View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1056_high_50 (Length: 297)

Name: NF1056_high_50
Description: NF1056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1056_high_50
NF1056_high_50
[»] chr5 (40 HSPs)
chr5 (102-291)||(26319052-26319241)
chr5 (102-291)||(37094907-37095101)
chr5 (102-212)||(15799159-15799270)
chr5 (102-206)||(6156665-6156770)
chr5 (106-213)||(25746964-25747071)
chr5 (102-213)||(26190373-26190485)
chr5 (106-212)||(20891551-20891658)
chr5 (102-212)||(4064796-4064907)
chr5 (122-263)||(34440688-34440837)
chr5 (106-204)||(38871609-38871708)
chr5 (102-213)||(12465185-12465293)
chr5 (114-212)||(40620066-40620165)
chr5 (122-279)||(38640676-38640839)
chr5 (113-212)||(39524721-39524821)
chr5 (122-212)||(14111851-14111942)
chr5 (106-212)||(28083454-28083561)
chr5 (113-206)||(15957694-15957788)
chr5 (106-263)||(36359604-36359769)
chr5 (102-206)||(33487544-33487649)
chr5 (106-212)||(38372247-38372354)
chr5 (116-212)||(38692859-38692955)
chr5 (146-213)||(24203759-24203826)
chr5 (112-212)||(32842048-32842149)
chr5 (114-212)||(8032217-8032316)
chr5 (146-212)||(29862591-29862657)
chr5 (124-212)||(31221415-31221504)
chr5 (220-279)||(38640988-38641047)
chr5 (106-279)||(43388073-43388252)
chr5 (114-214)||(37183856-37183957)
chr5 (122-279)||(28445413-28445578)
chr5 (106-212)||(27212646-27212753)
chr5 (220-279)||(8739196-8739255)
chr5 (106-165)||(31929229-31929289)
chr5 (62-106)||(4064933-4064976)
chr5 (227-279)||(16429133-16429185)
chr5 (62-106)||(26318982-26319026)
chr5 (112-205)||(26095035-26095129)
chr5 (64-106)||(37095126-37095168)
chr5 (64-104)||(12464598-12464638)
chr5 (251-279)||(16429367-16429395)
[»] chr1 (45 HSPs)
chr1 (122-291)||(24471311-24471481)
chr1 (122-291)||(30829463-30829632)
chr1 (106-279)||(43319199-43319379)
chr1 (102-213)||(33611485-33611597)
chr1 (102-213)||(18583619-18583731)
chr1 (106-212)||(32817687-32817794)
chr1 (111-212)||(42545948-42546050)
chr1 (116-212)||(34162797-34162894)
chr1 (102-213)||(23442710-23442822)
chr1 (102-212)||(17000351-17000461)
chr1 (106-212)||(40650751-40650858)
chr1 (102-213)||(49786241-49786352)
chr1 (113-212)||(28866707-28866806)
chr1 (106-212)||(15069917-15070025)
chr1 (102-204)||(41584754-41584857)
chr1 (114-212)||(44573172-44573271)
chr1 (125-206)||(49677478-49677560)
chr1 (106-206)||(45046933-45047033)
chr1 (106-213)||(40908009-40908117)
chr1 (116-212)||(7011195-7011293)
chr1 (106-212)||(45567952-45568059)
chr1 (122-206)||(32542388-32542473)
chr1 (117-212)||(34006246-34006342)
chr1 (122-279)||(800806-800969)
chr1 (106-221)||(38950255-38950361)
chr1 (220-279)||(43318988-43319047)
chr1 (112-213)||(26723564-26723660)
chr1 (64-106)||(33611623-33611665)
chr1 (106-204)||(6223821-6223921)
chr1 (227-279)||(9446103-9446155)
chr1 (62-106)||(24471517-24471561)
chr1 (106-178)||(27794831-27794903)
chr1 (106-168)||(52744937-52745000)
chr1 (64-106)||(18583757-18583799)
chr1 (64-106)||(30829668-30829710)
chr1 (64-106)||(32542310-32542352)
chr1 (62-104)||(32542839-32542881)
chr1 (62-104)||(49786907-49786949)
chr1 (64-105)||(23442642-23442683)
chr1 (228-276)||(9445897-9445945)
chr1 (146-212)||(38885245-38885310)
chr1 (227-276)||(800603-800652)
chr1 (62-106)||(17000282-17000325)
chr1 (62-106)||(34162935-34162978)
chr1 (64-104)||(44937783-44937823)
[»] chr2 (24 HSPs)
chr2 (122-291)||(33366920-33367090)
chr2 (102-210)||(36949018-36949127)
chr2 (106-212)||(17474870-17474977)
chr2 (106-206)||(41510505-41510606)
chr2 (111-212)||(15995184-15995287)
chr2 (106-212)||(39447138-39447245)
chr2 (106-212)||(32187940-32188047)
chr2 (106-212)||(33452514-33452621)
chr2 (106-212)||(45153862-45153969)
chr2 (106-206)||(25217868-25217968)
chr2 (106-212)||(44465798-44465906)
chr2 (122-212)||(36874977-36875068)
chr2 (116-212)||(4268309-4268406)
chr2 (106-278)||(9847424-9847603)
chr2 (122-212)||(41854970-41855061)
chr2 (122-212)||(42894369-42894460)
chr2 (116-273)||(25715351-25715510)
chr2 (112-212)||(41203258-41203358)
chr2 (220-279)||(9847215-9847274)
chr2 (106-212)||(34517077-34517183)
chr2 (106-206)||(5507392-5507495)
chr2 (124-202)||(38308875-38308954)
chr2 (64-106)||(25715267-25715309)
chr2 (225-279)||(34519540-34519594)
[»] chr8 (31 HSPs)
chr8 (105-279)||(7971000-7971181)
chr8 (102-212)||(3094653-3094764)
chr8 (106-212)||(27928017-27928124)
chr8 (106-279)||(41530645-41530826)
chr8 (102-213)||(21004362-21004473)
chr8 (102-213)||(31519967-31520079)
chr8 (106-212)||(44106199-44106306)
chr8 (106-206)||(8885535-8885636)
chr8 (102-212)||(37248530-37248641)
chr8 (111-206)||(28916764-28916860)
chr8 (110-212)||(34853309-34853411)
chr8 (146-206)||(40994809-40994869)
chr8 (102-212)||(16310571-16310682)
chr8 (112-206)||(35676620-35676715)
chr8 (106-275)||(36404177-36404337)
chr8 (106-212)||(42280967-42281077)
chr8 (146-279)||(24627584-24627725)
chr8 (146-279)||(31234737-31234875)
chr8 (106-212)||(9073480-9073587)
chr8 (124-187)||(11698387-11698451)
chr8 (62-104)||(31519378-31519420)
chr8 (227-279)||(31234526-31234578)
chr8 (114-212)||(17119956-17120055)
chr8 (220-279)||(24627874-24627933)
chr8 (62-105)||(41530571-41530614)
chr8 (64-106)||(21004294-21004336)
chr8 (242-279)||(10833523-10833560)
chr8 (146-212)||(4259712-4259778)
chr8 (62-104)||(21004944-21004986)
chr8 (62-98)||(7971218-7971254)
chr8 (122-213)||(33472059-33472151)
[»] chr7 (33 HSPs)
chr7 (102-213)||(8154871-8154983)
chr7 (102-212)||(24042264-24042375)
chr7 (102-213)||(47202466-47202578)
chr7 (106-212)||(3936084-3936191)
chr7 (106-212)||(28230544-28230651)
chr7 (106-212)||(43737100-43737207)
chr7 (106-213)||(36629181-36629289)
chr7 (102-212)||(42925717-42925828)
chr7 (111-212)||(37518371-37518473)
chr7 (102-211)||(3304835-3304946)
chr7 (116-212)||(19225674-19225771)
chr7 (102-213)||(31643013-31643125)
chr7 (106-208)||(36408347-36408450)
chr7 (106-212)||(36468613-36468719)
chr7 (102-197)||(33574125-33574221)
chr7 (124-212)||(31985594-31985685)
chr7 (146-212)||(7115347-7115413)
chr7 (116-184)||(42877149-42877218)
chr7 (225-279)||(5731193-5731247)
chr7 (106-212)||(6467671-6467780)
chr7 (116-165)||(9151800-9151850)
chr7 (64-106)||(47202398-47202440)
chr7 (62-104)||(47203112-47203154)
chr7 (124-213)||(33151200-33151292)
chr7 (115-168)||(28349174-28349227)
chr7 (106-150)||(28346123-28346167)
chr7 (64-104)||(31643672-31643712)
chr7 (62-104)||(8155523-8155565)
chr7 (227-276)||(5730987-5731036)
chr7 (146-199)||(26555130-26555183)
chr7 (227-279)||(8214298-8214350)
chr7 (62-106)||(24042401-24042444)
chr7 (70-106)||(31642951-31642987)
[»] chr6 (22 HSPs)
chr6 (102-213)||(32035085-32035197)
chr6 (102-204)||(33413431-33413533)
chr6 (106-212)||(17264386-17264493)
chr6 (102-212)||(5699530-5699641)
chr6 (106-212)||(7412804-7412910)
chr6 (117-212)||(3717359-3717455)
chr6 (113-212)||(14587636-14587736)
chr6 (102-212)||(23406768-23406879)
chr6 (102-212)||(2813300-2813413)
chr6 (106-212)||(1945606-1945712)
chr6 (112-208)||(9905100-9905197)
chr6 (106-204)||(4508386-4508485)
chr6 (106-212)||(24604438-24604545)
chr6 (146-212)||(5638879-5638945)
chr6 (62-106)||(5638781-5638825)
chr6 (227-279)||(17501175-17501227)
chr6 (229-279)||(17500967-17501017)
chr6 (146-212)||(21517557-21517623)
chr6 (116-214)||(29289701-29289799)
chr6 (62-106)||(33413559-33413603)
chr6 (174-212)||(2539496-2539534)
chr6 (64-104)||(32044847-32044887)
[»] chr3 (47 HSPs)
chr3 (106-279)||(45244365-45244541)
chr3 (111-213)||(35142055-35142158)
chr3 (106-263)||(48303967-48304131)
chr3 (102-213)||(47301991-47302103)
chr3 (114-212)||(47740008-47740107)
chr3 (111-212)||(39149791-39149892)
chr3 (102-212)||(50716224-50716335)
chr3 (102-212)||(50796512-50796623)
chr3 (106-212)||(46622860-46622968)
chr3 (118-212)||(34821419-34821514)
chr3 (106-212)||(51258378-51258485)
chr3 (106-212)||(51540690-51540797)
chr3 (102-213)||(2358697-2358810)
chr3 (146-277)||(32025000-32025137)
chr3 (111-212)||(38977824-38977926)
chr3 (104-212)||(3902882-3902991)
chr3 (102-212)||(501216-501328)
chr3 (122-214)||(52777223-52777315)
chr3 (102-199)||(3937360-3937458)
chr3 (111-212)||(33438503-33438604)
chr3 (106-206)||(3352148-3352249)
chr3 (102-213)||(28872975-28873087)
chr3 (106-175)||(34821509-34821579)
chr3 (220-279)||(8735278-8735337)
chr3 (220-279)||(9087519-9087578)
chr3 (146-213)||(43473044-43473111)
chr3 (107-204)||(49096311-49096409)
chr3 (124-212)||(30721881-30721974)
chr3 (220-279)||(45244691-45244750)
chr3 (62-104)||(2358105-2358147)
chr3 (62-104)||(3938812-3938854)
chr3 (62-106)||(33700659-33700703)
chr3 (64-106)||(48303895-48303937)
chr3 (106-158)||(47123082-47123135)
chr3 (106-158)||(47130448-47130501)
chr3 (64-104)||(8657750-8657790)
chr3 (64-104)||(51258307-51258347)
chr3 (64-106)||(2358836-2358879)
chr3 (228-279)||(8735493-8735544)
chr3 (228-279)||(9087734-9087785)
chr3 (115-150)||(42936685-42936720)
chr3 (64-106)||(3937292-3937334)
chr3 (64-106)||(43473162-43473204)
chr3 (64-106)||(52777145-52777187)
chr3 (106-146)||(33701457-33701497)
chr3 (66-106)||(42936575-42936615)
chr3 (115-151)||(42937052-42937088)
[»] chr4 (44 HSPs)
chr4 (102-213)||(23523886-23523998)
chr4 (106-214)||(48319139-48319247)
chr4 (111-213)||(17933212-17933315)
chr4 (102-212)||(25539024-25539135)
chr4 (106-212)||(40703648-40703755)
chr4 (106-214)||(54631537-54631646)
chr4 (106-212)||(19835504-19835611)
chr4 (102-212)||(38536150-38536261)
chr4 (102-212)||(55052695-55052806)
chr4 (106-206)||(7931642-7931743)
chr4 (116-212)||(25491471-25491568)
chr4 (102-206)||(29822599-29822704)
chr4 (113-212)||(25752520-25752620)
chr4 (102-197)||(32441791-32441887)
chr4 (102-213)||(49396988-49397100)
chr4 (117-212)||(8106387-8106483)
chr4 (122-213)||(34972864-34972956)
chr4 (106-212)||(3703326-3703433)
chr4 (102-180)||(6228919-6228998)
chr4 (111-212)||(46440350-46440452)
chr4 (102-211)||(6003748-6003860)
chr4 (106-212)||(2506107-2506215)
chr4 (106-205)||(38416549-38416649)
chr4 (136-205)||(41413183-41413252)
chr4 (106-168)||(50392529-50392592)
chr4 (111-171)||(53894108-53894169)
chr4 (227-279)||(25140723-25140775)
chr4 (150-212)||(31582498-31582560)
chr4 (64-106)||(34972786-34972828)
chr4 (62-104)||(34973494-34973536)
chr4 (165-279)||(7817367-7817486)
chr4 (227-279)||(25140514-25140566)
chr4 (64-106)||(6003886-6003928)
chr4 (64-106)||(6229024-6229066)
chr4 (184-279)||(7794211-7794312)
chr4 (62-104)||(27631859-27631901)
chr4 (64-106)||(32441723-32441765)
chr4 (227-277)||(42660385-42660435)
chr4 (62-99)||(6228307-6228344)
chr4 (62-106)||(55052832-55052875)
chr4 (220-263)||(50392453-50392496)
chr4 (62-100)||(3703469-3703507)
chr4 (62-104)||(23524418-23524460)
chr4 (62-98)||(41412706-41412742)
[»] scaffold0137 (1 HSPs)
scaffold0137 (106-212)||(9573-9680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (114-212)||(142039-142138)
[»] scaffold0182 (1 HSPs)
scaffold0182 (106-212)||(23098-23205)
[»] scaffold0508 (1 HSPs)
scaffold0508 (116-212)||(3471-3568)
[»] scaffold0016 (1 HSPs)
scaffold0016 (220-279)||(205814-205873)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 26319052 - 26319241
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26319052 aatggagttacggatttttccggattttgttatccggaaacttccaaaatagggtgcgttacatgatgtttccggattacataatccgaaaaccccctaa 26319151  T
Q  202 acaccattttttccatggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcatctcac 291  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  26319152 acacccttttttccatggtgcaatccggattacgtaatccgtacagcaccagcaccaaatctgaacatgtttgtaacagtttcatatcac 26319241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 37095101 - 37094907
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 201  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||  |||| ||||| ||| |||    
T  37095101 aatggagttacggatttttccggattttgtaatccgaaaacttaaaaaataaggcgcgttacatgatgtttccggattaccaaatccgaaaa-cccttaa 37095003  T
Q  202 acaccattttttccatggtgcaatccggattacgtaattcggaca------gcaccagcaccaattctgaacatgtttgtaacagtttcatctcac 291  Q
    ||||| |||||||||||||||||||||||||||||||| || |||      |||||||||||||||||||||||||||||||||||||||| ||||    
T  37095002 acacccttttttccatggtgcaatccggattacgtaatccgaacagcaactgcaccagcaccaattctgaacatgtttgtaacagtttcatatcac 37094907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 15799159 - 15799270
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15799159 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccta 15799258  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  15799259 aacacccttttt 15799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 6156665 - 6156770
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6156665 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 6156764  T
Q  201 aacacc 206  Q
    ||||||    
T  6156765 aacacc 6156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 25746964 - 25747071
