View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10564_3 (Length: 612)
Name: NF10564_3
Description: NF10564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10564_3 |
 | |
|
| [»] chr6 (13 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 553; Significance: 0; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 1 - 612
Target Start/End: Original strand, 11002406 - 11003014
Alignment:
| Q |
1 |
gacctttgattacatcttcttatggaggagatgaaaatgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11002406 |
gacctttgattacatcttcttatggaggagatgaaaatgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaag |
11002505 |
T |
|
| Q |
101 |
catggggagattttctaaggctcagttgaatgagatagctattggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11002506 |
catggggagattttctaaggctcagttgaatgagatagctattggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttg |
11002605 |
T |
|
| Q |
201 |
gaggaacttagtttggatgacttgttgccagaagggtttttggagaggacgaaggaaaagggaatggtagtgagaaattgggcaccacaagatgcaatat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11002606 |
gaggaacttagtttggatgacttgttgccagaagggtttttggagaggacgaaggaaaagggaatggtggtgagaaattgggcaccacaagatgcaatat |
11002705 |
T |
|
| Q |
301 |
tgagtcacgaatcagttggtggattcgtgactcattgtggatggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggccttt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
11002706 |
tgagtcacgaatcagttggtggattcgtgactcactgtggatggaactcagtgttggaagctatttgtgaaggagtgcctatgattgca---tggccttt |
11002802 |
T |
|
| Q |
401 |
gtatgcagaacaaaggttgaacaaaatgattttggttgaggaaatgaaggtggctttggaactaaatgggtcnnnnnnngggtttgtgagtggaaatgag |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11002803 |
gtatgcagaacaaaggttgaacaaaatgattttggttgaggaaatgaaggtggctttggaactaaatgggtcaaaaaaagggtttgtgagtggaaatgag |
11002902 |
T |
|
| Q |
501 |
ttgggggagagagttaaggagttgatggaatcagaaaaagggaaagagattagagagacaattttgaagatgaaaataagtgctaaggaggcaaaaggag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11002903 |
ttgggggagagagttaaggagttgatggaatcagaaaaagggaaagagattagagagacaattttgaagatgaaaacaagtgctaaggaggcaaaaggag |
11003002 |
T |
|
| Q |
601 |
gaggtggatctt |
612 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11003003 |
gaggtggatctt |
11003014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 29 - 612
Target Start/End: Original strand, 11079575 - 11080155
Alignment:
| Q |
29 |
agatgaaaatgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaagcatggggagattttctaaggctcagttg |
128 |
Q |
| |
|
|||| ||| ||||||||||| |||||| || || || || ||||||||||||| || ||||| ||||||||| | |||||||||||||||||||| | |
|
|
| T |
11079575 |
agataaaagtgggtgtttgagttggctcgattcacagccaggtcaaagcgtcgttttgttgagctttggaagcttagggagattttctaaggctcaaatt |
11079674 |
T |
|
| Q |
129 |
aatgagatagctattggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttggaggaacttagtttggatgacttgttgc |
228 |
Q |
| |
|
||| ||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| | | ||||||||| ||||||||||| ||||||| |
|
|
| T |
11079675 |
aatcagatagctattggtttggaaaaaagtgaacaaagattcttgtggattgttaggagcgatatggagtcggaggaactaagtttggatgagttgttgc |
11079774 |
T |
|
| Q |
229 |
cagaagggtttttggagaggacgaaggaaaagggaatggtagtgagaaattgggcaccacaagatgcaatattgagtcacgaatcagttggtggattcgt |
328 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| | ||||| | || || ||||||||||| ||||| |
|
|
| T |
11079775 |
cagaagggtttttggagaggacaaaggagaagggaatggttgttagaaactgggcaccacaaggttcaatactaagacatagctcagttggtgggttcgt |
11079874 |
T |
|
| Q |
329 |
gactcattgtggatggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggcctttgtatgcagaacaaaggttgaacaaaatg |
428 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||| |||||||| || ||||| | ||||| | || || || || | | |||| | | || |
|
|
| T |
11079875 |
