View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1056_low_80 (Length: 269)

Name: NF1056_low_80
Description: NF1056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1056_low_80
NF1056_low_80
[»] chr5 (26 HSPs)
chr5 (1-260)||(14706082-14706341)
chr5 (124-172)||(36796628-36796676)
chr5 (124-160)||(499652-499688)
chr5 (121-172)||(10771806-10771857)
chr5 (121-168)||(11615572-11615619)
chr5 (121-172)||(19177546-19177597)
chr5 (124-170)||(17369306-17369352)
chr5 (122-168)||(27153259-27153305)
chr5 (124-172)||(13508541-13508589)
chr5 (120-172)||(31723906-31723958)
chr5 (124-170)||(20982133-20982179)
chr5 (124-170)||(34198524-34198570)
chr5 (124-166)||(42034167-42034209)
chr5 (124-165)||(14331474-14331515)
chr5 (48-170)||(14714683-14714810)
chr5 (115-172)||(40335785-40335842)
chr5 (124-161)||(41419431-41419468)
chr5 (124-161)||(41534550-41534587)
chr5 (128-172)||(4855796-4855840)
chr5 (124-156)||(14932413-14932445)
chr5 (124-164)||(28578954-28578994)
chr5 (124-172)||(32194013-32194061)
chr5 (120-172)||(33961784-33961836)
chr5 (118-170)||(35135567-35135619)
chr5 (114-170)||(37968980-37969035)
chr5 (124-160)||(39594920-39594956)
[»] chr1 (33 HSPs)
chr1 (123-172)||(29793618-29793667)
chr1 (121-170)||(5157175-5157224)
chr1 (124-172)||(4757439-4757487)
chr1 (124-172)||(6292593-6292641)
chr1 (117-172)||(33723296-33723351)
chr1 (125-170)||(10199330-10199375)
chr1 (128-173)||(15515656-15515701)
chr1 (120-172)||(9602571-9602623)
chr1 (122-154)||(18403126-18403158)
chr1 (124-172)||(24460322-24460370)
chr1 (124-172)||(48748516-48748564)
chr1 (125-168)||(2522701-2522744)
chr1 (129-172)||(25944542-25944585)
chr1 (128-171)||(32958739-32958782)
chr1 (119-170)||(51929378-51929429)
chr1 (118-172)||(3597196-3597250)
chr1 (134-172)||(43420359-43420397)
chr1 (125-169)||(6279503-6279547)
chr1 (124-172)||(6659781-6659829)
chr1 (124-172)||(7217995-7218043)
chr1 (124-172)||(15558312-15558360)
chr1 (124-172)||(15784897-15784945)
chr1 (122-166)||(18327065-18327109)
chr1 (128-172)||(28837278-28837322)
chr1 (123-163)||(30257794-30257834)
chr1 (124-164)||(30259407-30259447)
chr1 (124-172)||(33976279-33976327)
chr1 (124-172)||(34536259-34536307)
chr1 (128-172)||(35017683-35017727)
chr1 (124-160)||(41505787-41505823)
chr1 (124-172)||(44115826-44115874)
chr1 (116-160)||(48282235-48282279)
chr1 (124-172)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (121-169)||(32730166-32730214)
chr7 (125-171)||(529464-529510)
chr7 (124-166)||(47046029-47046071)
chr7 (124-161)||(30812250-30812287)
chr7 (118-170)||(3836598-3836650)
chr7 (120-172)||(8427114-8427166)
chr7 (124-172)||(47041960-47042008)
chr7 (124-171)||(1418521-1418568)
chr7 (121-160)||(9210934-9210973)
chr7 (124-169)||(5276594-5276639)
chr7 (124-169)||(7513663-7513708)
chr7 (119-160)||(19302479-19302520)
chr7 (126-163)||(46946017-46946054)
chr7 (124-160)||(11619079-11619115)
chr7 (120-172)||(12234806-12234858)
chr7 (124-172)||(23214956-23215004)
chr7 (124-172)||(29363609-29363657)
chr7 (114-166)||(31341242-31341294)
chr7 (124-160)||(33266407-33266443)
chr7 (124-160)||(33673190-33673226)
chr7 (123-167)||(33871347-33871391)
chr7 (124-172)||(40598406-40598454)
chr7 (120-172)||(44289960-44290012)
[»] chr4 (26 HSPs)
chr4 (125-172)||(1017129-1017176)
chr4 (124-187)||(24193618-24193681)
chr4 (121-172)||(32420976-32421027)
chr4 (122-172)||(18628472-18628522)
chr4 (128-172)||(18512440-18512484)
chr4 (124-160)||(27043751-27043787)
chr4 (108-172)||(56186803-56186867)
chr4 (117-172)||(22845620-22845674)
chr4 (124-170)||(1075561-1075607)
chr4 (122-172)||(19305027-19305077)
chr4 (124-170)||(28259376-28259422)
chr4 (124-172)||(7367975-7368023)
chr4 (121-160)||(8420908-8420948)
chr4 (125-165)||(10365883-10365923)
chr4 (124-160)||(15173224-15173260)
chr4 (124-160)||(17822786-17822822)
chr4 (124-168)||(17975258-17975302)
chr4 (124-172)||(19429391-19429439)
chr4 (124-172)||(28615435-28615483)
chr4 (124-172)||(32071964-32072012)
chr4 (124-160)||(42403944-42403980)
chr4 (124-172)||(44320050-44320098)
chr4 (120-172)||(47146045-47146097)
chr4 (124-160)||(49940088-49940124)
chr4 (128-172)||(54277248-54277292)
chr4 (124-172)||(55870263-55870311)
[»] chr3 (17 HSPs)
chr3 (120-172)||(22667504-22667556)
chr3 (120-172)||(22724143-22724195)
chr3 (124-172)||(20210849-20210897)
chr3 (124-172)||(21872216-21872264)
chr3 (124-159)||(26990146-26990181)
chr3 (121-168)||(41848634-41848681)
chr3 (124-171)||(51929843-51929890)
chr3 (118-160)||(16072956-16072998)
chr3 (124-170)||(31512486-31512532)
chr3 (123-160)||(26911704-26911741)
chr3 (127-172)||(33965412-33965457)
chr3 (124-172)||(20173811-20173859)
chr3 (122-170)||(24158435-24158483)
chr3 (124-160)||(25447166-25447202)
chr3 (124-172)||(32663739-32663787)
chr3 (124-172)||(37138383-37138431)
chr3 (124-172)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (124-172)||(13866979-13867027)
chr2 (124-172)||(22878199-22878247)
chr2 (119-168)||(43985314-43985363)
chr2 (128-168)||(3458700-3458740)
chr2 (124-172)||(15370244-15370292)
chr2 (120-172)||(28803447-28803499)
chr2 (124-172)||(40759261-40759309)
chr2 (124-164)||(40837358-40837398)
chr2 (124-172)||(41170711-41170759)
chr2 (124-171)||(18525162-18525209)
chr2 (124-171)||(28810373-28810420)
chr2 (121-172)||(40158819-40158870)
chr2 (135-169)||(29430862-29430896)
chr2 (124-169)||(1830143-1830188)
chr2 (124-169)||(8017538-8017583)
chr2 (123-172)||(21616580-21616629)
chr2 (124-173)||(26372648-26372697)
chr2 (128-161)||(41516949-41516982)
chr2 (124-168)||(3078529-3078573)
chr2 (124-160)||(18179062-18179098)
chr2 (124-160)||(27317492-27317528)
chr2 (124-160)||(30331864-30331900)
chr2 (124-172)||(35329739-35329787)
chr2 (124-160)||(40059382-40059418)
chr2 (124-160)||(40085282-40085318)
chr2 (124-172)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (124-171)||(4560604-4560651)
chr8 (126-173)||(10560147-10560194)
chr8 (103-168)||(34290974-34291039)
chr8 (120-168)||(1821934-1821982)
chr8 (120-168)||(1856379-1856427)
chr8 (124-172)||(7714343-7714391)
chr8 (124-172)||(9700102-9700150)
chr8 (124-172)||(18331815-18331863)
chr8 (122-170)||(22705031-22705079)
chr8 (124-160)||(38602440-38602476)
chr8 (124-170)||(2606152-2606198)
chr8 (124-166)||(8060775-8060817)
chr8 (118-172)||(43368615-43368669)
chr8 (123-172)||(1561378-1561427)
chr8 (127-172)||(6950423-6950468)
chr8 (128-172)||(1892149-1892193)
