View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10565_low_15 (Length: 269)

Name: NF10565_low_15
Description: NF10565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10565_low_15
NF10565_low_15
[»] chr7 (44 HSPs)
chr7 (19-254)||(29039054-29039289)
chr7 (86-254)||(6719108-6719274)
chr7 (59-254)||(34405625-34405828)
chr7 (59-254)||(6747632-6747835)
chr7 (86-254)||(36422187-36422364)
chr7 (59-254)||(42515454-42515656)
chr7 (60-242)||(26957603-26957793)
chr7 (59-254)||(2189053-2189256)
chr7 (88-254)||(28495791-28495966)
chr7 (60-254)||(2611686-2611888)
chr7 (139-254)||(46425738-46425853)
chr7 (137-254)||(2193251-2193368)
chr7 (136-254)||(2941791-2941909)
chr7 (60-254)||(679727-679928)
chr7 (136-251)||(11517426-11517540)
chr7 (59-254)||(35474155-35474358)
chr7 (58-252)||(43233321-43233523)
chr7 (136-254)||(13125170-13125288)
chr7 (141-254)||(42515091-42515204)
chr7 (72-226)||(3305374-3305536)
chr7 (140-254)||(28495642-28495756)
chr7 (136-254)||(9124953-9125071)
chr7 (137-254)||(22529269-22529386)
chr7 (136-254)||(18833280-18833398)
chr7 (137-254)||(35527155-35527272)
chr7 (167-254)||(2465949-2466036)
chr7 (95-254)||(29357490-29357657)
chr7 (60-176)||(10430673-10430797)
chr7 (182-254)||(2465773-2465845)
chr7 (136-252)||(5406624-5406740)
chr7 (136-232)||(13124757-13124853)
chr7 (144-252)||(25182363-25182471)
chr7 (140-254)||(31406618-31406732)
chr7 (137-254)||(36015445-36015562)
chr7 (60-187)||(2463552-2463687)
chr7 (145-254)||(1628719-1628825)
chr7 (59-234)||(16811900-16812075)
chr7 (144-249)||(26421344-26421449)
chr7 (136-254)||(9623202-9623320)
chr7 (191-253)||(16192368-16192430)
chr7 (186-254)||(31743858-31743926)
chr7 (173-242)||(6585639-6585708)
chr7 (192-241)||(11372501-11372550)
chr7 (166-254)||(26421794-26421882)
[»] chr2 (37 HSPs)
chr2 (60-254)||(18098912-18099115)
chr2 (59-254)||(33174867-33175070)
chr2 (60-254)||(29804592-29804794)
chr2 (59-254)||(16379301-16379505)
chr2 (86-254)||(33174440-33174615)
chr2 (60-254)||(25338031-25338233)
chr2 (63-254)||(1706955-1707153)
chr2 (60-254)||(1912434-1912637)
chr2 (60-254)||(8256436-8256638)
chr2 (86-252)||(18447954-18448129)
chr2 (60-254)||(41754199-41754401)
chr2 (60-251)||(25434093-25434292)
chr2 (136-254)||(30966228-30966346)
chr2 (136-252)||(24818320-24818436)
chr2 (60-254)||(15619808-15620010)
chr2 (136-254)||(30966684-30966802)
chr2 (137-254)||(11388184-11388299)
chr2 (59-179)||(18098670-18098799)
chr2 (59-254)||(27882960-27883163)
chr2 (60-254)||(33770920-33771113)
chr2 (136-254)||(1953149-1953267)
chr2 (141-254)||(5399851-5399964)
chr2 (141-254)||(29259654-29259767)
chr2 (142-254)||(38898946-38899058)
chr2 (60-254)||(15639650-15639846)
chr2 (69-254)||(16378856-16379049)
chr2 (161-254)||(11394554-11394646)
chr2 (141-252)||(83016-83127)
chr2 (152-254)||(8073902-8074004)
chr2 (139-252)||(20502018-20502133)
chr2 (151-259)||(30963749-30963857)
chr2 (153-242)||(8181397-8181486)
chr2 (139-252)||(16541982-16542095)
chr2 (191-252)||(30963299-30963360)
chr2 (140-200)||(30961979-30962039)
chr2 (186-254)||(13191018-13191086)
chr2 (193-254)||(36924456-36924519)
[»] chr5 (39 HSPs)
chr5 (59-253)||(10926981-10927184)
chr5 (71-254)||(10927437-10927629)
chr5 (60-254)||(2193726-2193928)
chr5 (59-254)||(27646869-27647073)
chr5 (60-254)||(20039508-20039710)
chr5 (59-254)||(34867699-34867902)
chr5 (60-254)||(39146849-39147051)
chr5 (60-254)||(42788680-42788881)
chr5 (137-254)||(17445489-17445606)
chr5 (59-254)||(21886180-21886383)
chr5 (60-254)||(34371522-34371724)
chr5 (59-254)||(34371977-34372180)
chr5 (59-254)||(15513046-15513250)
chr5 (136-254)||(22556530-22556648)
chr5 (136-254)||(189062-189180)
chr5 (141-254)||(8642068-8642181)
chr5 (60-254)||(18304341-18304543)
chr5 (136-254)||(2474399-2474517)
chr5 (134-254)||(8391356-8391475)
chr5 (136-254)||(3887091-3887209)
chr5 (136-254)||(22556963-22557081)
chr5 (136-254)||(2473953-2474071)
chr5 (141-254)||(1821905-1822018)
chr5 (141-254)||(3886635-3886748)
chr5 (136-254)||(30719839-30719957)
chr5 (137-254)||(42429141-42429257)
chr5 (137-254)||(11160715-11160832)
chr5 (136-222)||(22975076-22975162)
chr5 (136-254)||(30684590-30684708)
chr5 (136-248)||(2058696-2058808)
chr5 (152-254)||(29680141-29680236)
chr5 (60-191)||(11757339-11757470)
chr5 (136-254)||(4658027-4658144)
chr5 (144-242)||(16370754-16370852)
chr5 (142-254)||(24182279-24182391)
chr5 (168-254)||(4673505-4673591)
chr5 (156-254)||(18750230-18750328)
chr5 (219-252)||(39801498-39801531)
chr5 (204-252)||(32574694-32574742)
[»] chr4 (61 HSPs)
chr4 (59-254)||(50398566-50398769)
chr4 (59-254)||(4127465-4127669)
chr4 (60-254)||(1645777-1645979)
chr4 (60-254)||(12692027-12692229)
chr4 (59-254)||(4127917-4128121)
chr4 (141-254)||(14572178-14572291)
chr4 (59-254)||(23942817-23943017)
chr4 (89-254)||(53996143-53996317)
chr4 (60-254)||(3169116-3169318)
chr4 (88-254)||(24629005-24629183)
chr4 (60-254)||(21220359-21220562)
chr4 (139-254)||(50399021-50399136)
chr4 (139-254)||(51331309-51331424)
chr4 (60-254)||(9423886-9424088)
chr4 (86-254)||(24629461-24629638)
chr4 (137-242)||(29628707-29628812)
chr4 (142-254)||(49998636-49998748)
chr4 (136-254)||(14571749-14571867)
chr4 (136-254)||(44471353-44471471)
chr4 (136-249)||(35871622-35871735)
chr4 (136-254)||(23350311-23350429)
chr4 (59-231)||(53854858-53855039)
chr4 (60-254)||(14351705-14351907)
chr4 (137-254)||(1464142-1464259)
chr4 (137-254)||(8467828-8467945)
chr4 (158-254)||(7678650-7678746)
chr4 (75-242)||(21067662-21067834)
chr4 (140-254)||(31817880-31817994)
chr4 (136-254)||(44470902-44471020)
chr4 (136-252)||(27026498-27026613)
chr4 (144-254)||(17628513-17628623)
chr4 (136-254)||(15306119-15306243)
chr4 (89-254)||(21067220-21067394)
chr4 (142-254)||(41869918-41870030)
chr4 (136-239)||(27578952-27579055)
chr4 (148-254)||(45682209-45682315)
chr4 (136-249)||(17029324-17029437)
chr4 (141-254)||(31817426-31817539)
chr4 (153-254)||(43928991-43929092)
chr4 (144-254)||(23976247-23976357)
chr4 (136-252)||(17028868-17028984)
chr4 (141-252)||(13266085-13266196)
chr4 (137-254)||(23943270-23943383)
chr4 (146-252)||(42838628-42838733)
chr4 (135-200)||(20309600-20309665)
chr4 (204-252)||(20306191-20306239)
chr4 (186-254)||(33764904-33764972)
chr4 (136-254)||(13613925-13614043)
chr4 (136-254)||(27029272-27029389)
chr4 (212-254)||(50814853-50814895)
chr4 (137-210)||(10165949-10166022)
chr4 (136-249)||(24271583-24271699)
chr4 (144-254)||(26200313-26200425)
chr4 (193-254)||(27578485-27578546)
chr4 (137-233)||(44830994-44831088)
chr4 (141-176)||(35477802-35477837)
chr4 (145-235)||(17628971-17629061)
chr4 (136-193)||(33987160-33987217)
chr4 (217-254)||(39902481-39902518)
chr4 (215-259)||(23091534-23091578)
chr4 (62-130)||(51331442-51331509)
[»] chr6 (45 HSPs)
chr6 (62-254)||(3652398-3652598)
chr6 (59-254)||(6330946-6331149)
chr6 (72-254)||(23986351-23986541)
chr6 (60-254)||(2681250-2681452)
chr6 (60-254)||(20896722-20896924)
chr6 (60-254)||(20850231-20850433)
chr6 (60-242)||(14771765-14771955)
chr6 (60-254)||(20126216-20126418)
chr6 (142-254)||(17027565-17027677)
chr6 (136-254)||(16519962-16520080)
chr6 (134-252)||(31821728-31821846)
chr6 (86-254)||(11062221-11062397)
chr6 (59-210)||(3652888-3653047)
chr6 (142-254)||(13191547-13191659)
chr6 (136-254)||(7911872-7911990)
chr6 (136-254)||(13492783-13492901)
chr6 (141-242)||(17731159-17731260)
chr6 (141-254)||(23776440-23776553)
chr6 (142-254)||(9352062-9352174)
chr6 (138-254)||(9440343-9440459)
chr6 (59-254)||(21311880-21312083)
chr6 (136-231)||(9440485-9440580)
chr6 (136-254)||(7912304-7912422)
chr6 (140-254)||(15929580-15929694)
chr6 (137-254)||(17851369-17851486)
chr6 (60-254)||(21311424-21311627)
chr6 (59-254)||(2890873-2891074)
chr6 (93-254)||(27334103-27334273)
chr6 (93-254)||(27394843-27395013)
chr6 (90-259)||(17850857-17851035)
chr6 (144-252)||(28065874-28065982)
chr6 (60-242)||(2720610-2720800)
chr6 (143-254)||(20735696-20735807)
chr6 (144-252)||(32292887-32292995)
chr6 (137-254)||(15929194-15929311)
chr6 (60-242)||(33775050-33775240)
chr6 (181-254)||(1991592-1991665)
chr6 (153-227)||(9441061-9441135)
chr6 (136-254)||(12194324-12194440)
chr6 (204-254)||(13492394-13492444)
chr6 (181-254)||(20732617-20732690)
chr6 (182-254)||(9440891-9440963)
chr6 (140-252)||(17205337-17205449)
chr6 (192-250)||(28583013-28583071)
chr6 (207-239)||(10964369-10964401)
[»] chr8 (39 HSPs)
chr8 (60-252)||(27022374-27022574)
chr8 (59-254)||(10844792-10844995)
chr8 (55-254)||(12827288-12827495)
chr8 (60-254)||(22026289-22026491)
chr8 (59-254)||(27925808-27926011)
chr8 (59-254)||(32292306-32292509)
chr8 (59-254)||(6464944-6465147)
chr8 (60-254)||(8080376-8080578)
chr8 (60-254)||(22549029-22549231)
chr8 (59-254)||(22840563-22840766)
chr8 (60-254)||(41659139-41659340)
chr8 (141-254)||(2044057-2044170)
chr8 (59-254)||(22548583-22548786)
chr8 (86-254)||(27021913-27022094)
chr8 (60-254)||(28453249-28453450)
chr8 (89-254)||(28375088-28375262)
chr8 (138-254)||(10844649-10844765)
chr8 (142-254)||(25147536-25147648)
chr8 (136-254)||(34308513-34308631)
chr8 (151-252)||(22705181-22705282)
chr8 (59-254)||(33852292-33852494)
chr8 (136-254)||(27819280-27819398)
chr8 (147-254)||(17103086-17103193)
chr8 (136-254)||(25144766-25144884)
chr8 (141-250)||(21316147-21316256)
chr8 (136-254)||(34308969-34309091)
chr8 (136-254)||(12100686-12100803)
chr8 (136-254)||(25147961-25148079)
chr8 (141-239)||(29971450-29971548)
chr8 (140-254)||(30334942-30335056)
chr8 (168-254)||(41912996-41913082)
chr8 (136-252)||(6466705-6466820)
chr8 (167-254)||(3744663-3744750)
chr8 (142-253)||(17429501-17429611)
chr8 (145-254)||(3745104-3745213)
chr8 (154-252)||(15568041-15568139)
chr8 (190-254)||(15819049-15819113)
chr8 (136-198)||(9250996-9251057)
chr8 (136-184)||(44041884-44041932)
[»] chr1 (38 HSPs)
chr1 (59-254)||(20054114-20054317)
chr1 (59-254)||(20054570-20054773)
chr1 (59-254)||(20055026-20055229)
chr1 (59-254)||(20055482-20055685)
chr1 (59-254)||(20055938-20056141)
chr1 (59-254)||(20056394-20056597)
chr1 (59-254)||(20057297-20057500)
chr1 (60-254)||(16451967-16452169)
chr1 (60-254)||(16461120-16461322)
chr1 (60-254)||(43057557-43057759)
chr1 (60-254)||(52250116-52250318)
chr1 (54-254)||(20845695-20845903)
chr1 (59-254)||(20057753-20057956)
chr1 (59-253)||(38340815-38341017)
chr1 (137-254)||(50002319-50002436)
chr1 (59-254)||(43057099-43057301)
chr1 (139-254)||(50002741-50002856)
chr1 (141-254)||(35759642-35759755)
chr1 (141-254)||(35760948-35761061)
chr1 (136-254)||(20061225-20061343)
chr1 (59-254)||(20056850-20057044)
chr1 (59-254)||(31822697-31822900)
chr1 (72-254)||(50003109-50003299)
chr1 (59-254)||(7548002-7548203)
chr1 (89-254)||(12883462-12883636)
chr1 (137-254)||(30872984-30873101)
chr1 (136-254)||(2328309-2328427)
chr1 (141-254)||(46693769-46693883)
chr1 (141-254)||(23180729-23180842)
chr1 (137-252)||(10820587-10820702)
chr1 (140-254)||(2634922-2635036)
chr1 (137-254)||(12727986-12728104)
chr1 (136-254)||(16907228-16907346)
chr1 (152-252)||(51372910-51373010)
chr1 (136-254)||(2634459-2634578)
chr1 (206-254)||(20060374-20060422)
chr1 (212-254)||(31823118-31823160)
chr1 (60-127)||(30873119-30873187)
[»] scaffold0047 (3 HSPs)
scaffold0047 (59-252)||(18170-18372)
scaffold0047 (79-254)||(17632-17816)
scaffold0047 (59-135)||(17841-17917)
[»] chr3 (44 HSPs)
chr3 (59-254)||(16811290-16811493)
chr3 (63-254)||(25230282-25230482)
chr3 (63-254)||(25237869-25238069)
chr3 (59-254)||(13150133-13150335)
chr3 (60-254)||(11180068-11180269)
chr3 (60-254)||(37044944-37045147)
chr3 (62-254)||(50347658-50347858)
chr3 (59-254)||(25230739-25230943)
chr3 (59-254)||(25238326-25238530)
chr3 (59-254)||(28561655-28561858)
chr3 (72-254)||(16810847-16811037)
chr3 (80-254)||(20885151-20885333)
chr3 (60-254)||(39653074-39653276)
chr3 (136-254)||(31284310-31284428)
chr3 (73-254)||(32227255-32227444)
chr3 (141-254)||(30529686-30529799)
chr3 (107-254)||(32227457-32227612)
chr3 (60-254)||(14813859-14814061)
chr3 (140-254)||(39640935-39641049)
chr3 (141-252)||(8067279-8067390)
chr3 (140-254)||(25239111-25239225)
chr3 (136-254)||(25248105-25248223)
chr3 (141-254)||(27187364-27187477)
chr3 (141-254)||(41472300-41472412)
chr3 (139-254)||(32796969-32797084)
chr3 (142-254)||(7477191-7477303)
chr3 (142-254)||(7493881-7493993)
chr3 (137-252)||(14820149-14820264)
chr3 (144-254)||(29224326-29224436)
chr3 (137-254)||(2911090-2911207)
chr3 (186-254)||(13150588-13150656)
chr3 (151-254)||(25802582-25802685)
chr3 (172-254)||(32386768-32386850)
chr3 (137-254)||(25803038-25803155)
chr3 (59-135)||(39653529-39653604)
chr3 (186-254)||(25238718-25238786)
chr3 (141-242)||(41473996-41474097)
chr3 (194-254)||(4067394-4067454)
chr3 (136-200)||(12820638-12820702)
chr3 (60-125)||(13155374-13155437)
chr3 (141-177)||(32388842-32388878)
chr3 (212-252)||(3890048-3890088)
chr3 (212-252)||(3899870-3899910)
chr3 (59-119)||(25238849-25238908)
[»] scaffold0168 (1 HSPs)
scaffold0168 (60-254)||(2652-2854)
[»] scaffold0002 (2 HSPs)
scaffold0002 (59-254)||(154667-154869)
scaffold0002 (60-125)||(151551-151614)
[»] scaffold0005 (2 HSPs)
scaffold0005 (141-254)||(245085-245198)
scaffold0005 (136-254)||(245509-245627)
[»] scaffold0243 (1 HSPs)
scaffold0243 (60-254)||(1130-1332)
[»] scaffold0088 (1 HSPs)
scaffold0088 (58-255)||(23581-23786)
[»] scaffold0333 (2 HSPs)
scaffold0333 (60-254)||(4471-4673)
scaffold0333 (59-254)||(4925-5133)
[»] scaffold0040 (1 HSPs)
scaffold0040 (136-254)||(2244-2362)
[»] scaffold0007 (1 HSPs)
scaffold0007 (136-254)||(142308-142426)
[»] scaffold0322 (2 HSPs)
scaffold0322 (142-254)||(18966-19078)
scaffold0322 (141-200)||(18209-18268)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-254)||(105720-105832)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-252)||(10294-10410)
[»] scaffold0020 (1 HSPs)
scaffold0020 (136-254)||(107497-107615)
[»] scaffold0499 (1 HSPs)
scaffold0499 (137-254)||(2085-2202)
[»] scaffold0022 (2 HSPs)
scaffold0022 (136-254)||(162712-162830)
scaffold0022 (139-252)||(69851-69964)
[»] scaffold0664 (1 HSPs)
scaffold0664 (141-254)||(4016-4129)
[»] scaffold0557 (2 HSPs)
scaffold0557 (59-191)||(659-799)
scaffold0557 (187-254)||(2150-2217)
[»] scaffold0442 (1 HSPs)
scaffold0442 (59-185)||(2413-2548)
[»] scaffold0101 (1 HSPs)
scaffold0101 (142-253)||(45387-45497)
[»] scaffold0391 (1 HSPs)
scaffold0391 (89-250)||(14680-14849)
[»] scaffold0036 (1 HSPs)
scaffold0036 (146-254)||(26074-26182)


Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 29039289 - 29039054
Alignment:
Q  19 tgaaatgcttatgcttgaataagatcctaaagactcaacgatgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  29039289 tgaaatgcttatgcttgaataagatcctaaagactcaacgatgtaacacccacggctgatgggggcaggggagtgatcgccggtgcacaaggcacgacaa 29039190  T
Q  119 tgagcggctcccgacagaaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29039189 tgagcggctcccgacagaaaccgaatcacatcggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaatt 29039090  T
Q  219 gtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  29039089 gtttggtactacctatatcaacaacatgcatcttct 29039054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 6719274 - 6719108
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacagaaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgg 185  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||  | ||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  6719274 ggggagtggtcgccggtgcacaaggcacgccaatgagcggctcccga--ggaaccgaatcacattggaatgagagggatcctgaggctgtgtaggtatgg 6719177  T
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  6719176 gactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttct 6719108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 34405828 - 34405625
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          ||||||||||||     
T  34405828 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacac 34405730  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||  ||||||    
T  34405729 cggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcat 34405630  T
Q  250 cttct 254  Q
    |||||    
T  34405629 cttct 34405625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 6747835 - 6747632
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacat 149  Q
    |||||||||||| |||||| |||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||          || | |||||||||    
T  6747835 atgtaacacccaaggctgacgagggcaggg-agtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagctgaatcacat 6747737  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
     ||||||||||||||||||||||||||||| ||||  |||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  6747736 tggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcat 6747637  T
Q  250 cttct 254  Q
    |||||    
T  6747636 cttct 6747632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 36422187 - 36422364
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||          || ||||||||  |||||||||||||||||| ||||| ||    
T  36422187 ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacgccggaatgagagggatcctaaggccttg 36422286  T
Q  177 tagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  36422287 taggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttct 36422364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 42515454 - 42515656
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||| ||||| |||||| |||||||||| |||| ||||||||||||  |||  |||||||||| |||||||||||          |||||||||||||    
T  42515454 atgtaatacccaaggctgacgagggcaggg-agtg-tcgccggtgcaaggggcgtgacaatgagcagctcccgacagcttctagacgaaccgaatcacat 42515551  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | |||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  42515552 cagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcat 42515651  T
Q  250 cttct 254  Q
    |||||    
T  42515652 cttct 42515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 26957793 - 26957603
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatc 150  Q
    ||||||||| | ||| || |||||| ||| |||| ||| ||||||| ||||||||||||||||||||||||||||         | ||||||||||||||    
T  26957793 tgtaacaccaaaggccgacgagggc-gggaagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaacttctagaggaaccgaatcacatc 26957695  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    ||||||||||||||| |||||| |||||| ||||| |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  26957694 ggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 2189053 - 2189256
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||| || || ||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  2189053 atgtaacactcaaggatgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 2189151  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||| ||| || | ||||||| |||||||||| | ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  2189152 cggaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcat 2189251  T
Q  250 cttct 254  Q
    |||||    
T  2189252 cttct 2189256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 28495791 - 28495966
Alignment:
Q  88 ggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagagggatcctgaggccgtgta 178  Q
    |||||| ||||||||||| ||||||| ||||| |||||||||| |||         | || |||||||||||||||||||||||||| ||||||||||||    
T  28495791 ggagtggtcgccggtgcacaaggcacaacaattagcggctcccaacaacttctagaggaatcgaatcacatcggaatgagagggatcttgaggccgtgta 28495890  T
Q  179 gatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    | |||||||||||||||||||| | ||||||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  28495891 ggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttct 28495966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 2611888 - 2611686
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||| | |||||| |||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||          ||| ||||||||||    
T  2611888 tgtaacaccaaaggctgacgagggt-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaactgaatcacatc 2611790  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||||||| | ||||| |||| ||||| ||||| ||| | ||||||| |||||||||||||||||| ||||| |||||| |||||||    
T  2611789 ggaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatc 2611690  T
Q  251 ttct 254  Q
    ||||    
T  2611689 ttct 2611686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 254
Target Start/End: Original strand, 46425738 - 46425853
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||   ||||||| ||||||||||||||| |||||||||||    
T  46425738 ccgaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatca 46425837  T
Q  239 acaacatgcatcttct 254  Q
    |||| |||||||||||    
T  46425838 acaagatgcatcttct 46425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 2193251 - 2193368
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| ||||||||||||| ||||||| ||||| || ||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||    
T  2193251 aaccgaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatat 2193350  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  2193351 caacaagatgcatcttct 2193368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 2941909 - 2941791
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||| ||||||||||||||||||||||||  || ||||||||| |||||||||| | ||||| | ||||||||||||||||||||||||    
T  2941909 aaactgaatcacatcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctata 2941810  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  2941809 tcaacaagatgcatcttct 2941791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 679727 - 679928
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||| | |||||| |||| | |||||||| |||||| |||| || |||||||||||||| |||||||||||          ||| ||||||||||    
T  679727 tgtaacacctaaggctgacgaggac-ggggagtggtcgccgatgcacaaagcacgacaatgagctgctcccgacagcttctagaggaactgaatcacatc 679825  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     |||||||||||||||||||| ||||||| ||||||| ||||||| |||| | ||||||| |||||||| |||||||||||||||||||||| ||||||     
T  679826 agaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgcata 679924  T
Q  251 ttct 254  Q
    ||||    
T  679925 ttct 679928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 11517540 - 11517426
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||  || ||||||||| ||||| |||| | ||||||| ||||||||||||||||||||||||    
T  11517540 aaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatgg-tgaaggaaggcttataagaattgtttggtactacctata 11517442  T
Q  236 tcaacaacatgcatct 251  Q
    ||||||| ||||||||    
T  11517441 tcaacaagatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 35474358 - 35474155
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga------aac---cgaatcacat 149  Q
    |||||||||| | |||||||||| || |||||||| ||| ||||||| ||||||||||||||||||| ||||||||        |||   |||||||||     
T  35474358 atgtaacacctaaggctgatgagtgc-ggggagtggtcgtcggtgcacaaggcacgacaatgagcggttcccgacaacttctagaacagtcgaatcacac 35474260  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||| ||| ||||||| |||| |||||||||||||||   || |||| ||||||||||| ||||||| ||||||||||| ||||||    
T  35474259 cggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcat 35474160  T
Q  250 cttct 254  Q
    |||||    
T  35474159 cttct 35474155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 43233321 - 43233523
Alignment:
Q  58 gatgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcaca 148  Q
    ||||||||||||| |||||| ||| || | |||||| ||||||||||| |||||||||||||||||||||||  ||||          ||||||||||||    
T  43233321 gatgtaacacccaaggctgacgagtgc-gaggagtggtcgccggtgcataaggcacgacaatgagcggctcctaacagcttctagaggaaccgaatcaca 43233419  T
Q  149 tcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgca 248  Q
     || ||||||||||||| ||||||||||||| |||| ||||  |||||| || | || |||| |||||||||||||||||| |||||||||||| |||||    
T  43233420 ccgaaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgca 43233519  T
Q  249 tctt 252  Q
    ||||    
T  43233520 tctt 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 13125288 - 13125170
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||| |||||||||||||||||| ||||||| || || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  13125288 aaactgaatcatatcggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 13125189  T
Q  236 tcaacaacatgcatcttct 254  Q
    | ||||| |||||||||||    
T  13125188 ttaacaagatgcatcttct 13125170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 42515091 - 42515204
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||| |||| ||||| | || |||| |||||||||||||||||||||||||||||    
T  42515091 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaac 42515190  T
Q  241 aacatgcatcttct 254  Q
    || |||||| ||||    
T  42515191 aagatgcattttct 42515204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 3305536 - 3305374
Alignment:
Q  72 ggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagaggg 162  Q
    |||||| |||||| || ||||| ||||||||| | ||||||||||||||||| |||||||||||          ||||||||||||||| |||||| |||    
T  3305536 ggctgacgagggc-ggagagtggtcgccggtggataaggcacgacaatgagcagctcccgacagcttctagaggaaccgaatcacatcgaaatgaggggg 3305438  T
Q  163 atcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggta 226  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||||||||    
T  3305437 atcctgaggccgtgtaagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 28495756 - 28495642
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || |||| ||||||||||  ||  ||||||||||||    
T  28495756 cgaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaa 28495657  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  28495656 caagatgcatcttct 28495642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 9124953 - 9125071
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| |||| |||||||||| || |||| ||||  |||||| || | | ||||| ||||||||||||||||||||||||    
T  9124953 aaactgaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctata 9125052  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  9125053 tcaacaagatgcatcttct 9125071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 22529386 - 22529269
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||| ||| |||||||||||||||||||| | ||||  |||||| ||||||||||||| | ||||||| ||||| |||||||||||| ||||||    
T  22529386 aaccgaatcatatccgaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaaggcttataagaaatgtttggtactatctatat 22529287  T
Q  237 caacaacatgcatcttct 254  Q
     ||||| |||||||||||    
T  22529286 aaacaagatgcatcttct 22529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 18833280 - 18833398
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||| ||||||||||||  || ||||| ||| |||||||||  | | ||||| | ||||||||| ||||||||||||    
T  18833280 aaactgaatcacatcggaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctata 18833379  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  18833380 tcaacaagatgcatcttct 18833398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 35527272 - 35527155
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| || |||||||||||||| |||| |||| | ||||||||||   |||||||| | ||||||| |||||||||||||| ||||||||||    
T  35527272 aaccgaatcacaccgaaatgagagggatcccgaggtcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgctacctatat 35527173  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||| ||||    
T  35527172 caacaagatgcatattct 35527155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 2465949 - 2466036
Alignment:
Q  167 tgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||| ||||| |||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  2465949 tgaggccatgtaggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttct 2466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 29357657 - 29357490
Alignment:
Q  95 tcgccggtgcaaaaggcacgacaatgagcggctcccgaca-------ga--aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgg 185  Q
    |||||| |||| ||||||||||||||||||||||||||||       ||  ||| |||||||| || ||||||||| |||| |||| |||| || |||||    
T  29357657 tcgccgatgcataaggcacgacaatgagcggctcccgacaacttctagatgaactgaatcacaccg-aatgagaggtatcccgaggtcgtgcaggtatgg 29357559  T
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| |||||||||| | | | ||| |||||||||||||||||| |||||||||||| |||||||||||    
T  29357558 gactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttct 29357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 10430673 - 10430797
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcacatc 150  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||         || ||||| |||||| |    
T  10430673 tgtaacacccaaggctgatgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgtatcacacc 10430771  T
Q  151 ggaatgagagggatcctgaggccgtg 176  Q
    |||||||||||| |||||||||||||    
T  10430772 ggaatgagagggttcctgaggccgtg 10430797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 2465773 - 2465845
Alignment:
Q  182 atgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  2465773 atgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttct 2465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 5406740 - 5406624
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||||||||| ||||||||| | | ||||  | ||||||||| |||||||||| | ||  ||| ||||||||||||||| ||||||||    
T  5406740 aaactgaatcacatcggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctata 5406641  T
Q  236 tcaacaacatgcatctt 252  Q
    ||||||| |||||||||    
T  5406640 tcaacaagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 13124853 - 13124757
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacct 232  Q
    |||| |||||| || ||||||||||||||| |||||||||| || ||||||||| |||||||||| | ||||||| ||||||||| |||||||||||    
T  13124853 aaactgaatcatattggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 25182363 - 25182471
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    ||||||||||||||||| ||||||||| | ||| |  |||| |||| |||||||||| | || |||| |||||||||||||||||||||||||||||||     
T  25182363 tcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaag 25182462  T
Q  244 atgcatctt 252  Q
    || ||||||    
T  25182463 atacatctt 25182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 31406732 - 31406618
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||  ||||||||||||||||| |||||| |||| |||||||  ||||||||| |  | ||||  |||||||||||||  ||||||||||||    
T  31406732 cgaatcacatcaaaatgagagggatcctgaagccgtgcagatctgggactgaatggttgaaagatgacttattagaattgtttggtgttacctatatcaa 31406633  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  31406632 caagatgcatcttct 31406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 36015562 - 36015445
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||| ||||||| |||||||||||||||||  |||| ||| |  |||| |||| |||||||||| | | ||||| ||||||||||||||||||| |||||    
T  36015562 aaccaaatcacaccggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatat 36015463  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||| ||||||    
T  36015462 caacaagatgcctcttct 36015445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 2463552 - 2463687
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcc---------cgacagaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||| |||||||         | | || ||||||| |||| |    
T  2463552 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgaacggctcctaacagcttctagaggaaccgaaacacacc 2463650  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatggga 187  Q
    |||||||||||| |||||||||| ||||| |||||||    
T  2463651 ggaatgagagggttcctgaggccatgtaggtatggga 2463687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 1628719 - 1628825
Alignment:
Q  145 cacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaaca 244  Q
    ||||| ||||||||||||||  ||| |||||| |||||||||| | ||||||||||   ||||||   | ||||||||||||||| | |||||||||| |    
T  1628719 cacattggaatgagagggatgttgaagccgtgcagatatgggattgcatggttgaagaaaggctt---ataattgtttggtactatcgatatcaacaaga 1628815  T
Q  245 tgcatcttct 254  Q
    ||||||||||    
T  1628816 tgcatcttct 1628825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 16812075 - 16811900
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcacat 149  Q
    |||||||| ||| ||||||  ||||| |||||||| | ||||||||| ||| |||| ||||||||||||||||||         ||||||||||||||||    
T  16812075 atgtaacatccaaggctgactagggc-ggggagtggttgccggtgcacaagacacgccaatgagcggctcccgacggcttctaaagaaaccgaatcacat 16811977  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctat 234  Q
    | |||||||||        | ||||||||| |||| ||||||||||||||| | | ||||| ||||||||||| |||||| ||||    
T  16811976 cagaatgagag--------atgccgtgtaggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 26421449 - 26421344
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    ||||||| |||||| |||| || ||||||| ||||| |||||| |   ||||||||| | || |||| |||||||| ||| ||||||||||||||||||     
T  26421449 tcacatcagaatgatagggttcttgaggccatgtaggtatgggtcagtatggttgaaggaagacttataagaattgcttgatactacctatatcaacaag 26421350  T
Q  244 atgcat 249  Q
    ||||||    
T  26421349 atgcat 26421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 9623202 - 9623320
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggagg-cttacaagaattgtttggtactacctat 234  Q
    |||||||||||||  |||||||||||||||| ||||  ||| |   ||| |||| |||||| ||| ||||  |||| |||||||||||| ||| ||||||    
T  9623202 aaaccgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaa-ggagtacttataagaattgtttgataccacctat 9623300  T
Q  235 atcaacaacatgcatcttct 254  Q
    |||||||| |||||||||||    
T  9623301 atcaacaagatgcatcttct 9623320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 16192368 - 16192430
Alignment:
Q  191 catggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttc 253  Q
    |||| ||||||| ||| ||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttc 16192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 31743926 - 31743858
Alignment:
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| |||||||||| | | ||||| |||||| ||||||| ||| |||||||||||| |||||||||||    
T  31743926 gactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttct 31743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 6585639 - 6585708
Alignment:
Q  173 cgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    |||| ||||||| || | |||| ||||| | || |||| || ||||||||||||||||||||||||||||    
T  6585639 cgtgcagatatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaacaa 6585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 11372501 - 11372550
Alignment:
Q  192 atggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||| | ||||||| ||||||||||||||||||||| || |||||    
T  11372501 atggttgaaggaaggcttataagaattgtttggtactacctgtaccaaca 11372550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 26421882 - 26421794
Alignment:
Q  166 ctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||| |  |||| |||| ||||||||||   ||||| | |||||||||| |||||| |||||| |||||| ||| |||||||    
T  26421882 ctgaggccgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttct 26421794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 18099115 - 18098912
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||          ||||||||||||||    
T  18099115 tgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccgaatcacatc 18099016  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  18099015 ggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatc 18098916  T
Q  251 ttct 254  Q
    ||||    
T  18098915 ttct 18098912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 33174867 - 33175070
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| |||||| ||||||||| |||||||||||          || |||||||||||    
T  33174867 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcatgacaatgagtggctcccgacaacttctagacaagccgaatcacat 33174965  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  33174966 cggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 33175065  T
Q  250 cttct 254  Q
    |||||    
T  33175066 cttct 33175070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 29804592 - 29804794
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||| | |||||||| ||||||||||| ||||||||| |||||||||||||||||||          || |||||||||||    
T  29804592 tgtaacacccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagcttctagaggaatcgaatcacatc 29804690  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  29804691 ggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatc 29804790  T
Q  251 ttct 254  Q
    ||||    
T  29804791 ttct 29804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 16379301 - 16379505
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||| |||||| ||||          |||||||||| ||    
T  16379301 atgtaacacccacggctgacgagagcaagggagtggtcgccggtgcacaaggcacgacaatgagcagctcccaacagtttataaacgaaccgaatcaaat 16379400  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
     |||||||||||||||| ||||||||| || ||||||||| |||||||||| | || |||| | ||||||||||||||||||||||||||||| ||||||    
T  16379401 tggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcat 16379500  T
Q  250 cttct 254  Q
    |||||    
T  16379501 cttct 16379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 33174440 - 33174615
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||| ||||||||||||  |||| ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||    
T  33174440 ggggagtggtcgccggtgcaaggggcatgacaatgagcggctcccgacagcttctagacgaaccgaatcacatcggaatgagagggatcctgatgccgtg 33174539  T
Q  177 tagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| ||||||||||||  |||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  33174540 taggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 33174615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 25338233 - 25338031
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| | |||||| ||||||||||| ||||||||||||||||||||||| |||||          ||| |||||||| |    
T  25338233 tgtaacacccaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 25338135  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||||||| |||| || ||||||||| |||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  25338134 ggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 25338035  T
Q  251 ttct 254  Q
    ||||    
T  25338034 ttct 25338031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 254
Target Start/End: Original strand, 1706955 - 1707153
Alignment:
Q  63 aacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcgga 153  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||         | |||||||||||||||||    
T  1706955 aacacccaaggctaacgagggc-ggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaatttctagaggaaccgaatcacatcgga 1707053  T
Q  154 atgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttc 253  Q
    |||||||| |||||||| | |||||| |||| ||||||||| ||||| | || |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  1707054 atgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 1707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 1912434 - 1912637
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||||||||| ||| |||| || ||||||||||||| ||||| |||| ||||||||||||||||| | ||||          ||| ||||||||||    
T  1912434 tgtaacacccacggttgacgaggacaagggagtgatcgccagtgcacaaggtacgacaatgagcggctctcaacagcttttagaggaactgaatcacatc 1912533  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||||||||||||   ||||| |||| ||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||||| |||||||    
T  1912534 ggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatc 1912633  T
Q  251 ttct 254  Q
    ||||    
T  1912634 ttct 1912637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 8256436 - 8256638
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||  |||||||  ||||||||||| |||||||||||||||||||||||||||||          || | ||||||  |    
T  8256436 tgtaacacccaaggctgacgagggt-ggggagtagtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcaaatcacgcc 8256534  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  8256535 ggaatgagagggatcttgaagccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 8256634  T
Q  251 ttct 254  Q
    ||||    
T  8256635 ttct 8256638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 18448129 - 18447954
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||          ||||||||||||||||||||| ||||||||||||||||||    
T  18448129 ggggagtggtcgccggtgcacaaggcacgacaatgagcggttcccgacagcttttagaggaaccgaatcacatcggaatgatagggatcctgaggccgtg 18448030  T
Q  177 tagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||| |||| |||||||||||||||   || |||| ||||||||||||||||||| | ||||||||| |||||||||    
T  18448029 taggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 41754199 - 41754401
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| || ||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||| |||||||| |    
T  41754199 tgtaacacccaaggatgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 41754297  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| || |||||||||| || |||| |||| |||||||||| | ||||||| |||||||||||||||||| |||||||||||| |||||||    
T  41754298 ggaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatc 41754397  T
Q  251 ttct 254  Q
    ||||    
T  41754398 ttct 41754401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 251
Target Start/End: Complemental strand, 25434292 - 25434093
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||| || |||||| |||||| ||||||||  |||||||||| ||||||||||||||||||||||| |||||          |||||||||||| |    
T  25434292 tgtaacacacaaggctgacgagggc-ggggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctaaacgaaccgaatcacacc 25434194  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||||||  | ||||||||| |||||||||| | ||||||| |||||||||||| ||| |||| ||||||||| |||||||    
T  25434193 ggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatc 25434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 30966228 - 30966346
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||| |||||||||||||||||||||||||||||  || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  30966228 aaactgaatcgcatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 30966327  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  30966328 tcaacaagatgcatcttct 30966346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 24818320 - 24818436
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||| || | ||||||| ||||||||||| ||||||||||||    
T  24818320 aaactgaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctata 24818419  T
Q  236 tcaacaacatgcatctt 252  Q
    ||||||| |||||||||    
T  24818420 tcaacaagatgcatctt 24818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 15619808 - 15620010
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| | |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| ||          |||||||| |||||    
T  15619808 tgtaacacccaagactgatgagagc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattacatc 15619906  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     ||||||||||||||| || |||||| |  |||| |||| ||| |||||| | | ||||| ||||||||||||||||||||||||||||||| || ||||    
T  15619907 agaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagatacatc 15620006  T
Q  251 ttct 254  Q
    ||||    
T  15620007 ttct 15620010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 30966684 - 30966802
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||| |||||||||||||||||||||||||||||  |  ||||||||| |||||||||| | ||| ||| ||||||||||||||||||||||||    
T  30966684 aaactgaatcgcatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctata 30966783  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  30966784 tcaacaagatgcatcttct 30966802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 11388184 - 11388299
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||| | | ||||| || ||||||||||||||||||||||    
T  11388184 aaccgaatcacatcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatat 11388281  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  11388282 caacaagatgcatcttct 11388299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 18098799 - 18098670
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcacat 149  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||         || || ||||||||||    
T  18098799 atgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacattgagcggctcccgacagcttatagaggaatcgaatcacat 18098700  T
Q  150 cggaatgagagggatcctgaggccgtgtag 179  Q
    |||||||||||| | |||||||||||||||    
T  18098699 cggaatgagaggaaccctgaggccgtgtag 18098670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 27883163 - 27882960
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacagaa---------accgaatcacat 149  Q
    |||||||| ||| |||||| |||| | |||||||| ||||||||||| ||||||||||||||||||||||||| ||||          |||||||||||     
T  27883163 atgtaacatccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgtcagattctacacgtaccgaatcacac 27883065  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    || |||||||||||||||||||||||| |  |||| |||| ||| |||||| | | ||||| ||||||||||||||| || ||||||||| || ||||||    
T  27883064 cgaaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcat 27882965  T
Q  250 cttct 254  Q
    |||||    
T  27882964 cttct 27882960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 33770920 - 33771113
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||         || ||| |||||||| |    
T  33770920 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 33771018  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| ||||||||         ||||||||| || |||||||   ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  33771019 ggaatgagagggttcctgagg---------tatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 33771109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 1953149 - 1953267
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||||||||||||||||||||||||||||||||| | |||| || |||| |||| |||||||||| | || | || ||||||||||||||||||||||||    
T  1953149 aaaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctata 1953248  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||| | |||||||||||    
T  1953249 tcaactagatgcatcttct 1953267  T

