View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10559_low_66 (Length: 240)
Name: NF10559_low_66
Description: NF10559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10559_low_66 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 35026050 - 35025826
Alignment:
| Q |
1 |
tttttgaaattt-gatgtgtaatgttgttctaccaaaataaaaattgatgtataatgttccttaagtataactcaaatggtaaaaagctatatagatatt |
99 |
Q |
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|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
35026050 |
tttttgaaattttgatgtgtaaggttgttctaccaaaataaaaattgatgtataatgttccgtaagtataactcaaatggtaaaaagctatatagatatt |
35025951 |
T |
|
| Q |
100 |
tgatatatttaagagataatttgaatatgtaatacctctcttctccgaggctagtgtatataaattttgctgctagctctatataacaaaaaattgatgt |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35025950 |
tgatatatttaagagataatttgaatatgtaatacctctcttctccgaggctagtgtatataaattttgctgctagctctatataacaaaaaattgatgt |
35025851 |
T |
|
| Q |
200 |
acaatgaaaattttgtagtgtatgt |
224 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
35025850 |
acaatgaaaattttgtagtgtatgt |
35025826 |
T |
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