View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_low_55 (Length: 250)
Name: NF10559_low_55
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 51423740 - 51423981
Alignment:
| Q |
1 |
ttccagctttgtattcagcaattttaagataagcaggtttggctaaatcaaagtgctcacgtggtgggttgcaccatcctccattctcacttgattgggc |
100 |
Q |
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| T |
51423740 |
ttccagctttgtattcagcaattttaagataagcaggtttggctaaatcaaagtgctcacgtggtgggttgcaccatcctccattctcacttgattgggc |
51423839 |
T |
|
| Q |
101 |
aaaattgggaggacaaaggtctgttgccgtcactttaatagaggcttgctctggcttacacccttgaggagagtccacacatctgatttcataacatgca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51423840 |
aaaattgggaggacaaaggtctgttgccgtcactttaatagaggcttgccctggcttacacccttgaggagagtccacacatctgatttcataacatgca |
51423939 |
T |
|
| Q |
201 |
ccacatgctagacctttgttgaacaaaactgtgctctctgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||| |
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| T |
51423940 |
ccacatgctagacctttgttgaacaaaactgtgctcactgct |
51423981 |
T |
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