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Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 5399964 - 5399851
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||||| ||||| |||| |  ||||||| |  |||||| || ||||||||| |||||||||||||||||||||||||||||    
T  5399964 gaatcacatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaac 5399865  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  5399864 aagatgcatcttct 5399851  T

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Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 29259767 - 29259654
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||| ||||  |  ||||||||| |||||||||| | |||||||  | |||||||||||||||| |||||||||    
T  29259767 gaatcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaac 29259668  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  29259667 aagatgcatcttct 29259654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 38899058 - 38898946
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggag-gcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||| ||||| |||| ||||||||||||| |||  ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  38899058 aatcacatcggaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaa-ggagagcttataagaattgtttggtactacctatatcaac 38898960  T
Q  241 aacatgcatcttct 254  Q
    || |||||| ||||    
T  38898959 aagatgcattttct 38898946  T

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Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 15639650 - 15639846
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| | |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| ||          |||||||| |||||    
T  15639650 tgtaacacccaagactgatgagagc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattacatc 15639748  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     ||||||||||||||| ||||| ||| |  ||||      ||| |||||| | | ||||| | |||||||||||||||||||||||||||||||| ||||    
T  15639749 agaatgagagggatcccgaggctgtggaagtatg------catagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacatacatc 15639842  T

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Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 254
Target Start/End: Original strand, 16378856 - 16379049
Alignment:
Q  69 cacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgaga 159  Q
    ||||||||| ||| |||||| |||| ||||||||||| ||| ||||||||||||||| |||  ||||          |||||| ||||| ||||||||||    
T  16378856 cacggctgacgagagcagggtagtggtcgccggtgcataagacacgacaatgagcggttcctaacagtttatagatgaaccga-tcacaccggaatgaga 16378954  T
Q  160 gggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||| | ||||||||| |  |||| |||| |||||||||| | || |||| | |||||||||| |||||||||||||||||| |||||||||||    
T  16378955 gggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttct 16379049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 11394554 - 11394646
Alignment:
Q  161 ggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||| ||||||||| |||| ||||||||||||||| | | ||||| || |||||||||||||||||||||||||||| |||||||||||    
T  11394554 ggatcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttct 11394646  T

