View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10559_low_40 (Length: 292)

Name: NF10559_low_40
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10559_low_40
NF10559_low_40
[»] chr8 (26 HSPs)
chr8 (11-287)||(35437269-35437545)
chr8 (213-273)||(35020958-35021019)
chr8 (213-259)||(40532573-40532618)
chr8 (213-258)||(12209370-12209414)
chr8 (213-258)||(12453798-12453842)
chr8 (213-258)||(18146898-18146942)
chr8 (213-258)||(31719398-31719443)
chr8 (213-258)||(39103670-39103714)
chr8 (213-258)||(40530182-40530227)
chr8 (213-258)||(41356836-41356880)
chr8 (213-258)||(43874506-43874550)
chr8 (213-258)||(45236300-45236345)
chr8 (213-258)||(45237265-45237310)
chr8 (213-259)||(4477116-4477161)
chr8 (213-259)||(5575287-5575333)
chr8 (213-258)||(11687311-11687356)
chr8 (213-258)||(20696710-20696755)
chr8 (213-258)||(25099584-25099629)
chr8 (225-258)||(34618447-34618480)
chr8 (213-258)||(35252539-35252584)
chr8 (213-258)||(38362567-38362612)
chr8 (213-258)||(38745452-38745497)
chr8 (213-258)||(39734712-39734757)
chr8 (213-258)||(42803784-42803829)
chr8 (213-258)||(45069312-45069356)
chr8 (214-258)||(17912010-17912054)
[»] chr7 (28 HSPs)
chr7 (196-258)||(33981626-33981688)
chr7 (213-259)||(30583222-30583267)
chr7 (213-258)||(9806091-9806135)
chr7 (213-258)||(31620063-31620107)
chr7 (213-258)||(35669864-35669908)
chr7 (213-258)||(37657611-37657655)
chr7 (213-258)||(39869513-39869557)
chr7 (213-258)||(40061711-40061755)
chr7 (213-258)||(42329154-42329198)
chr7 (211-264)||(46350169-46350222)
chr7 (213-258)||(46536808-46536853)
chr7 (213-258)||(46733168-46733212)
chr7 (211-254)||(31029944-31029986)
chr7 (211-258)||(34837082-34837129)
chr7 (213-259)||(46615000-46615046)
chr7 (201-258)||(883880-883937)
chr7 (201-258)||(1243209-1243266)
chr7 (213-258)||(4061320-4061365)
chr7 (213-258)||(17845229-17845274)
chr7 (213-258)||(21920271-21920316)
chr7 (213-258)||(27827442-27827487)
chr7 (213-258)||(28493600-28493645)
chr7 (213-258)||(31031327-31031372)
chr7 (213-258)||(31435772-31435816)
chr7 (213-258)||(31968976-31969020)
chr7 (213-258)||(41833174-41833218)
chr7 (213-258)||(44104054-44104099)
chr7 (213-258)||(48312889-48312934)
[»] chr3 (22 HSPs)
chr3 (213-258)||(46115584-46115629)
chr3 (213-258)||(46116251-46116296)
chr3 (208-258)||(6586829-6586878)
chr3 (213-258)||(34435345-34435390)
chr3 (213-258)||(38732710-38732754)
chr3 (213-258)||(40374006-40374050)
chr3 (213-258)||(46668898-46668942)
chr3 (211-258)||(32111051-32111097)
chr3 (213-259)||(30317315-30317361)
chr3 (208-258)||(32389607-32389656)
chr3 (213-258)||(1362404-1362449)
chr3 (213-258)||(8320796-8320841)
chr3 (213-258)||(8880088-8880133)
chr3 (213-258)||(25998509-25998554)
chr3 (213-258)||(30741204-30741249)
chr3 (213-258)||(35324303-35324347)
chr3 (213-258)||(36238570-36238615)
chr3 (213-258)||(36659640-36659684)
chr3 (213-258)||(36807481-36807525)
chr3 (213-258)||(42878478-42878523)
chr3 (213-258)||(52594770-52594815)
chr3 (213-257)||(35406280-35406324)
[»] chr5 (24 HSPs)
chr5 (203-258)||(20768357-20768411)
chr5 (213-258)||(13019548-13019592)
chr5 (213-258)||(15499361-15499406)
chr5 (213-258)||(15525035-15525080)
chr5 (213-258)||(29524693-29524738)
chr5 (213-258)||(37530074-37530119)
chr5 (204-268)||(1621431-1621495)
chr5 (211-258)||(5102168-5102215)
chr5 (213-259)||(22777897-22777943)
chr5 (213-259)||(23591352-23591398)
chr5 (213-258)||(649330-649375)
chr5 (213-258)||(1924466-1924510)
chr5 (213-258)||(2942067-2942112)
chr5 (213-258)||(4558950-4558995)
chr5 (213-258)||(6788942-6788987)
chr5 (213-254)||(7156815-7156856)
chr5 (213-258)||(7947911-7947955)
chr5 (213-273)||(8524536-8524597)
chr5 (213-254)||(24172061-24172102)
chr5 (213-258)||(27812382-27812427)
chr5 (213-258)||(34589252-34589297)
chr5 (213-258)||(36761835-36761880)
chr5 (213-258)||(42710005-42710050)
chr5 (206-254)||(35639489-35639537)
[»] chr4 (22 HSPs)
chr4 (203-258)||(28460168-28460222)
chr4 (213-259)||(30410747-30410792)
chr4 (213-259)||(49334549-49334595)
chr4 (213-258)||(19801191-19801236)
chr4 (213-258)||(19914131-19914175)
chr4 (213-258)||(20530499-20530544)
chr4 (213-258)||(24153247-24153292)
chr4 (213-258)||(41579560-41579605)
chr4 (211-258)||(55611219-55611265)
chr4 (196-258)||(21234150-21234212)
chr4 (213-259)||(26919349-26919395)
chr4 (213-258)||(6244980-6245025)
chr4 (225-258)||(10656852-10656885)
chr4 (213-258)||(10658048-10658093)
chr4 (225-258)||(10870997-10871030)
chr4 (213-258)||(10872193-10872238)
chr4 (213-258)||(30365511-30365556)
chr4 (213-258)||(30654060-30654104)
chr4 (213-254)||(31220646-31220687)
chr4 (213-258)||(47633217-47633262)
chr4 (213-258)||(53284690-53284735)
chr4 (213-265)||(49647917-49647969)
[»] chr2 (22 HSPs)
chr2 (211-258)||(45377471-45377518)
chr2 (213-259)||(1875343-1875389)
chr2 (213-258)||(7454008-7454052)
chr2 (213-258)||(7455217-7455262)
chr2 (213-258)||(18109208-18109252)
chr2 (213-258)||(34246032-34246077)
chr2 (213-258)||(37241745-37241790)
chr2 (213-258)||(40861698-40861742)
chr2 (211-258)||(6321397-6321444)
chr2 (211-258)||(10245766-10245812)
chr2 (211-258)||(15264848-15264895)
chr2 (208-258)||(7182773-7182822)
chr2 (213-251)||(16495945-16495983)
chr2 (213-259)||(40789549-40789595)
chr2 (213-258)||(14452957-14453002)
chr2 (213-258)||(18247381-18247426)
chr2 (213-258)||(21721918-21721963)
chr2 (213-258)||(32481742-32481786)
chr2 (213-258)||(36935420-36935465)
chr2 (213-258)||(36985996-36986041)
chr2 (213-258)||(38325015-38325060)
chr2 (224-256)||(4429039-4429071)
[»] scaffold0115 (1 HSPs)
scaffold0115 (213-258)||(14257-14301)
[»] chr6 (14 HSPs)
chr6 (213-258)||(5976771-5976816)
chr6 (213-258)||(18802264-18802308)
chr6 (213-258)||(22708003-22708048)
chr6 (213-258)||(24118553-24118598)
chr6 (206-258)||(20646378-20646430)
