View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10570_low_1 (Length: 424)
Name: NF10570_low_1
Description: NF10570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10570_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 14 - 408
Target Start/End: Original strand, 40382537 - 40382931
Alignment:
| Q |
14 |
agagcaatggtgatgaacaagcagttccatttactaagttgtgtgactccttgctgcttcagtatatcagctccagtaacaacacaagtagaactcgtta |
113 |
Q |
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| T |
40382537 |
agagcaatggtgatgaacaagcagttccatttactaagttgtgtgactccttgctgcttcagtatatcagctccagtaacaacacaagtagaactcgtta |
40382636 |
T |
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| Q |
114 |
tgttagtccctagtgtactactcaagctcttcaacagctcaaccttcaaactccctgggacatcaccaagcggagtgttatcaaacatctgaatcccttt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382637 |
tgttagtccctagtgtactactcaagctcttcaacagctcaaccttcaaactccctgggacatcaccaagcggagtgttatcaaacatctgaatcccttt |
40382736 |
T |
|
| Q |
214 |
gacgaagcaccttggtggcttaatatcaaactcattctgaagcactccttcaaaagggtacttcaccagtgataggtaatggaaccatatccagtaaggt |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382737 |
gacgaagcaccttggtggcttaatatcaaactcattctgaagcactccttcaaaagggtacttcaccagtgataggtaatggaaccatatccagtaaggt |
40382836 |
T |
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| Q |
314 |
ggaatcctatccctactgatgaagaatccactgaagagaagaaagtaagctaaaatagcaaccacaacggtgaaaccaagcatcacatgcgaaac |
408 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382837 |
ggaatcctatccctacttatgaagaatccactgaagagaagaaagtaagctaaaatagcaaccacaacggtgaaaccaagcatcacatgcgaaac |
40382931 |
T |
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