View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10560_low_15 (Length: 273)

Name: NF10560_low_15
Description: NF10560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10560_low_15
NF10560_low_15
[»] chr4 (47 HSPs)
chr4 (14-197)||(2069304-2069480)
chr4 (87-185)||(33332379-33332477)
chr4 (87-197)||(43853653-43853763)
chr4 (92-197)||(1621305-1621410)
chr4 (86-157)||(37465723-37465794)
chr4 (79-157)||(6155001-6155079)
chr4 (87-185)||(36161933-36162031)
chr4 (92-157)||(18936032-18936097)
chr4 (92-197)||(36194918-36195023)
chr4 (80-157)||(42032311-42032388)
chr4 (92-160)||(27652190-27652258)
chr4 (79-197)||(22038590-22038708)
chr4 (79-160)||(9714157-9714237)
chr4 (86-160)||(48350982-48351056)
chr4 (87-185)||(52933738-52933836)
chr4 (107-160)||(55656635-55656688)
chr4 (100-185)||(31891085-31891174)
chr4 (79-157)||(37684103-37684181)
chr4 (103-156)||(7393449-7393502)
chr4 (79-140)||(9048930-9048991)
chr4 (79-127)||(36204172-36204220)
chr4 (79-128)||(19853304-19853353)
chr4 (79-128)||(21686034-21686083)
chr4 (79-128)||(26633463-26633512)
chr4 (79-128)||(56040438-56040487)
chr4 (81-124)||(28857672-28857715)
chr4 (79-125)||(4142556-4142602)
chr4 (79-125)||(45418765-45418811)
chr4 (79-117)||(56156440-56156478)
chr4 (79-128)||(2521047-2521096)
chr4 (79-128)||(13634383-13634432)
chr4 (79-128)||(32766782-32766831)
chr4 (79-144)||(51535478-51535542)
chr4 (79-128)||(52979012-52979061)
chr4 (88-124)||(6882369-6882405)
chr4 (88-124)||(7084367-7084403)
chr4 (88-124)||(13965968-13966004)
chr4 (88-124)||(14346835-14346871)
chr4 (92-124)||(14542190-14542222)
chr4 (88-124)||(24826064-24826100)
chr4 (88-124)||(31522371-31522407)
chr4 (88-124)||(38435002-38435038)
chr4 (88-124)||(42197978-42198014)
chr4 (88-124)||(45350730-45350766)
chr4 (88-124)||(45360209-45360245)
chr4 (79-127)||(47320205-47320253)
chr4 (88-128)||(48257433-48257473)
[»] chr8 (40 HSPs)
chr8 (79-185)||(8868012-8868118)
chr8 (92-197)||(14585869-14585974)
chr8 (92-197)||(18890491-18890596)
chr8 (93-185)||(41896721-41896812)
chr8 (92-185)||(42046425-42046518)
chr8 (81-197)||(43833777-43833893)
chr8 (79-158)||(34610067-34610146)
chr8 (82-159)||(18846251-18846328)
chr8 (79-128)||(40618863-40618912)
chr8 (87-155)||(19443851-19443919)
chr8 (79-157)||(470937-471021)
chr8 (79-128)||(23230893-23230942)
chr8 (79-127)||(24099047-24099095)
chr8 (79-125)||(21238040-21238086)
chr8 (79-125)||(33299117-33299163)
chr8 (79-157)||(34493234-34493312)
chr8 (79-128)||(9637199-9637248)
chr8 (79-127)||(1236488-1236536)
chr8 (79-123)||(3240636-3240680)
chr8 (80-128)||(40211091-40211139)
chr8 (79-122)||(3673697-3673740)
chr8 (79-125)||(17693403-17693449)
chr8 (87-157)||(20227075-20227145)
chr8 (79-125)||(30568111-30568157)
chr8 (92-122)||(39657634-39657664)
chr8 (79-128)||(7883031-7883080)
chr8 (79-128)||(28086602-28086651)
chr8 (80-160)||(41060042-41060123)
chr8 (88-125)||(41362157-41362194)
chr8 (88-124)||(1809906-1809942)
chr8 (88-124)||(2234138-2234174)
chr8 (88-124)||(2968940-2968976)
chr8 (92-124)||(8054486-8054518)
chr8 (88-124)||(9501993-9502029)
chr8 (87-127)||(15344560-15344600)
chr8 (87-127)||(15433625-15433665)
chr8 (87-127)||(15524929-15524969)
chr8 (88-124)||(24790838-24790874)
chr8 (88-124)||(31202873-31202909)
chr8 (80-128)||(45445602-45445650)
[»] chr3 (61 HSPs)
chr3 (79-157)||(53508451-53508529)
chr3 (92-185)||(8914913-8915006)
chr3 (100-197)||(16235615-16235712)
chr3 (92-197)||(21289608-21289713)
chr3 (79-156)||(41818445-41818522)
chr3 (92-160)||(27706020-27706088)
chr3 (93-197)||(27856354-27856458)
chr3 (92-160)||(51923953-51924021)
chr3 (95-185)||(42460950-42461040)
chr3 (79-145)||(55061754-55061820)
chr3 (81-157)||(3085085-3085161)
chr3 (92-160)||(7546842-7546910)
chr3 (79-185)||(48199982-48200086)
chr3 (93-160)||(52115812-52115879)
chr3 (79-145)||(26715914-26715980)
chr3 (81-147)||(32246650-32246718)
chr3 (79-128)||(46304313-46304362)
chr3 (79-135)||(14859735-14859791)
chr3 (79-127)||(50194128-50194176)
chr3 (79-125)||(628716-628762)
chr3 (87-125)||(35175653-35175691)
chr3 (87-125)||(35864761-35864799)
chr3 (79-128)||(20464757-20464806)
chr3 (131-180)||(32460806-32460855)
chr3 (79-128)||(43017135-43017184)
chr3 (79-123)||(23799740-23799784)
chr3 (100-197)||(38142714-38142813)
chr3 (81-128)||(37041015-37041062)
chr3 (81-128)||(45568239-45568286)
chr3 (79-125)||(24396291-24396337)
chr3 (87-125)||(32881159-32881197)
chr3 (79-125)||(52922909-52922955)
chr3 (79-128)||(6954488-6954537)
chr3 (79-128)||(9797326-9797375)
chr3 (87-124)||(12946768-12946805)
chr3 (88-125)||(14585886-14585923)
chr3 (88-125)||(19645614-19645651)
chr3 (79-128)||(21313283-21313332)
chr3 (79-128)||(21533601-21533650)
chr3 (87-144)||(25460787-25460844)
chr3 (87-128)||(36910566-36910607)
chr3 (79-128)||(40487572-40487621)
chr3 (79-128)||(47041840-47041889)
chr3 (88-125)||(50981134-50981171)
chr3 (88-125)||(51084268-51084305)
chr3 (92-160)||(51487308-51487381)
chr3 (88-124)||(1074562-1074598)
chr3 (88-124)||(2192503-2192539)
chr3 (88-128)||(7448715-7448755)
chr3 (88-128)||(7456857-7456897)
chr3 (88-124)||(11819509-11819545)
chr3 (88-124)||(13701670-13701706)
chr3 (88-124)||(24483364-24483400)
chr3 (88-124)||(32080431-32080467)
chr3 (79-123)||(47896403-47896447)
chr3 (88-124)||(48401517-48401553)
chr3 (80-128)||(48650527-48650575)
chr3 (88-124)||(49627772-49627808)
chr3 (88-128)||(54149238-54149278)
chr3 (88-124)||(54706400-54706436)
chr3 (88-124)||(55090367-55090403)
[»] scaffold0021 (1 HSPs)
scaffold0021 (79-160)||(4373-4454)
[»] chr7 (38 HSPs)
chr7 (79-160)||(11344038-11344119)
chr7 (79-160)||(25068286-25068367)
chr7 (87-197)||(46822532-46822642)
chr7 (92-185)||(35133151-35133244)
chr7 (92-160)||(48930936-48931004)
chr7 (79-160)||(3876033-3876114)
chr7 (79-160)||(46821533-46821614)
chr7 (79-163)||(38880405-38880489)
chr7 (79-146)||(11654043-11654110)
chr7 (79-160)||(24069182-24069263)
chr7 (87-144)||(31481887-31481944)
chr7 (79-157)||(4999810-4999888)
chr7 (95-160)||(28476455-28476520)
chr7 (79-127)||(41553228-41553276)
chr7 (92-134)||(2407844-2407886)
chr7 (79-125)||(17611647-17611693)
chr7 (79-128)||(9977002-9977051)
chr7 (79-128)||(12141099-12141148)
chr7 (79-128)||(28044548-28044597)
chr7 (93-160)||(25255456-25255521)
chr7 (81-125)||(28407712-28407756)
chr7 (87-158)||(14046504-14046575)
chr7 (87-158)||(14356534-14356605)
chr7 (79-126)||(48061674-48061721)
chr7 (87-157)||(44311588-44311658)
chr7 (87-128)||(25286988-25287029)
chr7 (88-124)||(2623017-2623053)
chr7 (79-127)||(3222897-3222945)
chr7 (88-124)||(4621040-4621076)
chr7 (88-124)||(11833443-11833479)
chr7 (89-125)||(21603882-21603918)
chr7 (88-124)||(21991087-21991123)
chr7 (88-124)||(25854886-25854922)
chr7 (141-197)||(31235607-31235663)
chr7 (88-128)||(37837259-37837299)
chr7 (88-124)||(41288381-41288417)
chr7 (88-124)||(44482538-44482574)
chr7 (88-124)||(48643486-48643522)
[»] chr6 (38 HSPs)
chr6 (92-197)||(8102917-8103022)
chr6 (93-197)||(14802018-14802123)
chr6 (79-157)||(31851673-31851751)
chr6 (92-185)||(30776866-30776959)
chr6 (100-197)||(546222-546319)
chr6 (100-160)||(679336-679396)
chr6 (79-127)||(31297069-31297117)
chr6 (86-149)||(22571628-22571691)
chr6 (79-133)||(29744479-29744533)
chr6 (93-144)||(10084947-10084998)
chr6 (87-129)||(127913-127955)
chr6 (79-125)||(33052960-33053006)
chr6 (79-128)||(12170717-12170766)
chr6 (79-128)||(32327012-32327061)
chr6 (92-160)||(1523631-1523699)
chr6 (88-127)||(7975989-7976028)
chr6 (101-180)||(27097445-27097524)
chr6 (88-123)||(31936293-31936328)
chr6 (79-128)||(606453-606502)
chr6 (87-128)||(3913374-3913415)
chr6 (79-128)||(7514995-7515044)
chr6 (79-128)||(9341443-9341492)
chr6 (79-196)||(9380215-9380332)
chr6 (79-128)||(14174863-14174912)
chr6 (79-128)||(14179399-14179448)
chr6 (87-128)||(30894847-30894888)
chr6 (87-128)||(32060125-32060166)
chr6 (88-124)||(4660853-4660889)
chr6 (88-124)||(5146351-5146387)
chr6 (88-124)||(6419539-6419575)
chr6 (81-125)||(11321338-11321382)
chr6 (88-124)||(12653978-12654014)
chr6 (88-124)||(15589785-15589821)
chr6 (88-124)||(19402512-19402548)
chr6 (88-124)||(23654674-23654710)
chr6 (87-127)||(28981426-28981466)
chr6 (88-124)||(29920577-29920613)
chr6 (88-124)||(30813482-30813518)
[»] chr2 (58 HSPs)
chr2 (92-185)||(10237011-10237104)
chr2 (93-197)||(3309145-3309249)
chr2 (79-197)||(19595681-19595800)
chr2 (79-160)||(14416392-14416473)
chr2 (79-156)||(14955770-14955847)
chr2 (100-160)||(3460523-3460583)
chr2 (88-160)||(6358672-6358744)
chr2 (82-185)||(28533738-28533842)
chr2 (92-157)||(3465575-3465640)
chr2 (79-127)||(37994542-37994590)
chr2 (86-144)||(37416962-37417020)
chr2 (100-185)||(18107553-18107638)
chr2 (79-127)||(32448410-32448458)
chr2 (81-127)||(32519061-32519107)
chr2 (79-125)||(37876399-37876445)
chr2 (86-160)||(41694857-41694931)
chr2 (79-128)||(5427662-5427711)
chr2 (87-156)||(12553970-12554039)
chr2 (79-128)||(31193129-31193178)
chr2 (79-128)||(31788714-31788763)
chr2 (79-128)||(33923963-33924012)
chr2 (79-128)||(38445424-38445473)
chr2 (88-124)||(5754707-5754743)
chr2 (87-123)||(24461702-24461738)
chr2 (88-124)||(26491705-26491741)
chr2 (80-128)||(35220586-35220634)
chr2 (82-141)||(16376237-16376296)
chr2 (81-160)||(19598076-19598155)
chr2 (79-125)||(4903938-4903984)
chr2 (79-125)||(25508861-25508907)
chr2 (79-125)||(30923250-30923296)
chr2 (79-160)||(33759977-33760056)
chr2 (79-117)||(41328008-41328046)
chr2 (79-128)||(1415815-1415864)
chr2 (87-128)||(11985034-11985075)
chr2 (79-128)||(18763726-18763775)
chr2 (86-123)||(21612501-21612538)
chr2 (87-144)||(22538095-22538152)
chr2 (88-125)||(31908477-31908514)
chr2 (79-128)||(33585528-33585577)
chr2 (79-128)||(36692132-36692181)
chr2 (79-128)||(36942915-36942964)
chr2 (88-125)||(43696292-43696329)
chr2 (88-124)||(3527411-3527447)
chr2 (88-124)||(4739754-4739790)
chr2 (87-123)||(7071434-7071470)
chr2 (88-124)||(13878669-13878705)
chr2 (88-124)||(14018794-14018830)
chr2 (88-124)||(16136503-16136539)
chr2 (88-124)||(20560793-20560829)
chr2 (88-124)||(25068266-25068302)
chr2 (88-124)||(28230757-28230793)
chr2 (89-156)||(28871582-28871647)
chr2 (88-124)||(29543218-29543254)
chr2 (88-124)||(32015678-32015714)
chr2 (88-124)||(33012473-33012509)
chr2 (88-124)||(35333930-35333966)
chr2 (88-124)||(44942711-44942747)
[»] chr1 (43 HSPs)
chr1 (92-197)||(36775504-36775609)
chr1 (92-185)||(48750390-48750483)
chr1 (81-155)||(40163224-40163298)
chr1 (79-185)||(31692248-31692354)
chr1 (79-185)||(13075437-13075543)
chr1 (79-127)||(47133154-47133202)
chr1 (79-132)||(10776253-10776306)
chr1 (79-128)||(26535587-26535636)
chr1 (79-125)||(27456743-27456789)
chr1 (79-129)||(34878070-34878120)
chr1 (79-197)||(50616456-50616574)
chr1 (79-197)||(50624283-50624401)
chr1 (79-128)||(5984067-5984116)
chr1 (79-128)||(11462274-11462323)
chr1 (92-145)||(16162074-16162127)
chr1 (79-128)||(21687629-21687678)
chr1 (79-128)||(39888433-39888482)
chr1 (103-156)||(41994698-41994751)
chr1 (79-128)||(50377574-50377623)
chr1 (79-127)||(12635421-12635469)
chr1 (130-185)||(34412924-34412979)
chr1 (88-134)||(2351016-2351061)
chr1 (81-127)||(24583201-24583247)
chr1 (81-127)||(24583397-24583443)
chr1 (79-160)||(30712084-30712163)
chr1 (87-160)||(34479644-34479715)
chr1 (79-125)||(36894200-36894246)
chr1 (79-125)||(39987678-39987724)
chr1 (87-156)||(45789774-45789841)
chr1 (79-124)||(15836273-15836318)
chr1 (79-120)||(32678936-32678977)
chr1 (87-124)||(33486695-33486732)
chr1 (87-128)||(35484191-35484232)
chr1 (87-128)||(44915890-44915931)
chr1 (79-128)||(49504387-49504436)
chr1 (88-124)||(3233196-3233232)
chr1 (88-124)||(4882037-4882073)
chr1 (92-124)||(11121380-11121412)
chr1 (92-124)||(13969318-13969350)
chr1 (88-124)||(25032763-25032799)
chr1 (88-124)||(29205693-29205729)
chr1 (81-125)||(31919248-31919292)
chr1 (88-124)||(44517573-44517609)
[»] chr5 (35 HSPs)
chr5 (92-197)||(2979100-2979205)
chr5 (100-160)||(19103269-19103329)
chr5 (92-197)||(28540700-28540805)
chr5 (79-157)||(35920777-35920855)
chr5 (92-185)||(14211428-14211521)
chr5 (94-160)||(39567496-39567562)
chr5 (79-125)||(8984781-8984827)
chr5 (79-125)||(13007479-13007525)
chr5 (93-195)||(19121103-19121205)
chr5 (82-132)||(25980400-25980450)
chr5 (79-128)||(6011930-6011979)
chr5 (79-128)||(8088005-8088054)
chr5 (79-128)||(9113517-9113566)
chr5 (79-128)||(14726253-14726302)
chr5 (79-128)||(24229576-24229625)
chr5 (79-128)||(38007604-38007653)
chr5 (87-160)||(38110799-38110872)
chr5 (79-127)||(10332340-10332388)
chr5 (81-160)||(24874755-24874834)
chr5 (88-134)||(17325338-17325383)
chr5 (79-125)||(26877901-26877947)
chr5 (79-128)||(1409747-1409796)
chr5 (92-125)||(15710947-15710980)
chr5 (87-144)||(16758781-16758838)
chr5 (87-128)||(38598044-38598085)
chr5 (88-125)||(42505073-42505110)
chr5 (88-124)||(586165-586201)
chr5 (81-117)||(4771114-4771150)
chr5 (88-124)||(17331753-17331789)
chr5 (141-197)||(19259635-19259691)
chr5 (88-124)||(23881776-23881812)
chr5 (92-124)||(33486247-33486279)
chr5 (88-124)||(34431489-34431525)
chr5 (88-124)||(39531068-39531104)
chr5 (88-120)||(42396170-42396202)
[»] scaffold0888 (1 HSPs)
scaffold0888 (79-185)||(1460-1565)
[»] scaffold0603 (1 HSPs)
