View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10573_low_7 (Length: 235)

Name: NF10573_low_7
Description: NF10573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10573_low_7
NF10573_low_7
[»] chr7 (29 HSPs)
chr7 (13-230)||(8537633-8537850)
chr7 (13-210)||(8609514-8609711)
chr7 (18-209)||(6789114-6789305)
chr7 (31-210)||(17267554-17267733)
chr7 (18-146)||(8575928-8576056)
chr7 (18-210)||(8590240-8590432)
chr7 (31-230)||(27831229-27831428)
chr7 (70-210)||(7878107-7878247)
chr7 (18-210)||(10494748-10494940)
chr7 (31-210)||(17259856-17260035)
chr7 (17-117)||(13333835-13333935)
chr7 (18-120)||(8581302-8581404)
chr7 (41-194)||(29582231-29582384)
chr7 (18-210)||(8654052-8654244)
chr7 (18-120)||(8545235-8545337)
chr7 (19-120)||(3146867-3146968)
chr7 (20-210)||(8667023-8667213)
chr7 (22-120)||(29578136-29578234)
chr7 (35-120)||(27846570-27846655)
chr7 (70-209)||(8102321-8102460)
chr7 (18-117)||(8658965-8659064)
chr7 (64-210)||(8636717-8636863)
chr7 (18-98)||(8558985-8559065)
chr7 (18-210)||(8569913-8570105)
chr7 (164-219)||(8601722-8601777)
chr7 (70-120)||(39985300-39985350)
chr7 (166-210)||(8576076-8576120)
chr7 (166-210)||(8581450-8581494)
chr7 (18-118)||(8586172-8586272)
[»] chr8 (2 HSPs)
chr8 (13-230)||(12528101-12528318)
chr8 (19-114)||(43744419-43744514)
[»] chr2 (7 HSPs)
chr2 (18-122)||(43625014-43625118)
chr2 (18-210)||(16657891-16658083)
chr2 (18-120)||(16662456-16662558)
chr2 (29-120)||(14703021-14703112)
chr2 (62-230)||(12245760-12245928)
chr2 (13-120)||(7541823-7541930)
chr2 (62-230)||(11999054-11999221)
[»] chr1 (3 HSPs)
chr1 (18-219)||(4678922-4679123)
chr1 (18-230)||(34467142-34467354)
chr1 (31-120)||(15594649-15594738)
[»] chr5 (1 HSPs)
chr5 (13-120)||(28219515-28219622)
[»] chr4 (5 HSPs)
chr4 (62-210)||(35132102-35132250)
chr4 (20-219)||(30774856-30775055)
chr4 (18-117)||(9336358-9336457)
chr4 (59-138)||(23597031-23597110)
chr4 (80-114)||(54396087-54396121)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 8537633 - 8537850
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8537633 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 8537732  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8537733 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 8537832  T
Q  213 tactactgatgtccatct 230  Q
    |||||||  |||||||||    
T  8537833 tactactactgtccatct 8537850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 8609514 - 8609711
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||||||||||||||||| ||||| |  || |||||| | | |||||||||||||||||||||||||||||||||||| || |||||||||    
T  8609514 aggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaaccgcctcatcaggg 8609613  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||||||  || | | |||||| ||  ||||||||| |||||| ||   || |||||| |||||||||||||| || ||||| || |||||||||||    
T  8609614 ttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaacaacatcatc 8609711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 6789114 - 6789305
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| ||||||||||||| |||||| |||||  |||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  6789114 taacatcttgcagcaccaagtttggaacactcttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgat 6789213  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcat 209  Q
    |||  |  | | |||||| ||| ||||||  | |||||  ||    |||||||||||||| |||||||| |||||||| || ||||||||||    
T  6789214 gctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcat 6789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 17267554 - 17267733
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| |||| | || ||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||  | |      
T  17267554 caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataat 17267653  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||||||| |||| ||||| ||||  ||   ||||||||| |||||||||||||| |||||||| || |||||||||||    
T  17267654 tccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatc 17267733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 8575928 - 8576056
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| | ||||||||| |||||| ||||| ||||| | |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  8575928 taacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgat 8576027  T
Q  118 gcttttaaaaatatccttccccctgaaaa 146  Q
    ||| ||| | |  ||||||||| ||||||    
T  8576028 gctcttacataattccttccccttgaaaa 8576056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8590240 - 8590432
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| | |||||||| || |||||| ||||||| ||  | |  | ||||||||| || ||||| ||||||||||||||||| ||||| || |||||    
T  8590240 taacatcttgtagcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacagcctcatctggattgat 8590339  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| ||  ||| |||||||||| | ||||||| |||||  ||   |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  8590340 gctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatc 8590432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 27831428 - 27831229
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| || ||||| |  | ||||||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||| ||  | | |    
T  27831428 caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa 27831329  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
    ||||| ||| |||||||||    ||  ||   |||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||  |||||||||    
T  27831328 tcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatct 27831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 7878247 - 7878107
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcact 169  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||||||||||  |  |||||||||||||| | |||||||  ||||  ||   |||||||    
T  7878247 agcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcact 7878148  T
