View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10566_low_9 (Length: 221)
Name: NF10566_low_9
Description: NF10566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10566_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 2794047 - 2793861
Alignment:
| Q |
19 |
gattaaacacagtatcagtgatagggttaagcagtttctcaatgttaatcttcttgtcaccaatagagtcgtttttcagaatggaaagaatctcatcagc |
118 |
Q |
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| T |
2794047 |
gattaaacacagtatcagtgatagggttaagcagtttctcaatgttaatcttcttgtcaccaacagagtcgtttttcagaatggaaagaatctcatcagc |
2793948 |
T |
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| Q |
119 |
agcacctctgataatcccaagcggctgaccaccaaaccgctgctggattacactcaacatcgcctcataagcagcacgagtttcctt |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2793947 |
agcacctctgataatcccaagcggctgaccaccaaaccgctgctggattacactcaacatcgcctcataagcagcacgagtttcctt |
2793861 |
T |
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