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 205  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  25746964 gagtaacggatttttccggattttctaatccggaaacttcaaaaatagggcgcgttacatgatgttttcggattacataatccggaaatcccctaaacac 25747063  T
Q  206 catttttt 213  Q
    ||||||||    
T  25747064 catttttt 25747071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 26190485 - 26190373
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    ||||||||||    
T  26190485 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaaacccccta 26190386  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  26190385 aacaccctttttt 26190373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 20891551 - 20891658
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  20891551 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaaca 20891650  T
Q  205 ccattttt 212  Q
    || |||||    
T  20891651 cccttttt 20891658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 4064907 - 4064796
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||| | ||||||||||    
T  4064907 aatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaacccccta 4064808  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  4064807 aacacccttttt 4064796  T

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Target: chr5; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 34440688 - 34440837
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc--attttttccatgg 219  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||   |||||| |||||    
T  34440688 cggattttgtaatccgaaaacttcaaaaataggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacaccctttttttttcatgg 34440787  T
Q  220 ------tgcaatccggattacgtaattcggacagcaccagcaccaattct 263  Q
          ||||||| |||||||||||||| |||||  ||||||||||||||    
T  34440788 tgctgatgcaatctggattacgtaattcagacagtgccagcaccaattct 34440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 38871609 - 38871708
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  38871609 gagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaaca 38871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 12465293 - 12465185
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||| | ||| ||||||    
T  12465293 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccggaaa-ccccta 12465198  T
Q  201 aacaccatttttt 213  Q
    |||||||||||||    
T  12465197 aacaccatttttt 12465185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 40620165 - 40620066
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||    
T  40620165 gatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccggaaaccccctaaacatcattttt 40620066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 279
Target Start/End: Original strand, 38640676 - 38640839
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt 220  Q
    |||||||| ||||| |||||  ||||||| |||||||||||| ||||| | | |||||||||||||| ||| ||||| |||||||| |||||| ||||||    
T  38640676 cggattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccc-taaacaccctttttttcatggt 38640774  T
Q  221 gc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||      ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  38640775 gctgatgcaatccggattacgtaatccggacagcaccaacaccaattctgaacatgtttataaca 38640839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 39524721 - 39524821
Alignment:
Q  113 ggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 211  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||||  | |||||||||||||||| ||||    
T  39524721 ggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattcggaaaccccctaaacaccctttt 39524820  T
Q  212 t 212  Q
    |    
T  39524821 t 39524821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 14111851 - 14111942
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttttt 14111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 28083561 - 28083454
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||| | |||||| |||||||    
T  28083561 gagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatccggaaaccctctaaaca 28083462  T
Q  205 ccattttt 212  Q
    || |||||    
T  28083461 cccttttt 28083454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 15957694 - 15957788
Alignment:
Q  113 ggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  15957694 ggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatccggaaaccccctaaacacc 15957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 263
Target Start/End: Complemental strand, 36359769 - 36359604
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||||| |||| ||||||||||||||| ||||  ||||||| |||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  36359769 gagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatctgaaaaccccctaaaca 36359670  T
Q  205 cc-attttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattct 263  Q
    ||  |||||| |||||      |||||||| ||||||||||| | |||| ||||| ||||||||||    
T  36359669 cctttttttttcatggtgttgatgcaatccagattacgtaatccagacaacaccatcaccaattct 36359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 33487544 - 33487649
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||||| | |||| |||||    
T  33487544 aatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccggaaactcccta 33487643  T
Q  201 aacacc 206  Q
    ||||||    
T  33487644 aacacc 33487649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 38372247 - 38372354
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||  | ||||||| |||| |    
T  38372247 gagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcggaaaccccttaaata 38372346  T
Q  205 ccattttt 212  Q
    || |||||    
T  38372347 cccttttt 38372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 38692955 - 38692859
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  38692955 tttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatccggaaa-cccctaaacacccttttt 38692859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 24203826 - 24203759
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 213  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  24203826 aaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttt 24203759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 32842149 - 32842048
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 210  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || || || ||||  |||||||||||| ||| ||||| |||||||| |||    
T  32842149 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacacccttt 32842050  T
Q  211 tt 212  Q
    ||    
T  32842049 tt 32842048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 8032217 - 8032316
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||| | ||||||||| |||||||||||||||||| ||| ||| |||||||||| |||||    
T  8032217 gattttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttttt 8032316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 29862591 - 29862657
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  29862591 aaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccattttt 29862657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 31221504 - 31221415
Alignment:
Q  124 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||| ||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||| | |||||| ||||||||| |||||    
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacacccttttt 31221415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 38640988 - 38641047
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  38640988 tgcaatctggattacataattcggacagcaccaacaccaattctgaacatgtttgtaaca 38641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 43388252 - 43388073
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattaca-taatctgaaaaccccctaaac 203  Q
    |||||||||||| ||  ||||||||||||||||||| ||  ||||||||||||| |||||||||  |  |  || | | ||||| ||||||| |||||||    
T  43388252 gagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgataatcac--atcaaaataatccgaaaacctcctaaac 43388155  T
Q  204 accattttttccatggtgc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||| |||||| ||||||||      ||||||||||||||||||| ||||| |||| |||||||||||||||| ||| |||||    
T  43388154 accctttttttcatggtgctgatgcaatccggattacgtaattcagacagtaccaacaccaattctgaacatatttataaca 43388073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 37183957 - 37183856
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||  ||||||||||||  ||||||||||||| |||||| ||||||||||| ||| | |||||||||||| | |||||| ||||||||| |||||    
T  37183957 gatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaaaccctctaaacacccttttt 37183858  T
Q  213 tc 214  Q
    ||    
T  37183857 tc 37183856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 279
Target Start/End: Complemental strand, 28445578 - 28445413
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccc--cctaaacaccattttttccatg 218  Q
    |||||||||||||||| |||  ||||||| ||||||||| || ||||  ||| | ||||| | |||| ||| ||||  |||||||||||||||||| |||    
T  28445578 cggattttgtaatccgaaaatctcaaaaaatagggcgcgctaaatgaatttttcagattataaaatccgaacaccctccctaaacaccattttttc-atg 28445480  T
Q  219 gt------gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||      ||| | ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  28445479 gtaccgatgcagttcggattacgtaatccggacatcaccagcacgaattctgaacatgtttgtaaca 28445413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 27212646 - 27212753
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||||| ||||| |||||||||||||||| |||  ||||||| ||||| |||||||||||| ||| |||||||||||| | ||| || |||| ||||    
T  27212646 gagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaacacaccctgaaca 27212745  T
Q  205 ccattttt 212  Q
    || |||||    
T  27212746 cccttttt 27212753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 8739255 - 8739196
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||| ||||||||||||| |  || |||||||||||||||||||||||||||||||||    
T  8739255 tgcaattcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaaca 8739196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 31929289 - 31929229
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacat 165  Q
    |||| |||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||    
T  31929289 gagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgcattacat 31929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 4064976 - 4064933
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  4064976 tccaaaaatgcccttgag-tttccggatttcataatccggaatgg 4064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 16429133 - 16429185
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||| |  ||||||||| |||||||||| |||||||||||||||    
T  16429133 cggattacgtaatccaaacagcaccaacaccaattctaaacatgtttgtaaca 16429185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 26318982 - 26319026
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||    
T  26318982 tccaaaaatgcccttgcggtttccggatttcataattcggaatgg 26319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 26095035 - 26095129
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 205  Q
    ||||||||| | |||||||||||||  ||||  |||||| ||| |||||||||||  | ||| |||||||||||||| ||| ||||| |||||||    
T  26095035 cggattttttctgattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacac 26095129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 37095168 - 37095126
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||  | |||||||||||||||||||    
T  37095168 caaaaatgcccttgaggttttcgaatttcataatccggaatgg 37095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 12464598 - 12464638
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  12464598 caaaaatgctcttgagatttctggattttataatccggaat 12464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 16429367 - 16429395
Alignment:
Q  251 cagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||||||||||||||||    
T  16429367 cagcaccaattctgaacatgtttgtaaca 16429395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 122 - 291
Target Start/End: Complemental strand, 24471481 - 24471311
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccc-taaacaccattttttccatggt 220  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttttttccatggt 24471382  T
Q  221 gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcatctcac 291  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  24471381 gtaatccggattacgtaattcggacagcaccagcatcaattctgaacatgtttgtaacagtttcatatcac 24471311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 122 - 291
Target Start/End: Complemental strand, 30829632 - 30829463
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggtg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttttttccatggtg 30829533  T
Q  222 caatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcatctcac 291  Q
    ||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  30829532 caatccaaattacgtaatccggacagcaccagcaccgattctgaacatgtttgtaacagtttcatatcac 30829463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 43319379 - 43319199