chr8 (124-172)||(2487929-2487977)
chr8 (124-172)||(7008699-7008747)
chr8 (124-172)||(10488564-10488612)
chr8 (124-172)||(14926903-14926951)
chr8 (124-172)||(16162861-16162909)
chr8 (120-172)||(20186381-20186433)
chr8 (120-172)||(20205448-20205500)
chr8 (118-166)||(29168776-29168824)
chr8 (124-160)||(30251375-30251411)
chr8 (124-168)||(32976478-32976522)
chr8 (128-172)||(39881646-39881690)
chr8 (120-172)||(43393689-43393741)
chr8 (120-160)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (124-170)||(13908343-13908389)
chr6 (124-170)||(31776193-31776239)
chr6 (124-172)||(8420117-8420166)
chr6 (120-172)||(12111068-12111120)
chr6 (129-172)||(6742912-6742955)
chr6 (129-172)||(7351597-7351640)
chr6 (118-172)||(2732160-2732216)
chr6 (125-170)||(17241082-17241127)
chr6 (123-172)||(26559159-26559208)
chr6 (124-172)||(738462-738510)
chr6 (134-170)||(3750100-3750136)
chr6 (124-172)||(4325226-4325274)
chr6 (124-172)||(8010458-8010506)
chr6 (124-172)||(10016724-10016772)
chr6 (124-160)||(20861619-20861655)
chr6 (124-160)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-170)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 14706082 - 14706341
Alignment:
Q  1 aaatataatcatgctactacaagaagaaattggatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcacccaaaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706082 aaatataatcatgctactacaagacgaaattgaatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcacccaaaa 14706181  T
Q  101 caaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttggagagttgtataag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14706182 caaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgagatgtgaaactatttgaagagttgtataag 14706281  T
Q  201 ctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataat 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706282 ctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataat 14706341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 36796628 - 36796676
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36796628 tttggattgacttatttgagcttatctaatgacataaacacttgtgaga 36796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 499652 - 499688
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||||||||||||||||    
T  499652 tttggattgacttatttgagcttacctactgacataa 499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 10771806 - 10771857
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  10771806 ctatttggattggcttatttgagcttatctactggcataagcacttgtgaga 10771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 11615572 - 11615619
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  11615572 ctatttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 19177597 - 19177546
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||| ||||||| || ||| |||||||||||||    
T  19177597 ctatttggattgacttatttgagtttacctattggcatgaacacttgtgaga 19177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 17369352 - 17369306
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||    
T  17369352 tttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 27153259 - 27153305
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  27153259 tatttggattgacttctttgagcttacctactggcaaaaacacttgt 27153305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 13508589 - 13508541
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||    
T  13508589 tttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 31723958 - 31723906
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||    
T  31723958 cctatttggattgacttatttgagcttatgtactagcataaacacttatgaga 31723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 20982133 - 20982179
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  20982133 tttggattggcttatttgagcttatctactgtcgtaaacacttgtga 20982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 34198570 - 34198524
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||    
T  34198570 tttggattgacttatttgagtttatttactaacataaacacttgtga 34198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 42034209 - 42034167
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacactt 166  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  42034209 tttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 14331515 - 14331474
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacact 165  Q
    |||||||||||||||||||||||| |||||| ||||| ||||    
T  14331515 tttggattgacttatttgagcttatctactgtcataagcact 14331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 14714683 - 14714810
Alignment:
Q  48 tcatagccaaagcattccggagaccaatt-actacaaaataatggcacccaaaacaaa---ttgtgaaactaaagacc-tatttggattgacttatttga 142  Q
    |||||||||||| || ||||| || |||| | || |||||||||||||| |||| |||   ||||||||||||||  | | |||| |||| || ||||||    
T  14714683 tcatagccaaagtatgccggaaacaaatttagtaaaaaataatggcaccaaaaaaaaaaagttgtgaaactaaagggcatgtttgaattggctcatttga 14714782  T
Q  143 gcttacctactgacataaacacttgtga 170  Q
    ||||| | |||||||||| |||||||||    
T  14714783 gcttatccactgacataagcacttgtga 14714810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 40335785 - 40335842
Alignment:
Q  115 aaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||| ||| |||||||||||||||||||| ||| |||||  || ||||||||||||||    
T  40335785 aaaggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgaga 40335842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 41419468 - 41419431
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaa 161  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41419468 tttggattgacttatttgagctaatctactgacataaa 41419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 41534587 - 41534550
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaa 161  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41534587 tttggattgacttatttgagctaatctactgacataaa 41534550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 4855840 - 4855796
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||  || |||| |||||||||||||||    
T  4855840 gattgacttatttgagcttatataatgacttaaacacttgtgaga 4855796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 14932445 - 14932413
Alignment:
Q  124 tttggattgacttatttgagcttacctactgac 156  Q
    |||||||||||||||||||||||| ||||||||    
T  14932445 tttggattgacttatttgagcttatctactgac 14932413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 28578994 - 28578954