chr6 (213-258)||(191477-191521)
chr6 (211-260)||(1288434-1288483)
chr6 (213-258)||(1790343-1790387)
chr6 (213-258)||(4977076-4977120)
chr6 (213-258)||(18368954-18368999)
chr6 (225-258)||(21527534-21527567)
chr6 (213-258)||(31259051-31259095)
chr6 (213-258)||(32560597-32560642)
chr6 (213-258)||(32561778-32561823)
[»] chr1 (18 HSPs)
chr1 (213-258)||(3795459-3795503)
chr1 (213-258)||(12015379-12015424)
chr1 (213-258)||(14390976-14391020)
chr1 (213-258)||(30358763-30358808)
chr1 (213-258)||(31656911-31656955)
chr1 (213-258)||(35180374-35180418)
chr1 (213-258)||(44277451-44277496)
chr1 (211-258)||(36740206-36740253)
chr1 (211-258)||(38667742-38667788)
chr1 (196-254)||(50939606-50939664)
chr1 (213-258)||(4513596-4513640)
chr1 (213-258)||(4639484-4639529)
chr1 (213-258)||(9224398-9224442)
chr1 (213-258)||(27668201-27668245)
chr1 (213-258)||(39325013-39325057)
chr1 (213-258)||(39326295-39326340)
chr1 (213-258)||(42627736-42627780)
chr1 (213-258)||(50585572-50585617)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 35437545 - 35437269
Alignment:
Q  11 cagagattgagaaaaatacaatttatatctcctttgtcaaatatatttttctccttgttgtggtatcacatgccataatcatcgaaagaaagttctaacg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35437545 cagagattgagaaaaatacaatttatatctcctttgtcaaatatatttttctccttgttgtggtatcacatgccataatcatcgaaagaaagttctaacg 35437446  T
Q  111 attaacaataagaataaaaaacgaaacatttgattcactagcaaacttagaatttccgccatatatacaaggggtctgttggacaaaaatttaaatattc 210  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  35437445 attaacaataagaataaaaaacgaaaaatttgattcactagcaaacttagaatttccgccatatatataaggggtttgttggacaaaaatttaaatattc 35437346  T
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaatacatgtatatatattctttgtataaatt 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35437345 gataaaattagccgttgaagtgacttataaatataaaatgacataaaatacatgtatatatattctttgtataaatt 35437269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 35021019 - 35020958
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa-tacatgtatatatat 273  Q
    |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  35021019 taaaattagctgttgaagtggctgataaatataaaatgacataaaagtacatgtatatatat 35020958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 40532618 - 40532573
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  40532618 taaaattagctgttgaagtgact-ataaatataaaatgacataaaat 40532573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12209414 - 12209370
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  12209414 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 12209370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12453842 - 12453798
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  12453842 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 12453798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 18146942 - 18146898
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  18146942 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 18146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 31719443 - 31719398
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  31719443 taaaattagctgttgaagtgattgataaatataaaatgacataaaa 31719398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 39103670 - 39103714
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  39103670 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 39103714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 40530227 - 40530182
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  40530227 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 40530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 41356880 - 41356836
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  41356880 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 41356836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 43874550 - 43874506
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  43874550 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 43874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 45236300 - 45236345
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  45236300 taaaattagctgttgaagtgattgataaatataaaatgacataaaa 45236345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 45237265 - 45237310
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||    
T  45237265 taaaattagctgttgaagtgactgataaatattaaatgacataaaa 45237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 4477116 - 4477161
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||    
T  4477116 taaaattagctgttgaagtgact-ataaatataaaaagacataaaat 4477161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 5575333 - 5575287
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||| ||||||||||||||||||    
T  5575333 taaaattagctgttgaagtggctgataagtataaaatgacataaaat 5575287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 11687356 - 11687311
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||| ||||| ||||||||||||||||||||||    
T  11687356 taaaattagttgttgaaatgactgataaatataaaatgacataaaa 11687311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 20696710 - 20696755
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  20696710 taaaattagctgttgaagtggctaataagtataaaatgacataaaa 20696755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 25099584 - 25099629
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||  || ||||||||||||||||||||||    
T  25099584 taaaattagctgttgaagtagctgataaatataaaatgacataaaa 25099629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 34618480 - 34618447
Alignment:
Q  225 ttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  34618480 ttgaagtgactgataaatataaaatgacataaaa 34618447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 35252539 - 35252584
