View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10568_high_2 (Length: 237)
Name: NF10568_high_2
Description: NF10568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10568_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46303138 - 46302916
Alignment:
| Q |
1 |
aaaaatgattgacagatataaaagaacaagtaaaaaggaaaattactaatacatgcatattttttgactcaatgcatacacatccttggaaaaaataggc |
100 |
Q |
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| T |
46303138 |
aaaaatgattgacagatataaaagaacaagtaaaaaggaaaattactaatacatgcatattttttgactcaatgcatacacatccttggaaaaaataggc |
46303039 |
T |
|
| Q |
101 |
agtttaattaatcactatgcttgtgcaaattggaagtcaaaagcagcacctcacattgacaaaatattggattaaaggaaaattttcctttaaattacac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46303038 |
agtttaattaatcactatgcttgtgcaaattggaagtcaaaagcagcacctcacattgacaaaatattggattaaaggaaaattttcctttaaattacac |
46302939 |
T |
|
| Q |
201 |
tatttatatcaataaacaaaatt |
223 |
Q |
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||||||||||||||| ||||||| |
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| T |
46302938 |
tatttatatcaataatcaaaatt |
46302916 |
T |
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