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacac 164  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  28578994 tttgaattgacttatttgagcttatctactgacaaaaacac 28578954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 32194013 - 32194061
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| ||| ||| ||||  ||||||||||    
T  32194013 tttggattgacttatttgagcttaactaatgatataagaacttgtgaga 32194061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 33961836 - 33961784
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||| ||||||||||||| |||| ||||||| ||||| |||||    
T  33961836 cctatttgaattgaattatttgagcttatctacggacataagcacttatgaga 33961784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 35135567 - 35135619
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||| |||||||| |||||||| |||||  |||||||||||| |||||||||    
T  35135567 gacctgtttggattaacttatttcagcttctctactgacataaccacttgtga 35135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 37969035 - 37968980
Alignment:
Q  114 taaagacctatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||||  ||||||||    
T  37969035 taaagacctatctggat-gacttgtttgagcttatctactgacataagtacttgtga 37968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 39594956 - 39594920
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| |||| |||||||    
T  39594956 tttggattgacttatttgagcttatctaccgacataa 39594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 29793618 - 29793667
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29793618 atttgtattgacttatttgagcttatctactgacataaacacttgtgaga 29793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 5157224 - 5157175
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5157224 ctatttggattgacttatttgaacttatctacggacataaacacttgtga 5157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 4757487 - 4757439
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgaga 4757439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 6292641 - 6292593
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  6292641 tttggattgacttatttgagcttatctactgacataagcacttttgaga 6292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 33723296 - 33723351
Alignment:
Q  117 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||| ||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  33723296 agacctgtttggattgacttatttgaacttatctactaccataaacacttgtgaga 33723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 10199330 - 10199375
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtga 10199375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 15515701 - 15515656
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgagaa 173  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgagaa 15515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 9602571 - 9602623
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||| |||||||| ||||| || ||| |||||||||||    
T  9602571 cctatttggattgacttatctgagcttatctactaacttaagcacttgtgaga 9602623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 18403126 - 18403158
Alignment:
Q  122 tatttggattgacttatttgagcttacctactg 154  Q
    |||||||||||||||||||||||||||||||||    
T  18403126 tatttggattgacttatttgagcttacctactg 18403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 24460322 - 24460370
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||    
T  24460322 tttggattgacttatttgaacttatctactgacatgagcacttgtgaga 24460370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 48748516 - 48748564
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||||    
T  48748516 tttgaattgacttatttgagcttatccattgacataaacacttgtgaga 48748564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 2522744 - 2522701
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgt 2522701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 25944585 - 25944542
Alignment:
Q  129 attgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  25944585 attgacttatttgcgcttatttactgacataaacacttgtgaga 25944542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 32958782 - 32958739
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||    
T  32958782 gattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 51929378 - 51929429
Alignment:
Q  119 acctatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||| ||||||||||||| |||||||||| |||||||||||| ||| |||||    
T  51929378 acctctttggattgacttttttgagcttatctactgacataagcacctgtga 51929429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 3597196 - 3597250
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||| |||||||||||    
T  3597196 gacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgaga 3597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 43420397 - 43420359
Alignment:
Q  134 cttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgaga 43420359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 6279547 - 6279503
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||    
T  6279547 ttggagtgacttatttcagcttaactactgacataagcacttgtg 6279503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 6659829 - 6659781
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||| |||||| |||||  ||||| |||||||||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgaga 6659781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 7217995 - 7218043
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||| |||||| |||| | ||||||||||| |||||    
T  7217995 tttggattgacttatttaagcttatctaccggcataaacacttctgaga 7218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 15558360 - 15558312
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||| ||||||||||||| | |||| | |||||||||||||||    
T  15558360 tttggattgagttatttgagcttatcgactggcttaaacacttgtgaga 15558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 15784945 - 15784897
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||| ||||    
T  15784945 tttggattgacttatttgagcttatttactgtcataaaaacttgcgaga 15784897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 18327065 - 18327109
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacactt 166  Q
    ||||||||||| |||||||||||||| |||||| ||||| |||||    
T  18327065 tatttggattggcttatttgagcttatctactgtcataagcactt 18327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 28837278 - 28837322
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||    
T  28837278 gattggcttatttgagcttatctactgacataagcacttgagaga 28837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 30257834 - 30257794