scaffold0603 (87-163)||(7940-8016)
[»] scaffold0039 (2 HSPs)
scaffold0039 (87-155)||(93338-93406)
scaffold0039 (79-125)||(53193-53239)
[»] scaffold0015 (1 HSPs)
scaffold0015 (79-197)||(3826-3944)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-127)||(57881-57929)
[»] scaffold0113 (1 HSPs)
scaffold0113 (79-117)||(36465-36503)
[»] scaffold0064 (1 HSPs)
scaffold0064 (106-144)||(18891-18929)
[»] scaffold0121 (1 HSPs)
scaffold0121 (87-128)||(31074-31115)
[»] scaffold0536 (1 HSPs)
scaffold0536 (88-124)||(3320-3356)
[»] scaffold0294 (1 HSPs)
scaffold0294 (88-124)||(3727-3763)
[»] scaffold0155 (1 HSPs)
scaffold0155 (88-124)||(35500-35536)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 197
Target Start/End: Original strand, 2069304 - 2069480
Alignment:
Q  14 cgacagaaaaatactttgagtataattattttacgtatacattcgatcaaatattttannnnnnnacaaaagcaaaacgatattcgttcattcaaattga 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||        ||||||||||||||||||||||||||| |||||||    
T  2069304 cgacagaaaaatactttgagtataattattttacatatacattcgatcaaataattt--ttttttacaaaagcaaaacgatattcgttcatttaaattga 2069401  T
Q  114 tagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    ||||||||||     |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  2069402 tagaatacat-----gcaataacatgatcaatatcgctaaaaacgtagagagtaaatttgcgaacaatctcaaagcatccaagt 2069480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 33332379 - 33332477
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||||||||| | ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| |  || ||||||||||||| ||||    
T  33332379 aaaacgatatccattcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtaaagggtgaatttgcgaacaaactca 33332477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 43853763 - 43853653
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaa 186  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| ||| |  || ||| ||||||||| ||||     
T  43853763 aaaacgatattcattcattcaaattgatagaatacatcagatacaataacatactcaacatcgctaaaaatgtaaatggttaatctgcgaacaaactcac 43853664  T
Q  187 agcatccaagt 197  Q
    | |||||||||    
T  43853663 aacatccaagt 43853653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 1621305 - 1621410
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| |||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||| |  || ||| ||||||||| |||| | |||    
T  1621305 gatattcattcattcaaatttatagaatacatcagagacaataacatgatcaatattgctaaaaacgtatagggtgaatctgcgaacaaactcacaacat 1621404  T
Q  192 ccaagt 197  Q
    ||||||    
T  1621405 ccaagt 1621410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 37465794 - 37465723
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  37465794 caaaacgatattcattcatttaaattgatagaatacatcagatacaataacatgatcaacatcgttaaaaac 37465723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 6155001 - 6155079
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||    
T  6155001 acaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaataaaatgatcaacatcgctaaaaac 6155079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 36162031 - 36161933
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||| | ||| ||| || |||||| ||||    
T  36162031 aaaatgatattcattcattcaaattgatagaatacatcaaatacaataacatgatcaacatcgttaaaaacgtaaagagtgaatctgtgaacaaactca 36161933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 18936097 - 18936032
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  18936097 gatattcattcattcaaattgatagaatacatcagagacaatagcatgatcaatatcgctaaaaac 18936032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 36195023 - 36194918
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| ||||||||||||||||||||||||||||   ||||||| |||||||||| |||||||| || || || ||| ||||||||| |||| | |||    
T  36195023 gatattcattcattcaaattgatagaatacatcagacataataacacgatcaatatcactaaaaacatataaggtgaatctgcgaacaaactcacaacat 36194924  T
Q  192 ccaagt 197  Q
    ||||||    
T  36194923 ccaagt 36194918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 42032311 - 42032388
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||    
T  42032311 caaaagaaaaacgatattcattcattcaaattgatagaatacatcatatgtaataacataatcaacatcgttaaaaac 42032388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 27652258 - 27652190
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| |||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||    
T  27652258 gatattcattcattcaaattgatagaatacatcaaagacaataacatgatcgatatcgctaaaaacgta 27652190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 22038590 - 22038708
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    |||||| |||||||||||||  | ||| ||||||||||||||||||| || ||||||||||||  | ||||||||||||||| |  |||||| | |||||    
T  22038590 acaaaaacaaaacgatattccgtaatttaaattgatagaatacatcaaatacaataacatgatatacatcgctaaaaacgtaaagggtaaatctacgaac 22038689  T
Q  179 aatctcaaagcatccaagt 197  Q
    || |||| | |||||||||    
T  22038690 aaactcacaacatccaagt 22038708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 9714237 - 9714157
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |  ||||||| ||||||| |||| ||||||||||    
T  9714237 acaaaagcaaaatgatattcgttcattcaaattgatagaatacataaaagacaataacctgatcaa-atcgttaaaaacgta 9714157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 48350982 - 48351056
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||||| |||| |  |||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||    
T  48350982 caaaacgacattcataaattcaaattgatagaatacatcagatacaatgacatgatcaacatcgctaataacgta 48351056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 52933738 - 52933836
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||||||||||| || ||||||||||||| ||||||| |||| ||||||||||| ||| ||||||||||| ||| |  |||||| |||| |||| ||||    
T  52933738 aaaacgatattcatttattcaaattgataaaatacattagatacaataacatgaccaacatcgctaaaaatgtaaagcgtaaatctgcgcacaaactca 52933836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 55656688 - 55656635
Alignment:
Q  107 aaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  55656688 aaattgatagaatacattagatgcaataacatgatcaacatagctaaaaacgta 55656635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 31891085 - 31891174
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacat----gatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||||||||||||||||||||||||  ||| |||||    |||||||||||||||||||||| |  || ||||||||||||| ||||    
T  31891085 ttcattcaaattgatagaatacatcagagacaaaaacatgatcgatcaatatcgctaaaaacgtatagggtgaatttgcgaacaaactca 31891174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 37684181 - 37684103
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||||||||| |||  | |||||| ||||||||||||||||| |||| ||||| ||||||||||||| ||| ||||    
T  37684181 acaaaagcaaaacaatacgcattcatttaaattgatagaatacatgagatacaatatcatgatcaatatctctataaac 37684103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 7393502 - 7393449
Alignment:
Q  103 attcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  7393502 attcaaattgatagaatatatcagatacaatattatgatcaatatcgctaaaaa 7393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 9048991 - 9048930
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatga 140  Q
    |||||| ||||||||||||| |||||||||||||||||||||  | |||| |||||||||||    
T  9048991 acaaaaacaaaacgatattcattcattcaaattgatagaataattgagatacaataacatga 9048930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 36204172 - 36204220
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  36204172 acaaaaacaaaacgatattctttcattcaaattgacagaatacatcaga 36204220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 19853304 - 19853353
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  19853304 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 19853353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 21686034 - 21686083
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  21686034 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 21686083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 26633463 - 26633512
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 26633512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 56040438 - 56040487
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 56040487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 28857715 - 28857672
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatc 124  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||    
T  28857715 aaaaacaaaacgatattcattcattcaaattgatataatacatc 28857672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 4142556 - 4142602
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  4142556 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 4142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 45418811 - 45418765
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||  |||| |||||||||||||||||||||    
T  45418811 acaaaaacaaaacgatattaattcactcaaattgatagaatacatca 45418765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 56156440 - 56156478
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgataga 117  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgataga 56156478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 2521096 - 2521047
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| | ||||||||    
T  2521096 acaaaaacaaaacgatattcattcattcaaatcgatagagtccatcagat 2521047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 13634432 - 13634383
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  13634432 acaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagat 13634383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 32766831 - 32766782
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| |||||| |||||| ||||||||||| |||||| ||||||||||    
T  32766831 acaaaaacaaaacaatattcattcattcaaatcgatagagtacatcagat 32766782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 51535542 - 51535478
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||||| |||||| |||||  |||||||||||||||| ||||||| |||| |||||||||| ||||    
T  51535542 acaaaaacaaaacaatatta-ttcattcaaattgataaaatacataagatacaataacatggtcaa 51535478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 52979061 - 52979012
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||||||  | ||||||||||    
T  52979061 acaaaaacaaaacgatattctttcattcaaattgatctagtacatcagat 52979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 6882405 - 6882369
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  6882405 aaacgatattcattcattcaaattgatagagtacatc 6882369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 7084403 - 7084367
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  7084403 aaacgatattcattcattcaaattgatagagtacatc 7084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 13966004 - 13965968
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  13966004 aaacgatattcattcattcaaattgatagagtacatc 13965968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 14346871 - 14346835
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14346871 aaacgatattcattcattcaaattgatagagtacatc 14346835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 14542190 - 14542222
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||| |||||||||||||||||||||||||    
T  14542190 gatattcattcattcaaattgatagaatacatc 14542222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 24826100 - 24826064
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24826100 aaacgatattcattcattcaaattgatagagtacatc 24826064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 31522407 - 31522371
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  31522407 aaacgatattcattcattcaaattgatagagtacatc 31522371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 38435038 - 38435002
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  38435038 aaacgatattcattcattcaaattgatagagtacatc 38435002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 42198014 - 42197978
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  42198014 aaacgatattcattcattcaaattgatagagtacatc 42197978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 45350730 - 45350766
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  45350730 aaacgatattcattcattcaaattgatagagtacatc 45350766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 45360209 - 45360245
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  45360209 aaacgatattcattcattcaaattgatagagtacatc 45360245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 47320205 - 47320253
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| |||||  |||||| ||||||||||| ||||||||||||||||    
T  47320205 acaaaaacaaaattatattcattcattcaaatcgatagaatacatcaga 47320253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 48257433 - 48257473
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||||||||| ||||||||||| |||||| ||||||||||    
T  48257433 aaacgatattcattcattcaaatcgatagagtacatcagat 48257473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 8868118 - 8868012
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| || || |||||||||||    
T  8868118 acaaaagcaaaacgacattcattcattcaaattgatagaatacatcagatacaataacatgatcaacattgctaaaaacgtaaaaggtgaatttgcgaac 8868019  T
Q  179 aatctca 185  Q
    || ||||    
