View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10573_high_3 (Length: 235)

Name: NF10573_high_3
Description: NF10573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10573_high_3
NF10573_high_3
[»] chr7 (29 HSPs)
chr7 (13-230)||(8537633-8537850)
chr7 (13-210)||(8609514-8609711)
chr7 (18-209)||(6789114-6789305)
chr7 (31-210)||(17267554-17267733)
chr7 (18-146)||(8575928-8576056)
chr7 (18-210)||(8590240-8590432)
chr7 (31-230)||(27831229-27831428)
chr7 (70-210)||(7878107-7878247)
chr7 (18-210)||(10494748-10494940)
chr7 (31-210)||(17259856-17260035)
chr7 (17-117)||(13333835-13333935)
chr7 (18-120)||(8581302-8581404)
chr7 (41-194)||(29582231-29582384)
chr7 (18-210)||(8654052-8654244)
chr7 (18-120)||(8545235-8545337)
chr7 (19-120)||(3146867-3146968)
chr7 (20-210)||(8667023-8667213)
chr7 (22-120)||(29578136-29578234)
chr7 (35-120)||(27846570-27846655)
chr7 (70-209)||(8102321-8102460)
chr7 (18-117)||(8658965-8659064)
chr7 (64-210)||(8636717-8636863)
chr7 (18-98)||(8558985-8559065)
chr7 (18-210)||(8569913-8570105)
chr7 (164-219)||(8601722-8601777)
chr7 (70-120)||(39985300-39985350)
chr7 (166-210)||(8576076-8576120)
chr7 (166-210)||(8581450-8581494)
chr7 (18-118)||(8586172-8586272)
[»] chr8 (2 HSPs)
chr8 (13-230)||(12528101-12528318)
chr8 (19-114)||(43744419-43744514)
[»] chr2 (7 HSPs)
chr2 (18-122)||(43625014-43625118)
chr2 (18-210)||(16657891-16658083)
chr2 (18-120)||(16662456-16662558)
chr2 (29-120)||(14703021-14703112)
chr2 (62-230)||(12245760-12245928)
chr2 (13-120)||(7541823-7541930)
chr2 (62-230)||(11999054-11999221)
[»] chr1 (3 HSPs)
chr1 (18-219)||(4678922-4679123)
chr1 (18-230)||(34467142-34467354)
chr1 (31-120)||(15594649-15594738)
[»] chr5 (1 HSPs)
chr5 (13-120)||(28219515-28219622)
[»] chr4 (5 HSPs)
chr4 (62-210)||(35132102-35132250)
chr4 (20-219)||(30774856-30775055)
chr4 (18-117)||(9336358-9336457)
chr4 (59-138)||(23597031-23597110)
chr4 (80-114)||(54396087-54396121)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 8537633 - 8537850
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8537633 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 8537732  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8537733 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 8537832  T
Q  213 tactactgatgtccatct 230  Q
    |||||||  |||||||||    
T  8537833 tactactactgtccatct 8537850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 8609514 - 8609711
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||||||||||||||||| ||||| |  || |||||| | | |||||||||||||||||||||||||||||||||||| || |||||||||    
T  8609514 aggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaaccgcctcatcaggg 8609613  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||||||  || | | |||||| ||  ||||||||| |||||| ||   || |||||| |||||||||||||| || ||||| || |||||||||||    
T  8609614 ttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaacaacatcatc 8609711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 6789114 - 6789305
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| ||||||||||||| |||||| |||||  |||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  6789114 taacatcttgcagcaccaagtttggaacactcttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgat 6789213  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcat 209  Q
    |||  |  | | |||||| ||| ||||||  | |||||  ||    |||||||||||||| |||||||| |||||||| || ||||||||||    
T  6789214 gctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcat 6789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 17267554 - 17267733
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| |||| | || ||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||  | |      
T  17267554 caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataat 17267653  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||||||| |||| ||||| ||||  ||   ||||||||| |||||||||||||| |||||||| || |||||||||||    
T  17267654 tccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatc 17267733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 8575928 - 8576056
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| | ||||||||| |||||| ||||| ||||| | |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  8575928 taacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgat 8576027  T
Q  118 gcttttaaaaatatccttccccctgaaaa 146  Q
    ||| ||| | |  ||||||||| ||||||    
T  8576028 gctcttacataattccttccccttgaaaa 8576056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8590240 - 8590432
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| | |||||||| || |||||| ||||||| ||  | |  | ||||||||| || ||||| ||||||||||||||||| ||||| || |||||    
T  8590240 taacatcttgtagcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacagcctcatctggattgat 8590339  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| ||  ||| |||||||||| | ||||||| |||||  ||   |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  8590340 gctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatc 8590432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 27831428 - 27831229
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| || ||||| |  | ||||||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||| ||  | | |    
T  27831428 caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa 27831329  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
    ||||| ||| |||||||||    ||  ||   |||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||  |||||||||    
T  27831328 tcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatct 27831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 7878247 - 7878107
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcact 169  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||||||||||  |  |||||||||||||| | |||||||  ||||  ||   |||||||    