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  43319379 gagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatccgaaaaccccctaaaca 43319280  T
Q  205 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |  |||||| |||||      |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  43319279 ctctttttttcatggtgctgatgcaatccggattacgtaatccggacagcaccatcaccaattctgaacatgtttgtaaca 43319199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 33611597 - 33611485
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33611597 aatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaacccccta 33611498  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  33611497 aacaccctttttt 33611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 18583731 - 18583619
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  18583731 aatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaacccccta 18583632  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  18583631 aacaccttttttt 18583619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 32817794 - 32817687
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  32817794 gagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccctaaaca 32817695  T
Q  205 ccattttt 212  Q
    || |||||    
T  32817694 cccttttt 32817687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 42545948 - 42546050
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||| ||||||||||||| |||| ||    
T  42545948 acggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatccgaaaaccccctaagcaccctt 42546047  T
Q  210 ttt 212  Q
    |||    
T  42546048 ttt 42546050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 34162894 - 34162797
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  34162894 tttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacacccttttt 34162797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 23442710 - 23442822
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||  | |||||||| |    
T  23442710 aatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaacccccca 23442809  T
Q  201 aacaccatttttt 213  Q
    |||| | ||||||    
T  23442810 aacatcttttttt 23442822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 17000351 - 17000461
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaa-aatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||| ||||||||||||| | ||||||||||    
T  17000351 aatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccggaaacccccta 17000449  T
Q  201 aacaccattttt 212  Q
    ||||||||||||    
T  17000450 aacaccattttt 17000461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 40650858 - 40650751
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| | ||||||| ||||||    
T  40650858 gagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaaccccttaaaca 40650759  T
Q  205 ccattttt 212  Q
    ||||||||    
T  40650758 ccattttt 40650751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 49786241 - 49786352
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||| |||||||||||||||||| |||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||| | |||||||| |    
T  49786241 aatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccc-a 49786339  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  49786340 aacaccctttttt 49786352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 28866806 - 28866707
Alignment:
Q  113 ggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||   | |||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  28866806 ggatttttccggattttgtaatccggaactataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacacccttttt 28866707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 15070025 - 15069917
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataat-ctgaaaaccccctaaac 203  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||||| | |||| ||||||||||    
T  15070025 gagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatccggaaacccccctaaac 15069926  T
Q  204 accattttt 212  Q
    |||||||||    
T  15069925 accattttt 15069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 41584857 - 41584754
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||||  |||||||||||||| |||||||||||||| | ||||||||||    
T  41584857 aatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcggattacataatccggaaacccccta 41584758  T
Q  201 aaca 204  Q
    ||||    
T  41584757 aaca 41584754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 44573271 - 44573172
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| | ||| ||| ||||| || |||||    
T  44573271 gattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaatcccttaaactcctttttt 44573172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 49677478 - 49677560
Alignment:
Q  125 attttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacacc 49677560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 45047033 - 45046933
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||| ||||| | |||||||||||||||| ||||||||||| | ||||||||||||||    
T  45047033 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccccctaaaca 45046935  T
Q  205 cc 206  Q
    ||    
T  45046934 cc 45046933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 40908117 - 40908009
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||  | |||||| ||||||||||||||||||| | ||||| | |||||||||||| |||||||||||||| ||||||||||||||||    
T  40908117 gagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatccgaaaaccccctaaaca 40908018  T
Q  205 ccatttttt 213  Q
    || ||||||    
T  40908017 ccctttttt 40908009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 7011195 - 7011293
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaata--gggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||||| || |  ||||| |||||||||||||||| |||||||    
T  7011195 tttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaatccgaaaaccccctaaacatcattttt 7011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 45568059 - 45567952
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||| ||||||||| |||||||| |||  ||||||||| ||| ||||||||||||||||    
T  45568059 gagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatccgaaaaccccctaaaca 45567960  T
Q  205 ccattttt 212  Q
    || |||||    
T  45567959 cccttttt 45567952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 32542388 - 32542473
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||   ||||||||||||||||    
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacc 32542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 34006246 - 34006342
Alignment:
Q  117 ttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | |||||||| ||||||||||||||||| |||| ||||| |||||||| |||||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacacccttttt 34006342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 279
Target Start/End: Complemental strand, 800969 - 800806
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttcca---- 216  Q
    |||||||||||||||| |||  ||||||| |||||||| |||  |||| ||| ||||||| | |||| ||| |||||||||||||||||||||           
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacaccatttttttatggtg 800870  T
Q  217 -tggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
     |||||   ||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  800869 ttggtgatgtccggattacgtaacgcggactgcaccagcaccaattctgaacatgtttataaca 800806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 38950255 - 38950361
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 205  Q
    ||||||||||||||||| |||||||||||||         ||||||||||||||||||||||| ||| | |||||||||||| |||||| ||||||||||    
T  38950255 gagttacggatttttccagattttgtaatcc---------aaaaatagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacac 38950345  T
Q  206 cattttttccatggtg 221  Q
      |||||| |||||||    
T  38950346 tctttttttcatggtg 38950361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 43319047 - 43318988
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  43319047 tgcaatccggattacgtaatctggacaacaccagcaccaattctgaacatgtttgtaaca 43318988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 26723660 - 26723564
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 210  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | |||||||| ||||||     ||||||| ||| |||||||||||||| |||    
T  26723660 cggatttttttggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttt 26723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 33611665 - 33611623
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  33611665 caaaaatgcccttgaggtttctggatttcataatccagaatgg 33611623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 6223921 - 6223821
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa--tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 203  Q
    ||||||||||||||| || |||||  |||||| ||||||||||||  ||| |||| ||||||||| |||  ||||||||||||| ||| ||||| |||||    
T  6223921 gagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccgaacaccccataaac 6223822  T
Q  204 a 204  Q
    |    
T  6223821 a 6223821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9446155 - 9446103
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||| |||||    
T  9446155 cggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataaca 9446103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 24471561 - 24471517
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  24471561 tccaaaaatgtccttgaggtttccggatttcataatccggaatgg 24471517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 27794831 - 27794903
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggat 178  Q
    |||||| |||||||| | |||||||||||||| |||  ||||||||||||||| ||||||||| ||| |||||    
T  27794831 gagttatggattttttcagattttgtaatccgaaaatctcaaaaatagggcgctttacatgattttttcggat 27794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 52745000 - 52744937
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgat 168  Q
    |||| ||||||||||||| ||||||||||| | |||||||| ||||||||||||| ||||||||    
T  52745000 gagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 18583799 - 18583757
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  18583799 caaaaatgcccttgaggttttcggatttcataatccggaatgg 18583757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 30829710 - 30829668
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  30829710 caaaaatgcccttgaagtttccggatttcataatccggaatgg 30829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 32542310 - 32542352
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  32542310 caaaaatgccattgaggtttccggatttcataatccggaatgg 32542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 32542881 - 32542839
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  32542881 tccaaaaatacccttgaggtttccggatttcataatccggaat 32542839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 49786949 - 49786907
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  49786949 tccaaaaatgtccttgaggtttccggatttcataatccggaat 49786907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 23442642 - 23442683
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatg 105  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  23442642 caaaaatgcccttgaggtttccggatttcattatccggaatg 23442683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 9445945 - 9445897
Alignment:
Q  228 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 276  Q
    |||||||||||| |||||| |||||||||||||||| ||||| ||||||    
T  9445945 ggattacgtaatccggacaacaccagcaccaattctaaacatctttgta 9445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 38885245 - 38885310
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||| |||||| ||||||||||||||| | ||||||||||| | ||||||| |||||||| |||||    
T  38885245 aaaaagagggcgtgttacatgatgtttcag-attacataatccggaaaccccttaaacacccttttt 38885310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 800652 - 800603
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 276  Q
    ||||||||||||| |||||| ||||| |||||||||  ||||||||||||    
T  800652 cggattacgtaatccggacaacaccaacaccaattcaaaacatgtttgta 800603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 17000282 - 17000325
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||    
T  17000282 tccaaaaatgcccttgagttttc-ggatttcataatccagaatgg 17000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 34162978 - 34162935
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||    
T  34162978 tccaaaaatacccttgag-tttccggatttcataatccggaatgg 34162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 44937783 - 44937823
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||| |||||||||  |||||||||||||||||||    
T  44937783 caaaaatgccgttgaggttttcggatttcataatccggaat 44937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 122 - 291
