View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_high_15 (Length: 251)
Name: NF10559_high_15
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 32531652 - 32531417
Alignment:
| Q |
8 |
aaaaacactcaaacaaagaaatcaacacatgttctcctatttcacacatgacaaggatttatactccttttcatactaagaactctacatgtgaagattt |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32531652 |
aaaaacactcaaacaaagaaatcaacacatgttctcctatttcacacatgacaaggatttatagtccttttcatactaagaactctacatgtgaagattt |
32531553 |
T |
|
| Q |
108 |
aggaatatatatcacttataaaataaaaaattaaagatgaatattcaagtttcatagcttcaaattgagatcaagagtatctcccacttcatgaccattc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32531552 |
aggaatatatatcacttataaaataaaaaattaaagatgaatattcaagtttcatagcttcaaattgagatcaagagtatctcccatttcatgaccattc |
32531453 |
T |
|
| Q |
208 |
tgatttctggatgtttgtccattttgtgtctctgct |
243 |
Q |
| |
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||| |||||||||||||||||||||||||||||||| |
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| T |
32531452 |
tgagttctggatgtttgtccattttgtgtctctgct |
32531417 |
T |
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