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||| | |||||| ||||| ||||||||||||||||||||||    
T  35252539 taaaattaactgttgaactgactgataaatataaaatgacataaaa 35252584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 38362612 - 38362567
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| |||| |||||||||||||||||    
T  38362612 taaaattagatgttgaagtgactgataagtataaaatgacataaaa 38362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 38745452 - 38745497
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  38745452 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 38745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 39734757 - 39734712
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  39734757 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 39734712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 42803829 - 42803784
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||||| ||||| || |||||||||||||||| |||||    
T  42803829 taaaattagccgtttaagtggctgataaatataaaatgacgtaaaa 42803784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 45069312 - 45069356
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  45069312 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 45069356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 17912010 - 17912054
Alignment:
Q  214 aaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||  |||||||||||| || |||||||||||||||||||    
T  17912010 aaaattagttgttgaagtgactgattaatataaaatgacataaaa 17912054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 33981626 - 33981688
Alignment:
Q  196 aaaatttaaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||| |||| || |||||||||||| ||||||||| || ||||||||||||||||||||||    
T  33981626 aaaattgaaatgtttgataaaattagctgttgaagtggctgataaatataaaatgacataaaa 33981688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 30583267 - 30583222
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  30583267 taaaattagctgttgaagtgact-ataaatataaaatgacataaaat 30583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 9806091 - 9806135
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  9806091 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 9806135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 31620107 - 31620063
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  31620107 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 31620063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 35669864 - 35669908
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  35669864 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 35669908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 37657611 - 37657655
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  37657611 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 37657655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 39869513 - 39869557
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  39869513 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 39869557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 40061755 - 40061711
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  40061755 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 40061711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 42329154 - 42329198
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  42329154 taaaattagctgttgaagtga-ttataaatataaaatgacataaaa 42329198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 46350169 - 46350222
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaatacatg 264  Q
    |||||||||||| ||||||||| || |||| ||||||||||||||||| |||||    
T  46350169 gataaaattagctgttgaagtggctgataagtataaaatgacataaaagacatg 46350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 46536853 - 46536808
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||    
T  46536853 taaaattagctgttgaagtgactgataagtataaaatgacataaaa 46536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 46733212 - 46733168
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  46733212 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 46733168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 31029944 - 31029986
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  31029944 gataaaattagctgttgaagtgac-tataaatataaaatgacat 31029986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 34837082 - 34837129
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||| ||| | |||||||| ||||||||||||||||||||||||||    
T  34837082 gataaacttaacggttgaagtaacttataaatataaaatgacataaaa 34837129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 46615000 - 46615046
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||| ||||||||||||||||||    
T  46615000 taaaattagctgttgaagtggctgataagtataaaatgacataaaat 46615046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 883937 - 883880
Alignment:
Q  201 ttaaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||| |||||||||| | ||||||||  ||||||||||| |||||||||||||    
T  883937 ttaactatttgataaaattaacggttgaagtagcttataaatatgaaatgacataaaa 883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 1243266 - 1243209
Alignment:
Q  201 ttaaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||| |||||||||| | ||||||||  ||||||||||| |||||||||||||    
T  1243266 ttaactatttgataaaattaacggttgaagtagcttataaatatgaaatgacataaaa 1243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 4061365 - 4061320
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  4061365 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 4061320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 17845274 - 17845229
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||| || |||||||||||| |||||||||||||||    
T  17845274 taaaattagcggttcaactgacttataaatgtaaaatgacataaaa 17845229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 21920271 - 21920316