T  7878247 agcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcact 7878148  T
Q  170 ttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| |||||||||| || |||||||| ||||||||||||||    
T  7878147 ttgagaatcctagatgatccaccaacaagtacaacatcatc 7878107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 10494940 - 10494748
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| |||||||||||||| ||| |||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  10494940 taacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat 10494841  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |   | || |  ||||||||| ||||||| | | |||  |||  ||||||||||||||||||||| |||||||| || || |||| ||||||    
T  10494840 acgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc 10494748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 17259856 - 17260035
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| |||| | || ||| || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||  | |      
T  17259856 caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat 17259955  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||| ||| |||| || |  ||||  ||   ||||||||| |||||||||||||| |||||||| || |||||||||||    
T  17259956 tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatc 17260035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 13333935 - 13333835
Alignment:
Q  17 ataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttga 116  Q
    ||||||||||| |||||||||||||| |||||||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  13333935 ataacatctcgtagcaccaagttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttga 13333836  T
Q  117 t 117  Q
    |    
T  13333835 t 13333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8581302 - 8581404
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||  | |||||| |||||| ||||||||||| | || | |||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  8581302 taacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaacagcctcatcagggttgat 8581401  T
Q  118 gct 120  Q
    |||    
T  8581402 gct 8581404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 29582384 - 29582231
Alignment:
Q  41 ggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccc 140  Q
    |||||| ||| ||||||| |  ||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||  |  | | ||||||||||     
T  29582384 ggaacattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttcccct 29582285  T
Q  141 tgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaa 194  Q
    ||||||| | |||||  ||    |||||||||||||| ||||||||||||||||    
T  29582284 tgaaaaattcttgcaatagctgatgcactttgggaattctagaagagccaccaa 29582231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8654052 - 8654244
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||| || ||||||||||| || ||| |||||| | || | ||||| | ||||||||| |||||||| ||||| |||| ||| ||||| ||||||||    
T  8654052 taacatcacgtagcaccaagttggggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat 8654151  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
      |  |||| | | |||||||| ||||||| | | |||  |||  ||||||||||||||||||||| |||||||| || ||||||||||||||    
T  8654152 attcataaacaaagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatc 8654244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8545235 - 8545337
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| ||||||| ||| || ||| ||||| || || | |||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||    
T  8545235 taacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaacagcctcatcagggttaat 8545334  T
Q  118 gct 120  Q
    |||    
T  8545335 gct 8545337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 3146867 - 3146968
Alignment:
Q  19 aacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatg 118  Q
    ||||||| ||| ||||||||| |||||| | |||| | || | |||||||||||||| || ||||| |||||||||||||| || |||||||||||||||    
T  3146867 aacatcttgcaccaccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatg 3146966  T
Q  119 ct 120  Q
    ||    
T  3146967 ct 3146968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 8667023 - 8667213
Alignment:
Q  20 acatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgc 119  Q
    |||||||| ||||||||||| || ||| |||||  |||| | ||||| | ||||||||| ||||| ||||||||||||||||| || || |||||||| |    
T  8667023 acatctcgtagcaccaagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgatac 8667122  T
Q  120 ttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
       | || |  ||||||||| ||||| | | | |||   |   ||||||||||||||||||||| |||||||| || ||||||||||||||    
T  8667123 ccatgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcatc 8667213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 29578234 - 29578136
Alignment:
Q  22 atctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||  ||||| || |||||| ||||||||||  |  |||||||||||||||| ||||| ||||||||||||||||| || |||||||| |||||    
T  29578234 atctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgct 29578136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 27846655 - 27846570
Alignment:
Q  35 aagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||| |||||| |||||||| |  | ||||||||||||||||| ||||| || ||| |||||||||| |||||||||||||||||    
T  27846655 aagtttggaacattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgct 27846570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 8102321 - 8102460
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcact 169  Q
    |||||| || ||||| ||||||||||||||||| || || ||||||||||||||  | |  ||||| ||  |||| |||| ||||| |||   ||| |||    
T  8102321 agcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaact 8102420  T
Q  170 ttgggaatcctagaagagccaccaactagtacaacatcat 209  Q
    |||||||||||||  || |||||||| || ||||||||||    