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Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 83016 - 83127
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||| ||| ||||||||||||||||||   ||| || |||| ||||||||||||||| | | ||||| |||||| ||||||||||||||||| ||||    
T  83016 gaatcacgtcgaaatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaac 83115  T
Q  241 aacatgcatctt 252  Q
    || ||| |||||    
T  83116 aagatgaatctt 83127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 8073902 - 8074004
Alignment:
Q  152 gaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatct 251  Q
    |||||||||||||| ||||   ||| || |||||| ||| | ||||||| |||| |||| |||||||||||||||||||||||| |||||| ||||||||    
T  8073902 gaatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatct 8074001  T
Q  252 tct 254  Q
    |||    
T  8074002 tct 8074004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 20502018 - 20502133
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctga--ggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||| ||||| |||||||||||||||||  |  || |||| |  ||||||||| |||||||||| | ||||||| |||||||||||||||||  ||||||    
T  20502018 ccgattcacaccggaatgagagggatcccaaaaggtcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatat 20502117  T
Q  237 caacaacatgcatctt 252  Q
    |||||| |||| ||||    
T  20502118 caacaagatgcttctt 20502133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 30963857 - 30963749
Alignment:
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||| |||||| || || | || | |||||||||| | |  |||| ||||||||| |||| |||||||||||||||| |||||||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  251 ttctctctg 259  Q
    |||| ||||    
T  30963757 ttctttctg 30963749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 8181486 - 8181397
Alignment:
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    |||||||||||||| ||| || | ||| |||||||||   |||||||| | || |||  |||||||||||||||||||||||||||||||    
T  8181486 aatgagagggatcccgagaccttataggtatgggactttgtggttgaaggaagacttttaagaattgtttggtactacctatatcaacaa 8181397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 16541982 - 16542095
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    |||||||||||| |||||| ||||||||    || |||||| ||||   ||||||||||||| | || |||| || |||||||| |||||||||||||||    
T  16541982 ccgaatcacatcagaatgatagggatcccagagctgtgtaggtatgactctacatggttgaaggaagacttataataattgttttgtactacctatatca 16542081  T
Q  239 acaacatgcatctt 252  Q
    |||| ||| |||||    
T  16542082 acaagatgtatctt 16542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 30963360 - 30963299
Alignment:
Q  191 catggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    |||| ||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  30963360 catgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 30962039 - 30961979
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaa 200  Q
    ||||||||||| ||||||||| |||||||| ||||||||| ||||||| | ||||||||||    
T  30962039 cgaatcacatcagaatgagagagatcctgaagccgtgtaggtatgggattgcatggttgaa 30961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 13191018 - 13191086
Alignment:
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| ||||||| || | || |||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  13191018 gactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttct 13191086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 36924519 - 36924456
Alignment:
Q  193 tggttgaatggaggcttacaagaattgtttggtactac--ctatatcaacaacatgcatcttct 254  Q
    |||||||| | ||||||| ||||||||||||||| |||   ||||||||||| |||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttct 36924456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 253
Target Start/End: Complemental strand, 10927184 - 10926981
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||||          |||||||||||||    
T  10927184 atgtaacacccacagctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagtagctcccgacagcttatagaggaaccgaatcacat 10927085  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  10927084 cagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 10926985  T
Q  250 cttc 253  Q
    ||||    
T  10926984 cttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 71 - 254
Target Start/End: Complemental strand, 10927629 - 10927437
Alignment:
Q  71 cggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagagg 161  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||| |||         | |||||||||||||||||||||||||    
T  10927629 cggctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagcagctcccaacaacttatagaggaaccgaatcacatcggaatgagagg 10927530  T
Q  162 gatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| ||||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  10927529 gatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 10927437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 2193726 - 2193928
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          |||||||||||  |    
T  2193726 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgcc 2193824  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  2193825 ggaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 2193924  T
Q  251 ttct 254  Q
    ||||    
T  2193925 ttct 2193928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 27647073 - 27646869
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||| ||||| ||||| ||||||||||||||| | ||||||||| |||||||| ||||| ||||||||||||||          |||||||||||||    
T  27647073 atgtaacgcccacagctgacgagggcaggggagtggttgccggtgcacaaggcacgccaatgtgcggctcccgacagcttctagaggaaccgaatcacat 27646974  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||||||||  |||||||||| |||||| ||||||||||||| | ||||||| |||||||||||||||||||||||| |||||| ||||||    
T  27646973 cggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcat 27646874  T
Q  250 cttct 254  Q
    |||||    
T  27646873 cttct 27646869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 20039710 - 20039508
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| ||||| || ||||||||||| |||||| |||||||||| |||||||||||         |||||||||||||||    
T  20039710 tgtaacacccaaggctgacgagggc-ggggaatggtcgccggtgcacaaggcatgacaatgagcagctcccgacagcttctagacaaaccgaatcacatc 20039612  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||| |||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||     
T  20039611 ggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatt 20039512  T
Q  251 ttct 254  Q
    ||||    
T  20039511 ttct 20039508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 34867699 - 34867902
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| | |||||  ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  34867699 atgtaacacccaaggctgacgagggc-gaggagtagtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaagaaccgaatcacac 34867797  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  34867798 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 34867897  T
Q  250 cttct 254  Q
    |||||    
T  34867898 cttct 34867902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 39146849 - 39147051
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||| ||||         | ||| ||||||||||    
T  39146849 tgtaacacccaaggctgacgagggt-ggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaactgaatcacatc 39146947  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    | ||||||||||||| ||||||||||||| |||||||||||||||||||| | || |||| |||||||||||| |||||| ||||| ||||| |||||||    
T  39146948 gaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatc 39147047  T
Q  251 ttct 254  Q
    ||||    
T  39147048 ttct 39147051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 42788881 - 42788680
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||| ||| |||||||||| |||||         | |||||||||||| |    
T  42788881 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacaaca-tgagcggctctcgacaacttctagaggaaccgaatcacaac 42788784  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||| | || |||| ||||||||||||||||||||||||||||||| |||||||    
T  42788783 ggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatc 42788684  T
Q  251 ttct 254  Q
    ||||    
T  42788683 ttct 42788680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 17445606 - 17445489
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  17445606 aaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatat 17445507  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  17445506 caacaagatgcatcttct 17445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 21886383 - 21886180
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccg---------acagaaaccgaatcacat 149  Q
    |||||||||| | ||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||| |         | || ||||||||||||     
T  21886383 atgtaacaccgaaggctgatgagggc-ggagagtggtcgccggtgcacaaggcacgacaatgagcggctcctggtagcttctagaggaaccgaatcacac 21886285  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||  ||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  21886284 cggaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcat 21886185  T
Q  250 cttct 254  Q
    |||||    
T  21886184 cttct 21886180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 34371522 - 34371724
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          |||||||||||| |    
T  34371522 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacacc 34371620  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||  |||||||  || | ||||||| |||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||    
T  34371621 ggaatgagagggttcccaaggccgtacaggtgtgggactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatc 34371720  T
Q  251 ttct 254  Q
    ||||    
T  34371721 ttct 34371724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 34371977 - 34372180
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| |||||| |||||||||||||||| |||||          ||||||||||||     
T  34371977 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcaggacaatgagcggctcctgacagcttctagaggaaccgaatcacac 34372075  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | ||||||||||| |||  |||||||  |  |||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||||||    
T  34372076 cagaatgagagggttcccaaggccgtacaagtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcat 34372175  T
Q  250 cttct 254  Q
    |||||    
T  34372176 cttct 34372180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 15513250 - 15513046
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||| | |||||||| ||||||||||| ||||||||| |||||||||||||||||||          |||||||||||||    
T  15513250 atgtaacacccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagtttttagaggaaccgaatcacat 15513152  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatg--gaggcttacaagaattgtttggtactacctatatcaacaacatgc 247  Q
    |||||||||||||||| | |||| |||||| |||||||||||||||||||| |   | ||||| |||||||| ||||||||||| |||||||||| ||||    
T  15513151 cggaatgagagggatcattaggctgtgtaggtatgggactacatggttgaaggaatatgcttataagaattg-ttggtactaccaatatcaacaagatgc 15513053  T
Q  248 atcttct 254  Q
    |||||||    
T  15513052 atcttct 15513046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 22556530 - 22556648
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| | ||||||||||||||||||||||    
T  22556530 aaactgaatcacatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctata 22556629  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  22556630 tcaacaagatgcatcttct 22556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 189062 - 189180
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||  |  ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  189062 aaactgaatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 189161  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| ||| |||||||    
T  189162 tcaacaagatgtatcttct 189180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 8642181 - 8642068
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||| |||||||||||||||| |||||||| || ||||||||| |||||||||| | ||||||| ||||||| |||||||||||||||||||||    
T  8642181 gaatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaac 8642082  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  8642081 aagatgcatcttct 8642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 18304341 - 18304543
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| | |||| |||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||          |||| ||||||| |    
T  18304341 tgtaacacccaagactgacgaggac-ggggagtgatcgccggtgcacaagacacgacaatgagcggctcccgacagcttctagacgaaccaaatcacaac 18304439  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||| |||    | ||||| |  |||||||||||||||||||||||||||| ||||||     
T  18304440 ggaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcata 18304539  T
Q  251 ttct 254  Q
    ||||    
T  18304540 ttct 18304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 2474399 - 2474517
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| |||||| ||| |||  |||||||||||| |||||||||| | || |||| ||||||||||||||||||||||||    
T  2474399 aaactgaatcacatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctata 2474498  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  2474499 tcaacaagatgcatcttct 2474517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 8391475 - 8391356
Alignment:
Q  134 agaaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactaccta 233  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||| ||||| | || |||| ||||||||||||||||| |||     
T  8391475 agaaaccgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctg 8391377  T
Q  234 tatcaacaacatgcatcttct 254  Q
    ||||||||| |||||||||||    
T  8391376 tatcaacaagatgcatcttct 8391356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 3887209 - 3887091
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| ||||||||||||||  || ||||||||| |||||||||| | || |||| | ||||| ||||||||||||||||    
T  3887209 aaactgaatcacatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctata 3887110  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  3887109 tcaacaagatgcatcttct 3887091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 22556963 - 22557081
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| | || |||||||||| || ||||||||| |||||||||| | ||||||| | |||||||||||||||||| |||    
T  22556963 aaactgaatcacatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaata 22557062  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  22557063 tcaacaagatgcatcttct 22557081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 2473953 - 2474071
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||||||||||||||||||| ||| |||  ||  ||| |||| |||||||||| | ||||||| ||||||||||||||||| ||||||    
T  2473953 aaactgaatcacatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctata 2474052  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  2474053 tcaacaagatgcatcttct 2474071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 1821905 - 1822018
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||| ||||||||||||||| |||| | ||| |||| || |||| |||| |||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  1821905 gaattacatcggaatgagagagatcttaaggtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 1822004  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  1822005 aagatgcatcttct 1822018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 3886748 - 3886635
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||||||||||| |||  |  ||||||||| |||||| ||| | | ||||| | |||||||||||||||||||||||||||    
T  3886748 gaatcacatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaac 3886649  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  3886648 aagatgcatcttct 3886635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 30719957 - 30719839
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||||||||||||| ||||||||||||||||||||  ||| |  ||||||||  ||| |||||| | ||||||| | ||||||||||||||||||||||    
T  30719957 aaaccgaatcacatcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctata 30719858  T
Q  236 tcaacaacatgcatcttct 254  Q
      ||||| |||||||||||    
T  30719857 aaaacaagatgcatcttct 30719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 42429141 - 42429257
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggagg-cttacaagaattgtttggtactacctata 235  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||| ||  ||||||||||| ||||| |||| ||||||||||||||||||||| ||    
T  42429141 aaccgaatcacatcggaataagagg-atcctgagaccgtgtaggtatgtgaacacatggttgaa-ggaggacttataagaattgtttggtactaccttta 42429238  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||| ||||    
T  42429239 tcaacaatatgcatattct 42429257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 11160832 - 11160715
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||  ||||||||||||||||||| ||| | ||||||| ||||  ||||||| |||||| | ||||||| || ||||||||||||||| |||| |    
T  11160832 aaccgaattgcatcggaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgt 11160733  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||| ||||    
T  11160732 caacaagatgcatattct 11160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 22975162 - 22975076
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgttt 222  Q
    |||| |||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||   | ||||| |||||||||||    
T  22975162 aaactgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 30684708 - 30684590
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||| ||||||||||||||||| ||||||||||||  ||| |  ||||| ||  ||| |||||| ||||||||| | |||||||||||||||| |||||    
T  30684708 aaaccaaatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctata 30684609  T
Q  236 tcaacaacatgcatcttct 254  Q
      ||||| |||||||||||    
T  30684608 aaaacaagatgcatcttct 30684590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 2058808 - 2058696
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||||||||||||||||| |||||| |||||||| | | || || |||| ||||  ||| ||||| | || |||| | ||||||||||||||||||||||    
T  2058808 aaaccgaatcacatcggattgagagagatcctgaagtcatgcagctatgagactggatgattgaaggaagacttatatgaattgtttggtactacctata 2058709  T
Q  236 tcaacaacatgca 248  Q
    ||||||| |||||    
T  2058708 tcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 29680236 - 29680141
Alignment:
Q  152 gaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatct 251  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||| | ||||||| |||       ||||| ||||||||||||||| ||||||||    
T  29680236 gaatgagagagatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatct 29680144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 11757470 - 11757339
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacagaaaccgaatcacatcggaatgaga 159  Q
    ||||||||||| |||| | ||| ||||||| ||| ||||||||||| ||  |||||||||||| | ||||||| ||   |   |||||||||||||||||    
T  11757470 tgtaacacccatggctaacgagagcaggggtgtggtcgccggtgcacaaaacacgacaatgagtgactcccgaaagcttctagatcacatcggaatgaga 11757371  T
Q  160 gggatcctgaggccgtgtagatatgggactac 191  Q
    |||||||| | ||||||||| ||||| |||||    
T  11757370 gggatcctaaagccgtgtagctatggtactac 11757339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 4658144 - 4658027
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||| ||| ||||||||| |||  ||||| || |||| |||| |||||||||| | ||  ||| |||| ||||||| |||||||||||    
T  4658144 aaactgaatcacatcgaaataagagggatcttgaaaccgtgcaggtatgagacttcatggttgaacgaaga-ttataagacttgtttgatactacctata 4658046  T
Q  236 tcaacaacatgcatcttct 254  Q
     ||||||||||||||||||    
T  4658045 acaacaacatgcatcttct 4658027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 16370852 - 16370754
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    |||||||| |||||||||| |||||| ||| ||||| |||  |||| |||||||||| | |  |||| ||||||||||||||||||| |||||||||||    
T  16370852 tcacatcgaaatgagagggttcctgatgccatgtaggtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaa 16370754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 24182391 - 24182279
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||  |||||||||||||| ||||  |||| |  |||| ||| | ||||||||| | ||||||| ||||||| |||||||||| ||||| |||||    
T  24182391 aatcacattagaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaaca 24182292  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  24182291 agatgcatcttct 24182279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 4673591 - 4673505
Alignment:
Q  168 gaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||||||||||||| | |||||||| ||||| | || |||| ||||||| |||||||  |||| ||||||||| |||||| ||||    
T  4673591 gaggccgtgtagatatagaactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattct 4673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 18750328 - 18750230
Alignment:
Q  156 gagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||| |||||||| | |||| || | ||| ||| |||||||||| | ||| ||| || ||||||||||||||||||||| ||| || |||||||||||    
T  18750328 gagagagatcctgaagtcgtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttct 18750230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 39801531 - 39801498
Alignment:
Q  219 gtttggtactacctatatcaacaacatgcatctt 252  Q
    |||||||||||||||||||||||| |||||||||    
T  39801531 gtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 32574742 - 32574694
Alignment:
Q  204 aggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||||||| | ||||||||||||||||||||||  ||||| |||||||||    
T  32574742 aggcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 50398769 - 50398566
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||          || |||||||||||    
T  50398769 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacat 50398671  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  50398670 cggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 50398571  T
Q  250 cttct 254  Q
    |||||    
T  50398570 cttct 50398566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 4127669 - 4127465
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca----------gaaaccgaatcaca 148  Q
    |||||||||||| | |||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||          | ||||||||||||    
T  4127669 atgtaacacccaagactgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacaacttctaagaggaaccgaatcaca 4127571  T
Q  149 tcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgca 248  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| |||||| | || |||| ||||||||||||||||||||||||||||||| |||||    
T  4127570 tcggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgca 4127471  T
Q  249 tcttct 254  Q
    ||||||    
T  4127470 tcttct 4127465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 1645979 - 1645777
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||||    
T  1645979 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacatc 1645881  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||| | || |||| ||||||||||||||| ||||||||||||||| |||||||    
T  1645880 ggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatc 1645781  T
Q  251 ttct 254  Q
    ||||    
T  1645780 ttct 1645777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 12692229 - 12692027
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          |||||||||||| |    
T  12692229 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacacc 12692131  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  12692130 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 12692031  T
Q  251 ttct 254  Q
    ||||    
T  12692030 ttct 12692027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 4128121 - 4127917
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga----------aaccgaatcaca 148  Q
    |||||||||||| |||||| |||||| | |||||| ||||||||||| |||||||||||||||||||||||| ||||           || |||||||||    
T  4128121 atgtaacacccaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacagcttctaagaggaatcgaatcaca 4128023  T
Q  149 tcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgca 248  Q
    ||||||||||||||||||||||||| |||||  ||| ||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||    
T  4128022 tcggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgca 4127923  T
Q  249 tcttct 254  Q
    ||||||    
T  4127922 tcttct 4127917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 14572291 - 14572178
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  14572291 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 14572192  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  14572191 aagatgcatcttct 14572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 23943017 - 23942817
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac------agaaaccgaatcacatcgg 152  Q
    |||||||||| | || ||| |||||| |||||||| ||||||||||| |||||||||||||||||  ||  |  |      || ||||||||||||||||    
T  23943017 atgtaacacctaaggatgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagctcctgacagcttctagaggaaccgaatcacatcgg 23942919  T
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  23942918 aatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 23942819  T
Q  253 ct 254  Q
    ||    
T  23942818 ct 23942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 89 - 254
Target Start/End: Complemental strand, 53996317 - 53996143
Alignment:
Q  89 gagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagagggatcctgaggccgtgtag 179  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||         | ||||||||||||||||||||||| ||||||||||||  |||||    
T  53996317 gagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacaacttttagaggaaccgaatcacatcggaatgagaaggatcctgaggctatgtag 53996218  T
Q  180 atatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||||| || ||||||||    
T  53996217 atatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttct 53996143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 3169116 - 3169318
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| || ||| |||| | |||||||| || |||||||| ||| |||||||||||||| |||| |||||          ||||||||||||||    
T  3169116 tgtaacacccaaggttgacgaggac-ggggagtggtcaccggtgcacaagacacgacaatgagcgactcctgacagcttatagaggaaccgaatcacatc 3169214  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||| | || |||| || |||||||||||||||||||||||||||| |||||||    
T  3169215 ggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatc 3169314  T
Q  251 ttct 254  Q
    ||||    
T  3169315 ttct 3169318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 24629183 - 24629005
Alignment:
Q  88 ggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgta 178  Q
    |||||| ||||||||||| ||||||||||||||||||||||| |||||          |||||||||||| ||||||||||||| |||||||||||||||    
T  24629183 ggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttcttgaggaaccgaatcacaccggaatgagagggttcctgaggccgtgta 24629084  T
Q  179 gatatgggactacatggttgaatg---gaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    | ||||||||| ||||||| || |    ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  24629083 ggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 24629005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 21220562 - 21220359
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||||| || | ||| ||| ||||||| || | |||||| ||||||||||||||||||||||||| |||          ||||||||||||||    
T  21220562 tgtaacacccacgactaacgagagcatgggagtggtcactggtgcacaaggcacgacaatgagcggctcccggcagcttctagaggaaccgaatcacatc 21220463  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     |||||||||||||| ||||||| ||||| ||||  |||| ||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||    
T  21220462 agaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatc 21220363  T
Q  251 ttct 254  Q
    ||||    
T  21220362 ttct 21220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 50399136 - 50399021
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  50399136 ccgaatcacatcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatca 50399037  T
Q  239 acaacatgcatcttct 254  Q
    |||  |||||||||||    
T  50399036 acacgatgcatcttct 50399021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 51331424 - 51331309
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  51331424 ccgaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatca 51331325  T
Q  239 acaacatgcatcttct 254  Q
    |||| || ||||||||    
T  51331324 acaagatacatcttct 51331309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 9424088 - 9423886
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac-------aga--aaccgaatcacatc 150  Q
    |||||||||||| |  || |||||| |||||||| ||| ||||||| |||||||||||| ||| ||||||||||       |||  |||||||||||| |    
T  9424088 tgtaacacccacagaagacgagggc-ggggagtggtcgtcggtgcacaaggcacgacaaagagtggctcccgacgacttctagacgaaccgaatcacacc 9423990  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||| |||| |  ||||||||| |||||||||| | ||||||| || |||||||||||||||||||||||||||| |||||||    
T  9423989 ggaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatc 9423890  T
Q  251 ttct 254  Q
    ||||    
T  9423889 ttct 9423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 24629638 - 24629461
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||| |||||||| || ||||||||||||||||||||||  |||||          |||||||||||| ||||||||||||| |||||||| ||||    
T  24629638 ggggagtggtcgccggttcacaaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgaggtcgtg 24629539  T
Q  177 tagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| ||||||||| ||||||| || | | ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  24629538 taggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttct 24629461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 29628812 - 29628707
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| | || |||| |||||||||||||||||||||||||    
T  29628812 aaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatat 29628713  T
Q  237 caacaa 242  Q
    ||||||    
T  29628712 caacaa 29628707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 49998636 - 49998748
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||||||||||||||||| |||| ||||||  |||||||| |||||||||| | || |||| ||||||||||||||||||||||||||||||    
T  49998636 aatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 49998735  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  49998736 agatgcatcttct 49998748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 14571867 - 14571749
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||  ||||| ||||||| |||| |||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  14571867 aaactgaatcacatcataatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctata 14571768  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  14571767 tcaacaagatgcatcttct 14571749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 44471471 - 44471353
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| |||| |||||||||  || |||| ||||||||||||||| | || |||| ||||||||||||||||||||||||    
T  44471471 aaactgaatcacatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctata 44471372  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  44471371 tcaacaagatgcatcttct 44471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 35871622 - 35871735
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| | ||||||| | |||||||||||||| |||||||    
T  35871622 aaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctata 35871721  T
Q  236 tcaacaacatgcat 249  Q
    ||||||| ||||||    
T  35871722 tcaacaagatgcat 35871735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 23350429 - 23350311
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| |||| |||||||||  || || |||||| |||||||||| | ||||||| ||||||||||||||||| ||||||    
T  23350429 aaactgaatcacatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctata 23350330  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  23350329 tcaacaagatgcatcttct 23350311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 53855039 - 53854858
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||||  ||| |||| ||||| |||||| ||| ||| | ||||| |||||||||||||||||||||||          |||||||||||||    
T  53855039 atgtaacacccacgattgacgaggacagggaagtgattgccagtgtacaaggctcgacaatgagcggctcccgacagcttatagacgaaccgaatcacat 53854940  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacc 231  Q
    |||||||||||||||| ||| || |||||| |||| ||||| ||||||||| | || |||| ||||||||||||||||||||    
T  53854939 cggaatgagagggatcatgaagcagtgtaggtatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 14351705 - 14351907
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| ||||||| |||  |||| |||| | ||||||||| ||||||||||||||||||||||||||||          ||||||||||||| |    
T  14351705 tgtaacacccaaggctgataaggctaggg-agtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttctagacaaaccgaatcacacc 14351803  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     |||||||||||||||||||| |||| |  |||| | || |||||||||| | ||||||  |||| || |||||||||| |||||||||||| |||||||    
T  14351804 agaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatc 14351903  T
Q  251 ttct 254  Q
    ||||    
T  14351904 ttct 14351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 1464142 - 1464259
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||||| |||||||||||||| || | |||||||| |||| || ||||| |||||| | |  |||| |||||||||||||||||||||||||    
T  1464142 aaccgaatcacatcagaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatat 1464241  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  1464242 caacaagatgcatcttct 1464259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 8467945 - 8467828
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||| |||||| |||||| |||||||||||| | ||| || |||| ||||||||||||||| | || |||| ||||||||||||||||||||||||     
T  8467945 aaccgaaccacatcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatac 8467846  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  8467845 caacaagatgcatcttct 8467828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 7678746 - 7678650
Alignment:
Q  158 gagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||||| ||||||| ||||| |||||| ||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  7678746 gagggatcttgaggccttgtaggtatggggctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttct 7678650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 21067662 - 21067834
Alignment:
Q  75 tgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatc 165  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |         |||||||||||| | |||||   |  |||    
T  21067662 tgatgagggc-ggggagtggtcgccggtgcagaaggcacgacaatgagcggctcccgacaaattatagacgaaccgaatcacaccagaatg---gaaatc 21067757  T
Q  166 ctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    | ||||||||| || ||||||||| |||||||||| | || |||| |||||||||||||| ||||||||||||||||    
T  21067758 ccgaggccgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaa 21067834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 31817994 - 31817880
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||||||| ||||||||  ||||| | || |  ||||||||| |||||||||| | ||||||| |||||||||| ||||||||||||| |||    
T  31817994 cgaatcacatcggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaa 31817895  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  31817894 caagatgcatcttct 31817880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 44471020 - 44470902
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||| |||| ||| || ||  |  |||| ||||  ||||||||| | ||||||| ||||||||||||||||||||||||    
T  44471020 aaactgaatcacatcggaatgagagagatcatgacgctgtacaagtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctata 44470921  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  44470920 tcaacaagatgcatcttct 44470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 27026498 - 27026613
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||||||||||||| |||||||||||||  || | | ||| || |||||||||||| | ||||| | ||||||| |||||||||||| |||||||||||    
T  27026498 aaaccgaatcacatcagaatgagagggatattg-gacggtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctata 27026596  T
Q  236 tcaacaacatgcatctt 252  Q
    ||||||| |||||||||    
T  27026597 tcaacaagatgcatctt 27026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 17628513 - 17628623
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    ||||||| || |||||| ||||| |||||| || ||||| | || | |||||||||| | ||||||| |||||||||||||||||||||||| ||||||     
T  17628513 tcacatcagagtgagagagatcccgaggccatgcagataagtgatttcatggttgaaggtaggcttataagaattgtttggtactacctataccaacaag 17628612  T
Q  244 atgcatcttct 254  Q
    |||||||||||    
T  17628613 atgcatcttct 17628623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 15306243 - 15306119
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattg------tttggtacta 229  Q
    |||| ||| |||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||| | || |||| |||| |||      ||||||||||    
T  15306243 aaacagaaccacatcagaatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtacta 15306144  T
Q  230 cctatatcaacaacatgcatcttct 254  Q
    ||||||| ||||| |||||||||||    
T  15306143 cctatataaacaagatgcatcttct 15306119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 21067220 - 21067394
Alignment:
Q  89 gagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca-------ga--aaccgaatcacatcggaatgagagggatcctgaggccgtgtag 179  Q
    ||||| |||||| |||| ||||||||| ||||||||||||||||||       ||  || ||||||||| ||||||||||||||||| |||| |||| |     
T  21067220 gagtggtcgccgatgcacaaggcacgataatgagcggctcccgacaacttatagacgaatcgaatcacaccggaatgagagggatcccgaggtcgtgcat 21067319  T
Q  180 atatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
     |||| |||| |||||||||| | || || | || |||| ||||||||||| ||||||||||| |||||||||||    
T  21067320 gtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttct 21067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 41869918 - 41870030
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||| |||||||||||||||| | ||  | |||||||||| |||| ||||| | || |||| ||||||||| || |||||||||||||||||    
T  41869918 aatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaaca 41870017  T
Q  242 acatgcatcttct 254  Q
    | | |||||||||    
T  41870018 agacgcatcttct 41870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 27579055 - 27578952
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||||||||||||||||||| ||||||||| | | | ||||||| ||||  ||||| ||||||| || || |||| ||||||||||||||||||| ||||    
T  27579055 aaaccgaatcacatcggaataagagggatcttaaagtcgtgtaggtatgacactacttggttgactgaagacttataagaattgtttggtactacatata 27578956  T
Q  236 tcaa 239  Q
    ||||    
T  27578955 tcaa 27578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 45682209 - 45682315
Alignment:
Q  148 atcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgc 247  Q
    ||||||||||||| |||| ||||||| || | ||||||||||||||| ||||||| ||| ||| ||||||| ||||||| || ||||| |||||| ||||    
T  45682209 atcggaatgagagagatcttgaggccatgcatatatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgc 45682308  T
Q  248 atcttct 254  Q
    || ||||    
T  45682309 attttct 45682315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 17029324 - 17029437
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||| ||||||||||||||||||||  |||| |||| |  ||||||||| ||| |||||||| || |||  || |||||||| ||||||||||||    
T  17029324 aaactgaattacatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctata 17029423  T
Q  236 tcaacaacatgcat 249  Q
    ||||||| ||||||    
T  17029424 tcaacaagatgcat 17029437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 31817539 - 31817426
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||| ||| ||||||||| ||||| |||| |  |||| |||| |||||||||| | | | ||| || ||||||||||||||||||||| ||||    
T  31817539 gaatcacatcgaaataagagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaac 31817440  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  31817439 aaaatgcatcttct 31817426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 43929092 - 43928991
Alignment:
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    |||||||||| |||||| |||||| || |||| |||||  |||| ||| | | ||||||||||||||||||||||||| |||| |||||| |||||||||    
T  43929092 aatgagagggttcctgaagccgtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatctt 43928993  T
Q  253 ct 254  Q
    ||    
T  43928992 ct 43928991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 23976357 - 23976247
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    |||||||| |||||||||  ||||| |||| ||||| |||||| || |||| ||||| | ||  ||| ||||||||||||||||||||||||  |||||     
