View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10577_low_9 (Length: 201)

Name: NF10577_low_9
Description: NF10577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10577_low_9
NF10577_low_9
[»] chr7 (73 HSPs)
chr7 (13-183)||(329413-329583)
chr7 (13-183)||(48445464-48445634)
chr7 (21-177)||(34295394-34295550)
chr7 (13-183)||(11321867-11322038)
chr7 (13-183)||(47953132-47953303)
chr7 (13-183)||(36769551-36769722)
chr7 (24-181)||(41665568-41665725)
chr7 (13-177)||(43158668-43158833)
chr7 (13-171)||(26371791-26371950)
chr7 (19-183)||(18470626-18470791)
chr7 (20-161)||(46633662-46633803)
chr7 (13-161)||(10932539-10932687)
chr7 (27-167)||(26652825-26652965)
chr7 (13-161)||(40753120-40753268)
chr7 (25-161)||(44748660-44748796)
chr7 (13-183)||(3922685-3922856)
chr7 (13-183)||(26994207-26994378)
chr7 (19-160)||(21784837-21784978)
chr7 (28-171)||(18386479-18386623)
chr7 (13-171)||(32873751-32873910)
chr7 (13-171)||(9913480-9913637)
chr7 (13-171)||(9927168-9927325)
chr7 (24-177)||(43368150-43368303)
chr7 (13-161)||(29661288-29661436)
chr7 (13-161)||(30849228-30849376)
chr7 (27-167)||(34117411-34117551)
chr7 (13-161)||(41211182-41211331)
chr7 (24-164)||(22724524-22724664)
chr7 (25-177)||(23349285-23349437)
chr7 (13-177)||(43213907-43214071)
chr7 (13-161)||(47316680-47316828)
chr7 (12-171)||(15035234-15035393)
chr7 (19-162)||(38301307-38301449)
chr7 (18-183)||(43189229-43189396)
chr7 (13-171)||(1363592-1363749)
chr7 (13-174)||(37966926-37967087)
chr7 (13-183)||(1870076-1870248)
chr7 (13-183)||(3892008-3892179)
chr7 (13-183)||(11250564-11250730)
chr7 (18-164)||(22724019-22724165)
chr7 (62-183)||(47947702-47947824)
chr7 (13-167)||(48894676-48894830)
chr7 (13-177)||(20127234-20127402)
chr7 (13-171)||(30598990-30599149)
chr7 (13-138)||(21133360-21133485)
chr7 (28-161)||(46408854-46408987)
chr7 (24-167)||(17237035-17237178)
chr7 (22-183)||(48699341-48699502)
chr7 (13-160)||(26910392-26910537)
chr7 (18-177)||(29372766-29372925)
chr7 (13-167)||(46448626-46448780)
chr7 (13-107)||(34519527-34519621)
chr7 (24-171)||(22631692-22631840)
chr7 (13-167)||(11822190-11822336)
chr7 (37-161)||(46627135-46627259)
chr7 (85-181)||(16963051-16963149)
chr7 (25-171)||(29455843-29455986)
chr7 (13-160)||(41903541-41903683)
chr7 (13-126)||(42332059-42332172)
chr7 (16-96)||(35645477-35645556)
chr7 (24-90)||(16963174-16963240)
chr7 (15-96)||(8360583-8360663)
chr7 (98-159)||(6329861-6329922)
chr7 (65-150)||(29992729-29992813)
chr7 (14-90)||(8413239-8413313)
chr7 (56-116)||(8453285-8453344)
chr7 (68-152)||(38360045-38360129)
chr7 (18-117)||(7958635-7958733)
chr7 (35-88)||(2048989-2049042)
chr7 (140-181)||(30260016-30260057)
chr7 (18-167)||(14608381-14608528)
chr7 (40-152)||(21408635-21408746)
chr7 (69-164)||(44668769-44668865)
[»] chr1 (82 HSPs)
chr1 (13-183)||(6029357-6029527)
chr1 (14-171)||(45658781-45658938)
chr1 (13-162)||(50382459-50382608)
chr1 (13-183)||(16386801-16386972)
chr1 (13-176)||(16437317-16437480)
chr1 (13-183)||(45490931-45491102)
chr1 (13-167)||(25539819-25539973)
chr1 (18-167)||(31004096-31004245)
chr1 (19-183)||(15539952-15540116)
chr1 (13-183)||(844780-844951)
chr1 (13-183)||(26118271-26118442)
chr1 (13-183)||(28340359-28340530)
chr1 (13-183)||(16476211-16476381)
chr1 (18-183)||(42510472-42510638)
chr1 (13-183)||(6711102-6711273)
chr1 (13-167)||(6144042-6144196)
chr1 (13-167)||(11772688-11772842)
chr1 (13-161)||(32270323-32270471)
chr1 (18-177)||(35387372-35387532)
chr1 (13-161)||(50540314-50540462)
chr1 (24-171)||(1351502-1351649)
chr1 (13-161)||(12890208-12890356)
chr1 (24-167)||(13994142-13994285)
chr1 (13-161)||(16451097-16451245)
chr1 (13-171)||(17887906-17888066)
chr1 (13-161)||(30105736-30105884)