Q  170 ttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| |||||||||| || |||||||| ||||||||||||||    
T  7878147 ttgagaatcctagatgatccaccaacaagtacaacatcatc 7878107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 10494940 - 10494748
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| |||||||||||||| ||| |||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  10494940 taacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat 10494841  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |   | || |  ||||||||| ||||||| | | |||  |||  ||||||||||||||||||||| |||||||| || || |||| ||||||    
T  10494840 acgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc 10494748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 17259856 - 17260035
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaata 130  Q
    ||||||||| |||||| |||| | || ||| || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||  | |      
T  17259856 caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat 17259955  T
Q  131 tccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||| ||| |||| || |  ||||  ||   ||||||||| |||||||||||||| |||||||| || |||||||||||    
T  17259956 tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatc 17260035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 13333935 - 13333835
Alignment:
Q  17 ataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttga 116  Q
    ||||||||||| |||||||||||||| |||||||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  13333935 ataacatctcgtagcaccaagttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttga 13333836  T
Q  117 t 117  Q
    |    
T  13333835 t 13333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8581302 - 8581404
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||  | |||||| |||||| ||||||||||| | || | |||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  8581302 taacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaacagcctcatcagggttgat 8581401  T
Q  118 gct 120  Q
    |||    
T  8581402 gct 8581404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 29582384 - 29582231
Alignment:
Q  41 ggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccc 140  Q
    |||||| ||| ||||||| |  ||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||  |  | | ||||||||||     
T  29582384 ggaacattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttcccct 29582285  T
Q  141 tgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaa 194  Q
    ||||||| | |||||  ||    |||||||||||||| ||||||||||||||||    
T  29582284 tgaaaaattcttgcaatagctgatgcactttgggaattctagaagagccaccaa 29582231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8654052 - 8654244
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||| || ||||||||||| || ||| |||||| | || | ||||| | ||||||||| |||||||| ||||| |||| ||| ||||| ||||||||    
T  8654052 taacatcacgtagcaccaagttggggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat 8654151  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
      |  |||| | | |||||||| ||||||| | | |||  |||  ||||||||||||||||||||| |||||||| || ||||||||||||||    
T  8654152 attcataaacaaagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatc 8654244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8545235 - 8545337
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| ||||||| ||| || ||| ||||| || || | |||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||    
T  8545235 taacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaacagcctcatcagggttaat 8545334  T
Q  118 gct 120  Q
    |||    
T  8545335 gct 8545337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 3146867 - 3146968
Alignment:
Q  19 aacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatg 118  Q
    ||||||| ||| ||||||||| |||||| | |||| | || | |||||||||||||| || ||||| |||||||||||||| || |||||||||||||||    
T  3146867 aacatcttgcaccaccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatg 3146966  T
Q  119 ct 120  Q
    ||    
T  3146967 ct 3146968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 8667023 - 8667213
Alignment:
Q  20 acatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgc 119  Q
    |||||||| ||||||||||| || ||| |||||  |||| | ||||| | ||||||||| ||||| ||||||||||||||||| || || |||||||| |    
T  8667023 acatctcgtagcaccaagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgatac 8667122  T
Q  120 ttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
       | || |  ||||||||| ||||| | | | |||   |   ||||||||||||||||||||| |||||||| || ||||||||||||||    
T  8667123 ccatgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcatc 8667213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 29578234 - 29578136
Alignment:
Q  22 atctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||  ||||| || |||||| ||||||||||  |  |||||||||||||||| ||||| ||||||||||||||||| || |||||||| |||||    
T  29578234 atctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgct 29578136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 27846655 - 27846570
Alignment:
Q  35 aagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||| |||||| |||||||| |  | ||||||||||||||||| ||||| || ||| |||||||||| |||||||||||||||||    
T  27846655 aagtttggaacattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgct 27846570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 8102321 - 8102460
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcact 169  Q
    |||||| || ||||| ||||||||||||||||| || || ||||||||||||||  | |  ||||| ||  |||| |||| ||||| |||   ||| |||    
T  8102321 agcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaact 8102420  T
Q  170 ttgggaatcctagaagagccaccaactagtacaacatcat 209  Q
    |||||||||||||  || |||||||| || ||||||||||    
T  8102421 ttgggaatcctagttgaaccaccaacaagaacaacatcat 8102460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 8658965 - 8659064
