View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10567_low_8 (Length: 340)
Name: NF10567_low_8
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10567_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 15 - 331
Target Start/End: Complemental strand, 43466276 - 43465960
Alignment:
| Q |
15 |
acaaactccaacataaccacctaaaacgactacatggaagcaccacaaaatgcacaagaggtgccactaggatcagtaatcactttacgcttaagtaggt |
114 |
Q |
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| T |
43466276 |
acaaactccaacataaccacctaaaacgactacatggaagcaccacaaattgcacaagaggtgccactaggatcagtaatcactttacgcttaagtaggt |
43466177 |
T |
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| Q |
115 |
tatgcagaattaccaaccttaaaaggtgacaataattcaacatcatgaaaagaatactagcctcctcagtagttctcctatccacgttagtagtgcaccc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
43466176 |
tatgcagaattaccaaccttaaaaggtgacaataattcaacatcatgaaaagaacactagcctccccagtagttctcctatccacgttagtagtgcaccc |
43466077 |
T |
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| Q |
215 |
accaccagcaaggaccgaatgaaccgacctaactgaataatacctggtatggttgttttcatacttgttagtcatttgttcaacacttcaacactaatta |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43466076 |
accaccagcaaggaccgaatgaaccgacctaactgaataatacctggtatggttgttttcatacttgttagtcatttgttcaacacttcaacactaatta |
43465977 |
T |
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| Q |
315 |
cttggttatattcatct |
331 |
Q |
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||||||||||||||||| |
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| T |
43465976 |
cttggttatattcatct |
43465960 |
T |
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