View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1056_low_59 (Length: 317)
Name: NF1056_low_59
Description: NF1056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1056_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 32 - 313
Target Start/End: Complemental strand, 45641466 - 45641185
Alignment:
| Q |
32 |
aaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttct |
131 |
Q |
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| T |
45641466 |
aaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttct |
45641367 |
T |
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| Q |
132 |
ctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactaccagttgacccattagggttttccaatacatttggacgcgaaaaaca |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641366 |
ctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactactagttgacccattagggttttccaatacatttggacgcgaaaaaca |
45641267 |
T |
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| Q |
232 |
aaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctatgctactc |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
45641266 |
aaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctctgctactc |
45641185 |
T |
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