T  8868018 aaactca 8868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 14585974 - 14585869
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |  || ||| ||||||||| |||| ||||     
T  14585974 gatattcattcattcaaattgatagaatacatcagagataataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcac 14585875  T
Q  192 ccaagt 197  Q
    ||||||    
T  14585874 ccaagt 14585869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 18890491 - 18890596
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| | |  || ||| ||||||||| |||| ||||     
T  18890491 gatattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacggatagggtgaatctgcgaacaaactcacagcac 18890590  T
Q  192 ccaagt 197  Q
    ||||||    
T  18890591 ccaagt 18890596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 41896812 - 41896721
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |  || ||| ||||||||| ||||    
T  41896812 atattcattcattcaaattgatagaatacatcaga-gcaataacatgatcaatattgctaaaaacgtatagggtgaatctgcgaacaaactca 41896721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 42046518 - 42046425
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| ||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  42046518 gatattcattcattcaaatcgatagaatacatcagtgacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactca 42046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 43833777 - 43833893
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaa 180  Q
    |||||||| ||||||||| | || ||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||| |  || ||| ||| |||||    
T  43833777 aaaagcaagacgatattcatccaatcaaattgatagaatacatcaaagacaataacatgatcaatatcgctaaaaaagtaaatggtgaatctgcaaacaa 43833876  T
Q  181 tctcaaagcatccaagt 197  Q
     |||| |||| ||||||    
T  43833877 actcacagcacccaagt 43833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 34610146 - 34610067
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacg 158  Q
    |||||| ||||||||||||  |||||||||||||||| |||||||||||| ||||||||| || ||||| ||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgatataatacatcagatacaataacatcattaatattgctaaaaacg 34610067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 18846251 - 18846328
Alignment:
Q  82 aaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgt 159  Q
    |||| |||||||||||| |||||| || |||||| |||||||||||| ||||||| ||||||| ||| ||||||||||    
T  18846251 aaagaaaaacgatattcattcatttaatttgatataatacatcagatacaataacttgatcaacatcactaaaaacgt 18846328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 40618863 - 40618912
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  40618863 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcagat 40618912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 19443851 - 19443919
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaa 155  Q
    |||||||||||| |||||||||||||||||| ||||||||||  ||||||||| |||| |||| |||||    
T  19443851 aaaacgatattcattcattcaaattgatagagtacatcagatataataacatgttcaacatcgttaaaa 19443919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 470937 - 471021
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgc------aataacatgatcaatatcgctaaaaac 157  Q
    |||||| |||||| |||||| |||||| |||||||||||||||||||||| |      |||||||||||||| ||||||||||||    
T  470937 acaaaaacaaaacaatattcattcatttaaattgatagaatacatcagatacaataataataacatgatcaacatcgctaaaaac 471021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 23230942 - 23230893
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  23230942 acaaaagcaaaacgatattcattcattcaaatcgatagagtacatcagat 23230893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 24099047 - 24099095
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  24099047 acaaaaacaaaacgatattcattcattcaaattgacagaatacatcaga 24099095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 21238086 - 21238040
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||    
T  21238086 acaaaaacaaaacaatattcattcattcaaattgatagaatacatca 21238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 33299163 - 33299117
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||| |||||||||||||||||||    
T  33299163 acaaaaacaaaacgatattctttcatttaaattgatagaatacatca 33299117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 34493312 - 34493234
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||| |||||||||||| ||| |||||||||||| |||  |||| || ||| |||||||| || ||||||||||||    
T  34493312 acaaaaggaaaacgatattcattctttcaaattgataaaatgtatcacatacaacaacatgattaacatcgctaaaaac 34493234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 9637199 - 9637248
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagat 9637248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 1236488 - 1236536
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||| ||||||| ||||||||||| ||||||||||||||||    
T  1236488 acaaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 1236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 3240680 - 3240636
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||    
T  3240680 acaaaaacaaaacgatgttcattcattcaaattgatagaatacat 3240636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 40211091 - 40211139
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 40211139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 3673740 - 3673697
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaataca 122  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  3673740 acaaaaacaaaacgatattcattcattcaaattgatataataca 3673697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 17693403 - 17693449
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||| ||||||||||||| |||||||    
T  17693403 acaaaaacaaaacgatattcattcactcaaattgatagagtacatca 17693449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 20227075 - 20227145
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||||||||| ||| |||||||||||||| | ||| |||| |||| ||||| |||  ||||||||||||    
T  20227075 aaaacgatattcattcgttcaaattgatagagtgcattagatacaatcacatgttcagcatcgctaaaaac 20227145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 30568111 - 30568157
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||| ||||||| |||||||||||||||||| |||||||    
T  30568111 acaaaaacaaaatgatattcattcattcaaattgatagattacatca 30568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 39657664 - 39657634
Alignment:
Q  92 gatattcgttcattcaaattgatagaataca 122  Q
    |||||||||||||||||||||||||||||||    
T  39657664 gatattcgttcattcaaattgatagaataca 39657634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 7883031 - 7883080
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||  ||||| ||||||||||    
T  7883031 acaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagat 7883080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 28086602 - 28086651
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| || ||||||||||||| | ||||||||||    
T  28086602 acaaaaacaaaacgatattcatttattcaaattgatatagtacatcagat 28086651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 41060042 - 41060123
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaatt-gatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||| ||||||||||||| |||||| ||||| |||| | |  ||||||| |||||||||| |||| ||| |||||||||||    
T  41060042 caaaaacaaaacgatattctttcatttaaatttgataaagtgtatcagatacaataacatgttcaacatcactaaaaacgta 41060123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 41362194 - 41362157
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  41362194 aaacgatattcattcattcaaattgatagagtacatca 41362157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 1809906 - 1809942
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  1809906 aaacgatattcattcattcaaattgatagagtacatc 1809942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 2234138 - 2234174
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2234138 aaacgatattcattcattcaaattgatagagtacatc 2234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 2968976 - 2968940
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2968976 aaacgatattcattcattcaaattgatagagtacatc 2968940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 8054486 - 8054518
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||| |||||||||||||||||||||||||    
T  8054486 gatattcattcattcaaattgatagaatacatc 8054518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 9502029 - 9501993
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  9502029 aaacgatattcattcattcaaattgatagagtacatc 9501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 15344600 - 15344560
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  15344600 aaaatgatatttattcattcaaattgatagaatacatcaga 15344560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 15433665 - 15433625
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  15433665 aaaatgatatttattcattcaaattgatagaatacatcaga 15433625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 15524969 - 15524929
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  15524969 aaaatgatatttattcattcaaattgatagaatacatcaga 15524929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 24790838 - 24790874
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24790838 aaacgatattcattcattcaaattgatagagtacatc 24790874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 31202909 - 31202873
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  31202909 aaacgatattcattcattcaaattgatagagtacatc 31202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 45445602 - 45445650
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||| ||||||||||||| ||||||||||| ||| || ||||||||||    
T  45445602 caaaaacaaaacgatattcattcattcaaatcgatggattacatcagat 45445650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 53508529 - 53508451
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||||||||| ||||||| |||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53508529 acaaaagcaaaatgatattcattcatttaatttgatagaatacatcagatacaataacatgatcaatatcgctaaaaac 53508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 8915006 - 8914913
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| || || ||| ||||||||| ||||    
T  8915006 gatattcattcattcaaattgatagaatacatcagagacaataacatcatcaatatcgctaaaaacgtataaggtgaatctgcgaacaaactca 8914913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 16235712 - 16235615
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| |  |||||| ||||||||| |||| | |||||||||    
T  16235712 ttcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtatagggtaaatctgcgaacaaactcacaccatccaagt 16235615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 21289608 - 21289713
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| |||| ||||     
T  21289608 gatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcac 21289707  T
Q  192 ccaagt 197  Q
    ||||||    
T  21289708 ccaagt 21289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 41818522 - 41818445
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||| || ||||||||||||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgatagaatacatcagagataataacatcattaatatcgctaaaaa 41818445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 27706020 - 27706088
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  27706020 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcgatatcgctaaaaacgta 27706088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 27856458 - 27856354
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatc 192  Q
    |||| |||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||| ||  | ||| ||||||||| |||| | ||||    
T  27856458 atatccgttcattcaaattgataaaacacatcagacacaataacatgatcaatatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatc 27856359  T
Q  193 caagt 197  Q
    |||||    
T  27856358 caagt 27856354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 51924021 - 51923953
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  51924021 gatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaacgta 51923953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 42461040 - 42460950
Alignment:
Q  95 attcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||| ||| |  || ||| ||||||||| ||||    
T  42461040 attcattcattcaaattgacagaatacatcagagacaataacatgatcaatatcgctataaatgtaaagggtgaatctgcgaacaaactca 42460950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 55061820 - 55061754
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaat 145  Q
    |||||| ||||||||||||| ||| |||||  |||||||||||||||||| ||||||||||||||||    
T  55061820 acaaaaacaaaacgatattcattcgttcaacctgatagaatacatcagatacaataacatgatcaat 55061754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 3085085 - 3085161
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||| ||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| |||  || |||||||||    
T  3085085 aaaaacaaaatgatattcattcattcaaattgatagaatacttcagatacaataacatggtcatcattgctaaaaac 3085161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 7546910 - 7546842
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| || ||||||||||||| ||||||||| |  |||| ||||||||||||||||||||||||||    
T  7546910 gatattcatttattcaaattgataaaatacatcaaagacaatgacatgatcaatatcgctaaaaacgta 7546842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 48200086 - 48199982
