View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10567_low_2 (Length: 437)

Name: NF10567_low_2
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10567_low_2
NF10567_low_2
[»] chr4 (4 HSPs)
chr4 (1-209)||(14118942-14119150)
chr4 (278-382)||(14119199-14119303)
chr4 (368-421)||(14119316-14119369)
chr4 (55-205)||(14089651-14089801)
[»] chr2 (11 HSPs)
chr2 (1-211)||(27487766-27487976)
chr2 (278-381)||(27487616-27487719)
chr2 (281-382)||(25896692-25896791)
chr2 (368-410)||(25896637-25896679)
chr2 (32-133)||(25896919-25897021)
chr2 (292-347)||(27877335-27877390)
chr2 (281-347)||(27179749-27179815)
chr2 (368-410)||(27487560-27487602)
chr2 (281-347)||(27829291-27829357)
chr2 (368-410)||(27877234-27877276)
chr2 (1-58)||(16374602-16374659)
[»] chr1 (2 HSPs)
chr1 (283-381)||(22095960-22096059)
chr1 (1-119)||(22095707-22095826)
[»] chr5 (3 HSPs)
chr5 (285-381)||(30073446-30073544)
chr5 (368-413)||(30073387-30073432)
chr5 (100-213)||(30073596-30073709)
[»] chr3 (7 HSPs)
chr3 (299-349)||(26882642-26882692)
chr3 (40-211)||(26882756-26882929)
chr3 (57-142)||(15486598-15486682)
chr3 (300-351)||(21516822-21516873)
chr3 (368-398)||(11533368-11533398)
chr3 (296-341)||(7652247-7652292)
chr3 (157-205)||(11533583-11533630)
[»] chr7 (2 HSPs)
chr7 (69-211)||(28489142-28489284)
chr7 (281-366)||(28489014-28489092)
[»] chr6 (1 HSPs)
chr6 (306-366)||(18562147-18562208)
[»] chr8 (1 HSPs)
chr8 (55-133)||(24176329-24176407)


Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 14118942 - 14119150
Alignment:
Q  1 tgatatgaataaaagaactgtgatagaaatcaacaaggcaaaacacaagaccatagaaaacaatgatacaaatcaagacattttgatttgattcacatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14118942 tgatatgaataaaagaactgtgatagaaatcaacaaggcaaaatacaagaccatagaaaacaatgatacaaatcaagacattttgatttgattcacatgt 14119041  T
Q  101 gatacgattcaaagaatcaaaaatcaaatcaaaactacatgatcaacaagaaacaaggtcagagagaataaatgatacgattcaaattaatttgaatcaa 200  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14119042 gatacgattcaaagaatcatgaatcaaatcaaaactacatgatcaacaagaaacaaggtcagagagaataaatgatacgattcaaattaatttgaatcaa 14119141  T
Q  201 atcaaggac 209  Q
    |||||||||    
T  14119142 atcaaggac 14119150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 278 - 382
Target Start/End: Original strand, 14119199 - 14119303
Alignment:
Q  278 gacaaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggctttaactaaaacttatttaaacatcat 377  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14119199 gacaaacttgatatacaagacacatatgacacaacgagacaaggattactaggtgctttaacatgttctaggctttaactaaaacttatttaaacatcat 14119298  T
Q  378 caaaa 382  Q
    |||||    
T  14119299 caaaa 14119303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 14119316 - 14119369
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacactatgagcaacttcacttgtgaaatc 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14119316 taaacatcatcaaaacacaaacctaacactatgagcaacttcacttgtgaaatc 14119369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 14089801 - 14089651
Alignment:
Q  55 agaaaacaatgatacaaatcaagacattttgatttgattcacatgtgatacgattcaaa-gaatcaaaaatcaaatcaaaactacatgatcaacaagaaa 153  Q
    |||||| |||||||  |||||||  ||||||||| ||||||||| |||||||||||||| ||||||  |||| |||| |||||||||||   | ||||||    
T  14089801 agaaaataatgatatgaatcaaggtattttgattcgattcacatatgatacgattcaaaggaatcatgaatcgaatc-aaactacatgaaacagaagaaa 14089703  T
Q  154 caaggtcagagagaataaatgatacgattcaaattaatttgaatcaaatcaa 205  Q
    ||| | ||||||| || | ||||| || ||||   |||||||||| ||||||    
T  14089702 caaaggcagagaggatgattgataagaatcaaggaaatttgaatcgaatcaa 14089651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27487976 - 27487766
