View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10572_4 (Length: 410)
Name: NF10572_4
Description: NF10572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10572_4 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 3 - 398
Target Start/End: Complemental strand, 40382931 - 40382536
Alignment:
| Q |
3 |
gtttcgcatgtgatgcttggtttcaccgttgtggttgctattttagcttactttcttctcttcagtggattcttcatcagtagggataggattccacctt |
102 |
Q |
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| T |
40382931 |
gtttcgcatgtgatgcttggtttcaccgttgtggttgctattttagcttactttcttctcttcagtggattcttcataagtagggataggattccacctt |
40382832 |
T |
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| Q |
103 |
actggatatggttccattacctatcactggtgaagtacccttttgaaggagtgcttcagaatgagtttgatattaagccaccaaggtgcttcgtcaaagg |
202 |
Q |
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| T |
40382831 |
actggatatggttccattacctatcactggtgaagtacccttttgaaggagtgcttcagaatgagtttgatattaagccaccaaggtgcttcgtcaaagg |
40382732 |
T |
|
| Q |
203 |
gattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagctgttgaagagcttgagtagtacactagggactaacataacg |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382731 |
gattcagatgtttgataacactccgcttggtgatgtcccagggagtttgaaggttgagctgttgaagagcttgagtagtacactagggactaacataacg |
40382632 |
T |
|
| Q |
303 |
agttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaacttagtaaatggaactgcttgttcatcaccattgctctg |
398 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40382631 |
agttctacttgtgttgttactggagctgatatactgaagcagcaaggagtcacacaacttagtaaatggaactgcttgttcatcaccattgctctg |
40382536 |
T |
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