Target Start/End: Original strand, 33366920 - 33367090
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc-attttttccatggt 220  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||| ||||||  |||||||||||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaataagacgcgttacatgatatttccggattacataatccgaaaacccccttaacaccttttttttccatggt 33367019  T
Q  221 gcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaacagtttcatctcac 291  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||    
T  33367020 gcaaaccggattacgtaatccggatagcaccagcaccaattctgaacatgtttgtaatagtttcatatcac 33367090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 36949127 - 36949018
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  36949127 aatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaacccccta 36949028  T
Q  201 aacaccattt 210  Q
    ||||||||||    
T  36949027 aacaccattt 36949018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 17474977 - 17474870
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17474977 gagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 17474878  T
Q  205 ccattttt 212  Q
    | ||||||    
T  17474877 caattttt 17474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 41510606 - 41510505
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  41510606 gagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatctggaaaccccctaaaca 41510507  T
Q  205 cc 206  Q
    ||    
T  41510506 cc 41510505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 15995287 - 15995184
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa--tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 208  Q
    |||| |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |    
T  15995287 acgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatccgaaaaccccctaaacaccct 15995188  T
Q  209 tttt 212  Q
    ||||    
T  15995187 tttt 15995184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 39447138 - 39447245
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  39447138 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatctggaaaccccataaaca 39447237  T
Q  205 ccattttt 212  Q
    || |||||    
T  39447238 cccttttt 39447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 32188047 - 32187940
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||| |||||    
T  32188047 gagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatccggaaacccccgaaaca 32187948  T
Q  205 ccattttt 212  Q
    ||||||||    
T  32187947 ccattttt 32187940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 33452621 - 33452514
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||| |||||||||    
T  33452621 gagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatccggaaactccctaaaca 33452522  T
Q  205 ccattttt 212  Q
    || |||||    
T  33452521 cccttttt 33452514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 45153969 - 45153862
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  45153969 gagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 45153870  T
Q  205 ccattttt 212  Q
    || |||||    
T  45153869 cccttttt 45153862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 25217968 - 25217868
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  25217968 gagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaa-cccctaaaca 25217870  T
Q  205 cc 206  Q
    ||    
T  25217869 cc 25217868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 44465906 - 44465798
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgat-gtttccggattacataatctgaaaaccccctaaac 203  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||| || | |||||||||||||    
T  44465906 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactccggaaaccccctaaac 44465807  T
Q  204 accattttt 212  Q
    ||| |||||    
T  44465806 acccttttt 44465798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 36874977 - 36875068
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||||| || ||||||||||||    
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccattttt 36875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 4268406 - 4268309
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  4268406 ttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacacccttttt 4268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 278
Target Start/End: Complemental strand, 9847603 - 9847424
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||| | |||||||||||||||| ||| || ||||||||||| ||| |||  | |||||    
T  9847603 gagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatccgaacaccatccaaaca 9847504  T
Q  205 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaac 278  Q
    || |||||| |||||      ||||||| ||||||||||||  ||||||||||| |||||||||| ||||| ||||||||    
T  9847503 ccttttttttcatggtgctgatgcaatctggattacgtaatctggacagcaccaacaccaattctaaacatatttgtaac 9847424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 41855061 - 41854970
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||| | |||||||||||||||| |||||    
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacacccttttt 41854970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 42894369 - 42894460
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||| | |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccattttt 42894460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 273
Target Start/End: Original strand, 25715351 - 25715510
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 214  Q
    ||||| |||| ||||||||||  |||  |||||| |||||||||||||| |||| ||| |||||||||||||| ||| ||     ||||||||||||||     
T  25715351 ttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataatccgaacac-----aaacaccattttttt 25715445  T
Q  215 catggtgc------aatccggattacgtaattcggacagcaccagcaccaattctgaacatgttt 273  Q
    ||||||||      ||||||||||||||||| |||||| ||||| |||||||||| |||||||||    
T  25715446 catggtgctgatgcaatccggattacgtaatccggacaacaccaacaccaattctaaacatgttt 25715510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 41203358 - 41203258
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 211  Q
    |||||||||||||||||||||||||||||||| |||||| |  | | | ||||| || |||| ||||||||||||| ||| ||||| |||||||| ||||    
T  41203358 cggatttttccggattttgtaatccggaaactacaaaaaaatagggtgctacataatttttctggattacataatccgaacaccccgtaaacaccctttt 41203259  T
Q  212 t 212  Q
    |    
T  41203258 t 41203258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 9847274 - 9847215
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  9847274 tgcaatccggattacgtaatctggacaacaccaacaccaattctgaacatgtttgtaaca 9847215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 34517077 - 34517183
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||| |||||| ||||||||||||||   ||| ||  ||||||||||||||||||||||| ||| ||||||||||||||  || ||||| ||||||    
T  34517077 gagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgat-ttttcggattacataatccaaataccccttaaaca 34517175  T
Q  205 ccattttt 212  Q
    ||||||||    
T  34517176 ccattttt 34517183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 5507392 - 5507495
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatga--tgtttccggattacataatctgaaaaccccctaaa 202  Q
    ||||||| ||||||| || ||||||||||||  ||||||| ||||||| | ||||||||||||  | ||| ||||||| |||||| ||| ||||||||||    
T  5507392 gagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaacaccccctaaa 5507491  T
Q  203 cacc 206  Q
    ||||    
T  5507492 cacc 5507495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 38308954 - 38308875
Alignment:
Q  124 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 202  Q
    |||| ||||||||| |||||||||||| ||||||||| ||  |||| ||||||||||| |||||| ||| ||||| ||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacaccccttaaa 38308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 25715267 - 25715309
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  25715267 caaaaatgcccttgaagtttccggattttataatccggaatgg 25715309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 34519594 - 34519540
Alignment:
Q  225 tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||||| |  || |||||| || |||||||||||||||||||||||    
T  34519594 tccggattacgtaatccaaactgcaccaacatcaattctgaacatgtttgtaaca 34519540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 105 - 279
Target Start/End: Complemental strand, 7971181 - 7971000
Alignment:
Q  105 ggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatg-tttccggattacataatctgaaaaccccctaaac 203  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||| |||| |||||||||||||  || ||||| |||||    
T  7971181 ggagttacggatttttccggattttgtaatctggaaacttcaaaaataggacgcgctacgtgatgttttctggattacataatccaaacaccccataaac 7971082  T
Q  204 accattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||| ||||||||||||      |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7971081 acccttttttccatggtgctgatgcaatccggattacgtaatccggacagcaccagcatcaattctgaacatgtttgtaaca 7971000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 3094653 - 3094764
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  3094653 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccggattacataatccggaaacccccta 3094752  T
Q  201 aacaccattttt 212  Q
    ||||||||||||    
T  3094753 aacaccattttt 3094764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 27928124 - 27928017
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27928124 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcaggaaaccccctaaaca 27928025  T
Q  205 ccattttt 212  Q
    ||||||||    
T  27928024 ccattttt 27928017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 279
Target Start/End: Original strand, 41530645 - 41530826
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatga-tgtttccggattacataatctgaaaaccccctaaac 203  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||| | ||| | |||||||||||||||| ||||||||||     
T  41530645 gagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatctgaacaccccctaaaa 41530744  T
Q  204 accattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||| |||||| |||||      |||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||||||    
T  41530745 accctttttttcatggtgctgttgcaatccggattacgtaatccggacatcaccatcaccaattttgaacatgtttgtaaca 41530826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 21004362 - 21004473
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaac-ttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||    
T  21004362 aatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaaaactcccta 21004460  T
Q  201 aacaccatttttt 213  Q
    |||||||||||||    
T  21004461 aacaccatttttt 21004473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 31520079 - 31519967
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  31520079 aatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccggattacataatccggaaacccccta 31519980  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  31519979 aacaccctttttt 31519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 44106199 - 44106306
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  44106199 gagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 44106298  T
Q  205 ccattttt 212  Q
    || |||||    
T  44106299 cccttttt 44106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 8885636 - 8885535
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  8885636 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 8885537  T
Q  205 cc 206  Q
    ||    
T  8885536 cc 8885535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 37248530 - 37248641
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||| ||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||   ||||||||||    
T  37248530 aatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccagaaacccccta 37248629  T
Q  201 aacaccattttt 212  Q
    ||||||||||||    
T  37248630 aacaccattttt 37248641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 28916764 - 28916860
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| | | ||||||||||||||||    
T  28916764 acgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaaccggaaaccccctaaacacc 28916860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 34853309 - 34853411
Alignment:
Q  110 tacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 208  Q
    ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |    
T  34853309 tacgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatctggaaaccctctaaacaccct 34853407  T
Q  209 tttt 212  Q
    ||||    
T  34853408 tttt 34853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 40994809 - 40994869
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994809 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 40994869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 16310571 - 16310682
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||   |||| |||||    