Alignment:
Q  1 tgatatgaataaaagaactgtgatagaaatcaacaaggcaaaacacaagaccatagaaaa-caatgatacaaatcaagacattttgatttgattcacatg 99  Q
    ||||| |||| |||||| ||||||   | |||| ||||||||| |||||||||||||||| ||||||||| ||||| || |||||||||  |||||||||    
T  27487976 tgatacgaatcaaagaattgtgattcgattcaataaggcaaaatacaagaccatagaaaaacaatgatacgaatcaggatattttgattcaattcacatg 27487877  T
Q  100 tgatacgattcaaagaatcaaaaatcaaatcaaaactacatgatcaacaagaaacaaggtcagagagaataaatgatacgattcaaattaatttgaatca 199  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||| | |||||| ||| | |||||||||||||| |  | ||||||     
T  27487876 tgatacgattcaaagaatcatgaatcaaatc-aaactacatgaccaacaagaaacaatgacagagaaaatgattgatacgattcaaagtgttatgaatcg 27487778  T
Q  200 aatcaaggacct 211  Q
    ||||||||||||    
T  27487777 aatcaaggacct 27487766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 278 - 381
Target Start/End: Complemental strand, 27487719 - 27487616
Alignment:
Q  278 gacaaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggctttaactaaaacttatttaaacatcat 377  Q
    |||| |||||| |||||| ||| ||||||||||||||||||| |||| ||||||| |||||| ||||| | | ||||||||||||||||||||| |||||    
T  27487719 gacacacttgacatacaaaacatatatgacacaatgagacaataattgctaggtgttttaacttgttccatgttttaactaaaacttatttaaatatcat 27487620  T
Q  378 caaa 381  Q
    ||||    
T  27487619 caaa 27487616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 25896791 - 25896692
Alignment:
Q  281 aaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggc-tttaactaaaacttatttaaacatcatca 379  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||  || |||||||| ||||||||| ||||| | |||||||||||    
T  25896791 aaacttgatattcaagacacatatgacacaattagataagaattactagatgcttta--atattctaggcatttaactaatactta-tcaaacatcatca 25896695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 25896679 - 25896637
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacactatgagcaacttca 410  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  25896679 taaacatcatcaaaacacaaacctaacactaggagcaacttca 25896637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 25897021 - 25896919
Alignment:
Q  32 aacaaggcaaaacacaagaccatagaaaac-aatgatacaaatcaagacattttgatttgattcacatgtgatacgattcaaagaatcaaaaatcaaatc 130  Q
    |||||||||||||||||||| | ||||||| |||||||| |||||||  ||||||||| |||||| |  |||||| ||||| |||||||  |||| ||||    
T  25897021 aacaaggcaaaacacaagactaaagaaaacaaatgatacgaatcaagcaattttgattcgattcatacatgatacaattcatagaatcatgaatcgaatc 25896922  T
Q  131 aaa 133  Q
    |||    
T  25896921 aaa 25896919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 27877390 - 27877335
Alignment:
Q  292 acaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttcta 347  Q
    |||||||| |||||||||||||| ||||| ||| |||||||||||||||| |||||    
T  27877390 acaagacatatatgacacaatgaaacaaggattgctaggtgctttaacatattcta 27877335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 27179815 - 27179749
Alignment:
Q  281 aaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttcta 347  Q
    |||||||||| ||||| |||||||| ||| |||| ||||| ||| |||||||||||||||| |||||    
T  27179815 aaacttgatacacaagccacatatgtcacgatgaaacaaggattgctaggtgctttaacatattcta 27179749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 27487602 - 27487560
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacactatgagcaacttca 410  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  27487602 taaacatcatcaaaacacaagcctaacactataagcaacttca 27487560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 27829357 - 27829291
Alignment:
Q  281 aaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttcta 347  Q