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    ||||||| |||||||||||| |||||| ||||||| ||  ||||  |||| |||||||||| |||| ||||||||||||||| |  || |||||||||||    
T  48200086 acaaaagaaaaacgatattcattcatttaaattgagag--tacagaagatacaataacatgttcaacatcgctaaaaacgtaaagggtgaatttgcgaac 48199989  T
Q  179 aatctca 185  Q
    || ||||    
T  48199988 aaactca 48199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 52115812 - 52115879
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| || |||||||||||||||||||||| ||  ||||||||||||  |||||||||||||||||    
T  52115812 atattcatttattcaaattgatagaatacatcggagacaataacatgattgatatcgctaaaaacgta 52115879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 26715914 - 26715980
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaat 145  Q
    |||||| |||||| ||||||| |||||||||||||||||| ||||||| | |||||| |||||||||    
T  26715914 acaaaaacaaaacaatattcggtcattcaaattgatagaacacatcagttacaataatatgatcaat 26715980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 32246718 - 32246650
Alignment:
Q  81 aaaagcaaaacgatattcgttcatt--caaattgatagaatacatcagatgcaataacatgatcaatat 147  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||||||||    
T  32246718 aaaagtaaaacgatattcattcattttcaaattgatagaatacatcatgtacaataacatgatcaatat 32246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 46304313 - 46304362
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagat 46304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 14859791 - 14859735
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataa 135  Q
    |||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgatagaatacatcagatacaataa 14859735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 50194128 - 50194176
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  50194128 acaaaagcaaaatgatattcattcattcaaattgatataatacatcaga 50194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 628716 - 628762
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  628716 acaaaaacaaaatgatattcattcattcaaattgatagaatacatca 628762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 35175691 - 35175653
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35175691 aaaacgatattcattcattcaaattgatagaatacatca 35175653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 35864761 - 35864799
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35864761 aaaacgatattcgttcattcaaattgatagagtacatca 35864799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 20464757 - 20464806
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| |||||||||||||||||| ||||||||||    
T  20464757 acaaaaacaaaatgatattcattcattcaaattgatagagtacatcagat 20464806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 32460855 - 32460806
Alignment:
Q  131 aataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaa 180  Q
    |||||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  32460855 aataacatgatcaatatcactaaaaatgtaaaaggtaaatttgcgaacaa 32460806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 43017184 - 43017135
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  43017184 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 43017135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 23799740 - 23799784
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagtacat 23799784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 38142813 - 38142714
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatca--atatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    |||||||||||||||||||||||| |||| || ||| |||||||  ||||||||||||| ||| |  || ||| ||| ||||| |||| ||||| |||||    
T  38142813 ttcattcaaattgatagaatacattagatacagtaaaatgatcagcatatcgctaaaaatgtaaagggtgaatatgcaaacaaactcacagcattcaagt 38142714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 37041062 - 37041015
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||| ||||||||||||| |||||||| ||||||||| ||||||||||    
T  37041062 aaaaacaaaacgatattcattcattcagattgatagagtacatcagat 37041015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 45568239 - 45568286
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  45568239 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 45568286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 24396291 - 24396337
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| || ||||||||||||||| |||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacatca 24396337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 32881159 - 32881197
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  32881159 aaaatgatattcattcattcaaattgatagaatacatca 32881197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 52922909 - 52922955
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  52922909 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 52922955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 6954488 - 6954537
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||| ||||||    
T  6954488 acaaaaacaaaacgatattcattcattcaaatcgatagagtacttcagat 6954537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 9797326 - 9797375
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||| | ||||||||||    
T  9797326 acaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagat 9797375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 12946768 - 12946805
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatc 124  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  12946768 aaaacgatattcattcattcaaattgatggaatacatc 12946805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 14585923 - 14585886
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  14585923 aaacgatattcattcattcaaattgatagagtacatca 14585886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 19645651 - 19645614
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  19645651 aaacgatattcattcattcaaattgatagagtacatca 19645614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 21313332 - 21313283
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||||||| || || |||||||    
T  21313332 acaaaaacaaaacgatattcattcattcaaattgattgagtatatcagat 21313283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 21533601 - 21533650
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  21533601 acaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagat 21533650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 25460787 - 25460844
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||| ||||||| || ||||||||||||||| || |||| ||||||||||||| ||||    
T  25460787 aaaatgatattcatttattcaaattgatagactatatcaaatgcaataacatgttcaa 25460844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 36910566 - 36910607
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  36910566 aaaacgatattcattcattcaaatcgatagagtacatcagat 36910607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 40487621 - 40487572
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| || |||||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagat 40487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 47041840 - 47041889
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  47041840 acaaaaacaaaatgatattcattcattcaaatagatagattacatcagat 47041889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 50981134 - 50981171
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  50981134 aaacgatattcattcattcaaattgatagagtacatca 50981171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 51084268 - 51084305
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  51084268 aaacgatattcattcattcaaattgatagagtacatca 51084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 51487381 - 51487308
Alignment:
Q  92 gatattcgttcattcaaattgatag-----aatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| |||||||||||||||||     ||||||| |||   ||||||||||| ||||||||||||||||||    
T  51487381 gatattcattcattcaaattgataggatagaatacattagagataataacatgattaatatcgctaaaaacgta 51487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 1074562 - 1074598
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  1074562 aaacgatattcattcattcaaattgatagagtacatc 1074598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 2192539 - 2192503
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2192539 aaacgatattcattcattcaaattgatagagtacatc 2192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 7448715 - 7448755
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||||||||| |||||||||||||||||| |||| |||||    
T  7448715 aaacgatattcattcattcaaattgatagagtacaacagat 7448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 7456857 - 7456897
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||||||||| |||||||||||||||||| |||| |||||    
T  7456857 aaacgatattcattcattcaaattgatagagtacaacagat 7456897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 11819545 - 11819509
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  11819545 aaacgatattcattcattcaaattgatagagtacatc 11819509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 13701670 - 13701706
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  13701670 aaacgatattcattcattcaaattgatagagtacatc 13701706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 24483364 - 24483400
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24483364 aaacgatattcattcattcaaattgatagagtacatc 24483400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 32080431 - 32080467
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  32080431 aaacgatattctttcattcaaattgatagagtacatc 32080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 47896447 - 47896403
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||| ||||||||||||| || ||||||||||||||| |||||    
T  47896447 acaaaaacaaaacgatattcattgattcaaattgatagagtacat 47896403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 48401553 - 48401517
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  48401553 aaacgatattcattcattcaaattgatagagtacatc 48401517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 48650527 - 48650575
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagat 48650575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 49627772 - 49627808
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  49627772 aaacgatattcattcattcaaattgatagagtacatc 49627808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 54149278 - 54149238
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||||||||| ||||||||||| |||||| ||||||||||    
T  54149278 aaacgatattcattcattcaaatcgatagagtacatcagat 54149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 54706400 - 54706436
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  54706400 aaacgatattcattcattcaaattgatagagtacatc 54706436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 55090367 - 55090403
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  55090367 aaacgatattcattcattcaaattgatagagtacatc 55090403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 4454 - 4373
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||||  |||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  4454 acaaaagcaaaataatattcattcattcaaattgataaaatacatcagatacaataacatcatcaatatcgctaaaaacgta 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 11344119 - 11344038
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaataacatgatcaacatcgctaaaaacgta 11344038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 25068367 - 25068286
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  25068367 acaaaagcaatacgatattcattctttcaaattgatagaatacatcagaaacaataacatcatcaatatcgctaaaaacgta 25068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 46822532 - 46822642
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaa 186  Q
    ||||| |||| | |||||||||||||||||||| ||| |||| ||||||||||||||| ||||||| ||||||| ||||| ||| ||||||||| ||||     
T  46822532 aaaacaatatccattcattcaaattgatagaatgcattagatacaataacatgatcaacatcgctacaaacgtaaaaagtgaatatgcgaacaaactcac 46822631  T
Q  187 agcatccaagt 197  Q
    | |||||||||    
T  46822632 aacatccaagt 46822642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 35133244 - 35133151
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| |  || ||| ||||||||| ||||    
T  35133244 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgttaaaaacgtatagggtgaatctgcgaacaaactca 35133151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 48931004 - 48930936
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  48931004 gatattcattcatttaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgta 48930936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 3876033 - 3876114
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||| ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||  ||||||||||    
T  3876033 acaaaaacaaaatgatattctttcgttcaaattgatagaatacatcaaatacaataacatgatcaatatcattaaaaacgta 3876114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 46821533 - 46821614
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||||||||||| |||||| ||||| |||||||| |||| |||||||||||||||||| |||| ||||||||||    
T  46821533 acaaaaacaaaacgatattcattcatttaaattaatagaatatatcatatgcaataacatgatcaacatcgttaaaaacgta 46821614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 38880405 - 38880489