T  16310571 aatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaaactcccta 16310670  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  16310671 aacacccttttt 16310682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 35676715 - 35676620
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacacc 206  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||| |||||||||||||||||| ||| ||||||||| ||||    
T  35676715 cggatttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccctaaccacc 35676620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 36404337 - 36404177
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||||||| ||||||||||||||||||| ||| ||  |||||||||||| |||||||||| ||| ||||||| |||||| ||||| | ||||||||    
T  36404337 gagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatccgaaaa-ctcctaaaca 36404240  T
Q  205 ccattttttccatggtgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgt 275  Q
    || |||||| ||||||||        | | | ||| |||||||||||||||||||||||||||||||||||    
T  36404239 ccctttttttcatggtgc--------tgatgcaatccggacagcaccagcaccaattctgaacatgtttgt 36404177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 42281077 - 42280967
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacat---gatgtttccggattacataatctgaaaaccccctaa 201  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||   ||||||||| |||||||||||| | |||||||||||    
T  42281077 gagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataatccggaaaccccctaa 42280978  T
Q  202 acaccattttt 212  Q
    ||||| |||||    
T  42280977 acacccttttt 42280967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 24627584 - 24627725
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc--catggtgc------aatccggattacgta 237  Q
    ||||||||| |||| ||  |||| ||| ||||||| | |||| ||| |||||||||||||||||||||   ||||||||      |||||||||||||||    
T  24627584 aaaaataggacgcgctatttgattttttcggattatagaatccgaataccccctaaacaccatttttttttcatggtgctgatgcaatccggattacgta 24627683  T
Q  238 attcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    || |||||| ||||||||||||||||||| ||||||||||||    
T  24627684 atccggacaacaccagcaccaattctgaatatgtttgtaaca 24627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 31234875 - 31234737
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt------gcaatccggattacgtaat 239  Q
    |||||||||||||| || || || ||| ||||||| | |||| ||| | |||||||||||||||||||| |||||      ||| | |||||||||||||    
T  31234875 aaaaatagggcgcgctatataattttttcggattatagaatccgaacaacccctaaacaccattttttc-atggtactgatgcagttcggattacgtaat 31234777  T
Q  240 tcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
     |||||||||| ||||||||||||||||||||| ||||||    
T  31234776 ccggacagcactagcaccaattctgaacatgttcgtaaca 31234737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 9073480 - 9073587
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||| |||| |||||||  |||||||||||||||||||| || |   ||||||||||||||||||||||||||||||   ||||||||||||||    
T  9073480 gagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatccagaaaccccctaaaca 9073579  T
Q  205 ccattttt 212  Q
    || |||||    
T  9073580 cctttttt 9073587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 11698451 - 11698387
Alignment:
Q  124 gattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatc 187  Q
    ||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatc 11698387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 31519378 - 31519420
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31519378 tccaaaaatgcccttgaggtttccggatttcataatccggaat 31519420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 31234578 - 31234526
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||| || ||| |||||||||||||||||||||| |||||||||    
T  31234578 cggattacgtaatccgaacaacaccagcaccaattctgaacatatttgtaaca 31234526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 17120055 - 17119956
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||| |||||| | ||||||| |||||||||||| | ||||||| ||  |||| ||| ||| ||| |||||||||| ||||| ||||||||||||||    
T  17120055 gattttttcggattatataatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccattttt 17119956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 24627874 - 24627933
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||| ||||||||| |||||||||| | || || ||||||||||||||||||||||||||    
T  24627874 tgcagtccggattaagtaattcggataacatcaacaccaattctgaacatgtttgtaaca 24627933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 41530571 - 41530614
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatg 105  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  41530571 tccaaaaatgcccttgaagtttctggattttataatccggaatg 41530614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 21004294 - 21004336
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  21004294 caaaaatgcccttgaggtttccagatttcataatccggaatgg 21004336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 10833560 - 10833523
Alignment:
Q  242 ggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10833560 ggactgcaccagcaccaattctgaacatgtttgtaaca 10833523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 4259778 - 4259712
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||| ||| | |||| ||| ||||||| ||||| |||  ||||||||||||||||||||    
T  4259778 aaaaatagggcgtgttccttgattttttcggattatataatttgagcaccccctaaacaccattttt 4259712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 21004986 - 21004944
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  21004986 tccaaaaatgcccttgaggttttcgaatttcataatccggaat 21004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 7971254 - 7971218
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatc 98  Q
    |||||||||||||||||||||||  ||||||||||||    
T  7971254 tccaaaaatgcccttgaggtttccagatttcataatc 7971218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 33472059 - 33472151
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 213  Q
    |||||| | ||||||| |||| |||||| |||||||||| ||  |||| ||| ||||||| | ||||| |  |||||||||||||||||||||    
T  33472059 cggattctataatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattatagaatctaaccaccccctaaacaccatttttt 33472151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 8154871 - 8154983
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8154871 aatgaagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccta 8154970  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  8154971 aacaccctttttt 8154983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 24042375 - 24042264
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||    
T  24042375 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccggaaacccccta 24042276  T
Q  201 aacaccattttt 212  Q
    ||||||||||||    
T  24042275 aacaccattttt 24042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 47202466 - 47202578
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  47202466 aatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 47202565  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  47202566 aacaccctttttt 47202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 3936084 - 3936191
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3936084 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccaaaaaccccctaaaca 3936183  T
Q  205 ccattttt 212  Q
    || |||||    
T  3936184 cccttttt 3936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 28230651 - 28230544
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  28230651 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaaca 28230552  T
Q  205 ccattttt 212  Q
    || |||||    
T  28230551 cccttttt 28230544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 43737100 - 43737207
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  43737100 gagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaaca 43737199  T
Q  205 ccattttt 212  Q
    || |||||    
T  43737200 cccttttt 43737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 36629181 - 36629289
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  36629181 gagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccctctaaaca 36629280  T
Q  205 ccatttttt 213  Q
    |||||||||    
T  36629281 ccatttttt 36629289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 42925828 - 42925717
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| | ||||||||||    
T  42925828 aatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccggaaacccccta 42925729  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  42925728 aacacctttttt 42925717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 37518473 - 37518371
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  37518473 acggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatccggaaaccccctaaacaccatt 37518374  T
Q  210 ttt 212  Q
    |||    
T  37518373 ttt 37518371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 3304946 - 3304835
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca--aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| | |||||||||| ||||||||||||||||||  |||||||||     
T  3304946 aatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaaaaacccccc 3304847  T
Q  200 aaacaccatttt 211  Q
    ||||||| ||||    
T  3304846 aaacaccctttt 3304835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 19225771 - 19225674
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  19225771 tttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaatcccctaaacaccattttt 19225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 31643013 - 31643125
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||||||||||||| |||| |||||||  |||||||||||||| ||||| | ||||||||||||||||||||||||||||| | |||||||| |    
T  31643013 aatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccggaaacccccca 31643112  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  31643113 aacaccctttttt 31643125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 36408347 - 36408450
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||| | ||||| | ||||||    
T  36408347 gagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaaca 36408446  T
Q  205 ccat 208  Q
    ||||    
T  36408447 ccat 36408450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 36468719 - 36468613
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||| | |||||||||||| | ||||||||||||||    
T  36468719 gagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgttt-cagattacataatccggaaaccccctaaaca 36468621  T
Q  205 ccattttt 212  Q
    || |||||    
T  36468620 cccttttt 36468613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 33574221 - 33574125
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccc 197  Q
    |||| ||||| ||||||||  |||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||| |||||||||    
T  33574221 aatgaagttatggatttttttggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccc 33574125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 31985685 - 31985594
Alignment:
Q  124 gattttgtaatccggaaacttcaaaaa---tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||||| |||| |||||||   |||||||||||||||||| ||| |||||||||||||  ||| ||||| ||||||||||||||    
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccattttt 31985594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 7115413 - 7115347
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||| ||||||| |||| ||| || |||| |||||||||||||||||||||||||||||||    
T  7115413 aaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacaccattttt 7115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 42877218 - 42877149
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacata 184  Q
    |||||||||||||||||||| ||||| |  ||||| ||||||||||||||| ||||||||||||||||||    
T  42877218 tttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgtttccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 5731247 - 5731193
Alignment:
Q  225 tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||| |||||    
T  5731247 tccggattacgtaatcgggacagcaccaacaccaattctgaacatgtttataaca 5731193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 6467671 - 6467780
Alignment:
Q  106 gagttacggatttttccggattttgtaa--tccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 202  Q
    |||||||||||||||||| ||| |||||  ||| ||||  ||||||| ||||| | |||||||||| | | |||||||||||||| ||| ||||||||||    
T  6467671 gagttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaa 6467770  T
Q  203 caccattttt 212  Q
    |||| |||||    
T  6467771 cacccttttt 6467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 9151800 - 9151850
Alignment:
Q  116 tttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacat 165  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9151800 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacat 9151850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 47202398 - 47202440