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||| ||||||||||||| || ||| |||||| ||||  ||| || | |||||| || | ||| ||||||||||||||||| ||||| ||||||||    
T  8658965 taacatcttgcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcctcatctgggttgat 8659064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 8636863 - 8636717
Alignment:
Q  64 caacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactc 163  Q
    |||||| ||||||||||| || || |||||||||||||| ||||||| ||||||||| ||| | |  |||||| || | |||| ||  || |  ||   |    
T  8636863 caacaatgcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgc 8636764  T
Q  164 tgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||||| || ||||||||||| ||||||||||| || |||||||||||    
T  8636763 tgcacctttggaatcctagaggagccaccaacaaggacaacatcatc 8636717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 8558985 - 8559065
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaa 98  Q
    ||||||||| |||||||| ||| |||||| ||||| || || | || | |||| ||||||||||||| |||||||||||||    
T  8558985 taacatctctcagcaccatgtttggaacattcttagtgtcttcactaagcaaaacagcctggacagctgcaccataagcaa 8559065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 8569913 - 8570105
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||  |||||||| |||||| |||||| || | | ||   |||| ||||||| | ||| ||||| ||||||||||| ||||||||||| ||    
T  8569913 taacatctcgcaaaaccaagtttggaacactcttaacgctttcactatgcaaaacagcctgaatagctgcaccgtaagcaacagcctcatcagggttaat 8570012  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    ||| ||  | |  |||||||||  |||||| | ||| |  ||   |  |||||| |||||||||||||| |||||||| || |||||||||||    
T  8570013 gctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8570105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 8601722 - 8601777
Alignment:
Q  164 tgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactact 219  Q
    ||||||||||||||||||||||| || ||||| || ||| ||||||||| ||||||    
T  8601722 tgcactttgggaatcctagaagaaccgccaacaaggacagcatcatccacactact 8601777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 39985300 - 39985350
Alignment:
Q  70 agcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||| |||||||||||||| |||||||| |||||||| || |||||    
T  39985300 agcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgct 39985350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8576076 - 8576120
Alignment:
Q  166 cactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    |||||| |||||||||||||| |||||||| || |||||||||||    
T  8576076 cactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8576120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8581450 - 8581494
Alignment:
Q  166 cactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
    |||||| |||||||||||||| |||||||| || |||||||||||    
T  8581450 cactttaggaatcctagaagaaccaccaacaaggacaacatcatc 8581494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 8586272 - 8586172
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||||||||| |||||  |||||| | ||   | || ||||| |||||| || ||||| |||  ||||||||| |||||||| |||||    
T  8586272 taacatctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacagcctcatcaggattgat 8586173  T
Q  118 g 118  Q
    |    
T  8586172 g 8586172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 12528101 - 12528318
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    ||||||||||||| |||||  ||  |||||||||||||| |||||| | ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  12528101 aggtataacatcttgcagcgtcactttcggaacagtcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcaggg 12528200  T
Q  113 ttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatcca 212  Q
    |||||||| ||  | |  ||||| ||| ||||||| |  ||||  ||   || |||||||||||||||||| ||||||||||| ||||||| |||||| |    
T  12528201 ttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatcta 12528300  T
Q  213 tactactgatgtccatct 230  Q
     ||||||  |||||||||    
T  12528301 cactactcttgtccatct 12528318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 43744419 - 43744514
Alignment:
Q  19 aacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggtt 114  Q
    ||||||| ||||||||| ||| |||||  | |||| |||| | ||||||||||||||||| ||||| ||||||  |||||| || |||||||||||    
T  43744419 aacatcttgcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggtt 43744514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 43625014 - 43625118
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||||||||||||| || |||||| |||||||||||   ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||    
T  43625014 taacatctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttat 43625113  T
Q  118 gcttt 122  Q
    |||||    
T  43625114 gcttt 43625118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 16658083 - 16657891
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    ||||||||| || |||||| |  || ||| |||||| |||| | ||||| | |||||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  16658083 taacatctctcaacaccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgat 16657984  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |||||  | | |||||| ||| ||||||||| |||||  |||  ||||||||||||||||||||| |||||||| || || ||||| |||||    
T  16657983 acttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtcatc 16657891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16662558 - 16662456
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||| ||||||||||||||||| ||||||  |||||||||| | ||||||| |||||| || ||||| || |||||||||||||| ||||||||||||||    
T  16662558 taacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgat 16662459  T
Q  118 gct 120  Q
    |||    
T  16662458 gct 16662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 14703021 - 14703112
Alignment:
Q  29 agcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    |||||||| ||||||||| |||| | | || | ||||||||||||||||| ||||| || |||||||| ||||||||||||||||| |||||    