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaa 163  Q
    |||||| ||||||||| ||| || |||||||||| |||||||||||||||  ||||||||||||||||||||||| ||| |||||    
T  38880405 acaaaaacaaaacgatgttcatttattcaaattgttagaatacatcagatataataacatgatcaatatcgctaataacttacaa 38880489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 11654110 - 11654043
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaata 146  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||| |||||||    
T  11654110 acaaaagcaaaacaatattcattcattcaaattgatagaatacatcaaatacaataacatcatcaata 11654043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 24069182 - 24069263
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||||||||||| || |||||||| |||||||||| ||||||  |||||||| ||||| |||||||||||||||    
T  24069182 acaaaaacaaaacgatattcattgattcaaatcgatagaatacctcagataaaataacataatcaacatcgctaaaaacgta 24069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 31481887 - 31481944
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  31481887 aaaacgatattcattcattcaaattgatagaatacatcatatacaataacatgatcaa 31481944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 4999810 - 4999888
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||| ||||||||||||| |||||||||||| ||| |||| ||||||| ||||||||| ||||| |||| |||||||    
T  4999810 acaaaaacaaaacgatattcattcattcaaattaatataatatatcagatacaataacatcatcaacatcgataaaaac 4999888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 28476520 - 28476455
Alignment:
Q  95 attcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||| |||||||| |||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  28476520 attcattcattcatattgatagaatacatcagagataataacatgatcaatattgctaaaaacgta 28476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 41553228 - 41553276
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  41553228 acaaaaacaaaacgatattcattcattcaaattaatagaatacatcaga 41553276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 2407886 - 2407844
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaata 134  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  2407886 gatattcattcatttaaattgatagaatacatcagatgcaata 2407844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 17611693 - 17611647
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  17611693 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 17611647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 9977002 - 9977051
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  9977002 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagat 9977051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 12141099 - 12141148
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 12141148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 28044548 - 28044597
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  28044548 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 28044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 25255521 - 25255456
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| |||||||||||||| ||  ||||||| ||  ||||||||| ||||||||||||||||||||    
T  25255521 atattcattcattcaaattgagag--tacatcaaatataataacatgttcaatatcgctaaaaacgta 25255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 28407712 - 28407756
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||    
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatca 28407756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 14046504 - 14046575
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacg 158  Q
    |||| ||||||  |||||||||||||||| |||  |||| ||||||||||||||||||  | ||||||||||    
T  14046504 aaaatgatatttcttcattcaaattgataaaatgtatcatatgcaataacatgatcaacgttgctaaaaacg 14046575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 14356534 - 14356605
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacg 158  Q
    |||| ||||||  |||||||||||||||| |||  |||| ||||||||||||||||||  | ||||||||||    
T  14356534 aaaatgatatttcttcattcaaattgataaaatgtatcatatgcaataacatgatcaacgttgctaaaaacg 14356605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 48061721 - 48061674
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcag 126  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcag 48061674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 44311588 - 44311658
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||||||||| ||| |||||||||||||| | ||| |||| |||| ||||| |||  ||||||||||||    
T  44311588 aaaacgatattcattcgttcaaattgatagagtgcattagatacaatcacatgttcagcatcgctaaaaac 44311658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 25286988 - 25287029
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||  |||||||||||||||||| ||||||||||    
T  25286988 aaaacgatatttattcattcaaattgatagagtacatcagat 25287029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 2623053 - 2623017
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2623053 aaacgatattcattcattcaaattgatagagtacatc 2623017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 3222897 - 3222945
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||| ||||||| |||||| ||||||||| |||||||||||    
T  3222897 acaaaaacaaaatgatattcattcatttaaattgatataatacatcaga 3222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 4621040 - 4621076
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4621040 aaacgatattcattcattcaaattgatagagtacatc 4621076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 11833479 - 11833443
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  11833479 aaacgatattcattcattcaaattgatagagtacatc 11833443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 21603918 - 21603882
Alignment:
Q  89 aacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||||||| |||||||||||||||||| |||||||    
T  21603918 aacgatattcattcattcaaattgatagagtacatca 21603882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 21991123 - 21991087
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  21991123 aaacgatattcattcattcaaattgatagagtacatc 21991087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 25854886 - 25854922
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  25854886 aaacgatattcattcattcaaattgatagagtacatc 25854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 31235607 - 31235663
Alignment:
Q  141 tcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    |||||||||||||||||||| | | | |||||| |||||| |||| |||||||||||    
T  31235607 tcaatatcgctaaaaacgtaaagaatgaatttgtgaacaaactcacagcatccaagt 31235663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 37837259 - 37837299
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||||||||| ||||||||||| |||||| ||||||||||    
T  37837259 aaacgatattcattcattcaaatcgatagagtacatcagat 37837299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 41288417 - 41288381
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  41288417 aaacgatattctttcattcaaattgatagagtacatc 41288381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 44482538 - 44482574
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  44482538 aaacgatattcattcattcaaattgatagagtacatc 44482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 48643486 - 48643522
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  48643486 aaacgatattcattcattcaaattgatagagtacatc 48643522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 8103022 - 8102917
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||| || || ||| ||| ||||| |||| ||||     
T  8103022 gatattcattcattcatattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtaaaaggtgaatctgcaaacaaactcacagcac 8102923  T
Q  192 ccaagt 197  Q
    ||||||    
T  8102922 ccaagt 8102917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 14802123 - 14802018
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgt-acaaagtaaatttgcgaacaatctcaaagcat 191  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||| | | ||| ||| ||||||||| |||| |||||    
T  14802123 atattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacgtaatagagtgaatctgcgaacaaactcacagcat 14802024  T
Q  192 ccaagt 197  Q
    ||||||    
T  14802023 ccaagt 14802018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 31851673 - 31851751
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    |||||| |||||  |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  31851673 acaaaaacaaaataatattcattcattcaaattgatagaatacatcagatgcaataacaagatcaacatcgctaaaaac 31851751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 30776959 - 30776866
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| |||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  30776959 gatattcattcattcatattgatagaatacgtcagagacaataacatgatcaatatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 30776866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 546319 - 546222
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||| |   | ||| ||||||||| |||| |||| ||||||    
T  546319 ttcattcaaattgatagaatatatcagacacaatgacatgatcaatatcgctaaaaacgtataggatgaatctgcgaacaaactcacagcacccaagt 546222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 679396 - 679336
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||    
T  679396 ttcattcaaattgatagaatacatcagatacaataacataatcaacattgctaaaaacgta 679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 31297117 - 31297069
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 31297069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 22571691 - 22571628
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcg 149  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||  ||||||| ||||    
T  22571691 caaagcgatattcgttcattcaaattgatagaatacatcagatataataagttgatcaaaatcg 22571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 29744533 - 29744479
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaat 133  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  29744533 acaaaggcaaaacaatattcattcattcaaattgatagaatacatcagatacaat 29744479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 10084947 - 10084998
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||||| |||||||||||||||||||||||||||||  |||||||| |||||    
T  10084947 atattcattcattcaaattgatagaatacatcagatagaataacatcatcaa 10084998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 127955 - 127913
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatg 129  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  127955 aaaacgatatttgttcattcaaattgatagagtacatcagatg 127913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 33052960 - 33053006
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  33052960 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 33053006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 12170766 - 12170717
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 12170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 32327012 - 32327061
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  32327012 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 32327061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 1523699 - 1523631
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||| |||||||| |||| ||||||||||||||   ||||| ||||||||||| ||| ||||||||    
T  1523699 gatattcattcattcatattggtagaatacatcagagaaaataatatgatcaatattgctgaaaacgta 1523631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 7975989 - 7976028
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  7975989 aaacgatattcattcatttaaattgatagaatacatcaga 7976028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 27097445 - 27097524
Alignment:
Q  101 tcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaa 180  Q
    ||||||||||| ||||||||  | |||| |||||||| |||||| |||| |||||||||| || || |||||| ||||||    
T  27097445 tcattcaaatttatagaatatcttagatacaataacacgatcaacatcgttaaaaacgtaaaatgtgaatttgtgaacaa 27097524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 31936293 - 31936328
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||||||||||||||||||||||||||| |||||    
T  31936293 aaacgatattcgttcattcaaattgatagagtacat 31936328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 606502 - 606453
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  606502 acaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagat 606453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 3913374 - 3913415
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  3913374 aaaacgatattcattcattcaaatcgatagagtacatcagat 3913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 7514995 - 7515044
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| | ||||||||    
T  7514995 acaaaaacaaaacgatattcattcattcaaatcgatagagtgcatcagat 7515044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 9341443 - 9341492
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| |||||||||| || ||||||||||| |||||| ||||||||||    
T  9341443 acaaaaacaaaacgatactcattcattcaaatcgatagagtacatcagat 9341492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 9380332 - 9380215
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    ||||||| ||| | ||||||  ||||||||||||||| |||| |||| || | ||||||||||||| || | |||||| ||| |  || ||| |||||||    
T  9380332 acaaaagaaaaccaatattcactcattcaaattgatataatatatcaaatactataacatgatcaacattgataaaaatgtaaatggtgaatatgcgaac 9380233  T