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| | |||| ||||| ||||||||||||||||||||||    
T  21920271 taaaattagctgctgaaatgactgataaatataaaatgacataaaa 21920316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 27827487 - 27827442
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  27827487 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 27827442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 28493600 - 28493645
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  28493600 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 28493645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 31031327 - 31031372
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  ||||||||| || ||||||||||||||||||||||    
T  31031327 taaaattagttgttgaagtggctgataaatataaaatgacataaaa 31031372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 31435772 - 31435816
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  31435772 taaaattagatgttgaagtgact-ataaatataaaatgacataaaa 31435816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 31968976 - 31969020
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  31968976 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 31969020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 41833174 - 41833218
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||    
T  41833174 taaaattagctgttgaagtgact-acaaatataaaatgacataaaa 41833218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 44104054 - 44104099
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||   |||||||||| ||||||||||||||||||||||    
T  44104054 taaaattagcttctgaagtgactgataaatataaaatgacataaaa 44104099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 48312889 - 48312934
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  48312889 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 48312934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 46115629 - 46115584
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  46115629 taaaattagctgttgaagtgactgataaatataaaatgacataaaa 46115584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 46116296 - 46116251
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  46116296 taaaattagctgttgaagtgactgataaatataaaatgacataaaa 46116251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 6586878 - 6586829
Alignment:
Q  208 ttcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  6586878 ttcggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 6586829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 34435345 - 34435390
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  34435345 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 34435390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 38732754 - 38732710
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  38732754 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 38732710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 40374006 - 40374050
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  40374006 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 40374050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 46668942 - 46668898
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  46668942 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 46668898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 32111051 - 32111097
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  32111051 gataaaattagatgttgaagtgact-ataaatataaaatgacataaaa 32111097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 30317315 - 30317361
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||| ||||||||||||||||||    
T  30317315 taaaattagctgttgaagtggctgataagtataaaatgacataaaat 30317361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 32389607 - 32389656
Alignment:
Q  208 ttcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||||||| | |||||||||||| ||||||||||||||||||||||    
T  32389607 ttcggtaaaattaactgttgaagtgact-ataaatataaaatgacataaaa 32389656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 1362449 - 1362404
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  1362449 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 1362404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 8320796 - 8320841
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  8320796 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 8320841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 8880133 - 8880088
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  8880133 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 8880088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 25998509 - 25998554
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| || |||||||||||||||||||    
T  25998509 taaaattagttgttgaagtgactgattaatataaaatgacataaaa 25998554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 30741204 - 30741249
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||| ||||||| |||||||||    
T  30741204 taaaattagctgttgaagtgactgataagtataaaaggacataaaa 30741249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 35324303 - 35324347
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  35324303 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 35324347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 36238615 - 36238570
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  36238615 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 36238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 36659640 - 36659684
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||    
T  36659640 taaaattagctgttgaagtgac-tataaatataaaatggcataaaa 36659684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 36807525 - 36807481
