View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_low_58 (Length: 247)
Name: NF10559_low_58
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_low_58 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 51544800 - 51544984
Alignment:
| Q |
14 |
aagcataggtatgaaagtgtagtctattaattgtaactatgatatttgctatttaaaaataaataaaattgtaaataatgtatcagagttagtaggcata |
113 |
Q |
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| T |
51544800 |
aagcacaggtatgaaagtgtagtctattaattgtaactatgatatttgctatttaaaaaaaaataaaattgtaaataatgtatcagagttagtaggcata |
51544899 |
T |
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| Q |
114 |
tggtagtaagtgtaagatagtgaacgggcaatgtcttttccaaggatacaaagttgagttaaacctttgttaagttcctttaaat |
198 |
Q |
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| T |
51544900 |
tggtagtaagtgtaagatagtgaacgggcaatgtcttttccaaggatacaaagttgagttaaacctttgttaagttcctttaaat |
51544984 |
T |
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