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaaca 163  Q
    ||||||||| ||||||||||| ||| |||||||||||||||    
T  30257834 atttggatttacttatttgagtttatctactgacataaaca 30257794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 30259407 - 30259447
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacac 164  Q
    |||||||||||||||||||| |||||||| | |||||||||    
T  30259407 tttggattgacttatttgagtttacctaccggcataaacac 30259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 33976327 - 33976279
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||||  || |||||| | |||||||||||    
T  33976327 tttggattgacttatttgagcttatttaatgacatcagcacttgtgaga 33976279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 34536307 - 34536259
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||| |||||||||||| | || ||| ||||||||||||||||||||    
T  34536307 tttggaatgacttatttgaacgtatctattgacataaacacttgtgaga 34536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 35017727 - 35017683
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||    
T  35017727 gattggcttatttgagcttatctattggcataaacacttgtgaga 35017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 41505823 - 41505787
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  41505823 tttggattggcttatttgagcttatctactgacataa 41505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 44115826 - 44115874
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||| ||||||||| || |||  ||||||||||    
T  44115826 tttggattgacttatttgagtttacctactcacttaagtacttgtgaga 44115874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 48282279 - 48282235
Alignment:
Q  116 aagacctatttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||| ||||| |||||| |||||||||||||||||| |||||    
T  48282279 aagacctgtttgggttgactaatttgagcttacctactggcataa 48282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 52014036 - 52013988
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||| ||| || ||||||||| |||||||    
T  52014036 tttggattaacttatttgagcttatctattggcataaacacgtgtgaga 52013988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 32730166 - 32730214
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  32730166 ctatttcgattgacttatttgagcttacctactgacataaacatttgtg 32730214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 47046029 - 47046071
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacactt 166  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046029 tttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 30812287 - 30812250
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaa 161  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30812287 tttggattgacttatttgagtttacctactgacataaa 30812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 3836598 - 3836650
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| |||||||||    
T  3836598 gacctatttggattgccttatttgagcttatctactggcttaagcacttgtga 3836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 8427166 - 8427114
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||    
T  8427166 cctatttggattgatttatttgagcttatctactaacataagtacttgtgaga 8427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 47041960 - 47042008
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||    
T  47041960 tttggattgacttatttgagcatatctattgacattaacacttgtgaga 47042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 1418568 - 1418521
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  1418568 tttggattgacttatttgagcttatctactggcataagcacttatgag 1418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 9210973 - 9210934
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  9210973 ctatttggattgacttatttgagcttatctactgatataa 9210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 5276639 - 5276594
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||    
T  5276639 tttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 7513708 - 7513663
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  7513708 tttgaattgacttatttgagcttatctactggcataagcacttgtg 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 19302479 - 19302520
Alignment:
Q  119 acctatttggattgacttatttgagcttacctactgacataa 160  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  19302479 acctgtttgaattgacttatttgagcttatctactgacataa 19302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 46946054 - 46946017
Alignment:
Q  126 tggattgacttatttgagcttacctactgacataaaca 163  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46946054 tggattgacttatttgagcttagctactggcataaaca 46946017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 11619079 - 11619115
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  11619079 tttggattggcttatttgagcttatctactgacataa 11619115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 12234806 - 12234858
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||| ||||||||| |||||| ||| | ||| |||||||    
T  12234806 cctatttggattgacttagttgagcttatctactggcattagcacgtgtgaga 12234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 23215004 - 23214956
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||| |||| |||||  ||||||||||| |||||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgaga 23214956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 29363657 - 29363609
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| ||||||||| |||| ||||| |||||| |||||||||||    
T  29363657 tttggattggcttatttgaacttatctactaacataagcacttgtgaga 29363609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 31341294 - 31341242
Alignment:
Q  114 taaagacctatttggattgacttatttgagcttacctactgacataaacactt 166  Q
    ||||||| | |||||||||||||||||||||||  |||||  |||||||||||    
T  31341294 taaagacatgtttggattgacttatttgagcttttctacttgcataaacactt 31341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 33266407 - 33266443
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| |||| |||||||    
T  33266407 tttggattgacttatttgagcttatctaccgacataa 33266443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 33673226 - 33673190
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673226 tttggattgactcatttgagcttatctactgacataa 33673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 33871391 - 33871347
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaacacttg 167  Q
    |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  33871391 attttgattgacttttttgagcttatctacttacataaacacttg 33871347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 40598406 - 40598454