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  36807525 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 36807481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 42878523 - 42878478
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  42878523 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 42878478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 52594770 - 52594815
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||| | ||| || ||||||||||||||||||||||||||||    
T  52594770 taaaattaacggttcaactgacttataaatataaaatgacataaaa 52594815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 35406324 - 35406280
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaa 257  Q
    |||||||||| ||||||||| || |||| ||||||||||||||||    
T  35406324 taaaattagctgttgaagtggctgataagtataaaatgacataaa 35406280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 20768357 - 20768411
Alignment:
Q  203 aaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||| | |||||||||| |||||||||||| ||||||||||||||||||||||    
T  20768357 aaatatttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 20768411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 13019592 - 13019548
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  13019592 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 13019548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 15499406 - 15499361
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  15499406 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 15499361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 15525080 - 15525035
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  15525080 taaaattagatgttgaagtgactgataaatataaaatgacataaaa 15525035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 29524693 - 29524738
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  29524693 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 29524738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 37530074 - 37530119
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  37530074 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 37530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 1621431 - 1621495
Alignment:
Q  204 aatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaatacatgtata 268  Q
    ||||| || |||||||||| ||||||||  ||||||||||| ||||||||||||| | |||||||    
T  1621431 aatatccggtaaaattagcggttgaagtagcttataaatatgaaatgacataaaaaaaatgtata 1621495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 5102168 - 5102215
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||  ||||||||| || ||||||||||||||||||||||    
T  5102168 gataaaattagttgttgaagtggctgataaatataaaatgacataaaa 5102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 22777943 - 22777897
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    ||||||||||||||||||||  | |||| ||||||||||||||||||    
T  22777943 taaaattagccgttgaagtggttgataagtataaaatgacataaaat 22777897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 23591398 - 23591352
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||| ||||||||||||||||||    
T  23591398 taaaattagctgttgaagtgtctgataagtataaaatgacataaaat 23591352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 649375 - 649330
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||| || |||||||||||| |||||||||||||||    
T  649375 taaaattagcggtttaactgacttataaatgtaaaatgacataaaa 649330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 1924510 - 1924466
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||    
T  1924510 taaaattagttgttgaagtga-ttataaatataaaatgacataaaa 1924466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 2942112 - 2942067
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||| | ||||||||||||||||||||||||||    
T  2942112 taaaattagtggttgaactaacttataaatataaaatgacataaaa 2942067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 4558950 - 4558995
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||| ||| |||||||| | ||||||||||||||||||||||    
T  4558950 taaaattaaccgctgaagtgagtgataaatataaaatgacataaaa 4558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 6788942 - 6788987
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  6788942 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 6788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 7156815 - 7156856
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  7156815 taaaattagctgttgaagtgactgattaatataaaatgacat 7156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 7947911 - 7947955
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  7947911 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 7947955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 8524597 - 8524536
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat-acatgtatatatat 273  Q
    |||||||||  ||||||||| || |||| |||||||||||||||||| |||||| |||||||    
T  8524597 taaaattagatgttgaagtggctaataagtataaaatgacataaaatgacatgtttatatat 8524536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 24172102 - 24172061
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||||||||| |||||||||||| |||| |||||||||||||    
T  24172102 taaaattagctgttgaagtgactgataagtataaaatgacat 24172061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 27812382 - 27812427
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||||    
T  27812382 taaaattagctgttaaagtgactgataagtataaaatgacataaaa 27812427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 34589252 - 34589297
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  34589252 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 34589297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 36761880 - 36761835
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  36761880 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 36761835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 42710050 - 42710005
