View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10567_low_22 (Length: 239)
Name: NF10567_low_22
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10567_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 30848692 - 30848914
Alignment:
| Q |
1 |
caacagcgaacaatttgttgtatatggaagcagaatatggcaaccttttggagaatttgactttggagactaaaaaatcagttacaaaacattctgttgt |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |
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| T |
30848692 |
caacagtgaacaatttgttgtatatggaagcagaatatggcaaccttttggagaatttgactttggagactaaaaaatcaattacttaacattctgttgt |
30848791 |
T |
|
| Q |
101 |
aatctatggtttggagaatcaacttttctaacacaaattgagtcagcacatattacaattttcattccaaaacaaaaaattgagtcagcatgaaataatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30848792 |
aatctatggtttggagaatcaacttttctaacacaaattgagtcagcacatattacaattttcattccaaaacaaaaaattgagtcagcatgaaataatt |
30848891 |
T |
|
| Q |
201 |
gcaccggaaaacactcagatttt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
30848892 |
gcaccggaaaacactcagatttt |
30848914 |
T |
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