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| |||||  ||| |||||||| ||||    
T  40598406 tttggattgacttatttgagcttatctactagcatgaacacttgcgaga 40598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 44289960 - 44290012
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  44289960 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 44290012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 1017176 - 1017129
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgaga 1017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 24193681 - 24193618
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttgg 187  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||  |||| |||||||||    
T  24193681 tttggattgacttatttgagcttatctcctggcataaacacttgtgagttgtgagactatttgg 24193618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 32420976 - 32421027
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32420976 ctatttggattgacttatttgagcttacctactagcataagcacttgtgaga 32421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 18628472 - 18628522
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18628472 tatttagattgacgtatttgagcttatctactgacataaacacttgtgaga 18628522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 18512440 - 18512484
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18512440 gattaacttatttgagcttatctactgacataaacacttgtgaga 18512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 27043751 - 27043787
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27043751 tttggattgacttatttgagcttatctactgacataa 27043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 56186803 - 56186867
Alignment:
Q  108 tgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||| || | |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||    
T  56186803 tgaaactaaacacttgtttggattaacttattcgagtttatctactaacataaacacttgtgaga 56186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 22845620 - 22845674
Alignment:
Q  117 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||  ||||||||||    
T  22845620 agacctatttggattggcttatttgagcttatctact-acataagtacttgtgaga 22845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 1075607 - 1075561
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||| |||| |||||||||||||| |||||| |||||||||||||||    
T  1075607 tttgaattggcttatttgagcttatctactggcataaacacttgtga 1075561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 19305077 - 19305027
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||| ||| ||| |||||||| || ||||||||    
T  19305077 tatttggattgacttatttgagattatctattgacataagcatttgtgaga 19305027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 28259422 - 28259376
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||    
T  28259422 tttggactgacttatttgagcttatcaactgacataagcacttgtga 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 7367975 - 7368023
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||| ||| |||| | ||||||| |||||||||    
T  7367975 tttggattgacttatttgagtttatctacaggcataaacgcttgtgaga 7368023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 8420948 - 8420908
Alignment:
Q  121 ctatttggattgactta-tttgagcttacctactgacataa 160  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  8420948 ctatttggattgacttagtttgagcttatctactgacataa 8420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 10365923 - 10365883
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacact 165  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacact 10365883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 15173224 - 15173260
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  15173224 tttggattgacttatttgaacttatctactgacataa 15173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 17822786 - 17822822
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  17822786 tttggattaacttatttgagcttatctactgacataa 17822822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 17975258 - 17975302
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  17975258 tttggattgacttatttgagcttatctaccaacacaaacacttgt 17975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 19429391 - 19429439
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| ||||||||||||||  |||||  ||||||||||||||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgaga 19429439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 28615483 - 28615435
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||| || ||| |||||  |||||||||||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgaga 28615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 32072012 - 32071964
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||| ||||||||||||| ||| ||| |||||||| |||||||||||    
T  32072012 tttggactgacttatttgagtttatctattgacataagcacttgtgaga 32071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 42403944 - 42403980
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| | ||||||||||    
T  42403944 tttggattgacttatttgagcttatcaactgacataa 42403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 44320098 - 44320050
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||  ||||||||||||||||| || |||||||| ||||||||    
T  44320098 tttggattggtttatttgagcttacctattggcataaacaattgtgaga 44320050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 47146097 - 47146045
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||| ||||  || || ||||| |||||||||||    
T  47146097 cctatttggattgacttatttgaacttatatattggcataagcacttgtgaga 47146045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 49940088 - 49940124
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||||||||||||| || ||||||    
T  49940088 tttggattgacttatttgagcttacctgctaacataa 49940124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 54277248 - 54277292
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||||    
T  54277248 gattgacttatttgaacttatctagtgacataaacacttatgaga 54277292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 55870263 - 55870311
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870263 tttggattaacttatttgagtttatctaatgacataaacatttgtgaga 55870311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 22667556 - 22667504
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22667556 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 22724195 - 22724143
