View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_low_48 (Length: 255)
Name: NF10559_low_48
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_low_48 |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 32531908 - 32532125
Alignment:
| Q |
17 |
caggaactggagtt--gtaacaaacttatgcatgtgggctgtggaggaatctgattgttctatgttatgtt-ctctatctgtgttctgtgggtcccaaaa |
113 |
Q |
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| T |
32531908 |
caggaactggagttttgtaacaaacttttgcatgtgggctgtggaggaatctgattgttctatgttatgtttctctctttgtgttctgtgggtcccaaaa |
32532007 |
T |
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| Q |
114 |
tctgatatccatcattatggctctaaaataattagcagaaactgtcataaaaaattgacagaaagagttgtagggcccttactatccccaatagcacgtg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32532008 |
tctgatatccatcattatggctctaaaataattagcagaaactgtcataaaaaattgacagaaagagttgtagggcccttaccatccccaatagcacgtg |
32532107 |
T |
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| Q |
214 |
tgtcaataatgacctgtt |
231 |
Q |
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|||||||||||||||||| |
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| T |
32532108 |
tgtcaataatgacctgtt |
32532125 |
T |
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