T  14703021 agcaccaacttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgct 14703112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 12245928 - 12245760
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    |||||||||||||| || ||||| || |||||||||||||| || |||||||| ||||| ||  | |  ||||||||  |||||||||  || |  ||      
T  12245928 ctcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagct 12245829  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
      || |||||||||||||||||||| |||||||| ||||||| |||||| ||| ||||  |||||||||    
T  12245828 gttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatct 12245760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 7541823 - 7541930
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||  |||||||||| || ||| |  |||||| |||||| |||||||| |||||||| ||||| || |||||||||||||| ||||||||     
T  7541823 aggtgtaacatcctgcagcaccaactttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcagga 7541922  T
Q  113 ttgatgct 120  Q
    || |||||    
T  7541923 ttaatgct 7541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 11999054 - 11999221
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    |||||||||||||| || ||||| || |||||||| ||||| ||||||||||| ||||| ||  | |  ||||||||  |||||||||  || |  ||      
T  11999054 ctcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagct 11999153  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactgatgtccatct 230  Q
      || ||||||||| |||||||||| |||||||| |||||||||||||| ||| ||||  |||||||||    
T  11999154 gttggactttggga-tcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatct 11999221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 4679123 - 4678922
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||| || ||||| ||| ||||||  ||| ||||||| | |||||| |||| ||| ||||||||||||||||| ||||| ||||||||    
T  4679123 taacatctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgat 4679024  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatacta 217  Q
     || ||  | | |||||||| | | ||||||| |||||  |||  |||||||||||||||||| || || ||||| || || ||||||||||| ||| ||    
T  4679023 actcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatta 4678924  T
Q  218 ct 219  Q
    ||    
T  4678923 ct 4678922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 34467354 - 34467142
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||||||||||||||| |||||| | |||| ||||   |||||||||||||| || ||||| ||  ||||||| ||||| ||||||||||||||    
T  34467354 taacatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgat 34467255  T
Q  118 gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatacta 217  Q
    ||| ||  | | |||||| ||  |||||||||   |||  ||   ||||||||||||||||||||||||||| || || || ||| |||||| || ||||    
T  34467254 gctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacacta 34467155  T
Q  218 ctgatgtccatct 230  Q
    ||  |||||||||    
T  34467154 ctcgtgtccatct 34467142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 15594649 - 15594738
Alignment:
Q  31 caccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct 120  Q
    ||||||||| |||||| | ||||  ||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  15594649 caccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgct 15594738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 28219515 - 28219622
Alignment:
Q  13 aggtataacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcaggg 112  Q
    |||| |||||||| |||||||||| ||||||||  | |||| |||| | ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  28219515 aggtgtaacatcttgcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcaggg 28219614  T
Q  113 ttgatgct 120  Q
    || |||||    
T  28219615 ttaatgct 28219622  T

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Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 35132102 - 35132250
Alignment:
Q  62 ctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcagac 161  Q
    ||||||||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||  | |  ||||||||  |||||||||||||||  ||      
T  35132102 ctcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagct 35132201  T
Q  162 tctgcactttgggaatcctagaagagccaccaactagtacaacatcatc 210  Q
     |||||||||||||||||||||||| || ||||| || |||||||||||    
T  35132202 gctgcactttgggaatcctagaagaccctccaacaagaacaacatcatc 35132250  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 30774856 - 30775055
Alignment:
Q  20 acatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgc 119  Q
    ||||||||||||||||| || ||  || ||||||||||| | ||||| | ||||||||||||||| || || | |||||| || |||||||| |||||||    
T  30774856 acatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgc 30774955  T
Q  120 ttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactact 219  Q
    | ||  | | |||||||||  |||| || ||  |||  ||   |||||||||||||||||||||||| ||||| || || |||| |||||| | ||||||    
T  30774956 tcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactact 30775055  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 9336457 - 9336358
Alignment:
Q  18 taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat 117  Q
    |||||||||| ||||||||||| ||  || |||||| |||| | ||||| | |||||| || ||||| ||||||||||||||||| ||||| ||||||||    
T  9336457 taacatctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgat 9336358  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 23597110 - 23597031
Alignment:
Q  59 ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccc 138  Q
    |||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| |||  ||||||||    
T  23597110 ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc 23597031  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 54396087 - 54396121
Alignment:
Q  80 acagcagcaccataagcaacagcttcatcagggtt 114  Q
    |||||||||||||||||||||||||||||||||||    
T  54396087 acagcagcaccataagcaacagcttcatcagggtt 54396121  T

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