Q  179 aatctcaaagcatccaag 196  Q
    || |||| | ||||||||    
T  9380232 aaactcacaacatccaag 9380215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 14174863 - 14174912
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||| | ||||||||||    
T  14174863 acaaaaacaaaacgatattcattcattcaaatcgatatattacatcagat 14174912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 14179399 - 14179448
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||| | ||||||||||    
T  14179399 acaaaaacaaaacgatattcattcattcaaatcgatatattacatcagat 14179448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 30894888 - 30894847
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| ||||||||||| ||| |||||||||||||    
T  30894888 aaaacgatattcattcattcaaatcgatggaatacatcagat 30894847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 32060166 - 32060125
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  32060166 aaaacgatattcattcattcaaattgatatattacatcagat 32060125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 4660889 - 4660853
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4660889 aaacgatattcattcattcaaattgatagagtacatc 4660853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 5146387 - 5146351
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  5146387 aaacgatattcattcattcaaattgatagagtacatc 5146351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 6419539 - 6419575
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  6419539 aaacgatattcattcattcaaattgatagactacatc 6419575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 11321338 - 11321382
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||| ||||||||||||  |||||||||||||||||| |||||||    
T  11321338 aaaaacaaaacgatatttattcattcaaattgatagagtacatca 11321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 12653978 - 12654014
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  12653978 aaacgatattcattcattcaaattgatagagtacatc 12654014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 15589785 - 15589821
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  15589785 aaacgatattcattcattcaaattgatagagtacatc 15589821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 19402512 - 19402548
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  19402512 aaacgatattcattcattcaaattgatagagtacatc 19402548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 23654710 - 23654674
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  23654710 aaacgatattcattcattcaaattgatagagtacatc 23654674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 28981466 - 28981426
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||||||||| | | ||||||||||||||||||||||||    
T  28981466 aaaacgatattcatacgttcaaattgatagaatacatcaga 28981426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 29920577 - 29920613
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    |||||||||||||||||||||||||||| | ||||||    
T  29920577 aaacgatattcgttcattcaaattgataaagtacatc 29920613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 30813518 - 30813482
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  30813518 aaacgatattcattcattcaaattgatagagtacatc 30813482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 10237011 - 10237104
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  10237011 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactca 10237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 3309249 - 3309145
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatc 192  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |  || ||| |||||| || |||| |||| |    
T  3309249 atattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaataaactcacagcacc 3309150  T
Q  193 caagt 197  Q
    |||||    
T  3309149 caagt 3309145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 19595681 - 19595800
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaag-taaatttgcgaa 177  Q
    ||||||| |||||||||||| | |||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||| | | || | ||||| ||| ||    
T  19595681 acaaaagtaaaacgatattcatgcattcaaattgatataatatatcagatacaataacatgatcaagatcgctaaaaaagaaaaatgataaatctgcaaa 19595780  T
Q  178 caatctcaaagcatccaagt 197  Q
    ||| |||| |||||||||||    
T  19595781 caaactcacagcatccaagt 19595800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 14416473 - 14416392
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||| ||||||  ||||||||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaataacatgttcaacatcgctaacaacgta 14416392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14955847 - 14955770
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||| ||||| ||||||| |||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  14955847 acaaaaacaaaatgatattcattcatttaaattgatagaatacataagagacaataacatgatcaatatcgctaaaaa 14955770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 3460583 - 3460523
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  3460583 ttcattcaaattgatagaatatatcagagacaataacatgatcaatatcgctaaaaacgta 3460523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 6358672 - 6358744
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||  ||||||||||    
T  6358672 aaacgatattcattcattcaaattgatggaatacatcagatacaataacttgatcaatatcattaaaaacgta 6358744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 28533738 - 28533842
Alignment:
Q  82 aaagcaaaacgatattcgttcattcaaa-ttgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaa 180  Q
    ||||||||||||||||| |  ||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||| || ||  || |||||||||    
T  28533738 aaagcaaaacgatattcatcaattcaaaattgatagaatacatcagattcaataacatgatcaacatcgttaaaaacgtaaaaggtggatctgcgaacaa 28533837  T
Q  181 tctca 185  Q
     ||||    
T  28533838 actca 28533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 3465640 - 3465575
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||| |||||| |||||||||||||| ||||||  |||||||||||||||||| |||||||||    
T  3465640 gatattcattcatttaaattgatagaatatatcagagacaataacatgatcaatattgctaaaaac 3465575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 37994590 - 37994542
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  37994590 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 37994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 37417020 - 37416962
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||||| |||||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  37417020 caaaacaatattcattcattcaaattgatggaatacattagatccaataacatgatcaa 37416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 18107553 - 18107638
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    |||||||||||||||||| ||||||| ||  ||||||||| ||| |||| ||||||||||| | ||| ||| ||||||||| ||||    
T  18107553 ttcattcaaattgatagagtacatcacatataataacatgttcattatcactaaaaacgtaaagagtgaatatgcgaacaaactca 18107638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 32448410 - 32448458
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  32448410 acaaaaacaaaatgatattcattcattcaaattgatagaatacatcaga 32448458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 32519107 - 32519061
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||    
T  32519107 aaaagcaaaacgatattcattcatttaaattaatagaatacatcaga 32519061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 37876399 - 37876445
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  37876399 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 37876445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 41694931 - 41694857
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| |||||  |||||||||||| ||| | || |||| ||||||||||||| |||| |||||||||||||||    
T  41694931 caaaacaatatttattcattcaaattaatatagtatatcatatgcaataacatgttcaacatcgctaaaaacgta 41694857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 5427662 - 5427711
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  5427662 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 5427711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 12553970 - 12554039
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||| ||||||| |||||||||||||||||| || ||||||| |||||||||  |||| || ||||||||    
T  12553970 aaaatgatattcattcattcaaattgatagagtatatcagatacaataacatattcaacattgctaaaaa 12554039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 31193129 - 31193178
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 31193178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 31788763 - 31788714
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  31788763 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 31788714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 33924012 - 33923963
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  33924012 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 33923963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 38445473 - 38445424
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 38445424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 5754743 - 5754707
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||||||||||    
T  5754743 aaacgatattcattcattcaaattgatagaatacatc 5754707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 24461738 - 24461702
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24461738 aaaacgatattcattcattcaaattgatagaatacat 24461702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 26491741 - 26491705
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26491741 aaacgatattcattcattcaaattgatagaatacatc 26491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 35220634 - 35220586
Alignment:
Q  80 caaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatcagat 35220586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 16376296 - 16376237
Alignment:
Q  82 aaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgat 141  Q
    |||||||||||| |||| |||||||||||| ||| ||||||||||||  ||||| |||||    
T  16376296 aaagcaaaacgagattcattcattcaaattaataaaatacatcagatataataatatgat 16376237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 19598155 - 19598076
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||| |||| ||||| | |||||| |||||||||||||| || ||||  |||||||||||||| || || |||||||||    
T  19598155 aaaaggaaaatgatatccattcattaaaattgatagaatatataagatataataacatgatcaacattgcaaaaaacgta 19598076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 4903938 - 4903984
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 4903984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 25508861 - 25508907
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||  |||||||||||||||||| |||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgatagagtacatca 25508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 30923250 - 30923296
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||| ||||||| |||||||||||||||||| |||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatca 30923296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 33759977 - 33760056
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| |||||  |||||| ||||||||||| || ||  ||||| |||| |||||||||| |||| |||||||||||||||    
T  33759977 acaaaaacaaaataatattcattcattcaaatcgagag--tacattagatacaataacatgttcaacatcgctaaaaacgta 33760056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 41328046 - 41328008
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgataga 117  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  41328046 acaaaaacaaaacgatattcattcattcaaattgataga 41328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 1415864 - 1415815
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| ||||||||||| |||||| ||||||||||    
T  1415864 acaaaaacaaaatgatattcattcattcaaatcgatagattacatcagat 1415815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 11985034 - 11985075
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  11985034 aaaacgatattcattcattcaaatcgatagagtacatcagat 11985075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 18763775 - 18763726
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||  ||||| ||||||||||    
T  18763775 acaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagat 18763726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 21612538 - 21612501
Alignment:
Q  86 caaaacgatattcgttcattcaaattgatagaatacat 123  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  21612538 caaaacgatatttattcattcaaattgatagaatacat 21612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 22538095 - 22538152
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||||||||||  ||||||||||||||| || || ||||||| |||||||||| ||||    
T  22538095 aaaacgatatttattcattcaaattgatggattatatcagatacaataacatgttcaa 22538152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 31908477 - 31908514
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  31908477 aaacgatattcattcattcaaattgatagagtacatca 31908514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 33585528 - 33585577
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||  ||||| ||||||||||    
T  33585528 acaaaaacaaaacgatattctttcattcaaatcaatagagtacatcagat 33585577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 36692181 - 36692132