T  23976357 tcacatcgaaatgagaggtttcctggggccatgtaggtatgggtctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaag 23976258  T
Q  244 atgcatcttct 254  Q
    |||||||||||    
T  23976257 atgcatcttct 23976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 17028868 - 17028984
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggagg-cttacaagaattgtttggtactacctat 234  Q
    |||| ||||||||||||||||||||||||||||| ||| || |  ||||||||| ||| |||||| |||||  ||  |||||||||| ||| ||||||||    
T  17028868 aaactgaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaa-ggaggatttgtaagaattgttaggtgctacctat 17028966  T
Q  235 atcaacaacatgcatctt 252  Q
    |||||||| |||| ||||    
T  17028967 atcaacaagatgcgtctt 17028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 13266085 - 13266196
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||  |||||||||||||| | | |||||| || ||||||| | |||||||||| | ||||||| || |||| ||| ||||| ||||||||||     
T  13266085 gaatcacattagaatgagagggatcttaaagccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaat 13266184  T
Q  241 aacatgcatctt 252  Q
    || |||||||||    
T  13266185 aagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 23943383 - 23943270
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||  ||||| ||||||||||||| ||||||| ||||     ||||||||||| | || |||| || || | |||||||||||||||||    
T  23943383 aaccgaatcacatcaaaatgatagggatcctgagg-cgtgtaggtatg---tcacatggttgaaggaagacttataaaaaatatttggtactacctatat 23943288  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  23943287 caacaagatgcatcttct 23943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 42838628 - 42838733
Alignment:
Q  146 acatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacat 245  Q
    ||||| |||||||||| |||||||| | |||||  |||| |||||||| ||| || | || | || || |||||||||||||||||||||||||||| ||    
T  42838628 acatcagaatgagagg-atcctgagactgtgtaagtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaat 42838726  T
Q  246 gcatctt 252  Q
    |||||||    
T  42838727 gcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 20309665 - 20309600
Alignment:
Q  135 gaaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaa 200  Q
    ||||||||||||||||||||||||||||||| |||| |  || || |||| |||||||||||||||    
T  20309665 gaaaccgaatcacatcggaatgagagggatcatgagactttgcaggtatgtgactacatggttgaa 20309600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 20306239 - 20306191
Alignment:
Q  204 aggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  20306239 aggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 33764904 - 33764972
Alignment:
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||| ||| || |||  |||||||||||||| ||||||||| |||||| |||||||||||    
T  33764904 gactacatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttct 33764972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 13614043 - 13613925
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggagg-cttacaagaattgtttggtactacctat 234  Q
    |||||||||||||  |||||||||||||||| ||||  ||| |   ||| |||| |||||| ||| ||||  |||| |||||||||||| ||| ||||||    
T  13614043 aaaccgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaa-ggagtacttataagaattgtttgataccacctat 13613945  T
Q  235 atcaacaacatgcatcttct 254  Q
    |||||||| |||||||||||    
T  13613944 atcaacaagatgcatcttct 13613925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 27029272 - 27029389
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||||||| ||||| ||||||||||||| | | | || || ||  ||| ||||||| | ||||| | || |||| ||||||| ||||||||||| ||||    
T  27029272 aaaccgaattacatcagaatgagagggattcgg-gaccatgcaggaatgagactacacgattgaaggaagacttataagaattatttggtactacttata 27029370  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  27029371 tcaacaagatgcatcttct 27029389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 50814895 - 50814853
Alignment:
Q  212 aagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  50814895 aagaattgtttggtactatctatatcaacaagatgcatcttct 50814853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 10165949 - 10166022
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggctta 210  Q
    |||||||||||||||||||||||  |||| ||||||  || || ||||||||| ||| |||||||| |||||||    
T  10165949 aaccgaatcacatcggaatgagaaagatcatgaggcattgcaggtatgggactgcattgttgaatgaaggctta 10166022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 24271699 - 24271583
Alignment:
Q  136 aaaccgaat-cacatcggaatgagagggatcctgaggccgtgt--agatatgggactacatggttgaatggaggcttacaagaattgtttggtactacct 232  Q
    ||||||||| |||||||||||||||||| |||||||| |||||  || |||| |||||||||||| ||   || | || ||||||| |||| ||||||||    
T  24271699 aaaccgaattcacatcggaatgagagggttcctgaggtcgtgtgcaggtatgagactacatggttaaagtaagacatataagaattatttgatactacct 24271600  T
Q  233 atatcaacaacatgcat 249  Q
    |||  ||||| ||||||    
T  24271599 atacgaacaagatgcat 24271583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 26200425 - 26200313
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatg--gaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||| ||||||||||||||||||    |||||| ||||||||  |||||||||| |  |||||||| || ||||||||| ||||| |||||  ||||    
T  26200425 tcacatcagaatgagagggatcctgatattgtgtaggtatgggacatcatggttgaaggaagaggcttataacaattgtttgatactaactatacaaaca 26200326  T
Q  242 acatgcatcttct 254  Q
    | |||||| ||||    
T  26200325 agatgcatattct 26200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 27578546 - 27578485
Alignment:
Q  193 tggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||  || ||| ||||||| |||||| |||||||||||||||| |||||||||||    
T  27578546 tggttgaatgatggtttataagaattatttggtgctacctatatcaacaagatgcatcttct 27578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 44830994 - 44831088
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactaccta 233  Q
    ||||||||||||||||||||||||| |  || | |||  |||  |||| || |||||||||||| ||| ||||| || |||||||||||||||||||    
T  44830994 aaccgaatcacatcggaatgagaggaa--ctcatgccacgtaagtatgagattacatggttgaagggaagcttataaaaattgtttggtactaccta 44831088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 35477802 - 35477837
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||||||||||||||| |||||||||||||||    
T  35477802 gaatcacatcggaatgagagagatcctgaggccgtg 35477837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 17628971 - 17629061
Alignment:
Q  145 cacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||||| ||||||| |||||||| ||| |||| || |||| || |  ||||||||||  |  |||| ||||||||||||||||||||||||    
T  17628971 cacatcagaatgagtgggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttataagaattgtttggtactacctata 17629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 33987217 - 33987160
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacat 193  Q
    |||| ||||||||||||||||||||||||| ||||  |||| || |||| ||||||||    
T  33987217 aaactgaatcacatcggaatgagagggatcatgagatcgtgcaggtatgtgactacat 33987160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 39902518 - 39902481
Alignment:
Q  217 ttgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttct 39902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 23091578 - 23091534
Alignment:
Q  215 aattgtttggtactacctatatcaacaacatgcatcttctctctg 259  Q
    |||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  23091578 aattgtttggtactacatatattaacaagatgcatcttctttctg 23091534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 51331509 - 51331442
Alignment:
Q  62 taacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctccc 130  Q
    ||||||||| ||||||||||||| |||||||| | | ||||||| |||||| || ||||||||| ||||    
T  51331509 taacacccaaggctgatgagggc-ggggagtggttgtcggtgcacaaggcatgataatgagcggttccc 51331442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 254
Target Start/End: Original strand, 3652398 - 3652598
Alignment:
Q  62 taacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcgg 152  Q
    ||||||||| ||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||||||          ||||||||||||||||    
T  3652398 taacacccaaggctgatgagggc-ggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcgg 3652496  T
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| | ||||||| ||||||||| || |||||||||||||||||| |||||||||    
T  3652497 aatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatctt 3652596  T
Q  253 ct 254  Q
    ||    
T  3652597 ct 3652598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 6331149 - 6330946
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacat 149  Q
    |||||||||||| |||||| |||||  |||||||| ||||||||||| |||||| |||||||||||||||||||||          || |||||||||||    
T  6331149 atgtaacacccaaggctgacgagggt-ggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacat 6331051  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||||| | || |||| ||||||||||||||||||||||||||||||| ||||||    
T  6331050 cggaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcat 6330951  T
Q  250 cttct 254  Q
    |||||    
T  6330950 cttct 6330946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 23986541 - 23986351
Alignment:
Q  72 ggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagaggg 162  Q
    |||||| |||||| |||||||| ||| ||||||| |||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  23986541 ggctgacgagggc-ggggagtggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcggaatgagaggg 23986443  T
Q  163 atcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| |||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  23986442 atccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttct 23986351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 2681452 - 2681250
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| |||||||| || ||||||||||||||||||||||| |||||          |||||||||||| |    
T  2681452 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtacacaaggcacgacaatgagcggctcctgacagtttctagaggaaccgaatcacacc 2681354  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||||||||||||||| | ||||||| |||||||||||| || |||| |||||||||||||||||||| |||||||||| |||||||    
T  2681353 ggaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatc 2681254  T
Q  251 ttct 254  Q
    ||||    
T  2681253 ttct 2681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 20896924 - 20896722
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||| | || ||||| |||||| |||| |||||| |||||||||||||||||||||          || ||||||||||||    
T  20896924 tgtaacacccaaggctgacgaggac-ggagagtggtcgccgttgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatc 20896826  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  20896825 ggaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 20896726  T
Q  251 ttct 254  Q
    ||||    
T  20896725 ttct 20896722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 20850231 - 20850433
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| | |||||| ||||||||||| ||||||||||||||||||||||| |||||          |||||||||||| |    
T  20850231 tgtaacacccaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacacc 20850329  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| || |||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  20850330 ggaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatc 20850429  T
Q  251 ttct 254  Q
    ||||    
T  20850430 ttct 20850433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 14771955 - 14771765
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||          || ||||||||  |    
T  14771955 tgtaacacccacggctgacgagggcaggg-agtgatcgccggtgcgcaaggcacgacaatgagcgactcccgacagcttcttgatgaagcgaatcacgcc 14771857  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    |||||||||||||||| || ||||||||| |||| |||| |||||||||| | || |||| |||||||||||||||||||||||||||||||    
T  14771856 ggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaa 14771765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 20126418 - 20126216
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| ||| || |||||| |||||||| ||||||||||| |||||| |||||||||||||||| ||||          || | ||||||||||    
T  20126418 tgtaacacccaaggccgacgagggc-ggggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacaacttctagacaagctgaatcacatc 20126320  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||| |||| |||||| |||| ||||||||||||||| | ||||||| |||||| ||||| |||||||||||||||||| |||||||    
T  20126319 ggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatc 20126220  T
Q  251 ttct 254  Q
    ||||    
T  20126219 ttct 20126216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 17027677 - 17027565
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  17027677 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17027578  T
Q  242 acatgcatcttct 254  Q
    | || ||||||||    
T  17027577 agattcatcttct 17027565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 16519962 - 16520080
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||| | |||||||  ||| |||||||||||||||||||    
T  16519962 aaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctata 16520061  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  16520062 tcaacaagatgcatcttct 16520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 31821846 - 31821728
Alignment:
Q  134 agaaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactaccta 233  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||| | | ||||| ||||||| |||||||||| |||    
T  31821846 agaaaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaacta 31821747  T
Q  234 tatcaacaacatgcatctt 252  Q
    ||||||||| |||||||||    
T  31821746 tatcaacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 11062221 - 11062397
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtg 176  Q
    |||||||| || |||||||| |||||||||||||||||||||||||||||          |||||||||||||||  |||||||| |||||||||| |||    
T  11062221 ggggagtggtcaccggtgcacaaggcacgacaatgagcggctcccgacagtttctagaggaaccgaatcacatcgacatgagagg-atcctgaggctgtg 11062319  T
Q  177 tagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| ||||  |||||||||||||| | ||||||| ||||| ||||| ||||||||||||||||||| |||||||||||    
T  11062320 taggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttct 11062397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 3652888 - 3653047
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| | |||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          |||||| ||||||    
T  3652888 atgtaacacccaagactgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagatgaaccgactcacat 3652986  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggctta 210  Q
    ||||||||||||||||||||||| |||||| ||||||||| |||||||||| | |||||||    
T  3652987 cggaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaacgaaggctta 3653047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 13191659 - 13191547
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||||||||||||||||| || |  ||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  13191659 aatcacatcggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 13191560  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  13191559 agatgcatcttct 13191547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 7911872 - 7911990
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||  ||||||||| || ||| ||||| |||||||||| | |  |||| ||||||||||||||||||||||||    
T  7911872 aaactgaatcacatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctata 7911971  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  7911972 tcaacaagatgcatcttct 7911990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 13492783 - 13492901
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||| |||||||||||| |||||||||||| ||| || |||| |||| |||||||||| | ||||||| || |||||||||||||||||||||    
T  13492783 aaactgaatcatatcggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctata 13492882  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  13492883 tcaacaagatgcatcttct 13492901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17731260 - 17731159
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||||||  || ||||||||| ||||||| || | || |||| |||||||||||||||||||||||||||||    
T  17731260 gaatcacatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaac 17731161  T
Q  241 aa 242  Q
    ||    
T  17731160 aa 17731159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 23776440 - 23776553
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||  |||||||||||| ||||||||||| ||||| |||||||||||||||||||| | || |||| |||||| || |||||||||||||||||||    
T  23776440 gaatcacgccggaatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaac 23776539  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  23776540 aagatgcatcttct 23776553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 9352062 - 9352174
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| ||| |||| |||| || | |||||||||||||||||||| ||||    
T  9352062 aatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaaca 9352161  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  9352162 agatgcatcttct 9352174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 9440459 - 9440343
Alignment:
Q  138 accgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatc 237  Q
    |||||||||||||||||||||||||||||||| | |||| || ||||| ||| |||||||||||| | ||||| |||||||||| |||||||| ||||||    
T  9440459 accgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatc 9440360  T
Q  238 aacaacatgcatcttct 254  Q
    ||||| |||||| ||||    
T  9440359 aacaagatgcattttct 9440343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 21311880 - 21312083
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| ||| |||| ||||| ||||| ||||||| |||||||||| ||||||| ||          ||| ||||||||     
T  21311880 atgtaacacccaaggctgacgagggc-gggaagtggtcgccagtgcacaaggcacaacaatgagcgactcccgatagcttctaaaggaactgaatcacac 21311978  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | ||||||||||| || |||||| ||| || |||| |||| |||||||||| | ||||||| |||||||||| |||||||||||||||||||| ||||||    
T  21311979 cagaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcat 21312078  T
Q  250 cttct 254  Q
    |||||    
T  21312079 cttct 21312083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 9440580 - 9440485
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacc 231  Q
    |||| ||||||||||||||||||||||||||||| | |||| || ||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  9440580 aaactgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 7912304 - 7912422
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||  ||||||||| || ||||||||| |||||||||| | |  |||| | ||||||||||||||||||||||    
T  7912304 aaactgaatcacatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctata 7912403  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||| ||||    
T  7912404 tcaacaagatgcattttct 7912422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 15929580 - 15929694
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    ||||||||||| |||| |||| |||||| | ||| ||||  ||| |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  15929580 cgaatcacatcagaataagagagatcctaatgccttgtatgtattggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaa 15929679  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  15929680 caaaatgcatcttct 15929694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 17851369 - 17851486
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| ||||||||||||||||| ||||||||| |  ||||||||| ||||||| || | ||||||| ||||  ||||||||||||||| |||    
T  17851369 aaccgaatcacaccggaatgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttat 17851468  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  17851469 caacaagatgcatcttct 17851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 21311424 - 21311627
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||||||||||  ||||||  |||||| ||||||||||| |||| ||||||||||| || || ||| ||         ||| |||||||||||    
T  21311424 tgtaacacccacggctgacaagggcataggagtggtcgccggtgcacaaggaacgacaatgagaggttctcgaaagcttctagagaaaacgaatcacatc 21311523  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| || |||||||||  |  ||||||||| |||||||||| | || |||| ||||||||||||||| |||||| || ||||| || ||||    
T  21311524 ggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatc 21311623  T
Q  251 ttct 254  Q
    ||||    
T  21311624 ttct 21311627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 2891074 - 2890873
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga--------aaccgaatcacatc 150  Q
    |||||||||||| |||||| |||||||||| | || | ||||||||| ||| ||||||||||||||||||| |||||         || ||||||||||     
T  2891074 atgtaacacccaaggctgacgagggcaggg-actggttgccggtgcacaagccacgacaatgagcggctcctgacagttctagaggaatcgaatcacatt 2890976  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     |||||||||| |||| ||||||||| || ||||||||| |||||||||| | ||| ||| |||||||||| || |||||||||||||| || |||| ||    
T  2890975 agaatgagagg-atcccgaggccgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttc 2890877  T
Q  251 ttct 254  Q
    ||||    
T  2890876 ttct 2890873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 27334103 - 27334273
Alignment:
Q  93 gatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatat 183  Q
    ||||||||||||| ||||||||||||||| || ||||| ||||          ||| |||||||| ||||| ||||||| |||||||| |||| || |||    
T  27334103 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27334202  T
Q  184 gggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    || ||| |||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  27334203 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 27394843 - 27395013
Alignment:
Q  93 gatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatat 183  Q
    ||||||||||||| ||||||||||||||| || ||||| ||||          ||| |||||||| ||||| ||||||| |||||||| |||| || |||    
T  27394843 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27394942  T
Q  184 gggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    || ||| |||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  27394943 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27395013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 259
Target Start/End: Original strand, 17850857 - 17851035
Alignment:
Q  90 agtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca-------ga--aaccgaatcacatcggaatgagagggatcctgaggccgtgtaga 180  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||||||       ||  |||||||||||| |||||||||||||||||||||| |||| |      
T  17850857 agtggtcgccggtgcacaaggcacgacaattagcggcttccgacaacttctagacgaaccgaatcacaccggaatgagagggatcctgaggtcgtgcaag 17850956  T
Q  181 tatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctctctg 259  Q
    ||||||||| ||||||| || | | ||| | ||||  ||||||||||||||| ||||||||| ||||||||||| ||||    
T  17850957 tatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcatcttctttctg 17851035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 28065982 - 28065874
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||  ||| ||||||| | ||||| |||||||||||||||||| || |||||||||     
T  28065982 tcacatcggaatgagagggatcctaaggtcgtgtagaaatgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaag 28065883  T
Q  244 atgcatctt 252  Q
    |||||||||    
T  28065882 atgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 2720800 - 2720610
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||| | |||||| |||||| |||||||| ||||||||||| ||| |||||||||||||| || | |||||          |||| ||||| | |    
T  2720800 tgtaacacctaaggctgacgagggc-ggggagtggtcgccggtgcacaagtcacgacaatgagcgacttcggacagcttctagacgaaccaaatcatacc 2720702  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    ||||||||||||||||  ||| |||| || |||| |||| |||||||||| | || |||| ||||||||||||||||||||||||| |||||    
T  2720701 ggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaa 2720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 254
Target Start/End: Original strand, 20735696 - 20735807
Alignment:
Q  143 atcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    ||||||||  ||||||||||||| |||| | |||||| |||| ||||||||| ||| | | ||||||| |||||||||||| |||||| |||||||||||    
T  20735696 atcacatcataatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaa 20735795  T
Q  243 catgcatcttct 254  Q
     |||||||||||    
T  20735796 gatgcatcttct 20735807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 32292887 - 32292995
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    |||||| ||||||||||  ||||| ||  |||| || |||| |||| |||||||||||| ||||||| |||||||||||||||||||||||| ||||||     
T  32292887 tcacattggaatgagagaaatccttagatcgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaa 32292986  T
Q  244 atgcatctt 252  Q
    || ||||||    
T  32292987 atacatctt 32292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 15929194 - 15929311
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| |  ||| ||| ||||||||||||||| ||| |||| ||||||| |||||||   | ||||| ||||||||||||||| | |||||||    
T  15929194 aaccgaatcacaacataataagatggatcctgaggccgtttaggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatat 15929293  T
Q  237 caacaacatgcatcttct 254  Q
    ||| || |||||| ||||    
T  15929294 caataagatgcatattct 15929311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 33775240 - 33775050
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag---------aaaccgaatcacatc 150  Q
    ||||||||||| || |||||||| ||||  |||| ||| ||||||| ||||||||| ||||||| |||||| ||||         ||| |||||||||      
T  33775240 tgtaacacccaaggttgatgaggacaggt-agtggtcgtcggtgcacaaggcacgataatgagcagctcccaacagtttctacacaaaacgaatcacact 33775142  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaa 242  Q
    |||||||||| ||||  ||||||||| |  |||| |||  |||||||||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  33775141 ggaatgagagtgatcgcgaggccgtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaa 33775050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 1991592 - 1991665
Alignment:
Q  181 tatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| ||||||||||||| | | ||||||||||||||||||||||| ||| ||| | ||||| |||||||||||    
T  1991592 tatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttct 1991665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 9441061 - 9441135
Alignment:
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtac 227  Q
    ||||||||| ||||| | |||||| ||||||| ||||||||| ||||| | | ||||| ||||||||||||||||    
T  9441061 aatgagaggaatcctaaagccgtgcagatatgtgactacatgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 12194324 - 12194440
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||||||||||||| ||||||||||| |||||||| ||||| |||||| | ||| |||| |||||   || |||| || | || ||||| |||| |||||    
T  12194324 aaaccgaatcacattggaatgagaggaatcctgagaccgtgcagatat-gaactgcatgattgaagaaagacttataa-atttttttggcactatctata 12194421  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  12194422 tcaacaagatgcatcttct 12194440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 13492394 - 13492444
Alignment:
Q  204 aggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||| || ||||||||||||||| |||||||||||    
T  13492394 aggcttataagaattgtttgatattacctatatcaacaagatgcatcttct 13492444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 20732617 - 20732690
Alignment:
Q  181 tatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| ||||||||||||| | | ||||||| ||||||| ||||||||||||||||| || || |||||| ||||    
T  20732617 tatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattct 20732690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 9440963 - 9440891
Alignment:
Q  182 atgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| |||||||||||||| | | ||||| ||||||| ||||||||||| | ||||||||| |||||| ||||    
T  9440963 atggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttct 9440891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 17205337 - 17205449
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||||||| ||||||||  |||| || ||  | ||||  ||| |||| ||||||| ||  ||| ||||||||||||||||||||| || |||    
T  17205337 cgaatcacatcggaattagagggattttgagaccatggtggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaa 17205436  T
Q  240 caacatgcatctt 252  Q
    ||| || ||||||    
T  17205437 caagattcatctt 17205449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 28583013 - 28583071
Alignment:
Q  192 atggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||| ||||||| ||||||| |||| ||| | |||||||||||| |||||||    
T  28583013 atggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 10964369 - 10964401
Alignment:
Q  207 cttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||||||||||||||| ||||||||    
T  10964369 cttacaagaattgtttggtactacatatatcaa 10964401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 252
Target Start/End: Complemental strand, 27022574 - 27022374
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||| ||||| |||||| |||| | |||||||| ||||||||||| |||||||||||||||||||||||||||||          | ||||||||||||    
T  27022574 tgtaatacccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggagccgaatcacatc 27022476  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27022475 ggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatc 27022376  T
Q  251 tt 252  Q
    ||    
T  27022375 tt 27022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 10844792 - 10844995
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  10844792 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 10844890  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||||||    
T  10844891 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 10844990  T
Q  250 cttct 254  Q
    |||||    
T  10844991 cttct 10844995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 55 - 254
Target Start/End: Complemental strand, 12827495 - 12827288
Alignment:
Q  55 aacgatgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac-------agaa--accgaatc 145  Q
    |||| ||||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||| |||       ||||  ||||||||    
T  12827495 aacgttgtaacacccaaggctgacgagggt-ggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgactgcttctagaagaaccgaatc 12827397  T
Q  146 acatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacat 245  Q
    ||  |||||||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||| |||||||||| |||||||||||||||||||| ||    
T  12827396 acgccggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 12827297  T
Q  246 gcatcttct 254  Q
    |||||||||    
T  12827296 gcatcttct 12827288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 22026289 - 22026491
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| | |||||| ||||||||||| |||||| |||||||||||||||| |||||          |||||||||||| |    
T  22026289 tgtaacacccaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacagcttctagaggaaccgaatcacacc 22026387  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| || |||||||||| || ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  22026388 ggaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 22026487  T
Q  251 ttct 254  Q
    ||||    
T  22026488 ttct 22026491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 27925808 - 27926011
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||| | |||||||| |||| |||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  27925808 atgtaacacccaaggctgacgaggac-ggggagtggtcgctggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 27925906  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  27925907 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcat 27926006  T
Q  250 cttct 254  Q
    |||||    
T  27926007 cttct 27926011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 32292306 - 32292509
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||          ||||||||||||     
T  32292306 atgtaacacccaaggctgacgagggc-ggggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgatagtttctagaggaaccgaatcacac 32292404  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| |  ||||||||| |||||||||| | | ||||| |||||||||||||||||| ||||||||||||  |||||    
T  32292405 cggaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcat 32292504  T
Q  250 cttct 254  Q
    |||||    
T  32292505 cttct 32292509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 6465147 - 6464944
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||||||| |||| |||||| | |||||| ||||||||||| ||||||||| |||||||||||||| |||         | || ||||||||||    
T  6465147 atgtaacacccacgtctgacgagggc-gaggagtggtcgccggtgcacaaggcacgataatgagcggctcccaacaacttctagagtaatcgaatcacat 6465049  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
     ||||||||||| ||| ||||||||||||| ||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6465048 tggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 6464949  T
Q  250 cttct 254  Q
     ||||    
T  6464948 tttct 6464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 8080578 - 8080376
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| | |||||| ||||||||||| ||||||||||||||||||||||   ||||          ||| ||||||||||    
T  8080578 tgtaacacccaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaatgagcggctcttaacagcttctagaggaactgaatcacatc 8080480  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| | | ||| | ||||||||||||||||||||||||||||||| ||||||     
T  8080479 ggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcatt 8080380  T
Q  251 ttct 254  Q
    ||||    
T  8080379 ttct 8080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 22549231 - 22549029
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          |||||||||||| |    
T  22549231 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacacc 22549133  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||  ||||||||| ||| || |||| |||| |||||||||| | || |||| ||||||||||||||||||||||||||||||| |||||||    
T  22549132 ggaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 22549033  T
Q  251 ttct 254  Q
    ||||    
T  22549032 ttct 22549029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 22840766 - 22840563
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||||| ||||||  ||||| |||||||| ||||||||||| ||| ||||| |||||||||||||||| |         | ||| |||||||||    
T  22840766 atgtaacacccaaggctgacaagggc-ggggagtggtcgccggtgcataagacacgataatgagcggctcccgataacttctagagtaactgaatcacat 22840668  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||| ||||| || |||| |||||||||||||||||| |||||||||||| ||||||    
T  22840667 cggaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcat 22840568  T
Q  250 cttct 254  Q
    |||||    
T  22840567 cttct 22840563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 41659340 - 41659139
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||| | |||||| |||||| |||||||| ||||||||||| ||| |||||||||||| ||||||||||||          |||||||||||| |    
T  41659340 tgtaacacctaaggctgacgagggc-ggggagtggtcgccggtgcacaag-cacgacaatgagtggctcccgacagcttctagaggaaccgaatcacacc 41659243  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||||| | |||| || ||||||||| |||||||||| | || |||| ||||||||||||||||||||||||||||||| |||||||    
T  41659242 ggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 41659143  T
Q  251 ttct 254  Q
    ||||    
T  41659142 ttct 41659139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 2044057 - 2044170
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| | ||||||| |||||||||||| ||||||||||||||||    
T  2044057 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaac 2044156  T
Q  241 aacatgcatcttct 254  Q
    || |||||| ||||    
T  2044157 aagatgcattttct 2044170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 22548786 - 22548583
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| ||||||||||||  |||||||| ||||| ||||| ||||||| ||||||||||||||| |||||          |||| |||||||     
T  22548786 atgtaacacccaaggctgatgagggt-ggggagtggtcgccagtgcacaaggcactacaatgagcggctcctgacagcttctagaggaacctaatcacac 22548688  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||| ||| || |||| |||| |||||||||| | ||  ||| ||||||||||||||||||||||||||||||| ||||||    
T  22548687 cggaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcat 22548588  T
Q  250 cttct 254  Q
    |||||    
T  22548587 cttct 22548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 27022094 - 27021913
Alignment:
Q  86 ggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcgga----atgagagggatcctgaggc 172  Q
    |||||||| |||| |||||| |||||||||||||||| |||||||||||         | | |||||||||||||||    |||||||||||||||||||    
T  27022094 ggggagtggtcgcgggtgcacaaggcacgacaatgagtggctcccgacaacttctagaggagccgaatcacatcggaatgaatgagagggatcctgaggc 27021995  T
Q  173 cgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    | ||||| |||  |||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  27021994 catgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttct 27021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 28453249 - 28453450
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca-------gaa-accgaatcacatcg 151  Q
    ||||||||||| |||||| |||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||       ||  || |||||||| ||    
T  28453249 tgtaacacccaaggctgacgagggc-ggggagtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttttagatgactgaatcacaccg 28453347  T
Q  152 gaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatct 251  Q
    ||||||||||||||| |||| |||| || |||| |||| |||||||||| | |  |||| |||||||||||  |||||||||||| ||||| ||||||||    
T  28453348 gaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatct 28453447  T
Q  252 tct 254  Q
    |||    
T  28453448 tct 28453450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 89 - 254
Target Start/End: Complemental strand, 28375262 - 28375088
Alignment:
Q  89 gagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgtag 179  Q
    ||||| ||| ||||||| ||||||||||||| |||||||||||||||          || ||||||||| |  |||||||||||||||||||||||| ||    
T  28375262 gagtggtcgtcggtgcacaaggcacgacaattagcggctcccgacagcttctagacgaaacgaatcacaccataatgagagggatcctgaggccgtgcag 28375163  T
Q  180 atatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
     |||| |||| |||| ||||| | ||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  28375162 gtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttct 28375088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 10844765 - 10844649
Alignment:
Q  138 accgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatc 237  Q
    |||||| |||| ||||||||||||| |||||||||| || || ||||||||| |||||||||| | ||||||| |||| ||||||||||||||||||||     
T  10844765 accgaaccacaccggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatatt 10844666  T
Q  238 aacaacatgcatcttct 254  Q
    ||||| |||||||||||    
T  10844665 aacaagatgcatcttct 10844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 25147536 - 25147648
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||||||||||||| |||||| || | |||||| |||| |||| |||||||||| | ||||||| |||||||||||||| |||||||||||||||    
T  25147536 aatcacatcggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaaca 25147635  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  25147636 agatgcatcttct 25147648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 34308631 - 34308513
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||||||||| |||||||||||||||||  |  |||| ||||  ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  34308631 aaactgaatcacatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctata 34308532  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  34308531 tcaacaagatgcatcttct 34308513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 22705181 - 22705282
Alignment:
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||| ||||||||| |||||||||  ||| ||||| | ||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T
Q  251 tt 252  Q
    ||    
T  22705281 tt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 33852494 - 33852292
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||||| |||||| ||||||  | ||||| ||||||||||| |||||||||||||||||||||||||| |         | ||| ||||||||     
T  33852494 atgtaacacccaaggctgacgagggc--gtgagtggtcgccggtgcacaaggcacgacaatgagcggctcccgataacttcaagaggaactgaatcacac 33852397  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | ||||||||||||||| ||| ||||| || |||| ||||  ||||||||| | |  |||| ||||||||||||||||||||||||| ||||| ||| ||    
T  33852396 cagaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtat 33852297  T
Q  250 cttct 254  Q
    |||||    
T  33852296 cttct 33852292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 27819398 - 27819280
