View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10567_low_29 (Length: 215)
Name: NF10567_low_29
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10567_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33900269 - 33900065
Alignment:
| Q |
1 |
gtgttcccctttgcttattaatatgggattaaaacctgtgtttgatatagtttccattagttgagtgtagcttataatctttggatcataacgaatttct |
100 |
Q |
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| T |
33900269 |
gtgttcccctttgcttattaatatgggattaaaacctgtgtttgatatagtttccattagttgagtgtagcttataatctttggatcataacgaatttct |
33900170 |
T |
|
| Q |
101 |
gcttcttcagttgccaaggccacttgtgctatttgcaccccttgaagggattgaagaactgattgcacgttagaggagcaagaagtacaagtcatgcccc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33900169 |
gcttcttcagttgccaaggccacttgtgctatttgcaccccacgaagggattgaagaactgattgcacgttggaggagcaagaagtacaagtcatgcccc |
33900070 |
T |
|
| Q |
201 |
ctatg |
205 |
Q |
| |
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||||| |
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| T |
33900069 |
ctatg |
33900065 |
T |
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