T  8102421 ttgggaatcctagttgaaccaccaacaagaacaacatcat 8102460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 8658965 - 8659064
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| ||||||||||||| || ||| |||||| ||||  ||| || | |||||| || | ||| ||||||||||||||||| ||||| ||||||||    
T  8658965 taacatcttgcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcctcatctgggttgat 8659064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 8636863 - 8636717
Alignment:
Q  64 caacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactc 163  Q
    |||||| ||||||||||| || || |||||||||||||| ||||||| ||||||||| ||| | |  |||||| || | |||| ||  || |  ||   |    
T  8636863 caacaatgcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgc 8636764  T
Q  164 tgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||| || ||||||||||| ||||||||||| || |||||||||||    
T  8636763 tgcacctttggaatcctagaggagccaccaacaaggacaacatcatc 8636717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 8558985 - 8559065
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaa 98  Q
    ||||||||| |||||||| ||| |||||| ||||| || || | || | |||| ||||||||||||| |||||||||||||    
T  8558985 taacatctctcagcaccatgtttggaacattcttagtgtcttcactaagcaaaacagcctggacagctgcaccataagcaa 8559065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8569913 - 8570105
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||  |||||||| |||||| |||||| || | | ||   |||| ||||||| | ||| ||||| ||||||||||| ||||||||||| ||    
T  8569913 taacatctcgcaaaaccaagtttggaacactcttaacgctttcactatgcaaaacagcctgaatagctgcaccgtaagcaacagcctcatcagggttaat 8570012  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| ||  | |  |||||||||  |||||| | ||| |  ||   |  |||||| |||||||||||||| |||||||| || |||||||||||    
T  8570013 gctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8570105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 8601722 - 8601777
Alignment:
Q  164 tgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactact 219  Q
    ||||||||||||||||||||||| || ||||| || ||| ||||||||| ||||||    
T  8601722 tgcactttgggaatcctagaagaaccgccaacaaggacagcatcatccacactact 8601777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 39985300 - 39985350
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||| |||||||||||||| |||||||| |||||||| || |||||    
T  39985300 agcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgct 39985350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8576076 - 8576120
Alignment:
Q  166 cactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    |||||| |||||||||||||| |||||||| || |||||||||||    
T  8576076 cactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8576120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8581450 - 8581494
Alignment:
Q  166 cactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    |||||| |||||||||||||| |||||||| || |||||||||||    
T  8581450 cactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8581494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 8586272 - 8586172
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||||||||| |||||  |||||| | ||   | || ||||| |||||| || ||||| |||  ||||||||| |||||||| |||||    
T  8586272 taacatctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacagcctcatcaggattgat 8586173  T
Q  118 g 118  Q
    |    
T  8586172 g 8586172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 12528101 - 12528318
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    ||||||||||||| |||||  ||  |||||||||||||| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  12528101 aggtataacatcttgcagcgtcactttcggaacagtcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcaggg 12528200  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 212  Q
    |||||||| ||  | |  ||||| ||| ||||||| |  ||||  ||   || |||||||||||||||||| ||||||||||| ||||||| |||||| |    
T  12528201 ttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatcta 12528300  T
Q  213 tactactgatgtccatct 230  Q
     ||||||  |||||||||    
T  12528301 cactactcttgtccatct 12528318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 43744419 - 43744514
Alignment:
Q  19 aacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggtt 114  Q
    ||||||| ||||||||| ||| |||||  | |||| |||| | ||||||||||||||||| ||||| ||||||  |||||| || |||||||||||    
T  43744419 aacatcttgcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggtt 43744514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 43625014 - 43625118
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||||||||| || |||||| |||||||||||   ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||    
T  43625014 taacatctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttat 43625113  T
Q  118 gcttt 122  Q
    |||||    
T  43625114 gcttt 43625118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 16658083 - 16657891
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||| || |||||| |  || ||| |||||| |||| | ||||| | |||||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  16658083 taacatctctcaacaccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgat 16657984  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |||||  | | |||||| ||| ||||||||| |||||  |||  ||||||||||||||||||||| |||||||| || || ||||| |||||    
T  16657983 acttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtcatc 16657891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16662558 - 16662456
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||| ||||||||||||||||| ||||||  |||||||||| | ||||||| |||||| || ||||| || |||||||||||||| ||||||||||||||    
T  16662558 taacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgat 16662459  T
Q  118 gct 120  Q
    |||    
T  16662458 gct 16662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 14703021 - 14703112
Alignment:
Q  29 agcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    |||||||| ||||||||| |||| | | || | ||||||||||||||||| ||||| || |||||||| ||||||||||||||||| |||||    
T  14703021 agcaccaacttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgct 14703112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 12245928 - 12245760
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    |||||||||||||| || ||||| || |||||||||||||| || |||||||| ||||| ||  | |  ||||||||  |||||||||  || |  ||      
T  12245928 ctcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagct 12245829  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
      || |||||||||||||||||||| |||||||| ||||||| |||||| ||| ||||  |||||||||    
T  12245828 gttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatct 12245760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 7541823 - 7541930
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||  |||||||||| || ||| |  |||||| |||||| |||||||| |||||||| ||||| || |||||||||||||| ||||||||     
T  7541823 aggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcagga 7541922  T
Q  113 ttgatgct 120  Q
    || |||||    
T  7541923 ttaatgct 7541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 11999054 - 11999221
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    |||||||||||||| || ||||| || |||||||| ||||| ||||||||||| ||||| ||  | |  ||||||||  |||||||||  || |  ||      
T  11999054 ctcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagct 11999153  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
      || ||||||||| |||||||||| |||||||| |||||||||||||| ||| ||||  |||||||||    
T  11999154 gttggactttggga-tcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatct 11999221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 4679123 - 4678922
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||| || ||||| ||| ||||||  ||| ||||||| | |||||| |||| ||| ||||||||||||||||| ||||| ||||||||    
T  4679123 taacatctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgat 4679024  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatacta 217  Q
     || ||  | | |||||||| | | ||||||| |||||  |||  |||||||||||||||||| || || ||||| || || ||||||||||| ||| ||    
T  4679023 actcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatta 4678924  T
Q  218 ct 219  Q
    ||    
T  4678923 ct 4678922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 34467354 - 34467142
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||||||||| |||||| | |||| ||||   |||||||||||||| || ||||| ||  ||||||| ||||| ||||||||||||||    
T  34467354 taacatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgat 34467255  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatacta 217  Q
    ||| ||  | | |||||| ||  |||||||||   |||  ||   ||||||||||||||||||||||||||| || || || ||| |||||| || ||||    
T  34467254 gctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacacta 34467155  T
Q  218 ctgatgtccatct 230  Q
    ||  |||||||||    
T  34467154 ctcgtgtccatct 34467142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 15594649 - 15594738
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||| |||||| | ||||  ||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  15594649 caccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgct 15594738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 28219515 - 28219622
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||| |||||||||| ||||||||  | |||| |||| | ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  28219515 aggtgtaacatcttgcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcaggg 28219614  T
Q  113 ttgatgct 120  Q
    || |||||    
T  28219615 ttaatgct 28219622  T

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Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 35132102 - 35132250
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    ||||||||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||  | |  ||||||||  |||||||||||||||  ||      
T  35132102 ctcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagct 35132201  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |||||||||||||||||||||||| || ||||| || |||||||||||    
T  35132202 gctgcactttgggaatcctagaagaccctccaacaagaacaacatcatc 35132250  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 30774856 - 30775055
Alignment:
Q  20 acatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgc 119  Q
    ||||||||||||||||| || ||  || ||||||||||| | ||||| | ||||||||||||||| || || | |||||| || |||||||| |||||||    
T  30774856 acatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgc 30774955  T
Q  120 ttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactact 219  Q
    | ||  | | |||||||||  |||| || ||  |||  ||   |||||||||||||||||||||||| ||||| || || |||| |||||| | ||||||    
T  30774956 tcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactact 30775055  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 9336457 - 9336358
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| ||||||||||| ||  || |||||| |||| | ||||| | |||||| || ||||| ||||||||||||||||| ||||| ||||||||    
T  9336457 taacatctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgat 9336358  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 23597110 - 23597031
Alignment:
Q  59 ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccc 138  Q
    |||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| |||  ||||||||    
T  23597110 ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc 23597031  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 54396087 - 54396121
Alignment:
Q  80 acagcagcaccataagcaacagcttcatcagggtt 114  Q
    |||||||||||||||||||||||||||||||||||    
T  54396087 acagcagcaccataagcaacagcttcatcagggtt 54396121  T

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