View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_high_5 (Length: 341)
Name: NF10559_high_5
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 7 - 329
Target Start/End: Original strand, 23917236 - 23917558
Alignment:
| Q |
7 |
ggttgcgagaagaaagtgagttccagaagcaatgaaaccaagataaagatggatcagtggaaggactcaggtactgatgttgaccaaaaacattctcata |
106 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
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| T |
23917236 |
ggttccgagaagaaagtgagttccagaagcaatgaaaccaagttaaggatggatcagtggaaggactcaggtactgatgttgatcaaaaaaattctcata |
23917335 |
T |
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| Q |
107 |
gcattccaagagacattgttttgcttcgtccacggaaatttctacagtcgaatttcgaagactattttccactttctcaatcaatagcttcatctgatga |
206 |
Q |
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| T |
23917336 |
gtattccaagagacattgttttgcttcgtccacggaaatttctacagtcgaatttcgaagactattttccgctttctcaatcaatagcctcatctgatga |
23917435 |
T |
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| Q |
207 |
aattttttcagaatcaagcctgagtggctcatcatatatttcacttcctgaggaggcatacactgaaaatgcatgttctgaaactatacattcgagtgtg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
23917436 |
aattttttcagaatcaagcctgagtggctcatcatatatttcacttcctgaggaggcatacactgaaaatgcatgttctgaaactatacattcaagtgta |
23917535 |
T |
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| Q |
307 |
attctcccttctgcgaccgatct |
329 |
Q |
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||||||||||||| ||||||||| |
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| T |
23917536 |
attctcccttctgtgaccgatct |
23917558 |
T |
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