gactcattgtggatggaactccgtgttggaagctatttgcgaaggagttccaatgat---aacgtggccactttacgcggagcagaagatgaatagattg |
11079971 |
T |
|
| Q |
429 |
attttggttgaggaaatgaaggtggctttggaactaaatgggtcnnnnnnngggtttgtgagtggaaatgagttgggggagagagttaaggagttgatgg |
528 |
Q |
| |
|
|||||||| | ||| ||| |||||||||||| | |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
11079972 |
attttggtgcaagaatggaaagtggctttggaattgaatgagtcaaaagatgggtttgtgagtgaaaatgagttgggggagagagttaaggagttgatgg |
11080071 |
T |
|
| Q |
529 |
aatcagaaaaagggaaagagattagagagacaattttgaagatgaaaataagtgctaaggaggcaaaaggaggaggtggatctt |
612 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
11080072 |
aatcagaaaaggggaaagaggttagagagacaattttgaagatgaaaataagtgctaaggaagcaagaggaggaggtggatctt |
11080155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 608
Target Start/End: Original strand, 10968226 - 10968830
Alignment:
| Q |
1 |
gacctttgattacatcttcttatggaggagatgaaaatgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaag |
100 |
Q |
| |
|
|||| |||||||| |||||||||||| ||||||||||| |||| | | |||||| || |||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
10968226 |
gaccattgattaccgcttcttatggagaagatgaaaatgagtgtctaagttggctcgagtcgcaatctagtcaaagcgtcgtgttgttaagttttggaag |
10968325 |
T |
|
| Q |
101 |
catggggagattttctaaggctcagttgaatgagatagctattggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttg |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||| |||| ||||| |||| |||| |
|
|
| T |
10968326 |
catgggaagattttctaaggctcagttgaatgagatagcacttggattggaaataagtgagcaaagattcttgtgggttgttaggagtgagttggactta |
10968425 |
T |
|
| Q |
201 |
gaggaacttagtttggatgacttgttgccagaagggtttttggagaggacgaaggaaaagggaatggtagtgagaaattgggcaccacaagatgcaatat |
300 |
Q |
| |
|
||||| | |||||||| || ||| | || |||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||| |||||||| |
|
|
| T |
10968426 |
gaggagcaaagtttggacgagttgcttcctgaagggtttttggagaggacaaagcaaaagggaatggtggcaagaaattgggcaccacaaggtgcaatat |
10968525 |
T |
|
| Q |
301 |
tgagtcacgaatcagttggtggattcgtgactcattgtggatggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggccttt |
400 |
Q |
| |
|
| | || || || |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||| || |
|
|
| T |
10968526 |
taaagcatgactcgattggtggattcgtgacacattgtggatggaactcggtgttggaagctatttgtgaaggagtgcctatg---gtggcgtggccatt |
10968622 |
T |
|
| Q |
401 |
gtatgcagaacaaaggttgaacaaaatgattttggttgaggaaatgaaggtggctttggaactaaatgggtcnnnnnnngggtttgtgagtggaaatgag |
500 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||| || |||||||| ||||||||||| || | || |||||||||||||||| ||| |
|
|
| T |
10968623 |
atatgcagaacaaaggctgaacaaggtgattttggttgacgagatgaaggttgctttggaactgaaggattcaaaagacgggtttgtgagtggaaccgag |
10968722 |
T |
|
| Q |
501 |
ttgggggagagagttaaggagttgatggaatcagaaaaagggaaagagattagagagacaattttgaagatgaaaataagtgctaaggaggcaaaaggag |
600 |
Q |
| |
|
|| ||||| || ||||||| || ||||| || || ||||||||||||||||| | | ||||| |||||||||||||||||||| ||||||| || || |
|
|
| T |
10968723 |
ttaggggatcgaattaaggaattaatggactccgataaagggaaagagattaggaaaattattttcaagatgaaaataagtgctaaagaggcaagagaag |
10968822 |
T |
|
| Q |
601 |
gaggtgga |
608 |
Q |
| |
|
||||||| |
|
|
| T |
10968823 |
aaggtgga |
10968830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 608
Target Start/End: Original strand, 10982176 - 10982780
Alignment:
| Q |
1 |
gacctttgattacatcttcttatggaggagatgaaaatgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaag |
100 |
Q |
| |
|
|||||||||| ||||||| ||||||| |||||||||||||||| | | ||||||||| |||||||||| ||||||||||||||| || ||||||||||| |
|
|
| T |
10982176 |
gacctttgatcgcatcttcatatggagaagatgaaaatgggtgtctaagttggcttgagtcgcaacctattcaaagcgtcgtgttgttaagttttggaag |
10982275 |
T |
|
| Q |
101 |
