View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_low_31 (Length: 312)
Name: NF10559_low_31
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 47181147 - 47181445
Alignment:
| Q |
1 |
aaaaaggagtgagagagtgagttagtgtaataatggtaaataatgtggagtagttgtagtaatagagagtggttgtgtatgtagtgtttgttttatggcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47181147 |
aaaaaggagtgagagagtgagttagtgtaataatggtaaataatgtggagttgttgtagtaatagagagtggttgtgtatgtagtgtttgttttatggcc |
47181246 |
T |
|
| Q |
101 |
tcagacaagaagaaacgaaagtgagatctccttcttcttatctttgcactctcattttcaagtcaaactacttggtataactcaatttcacaatttacaa |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47181247 |
tcagacaagaagaaaagaaagtgagatctccttcttcttatctttgcactctcattttcaagtcaaactacttggtataactcaatttcacaatttacaa |
47181346 |
T |
|
| Q |
201 |
tacaaaaccatttgtttttgtagtccttccacacatcaatatacggacgggtaggatttggaggtgagtaacaatctactacttacttttccgctttct |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
47181347 |
tacaaaaccatttgtttttgtagtccttccacacatcaatatacggacgggtaggatttggaggtgagtaacaatctactacttacttttgcgctttct |
47181445 |
T |
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