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||||||||||||| |||||||||||||| ||| | | || |  |||| |||| |||||||||| | ||||| | ||||||||||||||||||||||||    
T  27819398 aaaccgaatcacatcagaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctata 27819299  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  27819298 tcaacaaaatgcatcttct 27819280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 17103086 - 17103193
Alignment:
Q  147 catcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatg 246  Q
    |||||||||||||| ||||||||||||||  || |||| |||| |||||||||| | || |||| ||||||||||||||||| |||||||||||||  ||    
T  17103086 catcggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctg 17103185  T
Q  247 catcttct 254  Q
    ||||||||    
T  17103186 catcttct 17103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 25144766 - 25144884
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||| ||||||||| ||||  |||| |||| || ||||||| | |||| ||||| | ||||||| ||||||||||||||||||||||||    
T  25144766 aaactgaatcacatcagaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctata 25144865  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||| ||| |||||||||||    
T  25144866 tcagcaagatgcatcttct 25144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 21316256 - 21316147
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||  |||||||||||||| |||||||| || |||| ||||  |||||| ||||   ||||| |||||||||||||||||||||||||||||    
T  21316256 gaatcacatcgcgatgagagggatcctaaggccgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaac 21316157  T
Q  241 aacatgcatc 250  Q
    || |||||||    
T  21316156 aagatgcatc 21316147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 34309091 - 34308969
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacc---- 231  Q
    |||| |||||||||||||||||||||||||||||||||||  |  |||| ||||  ||||||||| | ||||||| ||||| ||||||||||||||        
T  34309091 aaactgaatcacatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctata 34308992  T
Q  232 tatatcaacaacatgcatcttct 254  Q
    ||||||||||| |||||||||||    
T  34308991 tatatcaacaagatgcatcttct 34308969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 12100686 - 12100803
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||| ||||||| | |||||||||||||  || |||| |||| |||||||||| | | ||||| |||| |||||||||||||||||||    
T  12100686 aaactgaatcacatcgaaatgagaag-atcctgaggccgtacaggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctata 12100784  T
Q  236 tcaacaacatgcatcttct 254  Q
    |||| || |||||||||||    
T  12100785 tcaataagatgcatcttct 12100803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 25147961 - 25148079
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||  ||||||||||||||| |||| ||||||| |||||||||   | |||||| | ||||||| ||||||||||||||  ||||||||    
T  25147961 aaactgaatcacataagaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctata 25148060  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||| ||||    
T  25148061 tcaacaagatgcatattct 25148079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 29971548 - 29971450
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||| ||||  || ||||||||||||||||||| |||| ||||||||||||||| | ||  ||| |||||||||||| ||||| |||||||||    
T  29971548 gaatcacatcagaattggaaggatcctgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 30335056 - 30334942
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||||||| ||| |||||||||| | ||| || |||| |||| || ||||||| | || |||| || ||||||||| ||||||||||| |||    
T  30335056 cgaatcacatcggaattagatggatcctgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaa 30334957  T
Q  240 caacatgcatcttct 254  Q
    ||| || ||||||||    
T  30334956 caagatacatcttct 30334942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 41912996 - 41913082
Alignment:
Q  168 gaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||| || || ||||||||| |||| ||||| | ||||||| |||||||||||||| |||||||||||||||| |||| ||||||    
T  41912996 gaggccatgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttct 41913082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 6466705 - 6466820
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||| ||||| ||| ||||||||||||| ||||| | |||  | ||||| ||| ||||||| || |||| |||| || |||||||||||||||||||||    
T  6466705 aaaccaaatcatatcagaatgagagggattctgagactgtgcgggtatggaactgcatggttaaa-ggagacttataaaaattgtttggtactacctata 6466803  T
Q  236 tcaacaacatgcatctt 252  Q
     |||||| |||||||||    
T  6466804 ccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 3744663 - 3744750
Alignment:
Q  167 tgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||| ||||||| ||||||||| |||||||||| | || |||| ||||||||||||  |||||||||| |||||| ||||| |||||    
T  3744663 tgaggtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttct 3744750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 17429501 - 17429611
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||||||||||| ||| |||| ||||| | ||||| |||| ||| |||||| | || ||||  || ||| ||||||||||||||||||||||    
T  17429501 aatcacatcggaatgagagg-atcttgagaccgtgcatatatgtgactgcattgttgaaggaagacttatgagtattatttggtactacctatatcaaca 17429599  T
Q  242 acatgcatcttc 253  Q
    | ||| ||||||    
T  17429600 agatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 3745104 - 3745213
Alignment:
Q  145 cacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaaca 244  Q
    ||||||| ||||||||||||||| ||| |||| ||     |||||||||||||||| | |  |||| ||||| ||||| |||||||||||| |||||| |    
T  3745104 cacatcgaaatgagagggatcctaaggtcgtgcaggctaaggactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaata 3745203  T
Q  245 tgcatcttct 254  Q
    ||||||||||    
T  3745204 tgcatcttct 3745213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 15568139 - 15568041
Alignment:
Q  154 atgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||||||| ||||||||| ||||  | ||||| |||| | |||||||| | || |||| || ||||||||||||  |||||||||||||| |||||||||    
T  15568139 atgagagagatcctgagaccgtacaaatatgtgacttcttggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 15819113 - 15819049
Alignment:
Q  190 acatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||| | | ||||| || |||||||||||||||| ||||||||||  |||||||||||    
T  15819113 acatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttct 15819049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 9250996 - 9251057
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttg 198  Q
    ||||||||||||||| |||||||||||||||||| ||| |  || ||||||||| ||||||||    
T  9250996 aaaccgaatcacatcagaatgagagggatcctgaagcc-tagaggtatgggactgcatggttg 9251057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 44041884 - 44041932
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatg 184  Q
    ||||||||||||||| |||||||||||||| |||||  |||||| ||||    
T  44041884 aaaccgaatcacatcagaatgagagggatcatgaggttgtgtaggtatg 44041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20054317 - 20054114
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20054317 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20054219  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20054218 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20054119  T
Q  250 cttct 254  Q
    |||||    
T  20054118 cttct 20054114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20054773 - 20054570
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20054773 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20054675  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20054674 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20054575  T
Q  250 cttct 254  Q
    |||||    
T  20054574 cttct 20054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20055229 - 20055026
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20055229 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20055131  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20055130 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20055031  T
Q  250 cttct 254  Q
    |||||    
T  20055030 cttct 20055026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20055685 - 20055482
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20055685 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20055587  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20055586 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20055487  T
Q  250 cttct 254  Q
    |||||    
T  20055486 cttct 20055482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20056141 - 20055938
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20056141 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20056043  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20056042 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20055943  T
Q  250 cttct 254  Q
    |||||    
T  20055942 cttct 20055938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20056597 - 20056394
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20056597 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20056499  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20056498 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20056399  T
Q  250 cttct 254  Q
    |||||    
T  20056398 cttct 20056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20057500 - 20057297
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||||||     
T  20057500 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20057402  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20057401 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20057302  T
Q  250 cttct 254  Q
    |||||    
T  20057301 cttct 20057297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 16452169 - 16451967
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          || |||||||||||    
T  16452169 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16452071  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||| | | ||||| |||||||||| |||||||||||||||||||| |||||||    
T  16452070 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16451971  T
Q  251 ttct 254  Q
    ||||    
T  16451970 ttct 16451967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 16461322 - 16461120
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          || |||||||||||    
T  16461322 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16461224  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||| | | ||||| |||||||||| |||||||||||||||||||| |||||||    
T  16461223 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16461124  T
Q  251 ttct 254  Q
    ||||    
T  16461123 ttct 16461120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 43057759 - 43057557
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| ||||| || ||||||||||| |||||| | ||||||||||||||||||||          ||||||||||||||    
T  43057759 tgtaacacccaaggctgaagagggc-ggggaatggtcgccggtgcacaaggcatgccaatgagcggctcccgacagcttttagaggaaccgaatcacatc 43057661  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  43057660 ggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatc 43057561  T
Q  251 ttct 254  Q
    ||||    
T  43057560 ttct 43057557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 52250116 - 52250318
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||| ||||| |||||| |||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||          |||||||||||| |    
T  52250116 tgtaatacccaaggctgacgagggc-ggggagcggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacacc 52250214  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||| ||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  52250215 ggaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 52250314  T
Q  251 ttct 254  Q
    ||||    
T  52250315 ttct 52250318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 254
Target Start/End: Complemental strand, 20845903 - 20845695
Alignment:
Q  54 caacgatgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaat 144  Q
    |||| |||||||||||| |||||| |||| | |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||||||||    
T  20845903 caactatgtaacacccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat 20845805  T
Q  145 cacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaaca 244  Q
    |||| |||||||||| || ||||||||||||| || |||| |||| |||||||||| | ||||||| |||||||||||| |||||||||||||||||| |    
T  20845804 cacaccggaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaaga 20845705  T
Q  245 tgcatcttct 254  Q
    ||||||||||    
T  20845704 tgcatcttct 20845695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20057956 - 20057753
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| || ||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||  ||||          ||| ||||||||     
T  20057956 atgtaacacccaaggttgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctaacagcttctagaggaactgaatcacac 20057858  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    || |||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20057857 cgaaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcat 20057758  T
Q  250 cttct 254  Q
    |||||    
T  20057757 cttct 20057753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 38340815 - 38341017
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||  |||||||| || |||||||| ||||||||||||||||||||| | |||||          ||||||||||||     
T  38340815 atgtaacacccaaggctgacgagggt-ggggagtggtcaccggtgcacaaggcacgacaatgagcggctactgacagcttctagaggaaccgaatcacac 38340913  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||| || ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  38340914 cggaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 38341013  T
Q  250 cttc 253  Q
    ||||    
T  38341014 cttc 38341017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 50002436 - 50002319
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| | ||||||| ||||||||||||||||||||| |||    
T  50002436 aaccgaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttat 50002337  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  50002336 caacaagatgcatcttct 50002319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 43057301 - 43057099
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||||| |||||| |||| | |||||||| | ||||||||| |||||| ||||||||||| |||||||||         | |||||||||||||    
T  43057301 atgtaacacccaaggctgacgaggac-ggggagtggttgccggtgcacaaggcatgacaatgagcgactcccgacaatttctagaggaaccgaatcacat 43057203  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | ||||||| |||||||| ||||||||||| |||| ||||||||||||||| | ||||||| |||||||||||| |||||||||||||||||| ||||||    
T  43057202 cagaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcat 43057104  T
Q  250 cttct 254  Q
    |||||    
T  43057103 cttct 43057099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 50002856 - 50002741
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||    
T  50002856 ccgaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatca 50002757  T
Q  239 acaacatgcatcttct 254  Q
    |||| |||||||||||    
T  50002756 acaagatgcatcttct 50002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 35759755 - 35759642
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| | | ||||| |||||||||||||||||||||||||||||    
T  35759755 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35759656  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  35759655 aagatgcatcttct 35759642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 35761061 - 35760948
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||| |||||||||| | | ||||| |||||||||||||||||||||||||||||    
T  35761061 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35760962  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  35760961 aagatgcatcttct 35760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 20061343 - 20061225
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||| |||||||||||||||||||| |||| || ||||||||| |||||||||| | | ||||| ||||||||||||||||||||||||    
T  20061343 aaactgaatcacatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctata 20061244  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  20061243 tcaacaagatgcatcttct 20061225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 20057044 - 20056850
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcacat 149  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||         || ||||||||||||     
T  20057044 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 20056946  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||         ||||||||| || ||||||| | |||||||  |||||||||||||||||||||||||||||| ||||||    
T  20056945 cggaatgagagggttcctgagg---------tatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcat 20056855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 31822900 - 31822697
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||||||||| || ||| | |||| | |||| |||||| ||||||||| |||||||||||||| ||||          |||| ||||||||    
T  31822900 atgtaacacccacggctgacgatggc-gaggagcggtcgctggtgcagaaggcacgataatgagcggctcccaacagcttctagagcaaccaaatcacat 31822802  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    | |||||||||||||| ||||||||||||| |||| ||||||||||||||| | ||  ||| ||||||| ||||||||||| ||||||||||| ||||||    
T  31822801 cagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcat 31822702  T
Q  250 cttct 254  Q
    |||||    
T  31822701 cttct 31822697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 50003299 - 50003109
Alignment:
Q  72 ggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagaggg 162  Q
    |||||| |||||||| | |||| ||| |||||||||||||| || |||| ||||||||||||||          ||||||||||||||||||||||||||    
T  50003299 ggctgacgagggcagag-agtggtcgtcggtgcaaaaggcatgataatgtgcggctcccgacagcttctaaaggaaccgaatcacatcggaatgagaggg 50003201  T
Q  163 atcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||| || || ||| ||||| ||||||| || |||| |||| || ||||||| |||||||||||||||||||| |||||||||||    
T  50003200 atcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttct 50003109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 7548002 - 7548203
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag-------aaaccgaatcacatcg 151  Q
    |||||||||||| | |||| |||||| |||| |||||| |||||||| ||||||||||||||| ||||||| ||||        |||| ||||||||| |    
T  7548002 atgtaacacccaggactgacgagggcggggg-gtgatcaccggtgcacaaggcacgacaatgaacggctcctgacaacttcgacaaactgaatcacattg 7548100  T
Q  152 gaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatct 251  Q
     ||||||||||||| ||||||||||||| |||| ||||||||| || || | || |||| || |||||||||||| || |||||||||||| |||||| |    
T  7548101 caatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatat 7548200  T
Q  252 tct 254  Q
    |||    
T  7548201 tct 7548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 12883462 - 12883636
Alignment:
Q  89 gagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgtag 179  Q
    ||||| ||| ||||||| |||||||||||||||||||||| ||||||          |||||||||||| |||||||||| |||||| ||||| ||| ||    
T  12883462 gagtggtcgtcggtgcacaaggcacgacaatgagcggctctcgacagcttctagacgaaccgaatcacaccggaatgagatggatcccgaggctgtgcag 12883561  T
Q  180 atatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
     ||||||||| |||| ||||| | |  |||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  12883562 gtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttct 12883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 30873101 - 30872984
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| ||||||||||||||| ||||||||||| || |||| ||||  ||||||||| | || |||  |||||||||||| ||||||||||||    
T  30873101 aaccgaatcacaccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatat 30873002  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  30873001 caacaagatgcatcttct 30872984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 2328309 - 2328427
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||| ||||||||||  ||  |||||||||  || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  2328309 aaactgaatcacattggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 2328408  T
Q  236 tcaacaacatgcatcttct 254  Q
    | ||||| |||||||||||    
T  2328409 ttaacaagatgcatcttct 2328427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 46693883 - 46693769
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactac-atggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    ||||||||||||||||||||||||||| ||| |||| |  |||||||||   ||||||||| | ||||||| || |||||||||||||||||||||||||    
T  46693883 gaatcacatcggaatgagagggatcctaaggtcgtgcatgtatgggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaa 46693784  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  46693783 caagatgcatcttct 46693769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 23180729 - 23180842
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||| ||||||||||||||| ||| |||||||||  |||||||||| |||||||| | | | ||| |||||||| ||||||||||||||||||||    
T  23180729 gaatcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaac 23180828  T
Q  241 aacatgcatcttct 254  Q
    || ||| |||||||    
T  23180829 aagatgtatcttct 23180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 10820587 - 10820702
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    ||||||||||||||||| ||||||||||  |||||| |||||  ||| |||||||||||||||| | ||  ||| |||||||||||||||||||||||||    
T  10820587 aaccgaatcacatcggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactacctatat 10820686  T
Q  237 caacaacatgcatctt 252  Q
    ||| || || ||||||    
T  10820687 caataagatacatctt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 2634922 - 2635036
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    |||||||||||||||||||||||||| |||||  ||| || ||||||||| |||||||||| |    || | |||||||||||||||||||||||| |||    
T  2634922 cgaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaa 2635021  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  2635022 caagatgcatcttct 2635036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 12727986 - 12728104
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttgg-tactacctata 235  Q
    ||||||||||||| | ||||| |||||| ||||| | |||||| |||||||| ||||||||||| | || |||| ||||||||||||| |||| ||||||    
T  12727986 aaccgaatcacattgaaatgaaagggattctgagactgtgtaggtatgggacaacatggttgaaggaagacttataagaattgtttggttactgcctata 12728085  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  12728086 tcaacaagatgcatcttct 12728104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 16907228 - 16907346
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    ||||| ||||| |||  ||||||||||||  |||| | ||| || ||||  ||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  16907228 aaaccaaatcatatcaaaatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctata 16907327  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| || ||||||||    
T  16907328 tcaacaagatacatcttct 16907346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 51373010 - 51372910
Alignment:
Q  152 gaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatct 251  Q
    ||||||||||||||| |||||| |  || |||| ||||  ||||||||| | ||||||| ||||||||||| |||||||||||||| |||| ||||||||    
T  51373010 gaatgagagggatcccgaggccatacaggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatct 51372911  T
Q  252 t 252  Q
    |    
T  51372910 t 51372910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 2634459 - 2634578
Alignment:
Q  136 aaaccgaatcacatcggaatgagaggg-atcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctat 234  Q
    |||||||||||||||| |||||||||| |||||||||  |||||  |||| || | |||| || || | |||||| ||||||||||||||||||| ||||    
T  2634459 aaaccgaatcacatcgaaatgagaggggatcctgaggttgtgtatgtatgagattgcatgattaaaggaaggcttgcaagaattgtttggtactagctat 2634558  T
Q  235 atcaacaacatgcatcttct 254  Q
    |  ||||| |||||||||||    
T  2634559 acaaacaagatgcatcttct 2634578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 20060422 - 20060374
Alignment:
Q  206 gcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20060422 gcttataagaattgtttggtactacctatatcaacaagatgcatcttct 20060374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 31823160 - 31823118
Alignment:
Q  212 aagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||||||||||| || |||||||||||    
T  31823160 aagaattatttggtactacctatatcaataaaatgcatcttct 31823118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 30873187 - 30873119
Alignment:
Q  60 tgtaacacccacggctgatgagggcagg-ggagtgatcgccggtgcaaaaggcacgacaatgagcggct 127  Q
    ||||||| ||| |||||| ||||||  | |||||| ||| ||||||| |||||||||||||||||||||    
T  30873187 tgtaacatccaaggctgacgagggcgcgtggagtggtcgtcggtgcacaaggcacgacaatgagcggct 30873119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 103; Significance: 3e-51; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 59 - 252
Target Start/End: Complemental strand, 18372 - 18170
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||| |||||||||||||||||| ||||||||| |||| ||||||  ||||||||||||||||||||||||||||          ||| |||||||||    
T  18372 atgtaatacccacggctgatgagggaaggggagtggtcgctggtgcaccaggcacgacaatgagcggctcccgacagcttctagaggaactgaatcacat 18273  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||| | || |||| |||||||||||| |||||||||||||||||| ||||||    
T  18272 cggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcat 18173  T
Q  250 ctt 252  Q
    |||    
T  18172 ctt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 79 - 254
Target Start/End: Complemental strand, 17816 - 17632
Alignment:
Q  79 gagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagagggatcctga 169  Q
    ||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||         | |||||||| ||||| ||||||||||||||||||    
T  17816 gagggaaggggagtggtcgccggtgcaccaggcacgacaatgagcggctcccgacaacttcttgaggaaccgaatgacatcagaatgagagggatcctga 17717  T
Q  170 ggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||||||| |||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||  ||| |||||||    
T  17716 ggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttct 17632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 17917 - 17841
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag 135  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  17917 atgtaacacccacggctgacgagggaaggggagtggtcgccggtgcacgaggcacgacaatgagcggctcccgacag 17841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 16811290 - 16811493
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| |||||| |||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||          || ||||||||||    
T  16811290 atgtaacacccaaggctgacgagggt-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacat 16811388  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||||||| | ||||||| |||||||||| |||||||||||| ||||||| ||||||    
T  16811389 cggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcat 16811488  T
Q  250 cttct 254  Q
    |||||    
T  16811489 cttct 16811493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 254
Target Start/End: Complemental strand, 25230482 - 25230282
Alignment:
Q  63 aacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcgga 153  Q
    ||||||||| ||||| ||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||||         | |||| ||||||||||||    
T  25230482 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25230383  T
Q  154 atgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttc 253  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  25230382 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25230283  T
Q  254 t 254  Q
    |    
T  25230282 t 25230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 254
Target Start/End: Complemental strand, 25238069 - 25237869
Alignment:
Q  63 aacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcgga 153  Q
    ||||||||| ||||| ||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||||         | |||| ||||||||||||    
T  25238069 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25237970  T
Q  154 atgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttc 253  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  25237969 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25237870  T
Q  254 t 254  Q
    |    
T  25237869 t 25237869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 13150335 - 13150133
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||          |||||||||||      
T  13150335 atgtaacacccaaggctgatgagggc-ggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgc 13150238  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||| ||||||||| ||||||    
T  13150237 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 13150138  T
Q  250 cttct 254  Q
    |||||    
T  13150137 cttct 13150133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Complemental strand, 11180269 - 11180068
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||          ||||||||||   |    
T  11180269 tgtaacacccaaggctgaagagggc-ggggagtggtcgccggtgcacaaggtacgacaatgagcggctcccgacagcttctagaggaaccgaatcagc-c 11180172  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||    
T  11180171 ggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 11180072  T
Q  251 ttct 254  Q
    ||||    
T  11180071 ttct 11180068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 37044944 - 37045147
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||||||| ||||| ||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||          ||||||||||||||    
T  37044944 tgtaacacccacagctgacgagggcaggggagtggtcaccggtgcacaaggcacgccaatgagcggctcccgacagcttctagaggaaccgaatcacatc 37045043  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
     |||||||||||||||||||||||||||| | ||||||||||||  |||| | | ||||| ||||||||||||||| |||||||||||||||  ||||||    
T  37045044 tgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatc 37045143  T
Q  251 ttct 254  Q
    ||||    
T  37045144 ttct 37045147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 62 - 254
Target Start/End: Original strand, 50347658 - 50347858
Alignment:
Q  62 taacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcgg 152  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||          |||||||||||  |||    
T  50347658 taacacccaaggctgacgagggc-ggggagtgatcgccggtgcacaaggaacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccgg 50347756  T
Q  153 aatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||||||||||||||||||||| ||||  |||| |||||| |||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  50347757 aatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatctt 50347856  T
Q  253 ct 254  Q
    ||    
T  50347857 ct 50347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 25230943 - 25230739
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||| | ||| ||||| | |||||||||| |||||||| ||||||||||||||||| |||||||||||          |||| ||||||||    
T  25230943 atgtaacacccacagttgacgagggtatgggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacat 25230844  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
     ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  25230843 tggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcat 25230744  T
Q  250 cttct 254  Q
     ||||    
T  25230743 tttct 25230739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 25238530 - 25238326
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    ||||||||||||| | ||| ||||| | |||||||||| |||||||| ||||||||||||||||| |||||||||||          |||| ||||||||    
T  25238530 atgtaacacccacagttgacgagggtatgggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacat 25238431  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
     ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  25238430 tggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcat 25238331  T
Q  250 cttct 254  Q
     ||||    
T  25238330 tttct 25238326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 28561655 - 28561858
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||||| | |||| |||||| |||||||| ||||||||||| ||||||||||||||||||||| | ||||         | ||| ||||||||     
T  28561655 atgtaacacccaagactgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctactgacaacttctagaggaactgaatcacac 28561753  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  28561754 cggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcat 28561853  T
Q  250 cttct 254  Q
    |||||    
T  28561854 cttct 28561858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 16810847 - 16811037
Alignment:
Q  72 ggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagaggg 162  Q
    |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||          || |||||||||||||||||||||||    
T  16810847 ggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcggaatgagaggg 16810945  T
Q  163 atcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| ||||||||||||||||||||||| |||||||||  | ||||||| ||||||||||  |||||| ||||||| |||| |||||||||||    
T  16810946 atcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttct 16811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 254
Target Start/End: Complemental strand, 20885333 - 20885151
Alignment:
Q  80 agggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagagggatcctgag 170  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||         | |||| |||||||||| ||||||||||||| ||||    
T  20885333 agggcaggggagtgatcgccggtgcacaaggcacgccaatgagcggctcccgacaacttctagaggaacc-aatcacatcgcaatgagagggatcttgag 20885235  T
Q  171 gccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    | ||||||| |||| ||||||||||||||| | || |||| |||||||||||| |||||||||||||||||| |||||||||||    
T  20885234 gtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttct 20885151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 39653074 - 39653276
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||| | |||||||| ||||||||||| ||||||||||||||||||||||| |||||          ||| |||||||| |    
T  39653074 tgtaacacccaaggctgacgaggac-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 39653172  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| ||||||||||||| || ||||||||| |||||||||| | | ||||| |||||||||| | |||||||||||||||||| |||||||    
T  39653173 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatc 39653272  T
Q  251 ttct 254  Q
    ||||    
T  39653273 ttct 39653276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 31284428 - 31284310
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  31284428 aaactgaatcacatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 31284329  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  31284328 tcaacaagatgcatcttct 31284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 254
Target Start/End: Complemental strand, 32227444 - 32227255
Alignment:
Q  73 gctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatcggaatgagaggga 163  Q
    ||||| |||||| |||||||| ||||| ||||| ||||||| |||||||||||||||| |||         | |||||||||||  ||||||||||||||    
T  32227444 gctgacgagggc-ggggagtggtcgccagtgcacaaggcacaacaatgagcggctcccaacaacttctagaggaaccgaatcacgccggaatgagaggga 32227346  T
Q  164 tcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||| ||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||| ||||| |||||||||||    
T  32227345 tcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttct 32227255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 30529686 - 30529799
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||   ||||||| ||||||| |||||||||||||||||||||    
T  30529686 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaac 30529785  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  30529786 aagatgcatcttct 30529799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 32227457 - 32227612
Alignment:
Q  107 aaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggtt 197  Q
    |||||||||||||||||||||||||||||          |||||||||||  |||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  32227457 aaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccggaatgagagggatc-tgaggccttgtaggtatgggactacatggtt 32227555  T
Q  198 gaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||| | ||||||| |||||||||| |||||||||||||| ||||| |||||||||||    
T  32227556 gaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttct 32227612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 14813859 - 14814061
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    |||||||| || |||||| |||||| | |||||| ||||||||||| ||||||||||||| ||||||| | || ||          |||||||||||| |    
T  14813859 tgtaacacacaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaattagcggcttctgagagcttctagaggaaccgaatcacacc 14813957  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||||||||||| |||||||||||||||| |||| |||| ||||||| || | ||||||| || ||||||||||||||||||||||||| || |||||||    
T  14813958 ggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatc 14814057  T
Q  251 ttct 254  Q
    ||||    
T  14814058 ttct 14814061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 39640935 - 39641049
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||| | || |||| |||| |||||||||||||||||||||||    
T  39640935 cgaatcacatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaa 39641034  T
Q  240 caacatgcatcttct 254  Q
     || |||||||||||    
T  39641035 taagatgcatcttct 39641049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 8067279 - 8067390
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||| | |||||||||| |  |||||| ||||||||||| |||||||||||||||||    
T  8067279 gaatcacatcggaatgagagggaccctgaggccgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaac 8067378  T
Q  241 aacatgcatctt 252  Q
    || |||||||||    
T  8067379 aagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 25239225 - 25239111
Alignment:
Q  140 cgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaa 239  Q
    ||||||||| ||| ||||||||||| |||||| ||||||| |||||||||| ||||||||| | | ||||| ||||||| ||||||||||||||||||||    
T  25239225 cgaatcacaccggtatgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaa 25239126  T
Q  240 caacatgcatcttct 254  Q
    ||| |||||||||||    
T  25239125 caagatgcatcttct 25239111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 25248105 - 25248223
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||| || |||||||| || ||||||||| ||||||| || | | | ||| ||||||||||||||||||||||||    
T  25248105 aaactgaatcacatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctata 25248204  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  25248205 tcaacaagatgcatcttct 25248223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 27187477 - 27187364
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||| |||||||||||||||||||||| ||| |  ||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||      
T  27187477 gaatcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcact 27187378  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  27187377 aagatgcatcttct 27187364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 41472300 - 41472412
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||||||||||| |||  || |||| |||| |||||||||| ||| ||||| ||||||||||||||||||| |||||||||    
T  41472300 gaatcacatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaa-ggaagcttataagaattgtttggtactacatatatcaac 41472398  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  41472399 aagatgcatcttct 41472412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 32797084 - 32796969
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    ||||||||||||| ||| |||||||||||||| || ||||| ||||  ||||||||||||||   || |||| |||||||||||||||||||||||||||    
T  32797084 ccgaatcacatcgaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatca 32796985  T
Q  239 acaacatgcatcttct 254  Q
    |||| |||||||||||    
T  32796984 acaagatgcatcttct 32796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 7477191 - 7477303
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||||||||||||||||| | | |||| || |||| |||| |||||||||| | ||||||| ||||||| ||||||||||| ||||||||||    
T  7477191 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7477290  T
Q  242 acatgcatcttct 254  Q
    | || ||||||||    
T  7477291 agatacatcttct 7477303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 7493881 - 7493993
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||||||||||||| |||||| | | |||| || |||| |||| |||||||||| | ||||||| ||||||| ||||||||||| ||||||||||    
T  7493881 aatcacatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7493980  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  7493981 agatgcatcttct 7493993  T