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  42710050 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 42710005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 35639537 - 35639489
Alignment:
Q  206 tattcgataaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||| |||||||||||| ||||||||| || |||| |||||||||||||    
T  35639537 tatttgataaaattagctgttgaagtggctgataagtataaaatgacat 35639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 28460222 - 28460168
Alignment:
Q  203 aaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||| | |||||||||| |||||||||||| ||||||||||||||||||||||    
T  28460222 aaatatttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 28460168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 30410747 - 30410792
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  30410747 taaaattagctgttgaagtgact-ataaatataaaatgacataaaat 30410792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 49334549 - 49334595
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||    
T  49334549 taaaattagctgttgaagtggctgataaatataaaatgacataaaat 49334595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 19801191 - 19801236
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  19801191 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 19801236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 19914175 - 19914131
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  19914175 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 19914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 20530499 - 20530544
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  20530499 taaaattagcggttgaagtgactaataaatataaaatgacctaaaa 20530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 24153292 - 24153247
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  24153292 taaaattagctgttgaaatgactgataaatataaaatgacataaaa 24153247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 41579605 - 41579560
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  41579605 taaaattagtcgttgaagtgactgataaatataaaatgacgtaaaa 41579560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 55611265 - 55611219
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  55611265 gataaaattagctgttaaagtgact-ataaatataaaatgacataaaa 55611219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 21234150 - 21234212
Alignment:
Q  196 aaaatttaaatattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||| |||| || | |||||||| | |||||| ||||| ||||||||||||||||||||||    
T  21234150 aaaattaaaatgtttggtaaaattaactgttgaaatgactgataaatataaaatgacataaaa 21234212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 26919349 - 26919395
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||  |||||||||||| |||| ||||||||||||||||||    
T  26919349 taaaattagatgttgaagtgactgataagtataaaatgacataaaat 26919395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 6245025 - 6244980
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  6245025 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 6244980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 10656885 - 10656852
Alignment:
Q  225 ttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  10656885 ttgaagtgactgataaatataaaatgacataaaa 10656852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 10658048 - 10658093
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| |||| |||||||||||||||||    
T  10658048 taaaattagttgttgaagtgactgataagtataaaatgacataaaa 10658093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 10871030 - 10870997
Alignment:
Q  225 ttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  10871030 ttgaagtgactgataaatataaaatgacataaaa 10870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 10872193 - 10872238
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| |||| |||||||||||||||||    
T  10872193 taaaattagttgttgaagtgactgataagtataaaatgacataaaa 10872238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 30365511 - 30365556
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||| || |||||||||||| |||||||||||||||    
T  30365511 taaaattagcggtttaactgacttataaatgtaaaatgacataaaa 30365556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 30654104 - 30654060
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  30654104 taaaattagctgttgaagtgagt-ataaatataaaatgacataaaa 30654060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 31220687 - 31220646
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||||||||  |||||||||||| ||||||||||||||||||    
T  31220687 taaaattagttgttgaagtgactcataaatataaaatgacat 31220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 47633217 - 47633262
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  47633217 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 47633262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 53284735 - 53284690
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  ||||||||| || ||||||||||||||||||||||    
T  53284735 taaaattagttgttgaagtggctgataaatataaaatgacataaaa 53284690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 49647917 - 49647969
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaatacatgt 265  Q
    |||||||||| |||||| || || |||| ||||||||||||||||| ||||||    
T  49647917 taaaattagctgttgaaatggctgataagtataaaatgacataaaagacatgt 49647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 45377518 - 45377471
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  45377518 gataaaattagctgttgaaatgactgataaatataaaatgacataaaa 45377471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 1875343 - 1875389
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||    
T  1875343 taaaattagctgttgaagtggctgataaatataaaatgacataaaat 1875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 7454008 - 7454052