    |||||||||| ||||| |||||||| ||| |||| ||||| ||| |||||||||||||||| |||||    
T  27829357 aaacttgatacacaagccacatatgtcacgatgaaacaaggattgctaggtgctttaacatattcta 27829291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 27877276 - 27877234
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacactatgagcaacttca 410  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  27877276 taaacatcatcaaaacacaaacctaacactaagtgcaacttca 27877234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16374602 - 16374659
Alignment:
Q  1 tgatatgaataaaagaactgtgatagaaatcaacaaggcaaaacacaagaccatagaa 58  Q
    |||||||||| ||||||| || |||  | |||||||||||||||||||||||| ||||    
T  16374602 tgatatgaatcaaagaacagtaatacgattcaacaaggcaaaacacaagaccagagaa 16374659  T

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Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 22095960 - 22096059
Alignment:
Q  283 acttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggc-tttaactaaaacttatttaaacatcatcaaa 381  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  22095960 acttgatatacaaaacacatatgacacaatgagacaagaattgctaggagctttaacatgttctagacttttaagtaaaacttatttaaacatcatcaaa 22096059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22095707 - 22095826
Alignment:
Q  1 tgatatgaataaaagaactgtgatagaaatcaacaaggcaaaacacaagaccatagaaaa-caatgatacaaatcaagacattttgatttgattcacatg 99  Q
    ||||| |||| ||||||||||||||  | | || || ||||||||| |||||| | |||| ||||||||| |||||||| ||||||||| |||||| |||    
T  22095707 tgatacgaatcaaagaactgtgatatgattaaataaagcaaaacaccagaccaaacaaaatcaatgatacgaatcaagatattttgattcgattcatatg 22095806  T
Q  100 tgatacgattcaaagaatca 119  Q
    ||||||||||||||||||||    
T  22095807 tgatacgattcaaagaatca 22095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 30073544 - 30073446
Alignment:
Q  285 ttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggctt--taactaaaacttatttaaacatcatcaaa 381  Q
    ||||||||||| |||||||||||||||||||||||| |||  | ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  30073544 ttgatatacaaaacacatatgacacaatgagacaaggattgttgggtgctttaacatgttctatgctttataactaaaacttatttaaacatcatcaaa 30073446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 30073432 - 30073387
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacactatgagcaacttcactt 413  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  30073432 taaacatcatcaaaacacaaatctaacactataagcaacttcactt 30073387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 30073709 - 30073596
Alignment:
Q  100 tgatacgattcaaagaatcaaaaatcaaatcaaaactacatgatcaacaagaaacaaggtcagagagaataaatgatacgattcaaattaatttgaatca 199  Q
    ||||| ||||||||||||||  |||| |||||||  |||||||  |||||||||||  | || ||| ||| | |||| ||||||||| || ||||||||     
T  30073709 tgatatgattcaaagaatcatgaatcgaatcaaacttacatgactaacaagaaacagtggcatagataatgattgattcgattcaaaatattttgaatcg 30073610  T
Q  200 aatcaaggacctgg 213  Q
    ||||||||||||||    
T  30073609 aatcaaggacctgg 30073596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 26882692 - 26882642
Alignment:
Q  299 acatatgacacaatgagacaagaattactaggtgctttaacatgttctagg 349  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  26882692 acatatgacacaatgagacaaggatttctaggtgctttaacatgttctagg 26882642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 211
Target Start/End: Complemental strand, 26882929 - 26882756
Alignment:
Q  40 aaaacacaagaccatagaaaacaat-gatacaaatcaagacatttt-gatttgattcacatgtgatacgattcaaagaatcaaaaatcaaatcaaaacta 137  Q
    |||||||||||||| |||||||||| | ||| ||| || ||||||| ||||||||||| || ||| |||||| ||| | |||  |||  |||||||| |     
T  26882929 aaaacacaagaccagagaaaacaattggtacgaattaacacatttttgatttgattcatatatgagacgattaaaaaattcatgaattgaatcaaaattg 26882830  T
