View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10576_low_2 (Length: 461)
Name: NF10576_low_2
Description: NF10576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10576_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 9 - 443
Target Start/End: Complemental strand, 32572871 - 32572437
Alignment:
| Q |
9 |
agcaaaggtctatatatataaattataatgaagattaattactcaatcaaaaccaacacaagatagctcagttagcataattacaggctagaaaacctca |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32572871 |
agcaaaggtctatatatataaattataatgaagattaattactcaatcaaaaccaacacaagatagctcagttagcataattacaggctagaaaacatca |
32572772 |
T |
|
| Q |
109 |
aataatgacttattcagtaactgtacacaaagcaatcttcattgttttcatcttaatcactttcttaacatcacaagccctagctgattgtgaaagtgaa |
208 |
Q |
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| T |
32572771 |
aataatggcttattcagtaactatacacaaagcaatcttcattgttttcatcttaatcacttttttaacatcacaagccctagctgattgtgaaagtgaa |
32572672 |
T |
|
| Q |
209 |
tccacaaacagttgcaacaacaaagaaaaagctcagcctctaaaactcatagccatattctcaatcttagcaactagtgtgattggtgtgtgtttaccct |
308 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32572671 |
tccacaaacagttgcaacaacaaagaaaaggctcagcctctaaaactcatagccatattctcaatcttagcaactagtgtgattggtgtgtgtttaccct |
32572572 |
T |
|
| Q |
309 |
tggcgacacgttcaatcccggctttaagcccagaaggagatcttttcataatcgtgaaatgtttcgcggctggtattattcttgggaccgggttcatgca |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32572571 |
tggcgacacgttcaatcccggctttaagcccagaaggagatcttttcataatcgtgaaatgtttcgcggctggtattattcttgggaccgggttcatgca |
32572472 |
T |
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| Q |
409 |
tgtactccctgattcgtacgagatgttgtggagtg |
443 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32572471 |
tgtactccctgattcgtacgagatgttgtggagtg |
32572437 |
T |
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