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||| | ||||||||||| |||||| ||||||||||    
T  36692181 acaaaaacaaaacgatatacattcattcaaatcgatagagtacatcagat 36692132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 36942915 - 36942964
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||  ||||| ||||||||||    
T  36942915 acaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagat 36942964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 43696329 - 43696292
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  43696329 aaacgatattcattcattcaaattgatagagtacatca 43696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 3527447 - 3527411
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  3527447 aaacgatattcattcattcaaattgatagagtacatc 3527411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 4739790 - 4739754
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4739790 aaacgatattcattcattcaaattgatagagtacatc 4739754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 7071434 - 7071470
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacat 123  Q
    |||||||||||| |||||||||||||||||| |||||    
T  7071434 aaaacgatattcattcattcaaattgatagagtacat 7071470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 13878669 - 13878705
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  13878669 aaacgatattcattcattcaaattgatagagtacatc 13878705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 14018794 - 14018830
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14018794 aaacgatattcattcattcaaattgatagagtacatc 14018830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 16136539 - 16136503
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  16136539 aaacgatattcattcattcaaattgatagagtacatc 16136503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 20560793 - 20560829
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  20560793 aaacgatattcattcattcaaattgatagagtacatc 20560829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 25068302 - 25068266
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  25068302 aaacgatattcattcattcaaattgatagagtacatc 25068266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 28230757 - 28230793
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  28230757 aaacgatattcgttcattcaaattgttagagtacatc 28230793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 28871582 - 28871647
Alignment:
Q  89 aacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||||||| |||||||||||||  ||| |||||||||| |||||||||  |||| || ||||||||    
T  28871582 aacgatattcattcattcaaattg--agagtacatcagatacaataacattttcaacattgctaaaaa 28871647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 29543254 - 29543218
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  29543254 aaacgatattcattcattcaaattgatagagtacatc 29543218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 32015714 - 32015678
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  32015714 aaacgatattcattcattcaaattgatagagtacatc 32015678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 33012509 - 33012473
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  33012509 aaacgatattcattcattcaaattgatagagtacatc 33012473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 35333966 - 35333930
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  35333966 aaacgatattcattcattcaaattgatagagtacatc 35333930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 44942747 - 44942711
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  44942747 aaacgatattcattcattcaaattgatagagtacatc 44942711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 36775504 - 36775609
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| |||| | |||    
T  36775504 gatattcattcattcaaattgattgaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacaacat 36775603  T
Q  192 ccaagt 197  Q
    ||||||    
T  36775604 ccaagt 36775609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 48750483 - 48750390
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  48750483 gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatatgcgaacaaactca 48750390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 40163224 - 40163298
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaa 155  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| | ||||| ||||||||||    
T  40163224 aaaagcaaaacgatattcattcattcaaattgatagaatacatgagatacaataacttaatcaacatcgctaaaa 40163298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 31692248 - 31692354
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    ||||||| |||| ||||||| || ||||||||||||||||||||||| ||| |||||||||||||| |||| |||||| ||  | |||||||  ||||||    
T  31692248 acaaaagtaaaatgatattcatttattcaaattgatagaatacatcatatgtaataacatgatcaacatcgttaaaaatgttaagagtaaatacgcgaac 31692347  T
Q  179 aatctca 185  Q
    || ||||    
T  31692348 aaactca 31692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 13075437 - 13075543
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    ||||||||||||| ||| || |||||| || ||||||||||| || |||| ||||||||| ||||||||||||||||| ||| |  || ||| ||||||     
T  13075437 acaaaagcaaaacaatactcattcatttaagttgatagaatatattagatacaataacataatcaatatcgctaaaaaagtaaagggtgaatctgcgaaa 13075536  T
Q  179 aatctca 185  Q
    |||||||    
T  13075537 aatctca 13075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 47133202 - 47133154
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  47133202 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 47133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 10776253 - 10776306
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaa 132  Q
    |||||| ||||| |||||||||||||||||||||||||| || |||||||||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatcagatgcaa 10776306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 26535636 - 26535587
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  26535636 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagat 26535587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 27456789 - 27456743
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  27456789 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 27456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 34878070 - 34878120
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatg 129  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  34878070 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatg 34878120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 50616456 - 50616574
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    |||||||||||  ||||||  || ||| ||||||||| ||||||| ||||  |||||||||||||| || |||||||||||| || || ||| || || |    
T  50616456 acaaaagcaaactgatatttatttatttaaattgataaaatacattagatataataacatgatcaacattgctaaaaacgtaaaacgtgaatctgtgagc 50616555  T
Q  179 aatctcaaagcatccaagt 197  Q
    || |||| | |||||||||    
T  50616556 aaactcacaacatccaagt 50616574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 50624283 - 50624401
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    |||||||||||  ||||||  || ||| ||||||||| ||||||| ||||  |||||||||||||| || |||||||||||| || || ||| || || |    
T  50624283 acaaaagcaaactgatatttatttatttaaattgataaaatacattagatataataacatgatcaacattgctaaaaacgtaaaacgtgaatctgtgagc 50624382  T
Q  179 aatctcaaagcatccaagt 197  Q
    || |||| | |||||||||    
T  50624383 aaactcacaacatccaagt 50624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 5984116 - 5984067
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| |||||||    
T  5984116 acaaaaacaaaacgatattcattcattcaaatcgatagaatatatcagat 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 11462274 - 11462323
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 11462323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 16162127 - 16162074
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaat 145  Q
    ||||||| |||||||| |||||||||||||||||||  |||||| |||||||||    
T  16162127 gatattcattcattcatattgatagaatacatcagagacaataatatgatcaat 16162074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 21687678 - 21687629
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 21687629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 39888482 - 39888433
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||||    
T  39888482 acaaaaacaaaacgatattcattcatacaaattgatataatacatcagat 39888433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 41994751 - 41994698
Alignment:
Q  103 attcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||||||||||||| | ||||||| ||||||||||||||| ||| |||||||    
T  41994751 attcaaattgatagaaaatatcagatacaataacatgatcaaaatcactaaaaa 41994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 50377623 - 50377574
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||||||||  |||||||||||    
T  50377623 acaaaaacaaaacgatattcattcattcaaattgataagatacatcagat 50377574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 12635469 - 12635421
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| |||||| ||||||||||||| |||||||    
T  12635469 acaaaaacaaaacgatattcattcatttaaattgatagaatgcatcaga 12635421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 34412924 - 34412979
Alignment:
Q  130 caataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  34412924 caataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactca 34412979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 2351061 - 2351016
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagatgcaata 134  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||    
T  2351061 aaacaatattcgttcattcaaattgatagagtacatc-gatgcaata 2351016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 24583247 - 24583201
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||| ||||| ||||||| ||||||||||| ||||||||||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 24583443 - 24583397
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||| ||||| ||||||| ||||||||||| ||||||||||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 30712084 - 30712163
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||| ||||| ||||||| |||||||||||  |  |  ||||||| || |||||||||| ||||||||||||||||||||    
T  30712084 acaaaaacaaaatgatattcattcattcaaatcaagcg--tacatcatatacaataacatgttcaatatcgctaaaaacgta 30712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 34479715 - 34479644
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||||||||| |||||| |||||||  |||||||||||||  ||||||||  |||| ||| |||||||||||    
T  34479715 aaaacgatattcattcatttaaattga--gaatacatcagatataataacattttcaacatcactaaaaacgta 34479644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 36894200 - 36894246
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 36894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 39987724 - 39987678
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||| | |||||||    
T  39987724 acaaaaccaaaacgatattcattcattcaaattgataaattacatca 39987678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 45789841 - 45789774
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaa 156  Q
    |||||||||||| |||||| ||||||| ||  | |||||||| |||||||||| |||| |||||||||||    
T  45789841 aaaacgatattcattcatttaaattgagag--tgcatcagatacaataacatgttcaacatcgctaaaaa 45789774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 15836318 - 15836273
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatc 124  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||||    
T  15836318 acaaaagcaaaatgatatttattcattcaaattgatagattacatc 15836273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 32678936 - 32678977
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaata 120  Q
    |||||| ||||||||||||| ||||||||||||||| |||||    
T  32678936 acaaaaacaaaacgatattcattcattcaaattgatggaata 32678977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 33486695 - 33486732
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatc 124  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  33486695 aaaacgatattcattcattcaaattgatagagtacatc 33486732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 35484191 - 35484232
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  35484191 aaaacgatattcattcattcaaatcgatagagtacatcagat 35484232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 44915931 - 44915890
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||| ||||||| |||||||||||||||||| ||||||||||    
T  44915931 aaaatgatattcattcattcaaattgatagagtacatcagat 44915890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 49504387 - 49504436
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||| ||||    
T  49504387 acaaaaacaaaacgatattcattcattcaaatcgatagagtacataagat 49504436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 3233232 - 3233196
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  3233232 aaacgatattcattcattcaaattgatagattacatc 3233196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 4882037 - 4882073
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4882037 aaacgatattcattcattcaaattgatagagtacatc 4882073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 11121412 - 11121380
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||| |||||||||||||||||||||||||    