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22724195 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22724143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 20210849 - 20210897
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  20210849 tttggattgatttatttgaggttatctactgacataaccacttgtgaga 20210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 21872216 - 21872264
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||||||    
T  21872216 tttggattaacttatttgatcttatctactgacataagcacttgtgaga 21872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 26990146 - 26990181
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacata 159  Q
    |||||||||||||||||||||||| |||||||||||    
T  26990146 tttggattgacttatttgagcttatctactgacata 26990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 41848634 - 41848681
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  41848634 ctatttagattgacttatttgagtttatctactaacataaacacttgt 41848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 51929890 - 51929843
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||    
T  51929890 tttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 16072956 - 16072998
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataa 160  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  16072956 gacctgtttggattgacttatttgagcttatctaatgacataa 16072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 31512532 - 31512486
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||||| ||||||||||||||||  ||| |||||||||||    
T  31512532 tttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 26911741 - 26911704
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  26911741 atttggattgacttatttgagtttatctactgacataa 26911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 33965412 - 33965457
Alignment:
Q  127 ggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| |||||||||||| |||||||| ||||||| |||||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgaga 33965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 20173811 - 20173859
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||| || ||| ||| |||| |||||||||||    
T  20173811 tttggattgacttatttgagcgtatctattgaaataagcacttgtgaga 20173859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 24158435 - 24158483
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||||| ||||||| |||||| ||||||||||||  ||||||||    
T  24158435 tatttggattggcttatttaagcttatctactgacataagtacttgtga 24158483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 25447166 - 25447202
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  25447166 tttggattgacttatttgagtttatctactgacataa 25447202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 32663787 - 32663739
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||||||| |||| |||| | ||||||||||||    
T  32663787 tttggattggcttatttgagcttatctaccgacaaatacacttgtgaga 32663739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 37138431 - 37138383
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||| ||  ||| ||||||||||||||||||||||||    
T  37138431 tttggattggcttattagaatttatctactgacataaacacttgtgaga 37138383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 44014719 - 44014767
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  44014719 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 44014767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 13867027 - 13866979
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  13867027 tttggattgacctatttgagcttatctactgccataaacacttgtgaga 13866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 22878247 - 22878199
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgaga 22878199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 43985363 - 43985314
Alignment:
Q  119 acctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  43985363 acctatttggatcgacttatttaagtttatctactgacataaacacttgt 43985314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 3458740 - 3458700
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgt 168  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  3458740 gattgacttatttgagcttacttactggcataaacacttgt 3458700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 15370244 - 15370292
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  15370244 tttggattgacttatttgagcttatctactggcataagcatttgtgaga 15370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 28803447 - 28803499
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||| |||||||    
T  28803447 cctatttggattgacttatttgagcttatctaccggcataagcacatgtgaga 28803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 40759309 - 40759261
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  40759309 tttggattgccttatttgagcttatctattgacataagcacttgtgaga 40759261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 40837358 - 40837398
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacac 164  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  40837358 tttggattggcttatttgagcttatctactgacataaacac 40837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 41170759 - 41170711
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  41170759 tttggattggcttatttgagtttatctactaacataaacacttgtgaga 41170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 18525162 - 18525209
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  18525162 tttgaattgacttatttgagcttatctacagacataaacactcgtgag 18525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 28810373 - 28810420
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  28810373 tttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 40158870 - 40158819
Alignment:
Q  121 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||| ||||||||||| || ||||||||||||  ||||||||||    
T  40158870 ctatttggattggcttatttgagcatatctactgacataagaacttgtgaga 40158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 29430896 - 29430862
Alignment:
Q  135 ttatttgagcttacctactgacataaacacttgtg 169  Q
    ||||||||||||| |||||||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtg 29430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 1830188 - 1830143
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||    
T  1830188 tttggattgacttatttgagtttatttactgacataagcacttgtg 1830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 8017583 - 8017538