catggggagattttctaaggctcagttgaatgagatagctattggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttg |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| || | |||||||||| | || |
|
|
| T |
10982276 |
catgggaagattttctaaggctcagttgaatgagatagcacttggattggaaaaaagtgagcaaagattcttgtgggttattaggagcgagttggattta |
10982375 |
T |
|
| Q |
201 |
gaggaacttagtttggatgacttgttgccagaagggtttttggagaggacgaaggaaaagggaatggtagtgagaaattgggcaccacaagatgcaatat |
300 |
Q |
| |
|
||||| | |||||||| || ||| | || |||||||||||||||||||| || |||| ||||||||| || ||||||||||||||||||| |||||||| |
|
|
| T |
10982376 |
gaggagcaaagtttggacgagttgctccctgaagggtttttggagaggacaaaagaaaggggaatggtggtaagaaattgggcaccacaaggtgcaatat |
10982475 |
T |
|
| Q |
301 |
tgagtcacgaatcagttggtggattcgtgactcattgtggatggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggccttt |
400 |
Q |
| |
|
| | || || || | |||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||||||||||| | | ||||| || |
|
|
| T |
10982476 |
taaagcatgactcgatcggtggattcgtgacacattgtggatggaactcggtgttggaagctgtatgtgaaggagtgcctatggtggca---tggccatt |
10982572 |
T |
|
| Q |
401 |
gtatgcagaacaaaggttgaacaaaatgattttggttgaggaaatgaaggtggctttggaactaaatgggtcnnnnnnngggtttgtgagtggaaatgag |
500 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||| | || | || |||||||||||||||| ||| |
|
|
| T |
10982573 |
gtatgcagaacaaaggctgaacaaggtgattttggttgaggagatgaaggttgctttggaattgaaggattcaaaagacgggtttgtgagtggaaccgag |
10982672 |
T |
|
| Q |
501 |
ttgggggagagagttaaggagttgatggaatcagaaaaagggaaagagattagagagacaattttgaagatgaaaataagtgctaaggaggcaaaaggag |
600 |
Q |
| |
|
|| ||||| | ||||||| || ||||| || || || ||||||||||||||| | | ||||| |||||||||||||||||||| ||||||| || || |
|
|
| T |
10982673 |
ttaggggatcaaattaaggaattaatggactccgataaggggaaagagattagacaaattattttcaagatgaaaataagtgctaaagaggcaagagaag |
10982772 |
T |
|
| Q |
601 |
gaggtgga |
608 |
Q |
| |
|
||||||| |
|
|
| T |
10982773 |
aaggtgga |
10982780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 42 - 612
Target Start/End: Original strand, 11018828 - 11019395
Alignment:
| Q |
42 |
tgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaagcatggggagattttctaaggctcagttgaatgagatagcta |
141 |
Q |
| |
|
||||||| |||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| |||||||||||||||| |
|
|
| T |
11018828 |
tgtttgagttggctcgactcgcaaccaagtcaaagcgtcgtgttgttgagctttggaagcatgggaagattttctagggctcaattgaatgagatagcta |
11018927 |
T |
|
| Q |
142 |
ttggattggagaaaagtgagcaaagattcttatggattgtaaggagcgagtcaaacttggaggaacttagtttggatgacttgttgccagaagggttttt |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| |||| ||||| || || ||| || | | |||||||| || || || |||||||||||||| |
|
|
| T |
11018928 |
ttggattggagaaaagtgagcaaagattcttgtgggttgttaggagtgaaccagactcagacaagttgagtttggacgagttatttccagaagggttttt |
11019027 |
T |
|
| Q |
242 |
ggagaggacgaaggaaaagggaatggtagtgagaaattgggcaccacaagatgcaatattgagtcacgaatcagttggtggattcgtgactcattgtgga |
341 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| ||||||||||| | || || |||||||| ||||||||||||||| |
|
|
| T |
11019028 |
ggagaggacaaaggacaagggaatggttgtgagaaattgggccccacaagttgcgatattgagtcataactccgtgggtggatttgtgactcattgtgga |
11019127 |
T |
|
| Q |
342 |
tggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggcctttgtatgcagaacaaaggttgaacaaaatgattttggttgagg |
441 |
Q |
| |
|
|||||||| || |||||||||||||||||||| ||||| |||||| | |||||||||| |||||||||||| | || | | || |||| || || | |
|
|
| T |
11019128 |
tggaactccgtgttggaagctatttgtgaaggggtgccaatgattgca---tggcctttgttcgcagaacaaaggctaaatagattggttttagtcgatg |
11019224 |
T |
|
| Q |
442 |
aaatgaaggtggctttggaactaaatgggtcnnnnnnngggtttgtgagtggaaatgagttgggggagagagttaaggagttgatggaatcagaaaaagg |
541 |
Q |
| |
|
||||||||||||||||| || | || || ||||||||||||| | |||||||| |||||||||||||||||||||||||| || || |
|
|
| T |
