View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10572_low_1 (Length: 273)
Name: NF10572_low_1
Description: NF10572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10572_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 27 - 260
Target Start/End: Original strand, 22864993 - 22865228
Alignment:
| Q |
27 |
ctgcttcgtaggattcttccacatatacgtacaaggcacatgtata--tatattatacatttgtgtatatatcatgcatgtacctgcaggtttgaataga |
124 |
Q |
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| T |
22864993 |
ctgcatcgtaggattcttccacatatacgtacaaggcacatgtatatatatattatacatttgtgtatatatcatgcatgtacctgcaggtttgaataga |
22865092 |
T |
|
| Q |
125 |
aactaacaaagtctcaaccaattaacttagcttgatggattatatataacattatcaaacccactaaatcagtggagtaattaattcgttcagaatttaa |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22865093 |
aactaacaaagtctcaaccaattaacttagcttgatggattatatataacattatcaaacccactaaatcagtggagtaattaattcgttcagaatttaa |
22865192 |
T |
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| Q |
225 |
tagtcaatttttggactcattctcctccttttgttc |
260 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
22865193 |
tagtcaatttttggactcattctcctccttttgttc |
22865228 |
T |
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