View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10567_low_9 (Length: 329)
Name: NF10567_low_9
Description: NF10567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10567_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 45675677 - 45675378
Alignment:
| Q |
14 |
agatacaccaaatctactttaaaacaatcaaacacatcaaaatcaatataacatctctaccgtcgattttgatcccttcaaagtgaacgaaacatacact |
113 |
Q |
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| T |
45675677 |
agatacaccaaatctactttaaaacaatcaaacacatcaaaatcaatataacatttctaccgtcgattttgatcccttcaaagtgaacgaaacatacact |
45675578 |
T |
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| Q |
114 |
caagcagcatatggtactagccatggagtatgtaaaattaaattaaaatactcacatttacattagatgaaatattaaagtttttacatactcctttctt |
213 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
45675577 |
caagcagcatatggtactagccatggagaatgtaaaattaaattaagatactcacatttacattagatgaaatattaaagtacgtacatactcctttctt |
45675478 |
T |
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| Q |
214 |
caattgagaataagagaaaacacagtacaaaatctttgggaaggggaaatatagagataagcaccgagtgagttcactacatagtagatgattacgaaat |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
45675477 |
caattgagaataagagaaaacacagtacaaaatctttgggaaagggaaatatagagataagcaccgagtgagttcacttcatagtagatgattacgaaat |
45675378 |
T |
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