11019225 |
aaatgaaggtggctttgaaagtgaaccaatcagaaaataggtttgtgagtggcacagagttgggtgagagagttaaggagttgatggaatcggaccgtgg |
11019324 |
T |
|
| Q |
542 |
gaaagagattagagagacaattttgaagatgaaaataagtgctaaggaggcaaaaggaggaggtggatctt |
612 |
Q |
| |
|
|| || |||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11019325 |
aaaggatattaaagagaggattttgaaaatgaaaataagtgctaaggaggcaagaggaggaggtggatctt |
11019395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 457
Target Start/End: Original strand, 11050229 - 11050356
Alignment:
| Q |
327 |
gtgactcattgtggatggaactcagtattggaagctatttgtgaaggagtgcctatgattctacactggcctttgtatgcagaacaaaggttgaacaaaa |
426 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||||| |||||| ||||| |||||| | |||||||||| ||||||||||||| | || | | |
|
|
| T |
11050229 |
gtgattcattgtggatggaactccgtgttggaagctatttatgaaggggtgccaatgattgca---tggcctttgtttgcagaacaaaggctaaatagat |
11050325 |
T |
|
| Q |
427 |
tgattttggttgaggaaatgaaggtggcttt |
457 |
Q |
| |
|
|| |||| || || ||||||||||||||||| |
|
|
| T |
11050326 |
tggttttagtcgatgaaatgaaggtggcttt |
11050356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 18300188 - 18300125
Alignment:
| Q |
38 |
tgggtgtttgatttggcttgactcgcaacctagtcaaagcgtcgtgtttttgagttttggaagc |
101 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
18300188 |
tgggtgtttgagttggctcaacttgcaacctagtcaaagtgttgtgtttttgagctttggaagc |
18300125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 4256408 - 4256446
Alignment:
| Q |
312 |
tcagttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
4256408 |
tcagttggtggattcttgactcattgaggatggaactca |
4256446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Original strand, 4490156 - 4490190
Alignment:
| Q |
316 |
ttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4490156 |
ttggtggattcttgactcattgtggatggaactca |
4490190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Complemental strand, 4493286 - 4493252
Alignment:
| Q |
316 |
ttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4493286 |
ttggtggattcttgactcattgtggatggaactca |
4493252 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Complemental strand, 4557456 - 4557422
Alignment:
| Q |
316 |
ttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4557456 |
ttggtggattcttgactcattgtggatggaactca |
4557422 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Complemental strand, 4592562 - 4592528
Alignment:
| Q |
316 |
ttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4592562 |
ttggtggattcttgactcattgtggatggaactca |
4592528 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 4516656 - 4516619
Alignment:
| Q |
312 |
tcagttggtggattcgtgactcattgtggatggaactc |
349 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
4516656 |
tcagttggaggattcttgactcattgtggatggaactc |
4516619 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Complemental strand, 3086751 - 3086717
Alignment:
| Q |
316 |
ttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3086751 |
ttggtggattcttgactcattgtggatggaactca |
3086717 |
T |
|
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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 350
Target Start/End: Original strand, 3483 - 3519
Alignment:
| Q |
314 |
agttggtggattcgtgactcattgtggatggaactca |
350 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
3483 |
agttggtggattcttaactcattgtggatggaactca |
3519 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 24462307 - 24462263
Alignment:
| Q |
315 |
gttggtggattcgtgactcattgtggatggaactcagtattggaa |
359 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
24462307 |
gttggtgcatttttgactcattgtggatggaactcagtgttggaa |
24462263 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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