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Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 14820149 - 14820264
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| || |||||||||| ||||||| |||||||| |||||| || || || | || | ||||||| ||||||||||||||||||| |||||    
T  14820149 aaccgaatcacaccgcaatgagagggttcctgagcccgtgtaggtatggggctgcacggctaaaggaaggcttataagaattgtttggtactacttatat 14820248  T
Q  237 caacaacatgcatctt 252  Q
    |||||| |||||||||    
T  14820249 caacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 29224326 - 29224436
Alignment:
Q  144 tcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaac 243  Q
    ||||||| |||||| |||| || ||||||| |||||||||| |||| |||||||||| | || |||| ||||||||||||||||||||||||  |||||     
T  29224326 tcacatcagaatgaaagggttcatgaggccatgtagatatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaag 29224425  T
Q  244 atgcatcttct 254  Q
    |||||||||||    
T  29224426 atgcatcttct 29224436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 2911090 - 2911207
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| | ||||||||||||||| ||||||||| || |||||||| ||||||||||| | | | ||| || ||||||||| || |||||||||    
T  2911090 aaccgaatcacacctgaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatat 2911189  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||| ||||    
T  2911190 caacaagatgcatattct 2911207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 13150656 - 13150588
Alignment:
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  13150656 gactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttct 13150588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 25802685 - 25802582
Alignment:
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||||||||| || |||| ||||| |||| |||| ||||||| |  | ||||| | |||||| |||||||||||||||||||||||| |||||||    
T  25802685 ggaatgagagggatcatgtggccatgtaggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatc 25802586  T
Q  251 ttct 254  Q
    ||||    
T  25802585 ttct 25802582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 32386850 - 32386768
Alignment:
Q  172 ccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||| || |||||||||  ||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  32386850 ccgtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttct 32386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 25803155 - 25803038
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||| |||||||| |||||| |||| | | ||||||| ||||||||| ||||||||||   || |||  ||||||||||||||||||||||||     
T  25803155 aaccgaatcatatcggaataagagggttcctaatgtcgtgtaggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataa 25803056  T
Q  237 caacaacatgcatcttct 254  Q
     ||||| ||| |||||||    
T  25803055 aaacaagatgtatcttct 25803038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 39653529 - 39653604
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacag 135  Q
    |||||||||||| |||||| |||||  |||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  39653529 atgtaacacccaaggctgacgagggt-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacag 39653604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 25238786 - 25238718
Alignment:
Q  186 gactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||||||||||| | || |||| |||||||||||||||||| || ||||||||| |||||||||||    
T  25238786 gactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttct 25238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 41473996 - 41474097
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||| ||||||||||||| ||||| |||  || |||| ||||  |||||| || | || |||| |||||||||||| |||| |||||||||||    
T  41473996 gaatcacatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaac 41474095  T
Q  241 aa 242  Q
    ||    
T  41474096 aa 41474097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 4067454 - 4067394
Alignment:
Q  194 ggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    ||||||| | || |||| || |||||||||||||||||||||||||||| |||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttct 4067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 12820638 - 12820702
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaa 200  Q
    |||| |||||||||||||||||||||||| || |||||||  || ||||||||| ||||||||||    
T  12820638 aaactgaatcacatcggaatgagagggattctaaggccgtacaggtatgggactgcatggttgaa 12820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 13155437 - 13155374
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcgg 125  Q
    |||||||||||  ||||| |||||| |||||||| ||||||||||| |||||||||||||||||||    
T  13155437 tgtaacacccaatgctgacgagggc-ggggagtg-tcgccggtgcacaaggcacgacaatgagcgg 13155374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 32388878 - 32388842
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgt 177  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32388878 gaatcacatcggaatgagagggatcctgaggtcgtgt 32388842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 3890048 - 3890088
Alignment:
Q  212 aagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    |||||||||||| |||||| ||||||||||| |||||||||    
T  3890048 aagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 3899870 - 3899910
Alignment:
Q  212 aagaattgtttggtactacctatatcaacaacatgcatctt 252  Q
    ||||||||||||||||||| |||| |||||| |||||||||    
T  3899870 aagaattgtttggtactacatataccaacaagatgcatctt 3899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 25238908 - 25238849
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaat 119  Q
    |||||||||||| |||||| |||||| |||||||| ||||||||||| || ||| ||||||    
T  25238908 atgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaagcaggacaat 25238849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 2652 - 2854
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||| ||| |||||||||||||||| |||||||||||         | || |||||||||||    
T  2652 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggagcacaaggcacgacaatgagtggctcccgacaacttctagaggaatcgaatcacatc 2750  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||||| ||||||     
T  2751 gaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcata 2850  T
Q  251 ttct 254  Q
    ||||    
T  2851 ttct 2854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 154667 - 154869
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacat 149  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||          |||||||||||      
T  154667 atgtaacacccaaggctgatgagggc-ggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgc 154764  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcat 249  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||| |||||||||| ||||||||| ||||||    
T  154765 cggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcat 154864  T
Q  250 cttct 254  Q
    |||||    
T  154865 cttct 154869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 151551 - 151614
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcgg 125  Q
    |||||||||||  ||||| |||||| |||||||| ||||||||||| |||||||||||||||||||    
T  151551 tgtaacacccaatgctgacgagggc-ggggagtg-tcgccggtgcacaaggcacgacaatgagcgg 151614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 245085 - 245198
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  245085 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 245184  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  245185 aagatgcatcttct 245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 245509 - 245627
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||  ||||| ||||||| |||| |||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  245509 aaactgaatcacatcataatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctata 245608  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  245609 tcaacaagatgcatcttct 245627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 1130 - 1332
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||         | |||||||||||| |    
T  1130 tgtaacacccaaggctgacgagggc-ggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaaccgaatcacacc 1228  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||||||||| || |||||||||| || || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  1229 ggaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatc 1328  T
Q  251 ttct 254  Q
    ||||    
T  1329 ttct 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 58 - 255
Target Start/End: Original strand, 23581 - 23786
Alignment:
Q  58 gatgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgac---------agaaaccgaatcaca 148  Q
    ||||||||||||| |||||| |||||| ||||| || ||||||||||| ||||||||||||||||||||||| ||          || ||||||||||||    
T  23581 gatgtaacacccaaggctgacgagggc-ggggaatggtcgccggtgcacaaggcacgacaatgagcggctcctgatggcatctagaggaaccgaatcaca 23679  T
Q  149 tcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgca 248  Q
     || |||||||||| || |||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||    
T  23680 ccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgca 23779  T
Q  249 tcttctc 255  Q
    |||||||    
T  23780 tcttctc 23786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 254
Target Start/End: Original strand, 4471 - 4673
Alignment:
Q  60 tgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 150  Q
    ||||||||||| |||||| |||||| | ||||||  |||||||||| ||||||||||||||||||||||| |||||          ||||||||||||||    
T  4471 tgtaacacccaaggctgacgagggc-gaggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacatc 4569  T
Q  151 ggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    |||| ||||||| |||||||||| || || ||||||||| |||||||||| | ||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  4570 ggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatc 4669  T
Q  251 ttct 254  Q
    ||||    
T  4670 ttct 4673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 4925 - 5133
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||| | |||||| |||||| | |||||| ||||||||||| ||||||||||||| ||||||||| ||||         | ||||||||||||     
T  4925 atgtaacacctaaggctgacgagggc-gaggagtggtcgccggtgcacaaggcacgacaattagcggctcctgacaacttctagaggaaccgaatcacac 5023  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggctt-----acaagaattgtttggtactacctatatcaacaaca 244  Q
    ||||||||||||| |||||||||| || || ||||||||| |||||||||| | ||| ||     | ||||||||||||||||||||||||| ||||| |    
T  5024 cggaatgagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaaga 5123  T
Q  245 tgcatcttct 254  Q
    ||||||||||    
T  5124 tgcatcttct 5133  T