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  47202398 caaaaatgcccttgaggtttccggatttcataatccggaatgg 47202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 47203154 - 47203112
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  47203154 tccaaaaatgcccttgaggtttccggatttcataatccggaat 47203112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 33151200 - 33151292
Alignment:
Q  124 gattttgtaatccggaaacttcaaaa--atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac-catttttt 213  Q
    ||||||||||| ||||||||| ||||  ||||||||| ||| ||||||| | |||||||||||||| | ||| ||||||||||| ||||||||    
T  33151200 gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataatccggaaatcccctaaacactcatttttt 33151292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 28349227 - 28349174
Alignment:
Q  115 atttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgat 168  Q
    |||||||||||||||||||| || ||||||||||||||||| | | ||||||||    
T  28349227 atttttccggattttgtaattcgaaaacttcaaaaatagggtgtgctacatgat 28349174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 28346123 - 28346167
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa 150  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||    
T  28346123 gagttacggatgtttccgaattttgtaatccagaaacttcaaaaa 28346167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 31643712 - 31643672
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  31643712 caaaaatgcccttgaggtttccggctttcataatccggaat 31643672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 8155565 - 8155523
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||| |||||||||||| |||||||||||||| ||||    
T  8155565 tccaaaaatgtccttgaggtttccggatttcataatccagaat 8155523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 5731036 - 5730987
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgta 276  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||    
T  5731036 cggattacgtaatcaggacaccaccagcaacaattctaaacatgtttgta 5730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 26555183 - 26555130
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 199  Q
    ||||||||||||||||||||||| |||  ||||||| ||||| ||| |||||||    
T  26555183 aaaaatagggcgcgttacatgatttttttggattacctaatccgaacaccccct 26555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 8214350 - 8214298
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||  || ||| || ||||||||||||||||||||| ||||    
T  8214350 cggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaaca 8214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 24042444 - 24042401
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  24042444 tccaaaaatgcccttga-gtttctgaatttcataattcggaatgg 24042401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 31642951 - 31642987
Alignment:
Q  70 tgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  31642951 tgcccttgaggtttccggatttcataatctggaatgg 31642987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 32035085 - 32035197
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  32035085 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 32035184  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  32035185 aacaccctttttt 32035197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 33413533 - 33413431
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaa 201  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  33413533 aatggagttacgaatttttctgaattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccagattacataatctggaaaccccctaa 33413434  T
Q  202 aca 204  Q
    |||    
T  33413433 aca 33413431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 17264386 - 17264493
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17264386 gagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 17264485  T
Q  205 ccattttt 212  Q
    || |||||    
T  17264486 cccttttt 17264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 5699530 - 5699641
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  5699530 aatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacccccta 5699629  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  5699630 aacacccttttt 5699641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 7412804 - 7412910
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7412804 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatccgaaaa-cccctaaaca 7412902  T
Q  205 ccattttt 212  Q
    || |||||    
T  7412903 cccttttt 7412910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 3717455 - 3717359
Alignment:
Q  117 ttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||    
T  3717455 ttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaattttt 3717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 14587736 - 14587636
Alignment:
Q  113 ggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 211  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  14587736 ggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatccataaaccccctaaacaccatttt 14587637  T
Q  212 t 212  Q
    |    
T  14587636 t 14587636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 23406768 - 23406879
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||  |||||||| |||| |||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||| | ||||||||||    
T  23406768 aatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccggaaacccccta 23406867  T
Q  201 aacaccattttt 212  Q
    ||||||||||||    
T  23406868 aacaccattttt 23406879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 2813413 - 2813300
Alignment:
Q  102 aatggagttacggatttttccggat--tttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccc 198  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||| | ||||||||    
T  2813413 aatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccggaaaccccc 2813314  T
Q  199 taaacaccattttt 212  Q
    |||||||| |||||    
T  2813313 taaacacccttttt 2813300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 1945712 - 1945606
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |  ||||||||||| |||||||||| | |||||||||     
T  1945712 gagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaaca-cccctaaacc 1945614  T
Q  205 ccattttt 212  Q
    ||||||||    
T  1945613 ccattttt 1945606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 9905100 - 9905197
Alignment:
Q  112 cggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccat 208  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||| ||| |||| |||||||||||||||||| ||| ||||||||||| ||||    
T  9905100 cggatttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccat 9905197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 4508485 - 4508386
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||| |||||| |||||||||||||||||||||| |||||| | ||| ||||||||||    
T  4508485 gagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccggaaatcccctaaaca 4508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 24604545 - 24604438
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||| ||||||||||| ||||||||||||  |||||||||||| |||||||  ||||||||| | | |||||||||||||| ||| ||||| ||||||    
T  24604545 gagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacaccccttaaaca 24604446  T
Q  205 ccattttt 212  Q
    ||||||||    
T  24604445 ccattttt 24604438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 5638879 - 5638945
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| |||||    
T  5638879 aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacacccttttt 5638945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 5638781 - 5638825
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  5638781 tccaaaaatgcccttgaggtttccggatttcataatccggaatgg 5638825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 17501175 - 17501227
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  17501175 cggattacgtaatccggacagcatcaggaccaattctgaacatgtttgtaaca 17501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 17500967 - 17501017
Alignment:
Q  229 gattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  17500967 gattacgtaatccggacaacaccagcaccaaatctgaacatgtttgtaaca 17501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 21517623 - 21517557
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||| | ||||| ||||||||||||||||||||  | ||||||| ||||||||||||||    
T  21517623 aaaaatagggcgtgctacataatgtttccggattacataattcggaaaccccttaaacaccattttt 21517557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 29289799 - 29289701
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 214  Q
    ||||| |||||||||||||| | || | | ||||||||| | || ||  |||| ||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29289799 ttttttcggattttgtaatctgaaaccctaaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacaccattttttc 29289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 33413603 - 33413559
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||    
T  33413603 tccaaaaatgcctttgatgtttccggatttcataatccggaatgg 33413559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 2539496 - 2539534
Alignment:
Q  174 cggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  2539496 cggattacataatctggaaaccccctaaacacccttttt 2539534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 32044887 - 32044847
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||  ||||||||||||| |||||    
T  32044887 caaaaatgcccttgaggttttcggatttcataatctggaat 32044847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 279
Target Start/End: Original strand, 45244365 - 45244541
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||| |||||||||||||||||||||| || |||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    |||||    
T  45244365 gagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaacc----aaaca 45244460  T
Q  205 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    || |||||| |||||      ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  45244461 ccctttttttcatggtgctgatgcaatctggattacgtaatccggacagcacgagcaccaattctgaacatgtttgtaaca 45244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 35142055 - 35142158
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaat-agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  35142055 acggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatt 35142154  T
Q  210 tttt 213  Q
    ||||    
T  35142155 tttt 35142158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 106 - 263
Target Start/End: Original strand, 48303967 - 48304131
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||| | |||||||||| ||| | |||||||||||| ||||||||||| ||||    
T  48303967 gagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatccgaaaaccccctcaaca 48304066  T
Q  205 ccattttttccatgg------tgcaatccggattacgtaattcggacagcaccagcaccaattct 263  Q
    ||||||||| |||||      |||||||||||||||||||| | |||||||||| ||||||||||    
T  48304067 ccatttttttcatggtggtgatgcaatccggattacgtaatccagacagcaccatcaccaattct 48304131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 47301991 - 47302103
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  47301991 aatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaaaacctccta 47302090  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  47302091 aacaccctttttt 47302103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 47740107 - 47740008
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  47740107 gatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 47740008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 39149791 - 39149892
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattt 210  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||||||| | ||||||||||||||||||||    
T  39149791 acggatttttccggattttgtaatccagaaactcaaaaaatagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccattt 39149890  T
Q  211 tt 212  Q
    ||    
T  39149891 tt 39149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 50716224 - 50716335
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  50716224 aatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 50716323  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  50716324 aacacccttttt 50716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 50796623 - 50796512
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  50796623 aatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 50796524  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  50796523 aacacccttttt 50796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 46622968 - 46622860
Alignment:
Q  106 gagttacggatttttccggattttgtaat-ccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 203  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  46622968 gagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaaccccctaaac 46622869  T
Q  204 accattttt 212  Q
    |||||||||    
