View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10568_low_5 (Length: 250)
Name: NF10568_low_5
Description: NF10568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10568_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 46303507 - 46303743
Alignment:
| Q |
1 |
aaggaatttgtcaagcttgaaccttggtggtgagatatcaccagcaattggtgatttaagaaacttgcaatccatgtatgtcacctcttacttaacattc |
100 |
Q |
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| T |
46303507 |
aaggaatttgtcaagcttgaaccttggtggtgagatatcaccagcaattggtgatttaagaaacttgcaatccatgtatgtcacctcttacttaacattc |
46303606 |
T |
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| Q |
101 |
tatgcatctctcataatttagattgaagtcgtgttcactgctcgaaataacactgacccatgtcgttacatttaattgaatactttcatattctaaaaat |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46303607 |
tatgcatctctcatactttagattgaagtcgtgttcactgcttgaaataacactgacccatgtcgttacatttaattgaatactttcatattctaaaaat |
46303706 |
T |
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| Q |
201 |
ttacttgtgtcgatgtgttagtgtctcgtttgtgtct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
46303707 |
ttacttgtgtcgatgtgttagtgtctcgtttgtgtct |
46303743 |
T |
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