12026202 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagaggaggggagtgtaatttactctat 12026280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 17307275 - 17307221
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    |||||||||| | |||||||||| |||| ||||||||||| |||||| |||||||    
T  17307275 gagtgtatattttaacataagagggaagaggagtgtaatttaaacatctttgagg 17307221  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 3767746 - 3767827
Alignment:
Q  21 gagatgagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    |||| |||||||||| | ||| |||||| | ||  ||||||||||||||||| ||||||| | ||||| | |||||||||||    
T  3767746 gagaggagtgtatattttaacttaagaggggagatgagtgtaattcaaacatctttgaggggaggagagtataatttactct 3767827  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 9240927 - 9240874
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | ||| |||||| | ||||||||||||||||||||| |||||||    
T  9240927 agtgtatattttaacttaagaggggaggggagtgtaattcaaacatctttgagg 9240874  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 11522869 - 11522792
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  11522869 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 11522792  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 25528423 - 25528476
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgagg 80  Q
    ||||||||| | ||| |||||||| ||||||||||||||||| ||| |||||||    
T  25528423 agtgtatattttaacttaagagaggaggggagtgtaattcaagcatctttgagg 25528476  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 31882515 - 31882592
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactctat 104  Q
    ||||||||| |||||| ||||| | ||  ||||||||||||||||| ||||||| | ||||| | |||||| ||||||    
T  31882515 agtgtatatttgaacacaagaggggagatgagtgtaattcaaacatctttgaggggaggagagtgtaattttctctat 31882592  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 32131004 - 32130956
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatattt 76  Q
    ||||||||| | |||||||||| || ||||||||||||||||||||||||    
T  32131004 agtgtatattttaacataagaggga-ggggagtgtaattcaaacatattt 32130956  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 34709311 - 34709250
Alignment:
Q  42 ataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||| | ||||||||||||||||| ||| ||||||| | || |||| ||||||||||||    
T  34709311 ataagaggggaggggagtgtaattcaagcatctttgaggggaggggattgtaatttactcta 34709250  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 11523483 - 11523559
Alignment:
Q  27 agtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    ||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  11523483 agtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 11523559  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 10660 - 10587
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||| | |||||||||| |  |||||||||||||||||||| ||||||| | ||||| | ||||| |||||    
T  10660 tgtatattttaacataagaggggcggggagtgtaattcaaacatctttgaggggaggagagtgtaattcactct 10587  T

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Target: scaffold0340 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 12867 - 12940
Alignment:
Q  29 tgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactct 102  Q
    ||||||| | |||||||||||| | | ||||||||||||||||| ||||||| | || || | |||||||||||    
T  12867 tgtatattttaacataagagaggaagagagtgtaattcaaacatctttgaggggaggggagtgtaatttactct 12940  T

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Target: scaffold0105 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 19651 - 19728
Alignment:
Q  26 gagtgtatatatgaacataagagagaaggggagtgtaattcaaacatatttgaggagtggagattttaatttactcta 103  Q
    |||||||||| | ||| |||||| | ||||||||||||||||| ||| ||||||| | || || | ||||||||||||    
T  19651 gagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcta 19728  T

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