View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10567_low_24 (Length: 238)
Name: NF10567_low_24
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10567_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 7269660 - 7269870
Alignment:
| Q |
12 |
gagaagaaaaatattgtcaaatattcaaatatatttattttggnnnnnnnntcatttctgacccatcaatagacaaacatatgccacaatattttacttt |
111 |
Q |
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| T |
7269660 |
gagatgaaaaatattgtcaaatattcaaatatatttattttggaaaaaa--tcatttctgacccatcaatagacaaacatatgccacaatattttacttt |
7269757 |
T |
|
| Q |
112 |
acatcacttgtgaaacgaatcaatatcaatataaaaaacggtcgtaaaatctcatttttccactaatattctacaatgtaaatgtatattgaagtattca |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7269758 |
acatcacttgtgaaacgaatcaatatcaatataaaaaacggtcgtaaaatctcatttttccactaatattctacaatgtaaatgtatattgaagtattca |
7269857 |
T |
|
| Q |
212 |
agaggttgaatat |
224 |
Q |
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||||||||||||| |
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| T |
7269858 |
agaggttgaatat |
7269870 |
T |
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