T  11121412 gatattcattcattcaaattgatagaatacatc 11121380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 13969318 - 13969350
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||| |||||||||||||||||||||||||    
T  13969318 gatattcattcattcaaattgatagaatacatc 13969350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 25032763 - 25032799
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  25032763 aaacgatattcattcattcaaattgatagagtacatc 25032799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 29205729 - 29205693
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  29205729 aaacgatattcattcattcaaattgatagagtacatc 29205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 31919292 - 31919248
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||    
T  31919292 aaaaccaaaacgaaattcattcattcaaattgatagagtacatca 31919248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 44517609 - 44517573
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  44517609 aaacgatattcattcattcaaattgatagagtacatc 44517573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 2979100 - 2979205
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| || |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |  || ||| ||||||||| |||| | |||    
T  2979100 gatattcatttattcaaattgatagaatacatcagaaacaataacatgatcaatatcgctaaaaatgtatagggtgaatctgcgaacaaactcacaacat 2979199  T
Q  192 ccaagt 197  Q
    ||||||    
T  2979200 ccaagt 2979205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 19103269 - 19103329
Alignment:
Q  100 ttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19103269 ttcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgta 19103329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 28540700 - 28540805
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcat 191  Q
    ||||||| |||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||| |  || ||| ||||||||| |||| ||||     
T  28540700 gatattcattcatttaaattgataaaatacatcaaagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactcacagcac 28540799  T
Q  192 ccaagt 197  Q
    ||||||    
T  28540800 ccaagt 28540805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 35920777 - 35920855
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaac 157  Q
    ||||||| |||| ||||||| |||| ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||    
T  35920777 acaaaaggaaaatgatattcattcaatcaaattgatataatacatcagatacaatcacatgatcaatgtcgctaaaaac 35920855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 14211521 - 14211428
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctca 185  Q
    ||||||| |||||||||||||||| ||||||||| |  ||||| ||||||||||||||||||||||||| |  || ||| ||||||||| ||||    
T  14211521 gatattcattcattcaaattgatataatacatcatagacaatagcatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactca 14211428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 39567562 - 39567496
Alignment:
Q  94 tattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||| |||||||||||||||| ||||||||| |  ||||||||||||||||||| |||||||||||    
T  39567562 tattcattcattcaaattgatataatacatcaaagacaataacatgatcaatatcactaaaaacgta 39567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 8984781 - 8984827
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8984781 acaaaaacaaaacgatattcattcattcaaattgatagaatacatca 8984827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 13007525 - 13007479
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  13007525 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 13007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 19121205 - 19121103
Alignment:
Q  93 atattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatc 192  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||||  ||| ||| || |||||||| |  || ||| ||||||||| |||| | ||||    
T  19121205 atattcattcattcaaattgataaactacatcagatacaataacatgtccaacatctctgaaaacgtaaagggtgaatctgcgaacaaactcacatcatc 19121106  T
Q  193 caa 195  Q
    |||    
T  19121105 caa 19121103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 25980450 - 25980400
Alignment:
Q  82 aaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaa 132  Q
    ||||||||||||||||| ||||||||||| |||||| || |||||||||||    
T  25980450 aaagcaaaacgatattcattcattcaaatcgatagagtatatcagatgcaa 25980400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 6011930 - 6011979
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  6011930 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 6011979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 8088005 - 8088054
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||||||||    
T  8088005 acaaaaacaaaatgatattcattcattcaaattgatagaatgcatcagat 8088054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 9113517 - 9113566
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  9113517 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 9113566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 14726253 - 14726302
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  14726253 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 14726302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 24229576 - 24229625
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagat 24229625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 38007653 - 38007604
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  38007653 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 38007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 38110799 - 38110872
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    |||||||||||  ||  |||||||||||||||||||||| || ||| ||| ||||||| ||| |||||||||||    
T  38110799 aaaacgatattaatttgttcaaattgatagaatacatcatatacaacaacgtgatcaacatcactaaaaacgta 38110872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 10332340 - 10332388
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| |||||| |||| | ||||||||||||||||||||||||||||    
T  10332340 acaaaaacaaaacaatatccattcattcaaattgatagaatacatcaga 10332388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 24874834 - 24874755
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgta 160  Q
    ||||||||||| |||||| || ||| |||||||||  |||||||| ||   |||| |||||||||||| |||||||||||    
T  24874834 aaaagcaaaacaatattcatttattaaaattgatatgatacatcatataggataatatgatcaatatccctaaaaacgta 24874755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 17325338 - 17325383
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatcagatgcaata 134  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  17325338 aaacgatattcattcattcaaattgatagattacatc-gatgcaata 17325383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 26877901 - 26877947
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  26877901 acaaaatcaaaacgatattcattcattcgaattgatagagtacatca 26877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 1409796 - 1409747
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||||||||||| || |||||||||| |||| ||||||||||    
T  1409796 acaaaaacaaaacgatattcatttattcaaattggtagagtacatcagat 1409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 15710980 - 15710947
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||| ||||||||||||||||||||||||||    
T  15710980 gatattcattcattcaaattgatagaatacatca 15710947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 16758838 - 16758781
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    |||| ||||||| |||||| ||||||||||||||||| ||||  ||||| ||||||||    
T  16758838 aaaatgatattctttcatttaaattgatagaatacataagatataataatatgatcaa 16758781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 38598085 - 38598044
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||| ||||| |||||||||||||||||| ||||||||||    
T  38598085 aaaacgttattcattcattcaaattgatagagtacatcagat 38598044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 42505073 - 42505110
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatca 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  42505073 aaacgatattcattcattcaaattgatagagtacatca 42505110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 586201 - 586165
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  586201 aaacgatattcattcattcaaattgatagagtacatc 586165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 4771150 - 4771114
Alignment:
Q  81 aaaagcaaaacgatattcgttcattcaaattgataga 117  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgataga 4771114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 17331789 - 17331753
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  17331789 aaacgatattcattcattcaaattgatagagtacatc 17331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 19259635 - 19259691
Alignment:
Q  141 tcaatatcgctaaaaacgtacaaagtaaatttgcgaacaatctcaaagcatccaagt 197  Q
    |||| ||||||||||||||| | | ||||| ||||||||| |||| |||||||||||    
T  19259635 tcaacatcgctaaaaacgtaaagaataaatctgcgaacaaactcacagcatccaagt 19259691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 23881776 - 23881812
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  23881776 aaacgatattcattcattcaaattgatagagtacatc 23881812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 33486247 - 33486279
Alignment:
Q  92 gatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||| |||||||||||||||||||||||||    
T  33486247 gatattcattcattcaaattgatagaatacatc 33486279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 34431525 - 34431489
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  34431525 aaacgatattcattcattcaaattgatagagtacatc 34431489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 39531068 - 39531104
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  39531068 aaacgatattcattcattcaaattgatagagtacatc 39531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 42396170 - 42396202
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaata 120  Q
    ||||||||||| |||||||||||||||||||||    
T  42396170 aaacgatattcattcattcaaattgatagaata 42396202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 1460 - 1565
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| || |||||||| |  || ||| |||||||    
T  1460 acaaaagcaaag-gatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcccttaaaacgtatagggtgaatctgcgaac 1558  T
Q  179 aatctca 185  Q
    || ||||    
T  1559 aaactca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 8016 - 7940
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaa 163  Q
    |||||||||||| |||||||||||||||||| ||||||| || ||||||| || | || || |||||||||||||||    
T  8016 aaaacgatattcattcattcaaattgatagagtacatcaaatacaataacttgtttaacattgctaaaaacgtacaa 7940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 93406 - 93338
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaa 155  Q
    |||| ||||||| |||||||||||||||| ||||||||||||  ||||||||||| || ||||||||||    
T  93406 aaaatgatattcattcattcaaattgataaaatacatcagataaaataacatgataaacatcgctaaaa 93338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 53193 - 53239
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatca 125  Q
    |||||| ||||||||||||| |||||||||||||||| | |||||||    
T  53193 acaaaaacaaaacgatattcattcattcaaattgatatagtacatca 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 3826 - 3944
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcagatgcaataacatgatcaatatcgctaaaaacgtacaaagtaaatttgcgaac 178  Q
    |||||||||| ||||||||| |||||||||||||||||| | |||| ||| ||||||  ||||| | ||||||||||| ||| |  |||||| ||||| |    
T  3826 acaaaagcaatacgatattcattcattcaaattgatagagttcatctgatacaataaagtgatcgacatcgctaaaaatgtaaagggtaaatctgcgatc 3925  T
Q  179 aatctcaaagcatccaagt 197  Q
    || |||  | |||||||||    
T  3926 aaactcccatcatccaagt 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 57881 - 57929
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgatagaatacatcaga 127  Q
    |||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcaga 57929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 36465 - 36503
Alignment:
Q  79 acaaaagcaaaacgatattcgttcattcaaattgataga 117  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  36465 acaaaaacaaaacgatattctttcattcaaattgataga 36503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 18891 - 18929
Alignment:
Q  106 caaattgatagaatacatcagatgcaataacatgatcaa 144  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  18891 caaatcgatagaatacatcagatacaataacatgatcaa 18929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 31074 - 31115
Alignment:
Q  87 aaaacgatattcgttcattcaaattgatagaatacatcagat 128  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  31074 aaaacgatattcattcattcaaattgatatagtacatcagat 31115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 3356 - 3320
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  3356 aaacgatattcattcattcaaattgatagagtacatc 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 3727 - 3763
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  3727 aaacgatattcattcattcaaattgatagagtacatc 3763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 35536 - 35500
Alignment:
Q  88 aaacgatattcgttcattcaaattgatagaatacatc 124  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  35536 aaacgatattcattcattcaaattgatagagtacatc 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University