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtg 169  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  8017583 tttggattgacttatttgaggttatctattgacataagcacttgtg 8017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 21616580 - 21616629
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||| || ||| | ||||||||||||| ||||||||    
T  21616580 atttggattgacttatttcagtttatccactgacataaacatttgtgaga 21616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 26372648 - 26372697
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgagaa 173  Q
    |||||||||||| ||||||||||| || ||||||||| || |||||||||    
T  26372648 tttggattgactcatttgagcttatcttctgacataagcatttgtgagaa 26372697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 41516949 - 41516982
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaa 161  Q
    |||||||||||||||||||||||||| |||||||    
T  41516949 gattgacttatttgagcttacctactcacataaa 41516982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3078529 - 3078573
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||    
T  3078529 tttggattgacttatttgagcttatctaccaacacaaacacttgt 3078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 18179098 - 18179062
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  18179098 tttggattgacttatttgagcttatctactaacataa 18179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 27317528 - 27317492
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| |||| |||||||    
T  27317528 tttggattgacttatttgagcttatctaccgacataa 27317492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 30331900 - 30331864
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  30331900 tttggattgacttatttcagcttatctactgacataa 30331864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 35329739 - 35329787
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||| |||||||| |||||  |||||||||| ||||||    
T  35329739 tttggattgacttatgtgagcttatctactaccataaacactagtgaga 35329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 40059382 - 40059418
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40059382 tttggattgacttatttgagtttatctactgacataa 40059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 40085282 - 40085318
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  40085282 tttggattgacttatttgagtttatctactgacataa 40085318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 40851747 - 40851699
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||| |||||  | |||||||||||| ||||||||    
T  40851747 tttggattgacttatttgcgcttaattgctgacataaacaattgtgaga 40851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 4560651 - 4560604
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgag 171  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  4560651 tttggattgacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 10560194 - 10560147
Alignment:
Q  126 tggattgacttatttgagcttacctactgacataaacacttgtgagaa 173  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  10560194 tggattgacttagttgagcttatctactgacataaacatttgtgagaa 10560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 34291039 - 34290974
Alignment:
Q  103 aattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||| |||||||| || ||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  34291039 aattttgaaactagaggcctatttcgattgacttgtttgagttcatctactgacataaacacttgt 34290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 1821982 - 1821934
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1821982 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1821934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 1856427 - 1856379
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1856427 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1856379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 7714391 - 7714343
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||    
T  7714391 tttggattgacttatttgagcttatataatgtcataaacacttgtgaga 7714343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 9700150 - 9700102
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 9700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 18331863 - 18331815
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 22705031 - 22705079
Alignment:
Q  122 tatttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||| |||| |||||||||||||||||| | ||||||||||||||||    
T  22705031 tatttgaattggcttatttgagcttacctattaacataaacacttgtga 22705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 38602476 - 38602440
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38602476 tttggattgacttatttgagcttatctactgacataa 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 2606198 - 2606152
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  2606198 tttggattgacttattcgagcttatctactgacataatcactagtga 2606152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 8060817 - 8060775
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacactt 166  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  8060817 tttggattgacttatttgagcatatctattgacataaacactt 8060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 43368615 - 43368669
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| || ||||||||    
T  43368615 gacctgtttggattgacttatttgatcttatctactaacataagcatttgtgaga 43368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 1561427 - 1561378
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||| |||||||| |||| ||| || |||||||||||||||||    
T  1561427 atttggattgatttatttgatcttatctaatggcataaacacttgtgaga 1561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6950468 - 6950423
Alignment:
Q  127 ggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgaga 6950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 1892149 - 1892193
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||| ||| |||| | |||||||||||||||||    
T  1892149 gattgacttatttgagtttatctaccgtcataaacacttgtgaga 1892193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 2487929 - 2487977
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||| | | |||||||||||| |||||||||||    
T  2487929 tttggattggcttatttgagttcatctactgacataagcacttgtgaga 2487977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 7008747 - 7008699
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||| ||||||||||||||| ||| |||||| ||||| |||||||||||    
T  7008747 tttgaattgacttatttgagtttatctactggcataagcacttgtgaga 7008699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 10488612 - 10488564