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  7454008 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 7454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 7455262 - 7455217
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  7455262 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 7455217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 18109208 - 18109252
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  18109208 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 18109252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 34246077 - 34246032
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  34246077 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 34246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 37241790 - 37241745
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  37241790 taaaattagctgttgaagtgactgataaatataaaatgacgtaaaa 37241745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 40861698 - 40861742
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  40861698 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 40861742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 6321397 - 6321444
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||||    
T  6321397 gataaaattagctgttgaagtggctgataagtataaaatgacataaaa 6321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 10245766 - 10245812
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  10245766 gataaaattagctgttgaaatgact-ataaatataaaatgacataaaa 10245812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 15264848 - 15264895
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| |||||||||||| || |||||||||||| ||||||    
T  15264848 gataaaattagctgttgaagtgactgattaatataaaatgatataaaa 15264895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 7182773 - 7182822
Alignment:
Q  208 ttcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||||||||    
T  7182773 ttcggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaa 7182822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 16495945 - 16495983
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatga 251  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  16495945 taaaattagctgttgaagtgactgataaatataaaatga 16495983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 40789595 - 40789549
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaat 259  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  40789595 taaaattagctgttgaaatgactgataaatataaaataacataaaat 40789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 14453002 - 14452957
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  ||||||||| || ||||||||||||||||||||||    
T  14453002 taaaattagatgttgaagtggctgataaatataaaatgacataaaa 14452957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 18247426 - 18247381
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| |||| |||||||||||||||||    
T  18247426 taaaattagttgttgaagtgactgataagtataaaatgacataaaa 18247381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 21721963 - 21721918
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||| |  |||||||||||||||||||||||||    
T  21721963 taaaattagcagttgaaatagcttataaatataaaatgacataaaa 21721918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 32481742 - 32481786
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||    
T  32481742 taaaattagttgttgaagtga-ttataaatataaaatgacataaaa 32481786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 36935420 - 36935465
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  36935420 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 36935465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 36985996 - 36986041
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  36985996 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 36986041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 38325060 - 38325015
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  38325060 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 38325015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 4429039 - 4429071
Alignment:
Q  224 gttgaagtgacttataaatataaaatgacataa 256  Q
    |||||||||||||||| ||||||||||||||||    
T  4429039 gttgaagtgacttatacatataaaatgacataa 4429071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 14301 - 14257
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  14301 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 14257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 5976816 - 5976771
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||    
T  5976816 taaaatttgcagttgaagtaacttataaatataaaatgacataaaa 5976771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 18802308 - 18802264
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  18802308 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 18802264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 22708048 - 22708003
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  22708048 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 22708003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 24118553 - 24118598
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  24118553 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 24118598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 20646430 - 20646378
Alignment:
Q  206 tattcgataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||| |||||||||||| ||||||||| || |||| |||||||||||||||||    
T  20646430 tatttgataaaattagctgttgaagtggctgataagtataaaatgacataaaa 20646378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 191521 - 191477
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||    
T  191521 taaaattagctgttgaagtgact-ataaatataaactgacataaaa 191477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 1288483 - 1288434