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Target: scaffold0040 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 2362 - 2244
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| ||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  2362 aaactgaatcacatcggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctata 2263  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  2262 tcaacaagatgcatcttct 2244  T

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Target: scaffold0007 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 142426 - 142308
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| | | | ||| ||||||||||||||||||||||||    
T  142426 aaactgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctata 142327  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  142326 tcaacaagatgcatcttct 142308  T

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Target: scaffold0322 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 18966 - 19078
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  18966 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 19065  T
Q  242 acatgcatcttct 254  Q
    | || ||||||||    
T  19066 agattcatcttct 19078  T

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Target: scaffold0322; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 18268 - 18209
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaa 200  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||    
T  18268 gaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaa 18209  T

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Target: scaffold0024 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 105720 - 105832
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    ||||||||||||||||||||||||||||||||||  || ||||| ||| || ||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  105720 aatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 105819  T
Q  242 acatgcatcttct 254  Q
    | |||||||||||    
T  105820 aaatgcatcttct 105832  T

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Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 10294 - 10410
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||| || | ||||||| ||||||||||| ||||||||||||    
T  10294 aaactgaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctata 10393  T
Q  236 tcaacaacatgcatctt 252  Q
    ||||||| |||||||||    
T  10394 tcaacaagatgcatctt 10410  T

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Target: scaffold0020 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 107615 - 107497
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||||||||||||||||||||||| ||||||||||  || ||||||||| |||||||||| | ||||||| |||||||||||| ||||||| |||    
T  107615 aaactgaatcacatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaata 107516  T
Q  236 tcaacaacatgcatcttct 254  Q
    ||||||| |||||||||||    
T  107515 tcaacaagatgcatcttct 107497  T

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Target: scaffold0499 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 2202 - 2085
Alignment:
Q  137 aaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatat 236  Q
    |||||||||||| | |||||| |||| ||||||||||||| || |||| |||| |||||||||| | ||||||| |||||||||||||||||||||||||    
T  2202 aaccgaatcacaccagaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatat 2103  T
Q  237 caacaacatgcatcttct 254  Q
    |||||| |||||||||||    
T  2102 caacaagatgcatcttct 2085  T

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Target: scaffold0022 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 162830 - 162712
Alignment:
Q  136 aaaccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctata 235  Q
    |||| |||| ||||||||||||||||||||||||||||||  || |||| |||| |||||||||| | || |||| ||||||||||||||||||||||||    
T  162830 aaactgaattacatcggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctata 162731  T
Q  236 tcaacaacatgcatcttct 254  Q
    | ||||| |||||||||||    
T  162730 ttaacaagatgcatcttct 162712  T

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Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 69964 - 69851
Alignment:
Q  139 ccgaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatca 238  Q
    |||| |||||||  ||||||||||||||| || |  || || |||| |||| ||| |||||| | | ||||| || ||||||||||||||||||||||||    
T  69964 ccgattcacatcataatgagagggatcctaagactatgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatca 69865  T
Q  239 acaacatgcatctt 252  Q
    |||  |||||||||    
T  69864 acatgatgcatctt 69851  T

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Target: scaffold0664 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 4129 - 4016
Alignment:
Q  141 gaatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaac 240  Q
    |||||||| | ||||||||||||||| ||||||||| || ||||||||| ||| |||||| | | ||||| ||||||||||||||||||||| |||||||    
T  4129 gaatcacaccagaatgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaac 4030  T
Q  241 aacatgcatcttct 254  Q
    || |||||||||||    
T  4029 aagatgcatcttct 4016  T

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Target: scaffold0557 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 659 - 799
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca---------gaaaccgaatcacat 149  Q
    |||||||||| | |||||| |||| ||||||||||| ||| |||||| |||| |||||||||||||||||||||||         | |||||||||||||    
T  659 atgtaacacctaaggctgacgagg-caggggagtgaccgctggtgcacaaggtacgacaatgagcggctcccgacaacttatagaggaaccgaatcacat 757  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgggactac 191  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  758 cggaatgagagggatcctgaggccatgtaggtatgggactac 799  T

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Target: scaffold0557; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 2150 - 2217
Alignment:
Q  187 actacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttct 254  Q
    |||||||||||||| | ||||||| ||||||||||||||||| ||||||| ||||| |||||||||||    
T  2150 actacatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttct 2217  T

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Target: scaffold0442 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 2413 - 2548
Alignment:
Q  59 atgtaacacccacggctgatgagggcaggggagtgatcgccggtgcaaaaggcacgacaatgagcggctcccg---------acagaaaccgaatcacat 149  Q
    |||||||||| | ||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||||         | || |||||||||||||    
T  2413 atgtaacacctaaggctgacaagggcaagggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgaaaacttatagaggaaccgaatcacat 2512  T
Q  150 cggaatgagagggatcctgaggccgtgtagatatgg 185  Q
    | |||||||||||||||||||||| ||||| |||||    
T  2513 cagaatgagagggatcctgaggccatgtaggtatgg 2548  T

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Target: scaffold0101 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 45387 - 45497
Alignment:
Q  142 aatcacatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaaca 241  Q
    |||||||||||||||||||| ||| |||| ||||| | ||||| |||||||| |||||| | || ||||  |||||| ||||||||||||||||||||||    
T  45387 aatcacatcggaatgagagg-atcttgagaccgtgcatatatgtgactacattgttgaaggaagacttatgagaattatttggtactacctatatcaaca 45485  T
Q  242 acatgcatcttc 253  Q
    | ||| ||||||    
T  45486 agatgtatcttc 45497  T

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Target: scaffold0391 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 250
Target Start/End: Original strand, 14680 - 14849
Alignment:
Q  89 gagtgatcgccggtgcaaaaggcacgacaatgagcggctcccgaca--------gaaaccgaatcacatcggaatgagagggatcctgaggccgtgtaga 180  Q
    ||||| |||||||||||||||||| |||||||||||||||| |  |        |||| |||||||||||||||  ||||||||||| |   |||| |      
T  14680 gagtggtcgccggtgcaaaaggcatgacaatgagcggctcctggaagcttttaggaaagcgaatcacatcggaacaagagggatcctaatatcgtgcatg 14779  T
Q  181 tatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 250  Q
    ||| ||||| ||  |||||| | | ||||| ||||||||||||||| |||||||||||| || |||||||    
T  14780 tataggactgcagtgttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatc 14849  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 26074 - 26182
Alignment:
Q  146 acatcggaatgagagggatcctgaggccgtgtagatatgggactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacat 245  Q
    ||||| ||| |||||||||||| |||||||| || | || |||| |||||||| ||   |||||| |  |||| ||||||||||| ||||||||||  ||    
T  26074 acatcagaaagagagggatcctaaggccgtgcaggtgtgagacttcatggttgcataatggcttatacaaattttttggtactacatatatcaacatgat 26173  T
Q  246 gcatcttct 254  Q
    |||||||||    
T  26174 gcatcttct 26182  T

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