Q  138 catgatcaacaagaaacaaggtcagagagaataaatgatacgattcaaattaatttgaatcaaatcaaggacct 211  Q
    ||||| || ||| | | |||| || |||||||||||||||||||||||| |||| |||||   |||||||||||    
T  26882829 catgaacaccaaaagataaggacaaagagaataaatgatacgattcaaactaatatgaattggatcaaggacct 26882756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 15486598 - 15486682
Alignment:
Q  57 aaaacaatgatacaaatcaagacattttgatttgattcacatgtgatacgattcaaagaatcaaaaatcaaatcaaaactacatga 142  Q
    |||| ||||||||||||||||| ||  ||||| ||||||||| ||||||||||||||  ||||  |||| |||| |||||||||||    
T  15486598 aaaataatgatacaaatcaagaaataatgattcgattcacatatgatacgattcaaaagatcatgaatcgaatc-aaactacatga 15486682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 21516822 - 21516873
Alignment:
Q  300 catatgacacaatgagacaagaattactaggtgctttaacatgttctaggct 351  Q
    |||||||||||||||| |||  ||| |||||||||||||||| |||||||||    
T  21516822 catatgacacaatgaggcaatgattgctaggtgctttaacattttctaggct 21516873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 398
Target Start/End: Complemental strand, 11533398 - 11533368
Alignment:
Q  368 taaacatcatcaaaacacaaacctaacacta 398  Q
    |||||||||||||||||||||||||||||||    
T  11533398 taaacatcatcaaaacacaaacctaacacta 11533368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 7652292 - 7652247
Alignment:
Q  296 gacacatatgacacaatgagacaagaattactaggtgctttaacat 341  Q
    |||||||| ||||||||||| ||  |||||||||||||||||||||    
T  7652292 gacacataggacacaatgaggcatcaattactaggtgctttaacat 7652247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 11533630 - 11533583
Alignment:
Q  157 ggtcagagagaataaatgatacgattcaaattaatttgaatcaaatcaa 205  Q
    |||||||||||| ||||||||||||||||| || |||||||| ||||||    
T  11533630 ggtcagagagaa-aaatgatacgattcaaactattttgaatcgaatcaa 11533583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 28489284 - 28489142
Alignment:
Q  69 caaatcaagacattttgatttgattcacatgtgatacgattcaaagaatcaaaaatcaaatcaaaactacatgatcaacaagaaacaaggtcagagagaa 168  Q
    |||||||||||||||||||| || |||    ||||||||||||||||||||  || | |||||||   ||||| ||||||| |  || || |||||||||    
T  28489284 caaatcaagacattttgattcgactcatgaatgatacgattcaaagaatcatgaaccgaatcaaattcacatggtcaacaaaagccagggacagagagaa 28489185  T
Q  169 taaatgatacgattcaaattaatttgaatcaaatcaaggacct 211  Q
      ||||||||||||||||   ||||||||| |||||| |||||    
T  28489184 ggaatgatacgattcaaacatatttgaatcgaatcaatgacct 28489142  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 366
Target Start/End: Complemental strand, 28489092 - 28489014
Alignment:
Q  281 aaacttgatatacaagacacatatgacacaatgagacaagaattactaggtgctttaacatgttctaggc-tttaactaaaacttat 366  Q
    ||||||||||||||||||||||||||||||| |        ||||||| ||| ||||||||||||||||| ||||||||| ||||||    
T  28489092 aaacttgatatacaagacacatatgacacaacg--------attactaagtgttttaacatgttctaggcatttaactaatacttat 28489014  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 18562147 - 18562208
Alignment:
Q  306 acacaatgagacaagaattactaggtgctttaacatgttctaggc-tttaactaaaacttat 366  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||| ||||||    
T  18562147 acacaatgagacatgaattactaggtgctttaacacgttttaggcatttaactaatacttat 18562208  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 24176329 - 24176407
Alignment:
Q  55 agaaaacaatgatacaaatcaagacattttgatttgattcacatgtgatacgattcaaagaatcaaaaatcaaatcaaa 133  Q
    |||||| |||||||||||||||   ||||||||||||||||||  ||||| ||||||||| ||||  |||| |||||||    
T  24176329 agaaaataatgatacaaatcaaagtattttgatttgattcacacatgatatgattcaaaggatcatgaatcgaatcaaa 24176407  T

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