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaata 260  Q
    |||||||||| | |||||| | |||||||||||| |||||||||||||||    
T  1288483 gataaaattaacggttgaaataacttataaatatgaaatgacataaaata 1288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 1790387 - 1790343
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||    
T  1790387 taaaattagttgttgaagtgact-ataaatataaaatgacataaaa 1790343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 4977120 - 4977076
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||| | |||||||||||| ||||||||||||||||||||||    
T  4977120 taaaattaactgttgaagtgact-ataaatataaaatgacataaaa 4977076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 18368954 - 18368999
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||| |||||||| ||||||||    
T  18368954 taaaattagctgttgaagtgactgataagtataaaataacataaaa 18368999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 21527567 - 21527534
Alignment:
Q  225 ttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  21527567 ttgaagtgactcataaatataaaatgacataaaa 21527534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 31259051 - 31259095
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||    
T  31259051 taaaattagctattgaagtgact-ataaatataaaatgacataaaa 31259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 32560642 - 32560597
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||  ||||||||| || ||||||||||||||||||||||    
T  32560642 taaaattagttgttgaagtggctgataaatataaaatgacataaaa 32560597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 32561778 - 32561823
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  32561778 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 32561823  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 3795459 - 3795503
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  3795459 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 3795503  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12015424 - 12015379
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  12015424 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 12015379  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 14391020 - 14390976
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  14391020 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 14390976  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 30358808 - 30358763
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  30358808 taaaattagctgttgaagtggctgataaatataaaatgacataaaa 30358763  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 31656955 - 31656911
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  31656955 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 31656911  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 35180418 - 35180374
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  35180418 taaaattagctgttgaagtgact-ataaatataaaatgacataaaa 35180374  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 44277451 - 44277496
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  44277451 taaaattagctgttgaaatgactgataaatataaaatgacataaaa 44277496  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 36740253 - 36740206
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||| ||||||||| || |||| |||||||||||||||||    
T  36740253 gataaaattagctgttgaagtggctgataagtataaaatgacataaaa 36740206  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 38667788 - 38667742
Alignment:
Q  211 gataaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  38667788 gataaaattagttgttgaagtgact-ataaatataaaatgacataaaa 38667742  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 50939606 - 50939664
Alignment:
Q  196 aaaatttaaatattcgataaaattagccgttgaagtgacttataaatataaaatgacat 254  Q
    |||||| ||||||| |||||||||| | |||||| |  |||||||||||||||||||||    
T  50939606 aaaattaaaatatttgataaaattaactgttgaattagcttataaatataaaatgacat 50939664  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 4513640 - 4513596
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  4513640 taaaattagctgttgaagtgact-ataaatataaaaggacataaaa 4513596  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 4639484 - 4639529
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||| ||||| |||| |||||||||||||||||    
T  4639484 taaaattagctgttgaattgactgataagtataaaatgacataaaa 4639529  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 9224442 - 9224398
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  9224442 taaaattagctgttgaagtgact-ataaatataaaataacataaaa 9224398  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 27668245 - 27668201
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||| | |||||||||||| ||||||||||||||||||||||    
T  27668245 taaaattaactgttgaagtgact-ataaatataaaatgacataaaa 27668201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 39325013 - 39325057
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||    
T  39325013 taaaattagctattgaagtgact-ataaatataaaatgacataaaa 39325057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 39326340 - 39326295
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  39326340 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 39326295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 42627736 - 42627780
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||    
T  42627736 taaaattagctgttgaagtgac-tataaatataaaataacataaaa 42627780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 50585572 - 50585617
Alignment:
Q  213 taaaattagccgttgaagtgacttataaatataaaatgacataaaa 258  Q
    |||||||||| ||||||||| || |||| |||||||||||||||||    
T  50585572 taaaattagctgttgaagtggctgataagtataaaatgacataaaa 50585617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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