T  46622868 accattttt 46622860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 34821514 - 34821419
Alignment:
Q  118 tttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccattttt 34821419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 51258378 - 51258485
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||| || ||| |||||||||||||| ||| ||||||||||||    
T  51258378 gagttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatccgaacaccccctaaaca 51258477  T
Q  205 ccattttt 212  Q
    ||||||||    
T  51258478 ccattttt 51258485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 51540797 - 51540690
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||    
T  51540797 gagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaaca 51540698  T
Q  205 ccattttt 212  Q
    || |||||    
T  51540697 ccgttttt 51540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 2358810 - 2358697
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca--aaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 199  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||| | |||||| |     
T  2358810 aatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccggaaaccctcc 2358711  T
Q  200 aaacaccatttttt 213  Q
    ||||||| ||||||    
T  2358710 aaacaccctttttt 2358697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 32025000 - 32025137
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggt------gcaatccggattacgtaat 239  Q
    |||||||||||||  || ||||| ||| ||||||| | |||||||| ||||||||||||||||||||| ||||||      ||| | |||||||||||||    
T  32025000 aaaaatagggcgcactatatgattttttcggattatagaatctgaacaccccctaaacaccatttttttcatggtcctgatgcagttcggattacgtaat 32025099  T
Q  240 tcggacagcaccagcaccaattctgaacatgtttgtaa 277  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32025100 tcggacaacaccagcaccaattctgaacatgtttgtaa 32025137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 38977926 - 38977824
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||||||||||||||| ||    
T  38977926 acggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatccgaaaaccccctaaacaccttt 38977827  T
Q  210 ttt 212  Q
    |||    
T  38977826 ttt 38977824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 3902991 - 3902882
Alignment:
Q  104 tggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaa 202  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||  ||||||||||||| | ||||||||||||    
T  3902991 tggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccggaaaccccctaaa 3902892  T
Q  203 caccattttt 212  Q
    |||| |||||    
T  3902891 cacccttttt 3902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 501328 - 501216
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataat-ctgaaaaccccct 199  Q
    |||||||||| |  |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  501328 aatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattgcataatccggaaaaccccct 501229  T
Q  200 aaacaccattttt 212  Q
    ||||||| |||||    
T  501228 aaacacctttttt 501216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 52777223 - 52777315
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttttc 214  Q
    |||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||  | |||||||||||||||| |||||||    
T  52777223 cggattttgtaatccggaaacttcaaaaatagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttc 52777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 3937360 - 3937458
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccct 199  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||| ||||    
T  3937360 aatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcgaaaacaccct 3937458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 33438503 - 33438604
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    ||||||||||| | ||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||| || |||||| | ||||||||||    
T  33438503 acggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatg-ttccggattacataatgtggaaaccctcaaaacaccatt 33438601  T
Q  210 ttt 212  Q
    |||    
T  33438602 ttt 33438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 3352249 - 3352148
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||| ||||||||  ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  3352249 gagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaaca 3352150  T
Q  205 cc 206  Q
    ||    
T  3352149 cc 3352148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 28872975 - 28873087
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||| |||||||  |||||| ||||||| ||||||| ||| |||||||| |||| |||||||||| |||||||||||||||||||||  | |||||||||    
T  28872975 aatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaacaacccccta 28873074  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  28873075 aacaccctttttt 28873087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 34821579 - 34821509
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccg 175  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  34821579 gagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttccg 34821509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 8735278 - 8735337
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  8735278 tgcaatccagattacgaaattcggacagcaccagcaccaattctgaacatgtttataaca 8735337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 9087519 - 9087578
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9087519 tgcaatccagattacgaaattcggacagcaccagcaccaattctgaacatgtttataaca 9087578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 43473111 - 43473044
Alignment:
Q  146 aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 213  Q
    ||||||| || || |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  43473111 aaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccatttttt 43473044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 49096409 - 49096311
Alignment:
Q  107 agttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||| |||  |||||||||| ||| || |||||||||||  || ||||||||||||    
T  49096409 agttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatccaaacaccccctaaaca 49096311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 30721974 - 30721881
Alignment:
Q  124 gattttgtaatccggaaacttca-aaaatagggcgc---gttacatgatgtttccggattacataatctgaaaac-cccctaaacaccattttt 212  Q
    |||||||||||||| |||||||| ||||||||||||    ||||||||| ||| |||||||||||||| ||| || ||||||||||||||||||    
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccattttt 30721881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 45244691 - 45244750
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||||||||||| |||||    
T  45244691 tgcaatccggattacgtaatccggacaataccatcaccaattctgaacatgtttataaca 45244750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 2358105 - 2358147
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2358105 tccaaaaatgcccttgaggtttccggatttcataatccggaat 2358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 3938854 - 3938812
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  3938854 tccaaaaatgcccttgaggtttccggatttcataatccggaat 3938812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 33700659 - 33700703
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  33700659 tccaaaaatgtccttgaagtttctggatttcataatccggaatgg 33700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 48303895 - 48303937
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  48303895 caaaaatgcccttgaggtttccagatttcataatccggaatgg 48303937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 47123082 - 47123135
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgc 158  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  47123082 gagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 47130448 - 47130501
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgc 158  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  47130448 gagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 8657790 - 8657750
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  8657790 caaaaatgtccttgaggtttccggatttcataatccggaat 8657750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 51258307 - 51258347
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  51258307 caaaaatgtccttgaagtttctggatttcataatccggaat 51258347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 2358879 - 2358836
Alignment:
Q  64 caaaaatgcccttgaggtttct-ggatttcataatccggaatgg 106  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  2358879 caaaaatgcccttgaggtttcccggatttcataatccggaatgg 2358836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 8735493 - 8735544
Alignment:
Q  228 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||| |||||| || || |||||||| |||||||||||||||||    
T  8735493 ggattacgtaatccggacaacatcaacaccaattatgaacatgtttgtaaca 8735544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 9087734 - 9087785
Alignment:
Q  228 ggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||| |||||| || || |||||||| |||||||||||||||||    
T  9087734 ggattacgtaatccggacaacatcaacaccaattatgaacatgtttgtaaca 9087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 42936685 - 42936720
Alignment:
Q  115 atttttccggattttgtaatccggaaacttcaaaaa 150  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42936685 atttttccggattttgtaatccgaaaacttcaaaaa 42936720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 3937292 - 3937334
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||    
T  3937292 caaaaatgcccttgaggtttccggattttataatccagaatgg 3937334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 43473204 - 43473162
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  43473204 caaaaatgtccttgaggtttccgaatttcataatccggaatgg 43473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 52777145 - 52777187
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||  ||||||||||||| |||||||    
T  52777145 caaaaatgcccttgaggttttcggatttcataatctggaatgg 52777187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 33701497 - 33701457
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttca 146  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  33701497 gagttacgaatttttccggattacgtaatccggaaacttca 33701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 42936575 - 42936615
Alignment:
Q  66 aaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||| ||||||| ||||| |||||||||||||||||||||    
T  42936575 aaaatacccttgaagtttccggatttcataatccggaatgg 42936615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 42937088 - 42937052
Alignment:
Q  115 atttttccggattttgtaatccggaaacttcaaaaat 151  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  42937088 attttttcggattttgtaatccggaaacatcaaaaat 42937052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 23523886 - 23523998
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||   ||||||||||    
T  23523886 aatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccagaaacccccta 23523985  T
Q  201 aacaccatttttt 213  Q
    |||||| ||||||    
T  23523986 aacaccctttttt 23523998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 48319247 - 48319139
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  48319247 gagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatccgaaaaccccctaaaca 48319149  T
Q  205 ccattttttc 214  Q
    || |||||||    
T  48319148 cctttttttc 48319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 17933315 - 17933212
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||    
T  17933315 acggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccttaaacaccctt 17933216  T
Q  210 tttt 213  Q
    ||||    
T  17933215 tttt 17933212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 25539135 - 25539024
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||| | ||||||||||    
T  25539135 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaacccccta 25539036  T
Q  201 aacaccattttt 212  Q
    ||||| ||||||    
T  25539035 aacactattttt 25539024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 40703648 - 40703755
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  40703648 gagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacctgaaaaccccctaaaca 40703747  T
Q  205 ccattttt 212  Q
    || |||||    
T  40703748 cccttttt 40703755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 54631646 - 54631537
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54631646 gagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 54631547  T
Q  205 ccattttttc 214  Q
    |  |||||||    
T  54631546 catttttttc 54631537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 19835504 - 19835611
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  19835504 gagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatccggaaaccccctaaaca 19835603  T
Q  205 ccattttt 212  Q
    || |||||    