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||||||| | ||| |||||||||| |||||||    
T  10488612 tttggattggcttatttgagcttatcaactaacataaacacatgtgaga 10488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 14926903 - 14926951
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||| ||||  ||||| ||||| |||||||||||    
T  14926903 tttggattgacttatttgaacttatttactggcataagcacttgtgaga 14926951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 16162909 - 16162861
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| |||||||||| ||| |||||  |||||||||||||||||    
T  16162909 tttggattggcttatttgagtttatctactagcataaacacttgtgaga 16162861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 20186381 - 20186433
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20186381 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20186433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 20205448 - 20205500
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  20205448 cctatttgcattgacttatttgagcttatctagtggcatagacactggtgaga 20205500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 29168776 - 29168824
Alignment:
Q  118 gacctatttggattgacttatttgagcttacctactgacataaacactt 166  Q
    |||||||||| ||||||| |||||||||||||||||  ||||| |||||    
T  29168776 gacctatttgtattgactgatttgagcttacctactagcataagcactt 29168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 30251375 - 30251411
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30251375 tttggattggcttatttgagcttatctactgacataa 30251411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 32976522 - 32976478
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgt 168  Q
    ||||||||  |||||||||||||| |||||||||||| |||||||    
T  32976522 tttggattcccttatttgagcttatctactgacataagcacttgt 32976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 39881646 - 39881690
Alignment:
Q  128 gattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgaga 39881690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 43393689 - 43393741
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||||||||| |||||| |||||  || |||||||| |||||    
T  43393689 cctatttggattgacttatttaagcttatctacttgcaaaaacacttttgaga 43393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 43717851 - 43717891
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  43717851 cctatttggattggcttatttgagcttatctattgacataa 43717891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 13908389 - 13908343
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||    
T  13908389 tttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 31776193 - 31776239
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31776193 tttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 8420117 - 8420166
Alignment:
Q  124 tttggattgactt-atttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  8420117 tttggattgactttatttgagcttatctattgacataaacacttgtgaga 8420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 12111120 - 12111068
Alignment:
Q  120 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||||||| |||||  ||||| |||||| ||||    
T  12111120 cctatttggattgacttatttgagcttatctactagcataagcacttgcgaga 12111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 6742955 - 6742912
Alignment:
Q  129 attgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||||||||||||||||  ||||| |||||||||||    
T  6742955 attgacttatttgagcttacctactagcataatcacttgtgaga 6742912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 7351597 - 7351640
Alignment:
Q  129 attgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  7351597 attgacttatttgagtttatctactgacataagcacttgtgaga 7351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 2732160 - 2732216
Alignment:
Q  118 gacctatttggattgacttattt--gagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||  ||||||  |||||||||||| |||||||||||    
T  2732160 gacctattgggattgacttatttgagagcttgtctactgacataagcacttgtgaga 2732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 17241082 - 17241127
Alignment:
Q  125 ttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||| ||||||||||| |||  |||||||||||||||||||||    
T  17241082 ttggatttacttatttgagtttatatactgacataaacacttgtga 17241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 26559159 - 26559208
Alignment:
Q  123 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||| ||||||||||| |||||||||| ||||| || ||||||||    
T  26559159 atttggattaacttatttgagtttacctactggcataagcatttgtgaga 26559208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 738462 - 738510
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||||||||    
T  738462 tttggattaacttatttgagcttatctattgagataaacatttgtgaga 738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 3750136 - 3750100
Alignment:
Q  134 cttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  3750136 cttatctgagcttatctactgacataaacacttgtga 3750100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 4325226 - 4325274
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||||| |||| || ||| ||||| ||||||||||||||||||    
T  4325226 tttggattgactaattttagtttatctactaacataaacacttgtgaga 4325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 8010506 - 8010458
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    ||||||||||||||| |||||||| ||| || |||||||| ||||||||    
T  8010506 tttggattgacttatgtgagcttatctattggcataaacatttgtgaga 8010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 10016772 - 10016724
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 172  Q
    |||||||||  ||||||||||||| |||| | |||||||||||||||||    
T  10016772 tttggattggtttatttgagcttatctacaggcataaacacttgtgaga 10016724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 20861619 - 20861655
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  20861619 tttggattgtcttatttgagcttacctactggcataa 20861655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 21405075 - 21405111
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataa 160  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21405075 tttggattgacttatttgagcttatatactgacataa 21405111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 159894 - 159940
Alignment:
Q  124 tttggattgacttatttgagcttacctactgacataaacacttgtga 170  Q
    ||||||||| |||||||||||||| ||||| | ||||||||||||||    
T  159894 tttggattggcttatttgagcttatctactaatataaacacttgtga 159940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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