View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10565_high_16 (Length: 247)
Name: NF10565_high_16
Description: NF10565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10565_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 43191059 - 43190814
Alignment:
| Q |
1 |
aatatttatcgtaatttttctctcatgtacatacagatacatttaatcttgcatgaaatatttattagtcaaaacatgtttgtaattctgaccatttcaa |
100 |
Q |
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| T |
43191059 |
aatatttatcttaatttttctctcatgtacatacagatacatgtaatcttgcatgaaatatttattagtcaaaacatgtttgtaattctgaccatttcaa |
43190960 |
T |
|
| Q |
101 |
tactgtgcattagatgaaattgaagacttatcctaaatggataaaaatgtgtaccacccaactcaattctcgaactctacctatcctgaaacaataccgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
43190959 |
tactgtgcattagatgaaattgaagacttatcctaaatggataaaaatgtttaccacccaactcaattctcgaactctaccaatcctgaaacaataccgt |
43190860 |
T |
|
| Q |
201 |
gtaccacccatgttctgatgtaactttatttttctctctgcttctc |
246 |
Q |
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||||||||||| ||||||||||||||||||||||||| || ||||| |
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| T |
43190859 |
gtaccacccatattctgatgtaactttatttttctctttgtttctc |
43190814 |
T |
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