T  19835604 cccttttt 19835611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 38536150 - 38536261
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  38536150 aatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaacccccta 38536249  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  38536250 aacacctttttt 38536261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 55052806 - 55052695
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||| | ||||||||||    
T  55052806 aatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccggaaacccccta 55052707  T
Q  201 aacaccattttt 212  Q
    |||||| |||||    
T  55052706 aacacccttttt 55052695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 7931642 - 7931743
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  7931642 gagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatccggaaaccccctaaaca 7931741  T
Q  205 cc 206  Q
    ||    
T  7931742 cc 7931743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 25491568 - 25491471
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  25491568 ttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacacctttttt 25491471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 29822599 - 29822704
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||||| | ||||||| ||    
T  29822599 aatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccggaaaccccata 29822698  T
Q  201 aacacc 206  Q
    ||||||    
T  29822699 aacacc 29822704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 25752620 - 25752520
Alignment:
Q  113 ggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttt 211  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  25752620 ggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttt 25752521  T
Q  212 t 212  Q
    |    
T  25752520 t 25752520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 32441791 - 32441887
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccc 197  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  32441791 aatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccggaaacccc 32441887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 49396988 - 49397100
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttc-aaaaatagggcgcgttacatgatgtttccggattacataatctgaaaacccccta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||  ||||||||||||| ||||| ||| ||    
T  49396988 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgtttttggattacataatccgaaaatccctta 49397087  T
Q  201 aacaccatttttt 213  Q
    |||| ||||||||    
T  49397088 aacatcatttttt 49397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 8106387 - 8106483
Alignment:
Q  117 ttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||| ||||||||||| ||| ||||||||||||||||||||    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccattttt 8106483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 34972864 - 34972956
Alignment:
Q  122 cggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatttttt 213  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  34972864 cggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccatttttt 34972956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 3703433 - 3703326
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| |||| || |||||||||| ||| |||||||||||||  ||| ||||||||||||    
T  3703433 gagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaaca 3703334  T
Q  205 ccattttt 212  Q
    ||||||||    
T  3703333 ccattttt 3703326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 6228998 - 6228919
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtttccggatta 180  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6228998 aatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 6228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 46440452 - 46440350
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccatt 209  Q
    |||| |||||||| ||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | |||||||||||||||| ||    
T  46440452 acgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctt 46440353  T
Q  210 ttt 212  Q
    |||    
T  46440352 ttt 46440350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 6003860 - 6003748
Alignment:
Q  102 aatggagttacggatttttccggattttgtaatccggaaacttcaaaaata---gggcgcgttacatgatgtttccggattacataatctgaaaaccccc 198  Q
    ||||||||||||||||||| || ||||| |||||||||||||| ||||| |   | | ||||||||||||||||||||||||||||||| | ||||||||    
T  6003860 aatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccggaaaccccc 6003761  T
Q  199 taaacaccatttt 211  Q
    |||||||| ||||    
T  6003760 taaacaccttttt 6003748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 2506215 - 2506107
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaat--agggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaac 203  Q
    |||| ||||||||||||  ||||||| || | ||||| |||||||   |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  2506215 gagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaac 2506116  T
Q  204 accattttt 212  Q
    ||| |||||    
T  2506115 acccttttt 2506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 38416549 - 38416649
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaa-atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||| ||||||||| |  |||||||||||||||||| | |||| ||||||| ||||||||||| ||| |||||||||||||| ||| ||||||||||||    
T  38416549 gagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcggattacataatccgaacaccccctaaaca 38416648  T
Q  205 c 205  Q
    |    
T  38416649 c 38416649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 41413252 - 41413183
Alignment:
Q  136 cggaaacttcaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacac 205  Q
    |||||||||||||||   || ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41413252 cggaaacttcaaaaaataggagcgttacatgatgtttccggattacataatccggaaaccccctaaacac 41413183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 50392592 - 50392529
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaa-cttcaaaaatagggcgcgttacatgat 168  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||    
T  50392592 gagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 53894169 - 53894108
Alignment:
Q  111 acggatttttccggattttgtaatccggaaacttca-aaaatagggcgcgttacatgatgtt 171  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  53894169 acgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 25140775 - 25140723
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  25140775 cggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaaca 25140723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 31582560 - 31582498
Alignment:
Q  150 atagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||| ||||||||||||| | |||||||||||| | |||||||||||||||| |||||    
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacacccttttt 31582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 34972786 - 34972828
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  34972786 caaaaatgcccttgaggtttccggatttcataatccggaatgg 34972828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 34973536 - 34973494
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  34973536 tccaaaaatgcccttgaggtttctgggtttcataatccggaat 34973494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 7817486 - 7817367
Alignment:
Q  165 tgatgtttccggattacataatctgaaaaccccctaaacaccattttttccatggtgcaa------tccggattacgtaattcggacagcaccagcacca 258  Q
    |||| ||| ||||||| | |||||||| |||| ||||||||||||||||| |||||||        ||| |||||||||||  ||||||||||| |||||    
T  7817486 tgattttttcggattaaagaatctgaacaccctctaaacaccattttttc-atggtgctggtgatgtccagattacgtaatctggacagcaccaacacca 7817388  T
Q  259 attctgaacatgtttgtaaca 279  Q
    ||||||||||||||| |||||    
T  7817387 attctgaacatgtttataaca 7817367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 25140566 - 25140514
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||| | |||| || ||||||||||||||||||||||||||    
T  25140566 cggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaaca 25140514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 6003928 - 6003886
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  6003928 caaaaatatccttgaggtttctggatttcataatccggaatgg 6003886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 6229066 - 6229024
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  6229066 caaaaatgtccttgaggtttcaggatttcataatccggaatgg 6229024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 7794312 - 7794211
Alignment:
Q  184 aatctgaaaaccccctaaacaccattttttccatggtgcaa------tccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaa 277  Q
    |||||||| |||| |||||||||||||||| ||||||||        ||| |||||||||||||||||| ||||| |||||||| ||||||| ||| |||    
T  7794312 aatctgaacaccctctaaacaccatttttttcatggtgctggtgctgtccagattacgtaattcggacaacaccaacaccaattttgaacatatttataa 7794213  T
Q  278 ca 279  Q
    ||    
T  7794212 ca 7794211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 27631859 - 27631901
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  27631859 tccaaaaatgcccttgaggtttccagatttcataatccggaat 27631901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 32441723 - 32441765
Alignment:
Q  64 caaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  32441723 caaaaatacccttgaggtttccggatttcataatccggaatgg 32441765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 42660435 - 42660385
Alignment:
Q  227 cggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaa 277  Q
    ||||||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  42660435 cggattatgtaatccggatagcaccagcaccaattctgagcatgtttgtaa 42660385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 6228307 - 6228344
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatcc 99  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  6228307 tccaaaaatgcccttgaggtttccggatttcataatcc 6228344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 55052875 - 55052832
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaatgg 106  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  55052875 tccaaaaatgcccttgag-tttccggatttcataatccggaatgg 55052832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 50392496 - 50392453
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattct 263  Q
    |||||||||||||||||||| | |||||||||| ||||||||||    
T  50392496 tgcaatccggattacgtaatccagacagcaccatcaccaattct 50392453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 3703507 - 3703469
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccg 100  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  3703507 tccaaaaatgcccttgaagtttccggatttcataatccg 3703469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 23524460 - 23524418
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatccggaat 104  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  23524460 tccaaaaatgcccttgaggtttccagattttataatccggaat 23524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 41412706 - 41412742
Alignment:
Q  62 tccaaaaatgcccttgaggtttctggatttcataatc 98  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  41412706 tccaaaaatgctcttgaggtttttggatttcataatc 41412742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 9680 - 9573
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  9680 gagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaaaaccccctgaaca 9581  T
Q  205 ccattttt 212  Q
    || |||||    
T  9580 cccttttt 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 142138 - 142039
Alignment:
Q  114 gatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  142138 gatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 142039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 23098 - 23205
Alignment:
Q  106 gagttacggatttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaaca 204  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||| | ||||||||||||||    
T  23098 gagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccctaaaca 23197  T
Q  205 ccattttt 212  Q
    || |||||    
T  23198 cctttttt 23205  T

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Target: scaffold0508 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 3568 - 3471
Alignment:
Q  116 tttttccggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccattttt 212  Q
    ||||| || |||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  3568 ttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacacccttttt 3471  T

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Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 205873 - 205814
Alignment:
Q  220 tgcaatccggattacgtaattcggacagcaccagcaccaattctgaacatgtttgtaaca 279  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  205873 tgcaatccggattacgtaatccagacatcaccagcaccaattctgaacatgtttgtaaca 205814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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