chr1 (13-160)||(32289400-32289547)
chr1 (20-177)||(50304605-50304762)
chr1 (13-161)||(51264465-51264613)
chr1 (37-167)||(38663096-38663226)
chr1 (19-177)||(42512832-42512990)
chr1 (13-183)||(24339694-24339864)
chr1 (13-181)||(39281844-39282012)
chr1 (19-177)||(41967911-41968070)
chr1 (13-183)||(41972859-41973029)
chr1 (13-167)||(10384331-10384485)
chr1 (13-174)||(16704682-16704844)
chr1 (13-183)||(38087052-38087222)
chr1 (27-161)||(42705308-42705442)
chr1 (13-177)||(7183871-7184036)
chr1 (37-161)||(1601143-1601267)
chr1 (18-161)||(3414914-3415058)
chr1 (13-171)||(44738098-44738256)
chr1 (18-161)||(17327710-17327853)
chr1 (13-132)||(26764851-26764970)
chr1 (18-180)||(46154850-46155020)
chr1 (18-151)||(49303415-49303547)
chr1 (25-183)||(51703232-51703389)
chr1 (13-135)||(5109725-5109846)
chr1 (72-183)||(20495006-20495118)
chr1 (13-171)||(504447-504605)
chr1 (46-171)||(34663886-34664012)
chr1 (18-164)||(570353-570501)
chr1 (37-167)||(25343289-25343419)
chr1 (20-161)||(32467883-32468025)
chr1 (13-121)||(7837143-7837251)
chr1 (13-171)||(2761612-2761769)
chr1 (18-107)||(26733579-26733668)
chr1 (44-125)||(46815816-46815897)
chr1 (18-117)||(6771382-6771481)
chr1 (20-171)||(39738900-39739051)
chr1 (82-183)||(52030330-52030431)
chr1 (24-90)||(23799604-23799670)
chr1 (35-169)||(40610684-40610818)
chr1 (47-138)||(16643272-16643361)
chr1 (24-96)||(39792842-39792914)
chr1 (24-156)||(46447639-46447771)
chr1 (24-106)||(21763170-21763252)
chr1 (53-165)||(20986333-20986445)
chr1 (25-132)||(32215291-32215398)
chr1 (24-167)||(34283883-34284028)
chr1 (101-158)||(7836573-7836630)
chr1 (19-88)||(17291622-17291690)
chr1 (87-171)||(8838898-8838987)
chr1 (90-166)||(30798824-30798900)
chr1 (129-183)||(21071672-21071726)
chr1 (18-75)||(7837430-7837487)
chr1 (18-115)||(30105007-30105104)
chr1 (24-164)||(31574320-31574461)
chr1 (57-182)||(33316367-33316491)
chr1 (12-72)||(3560205-3560265)
chr1 (28-72)||(30798662-30798706)
[»] chr4 (98 HSPs)
chr4 (13-183)||(3649578-3649748)
chr4 (13-183)||(26083280-26083451)
chr4 (24-183)||(39078603-39078762)
chr4 (24-183)||(44324327-44324486)
chr4 (25-183)||(56154562-56154721)
chr4 (19-161)||(20802511-20802653)
chr4 (19-180)||(22318364-22318525)
chr4 (24-183)||(23521821-23521981)
chr4 (13-161)||(33552816-33552964)
chr4 (24-183)||(53200628-53200788)
chr4 (25-183)||(29785523-29785682)
chr4 (19-177)||(37695521-37695679)
chr4 (19-177)||(47642471-47642629)
chr4 (13-183)||(55065307-55065477)
chr4 (19-164)||(43641060-43641205)
chr4 (24-171)||(9512325-9512473)
chr4 (19-167)||(52949679-52949826)
chr4 (13-171)||(20694324-20694483)
chr4 (13-161)||(50727887-50728035)
chr4 (13-161)||(50735901-50736049)
chr4 (13-183)||(2725107-2725277)
chr4 (19-171)||(44649144-44649294)
chr4 (19-167)||(50178472-50178621)
chr4 (13-161)||(21579990-21580138)
chr4 (13-183)||(24002279-24002451)
chr4 (13-171)||(24210271-24210431)
chr4 (13-177)||(32181211-32181375)
chr4 (13-160)||(33177006-33177153)
chr4 (13-183)||(36743662-36743833)
chr4 (13-183)||(9807098-9807267)
chr4 (19-161)||(37865717-37865859)
chr4 (13-166)||(41711806-41711959)
chr4 (13-177)||(46680484-46680649)
chr4 (13-145)||(38812500-38812632)
chr4 (13-161)||(55593849-55593997)
chr4 (13-183)||(6776519-6776690)
chr4 (19-177)||(21202687-21202845)
chr4 (13-183)||(49152074-49152244)
chr4 (13-183)||(29592837-29593007)
chr4 (27-169)||(30942744-30942886)
chr4 (18-177)||(12600833-12600993)
chr4 (13-183)||(34929856-34930027)
chr4 (13-183)||(38486231-38486402)
chr4 (19-183)||(20518002-20518167)
chr4 (13-161)||(36885895-36886044)
chr4 (13-177)||(54542937-54543101)
chr4 (13-161)||(4325755-4325903)
chr4 (13-177)||(11055990-11056154)
chr4 (13-167)||(16320479-16320631)
chr4 (13-167)||(2786922-2787076)
chr4 (25-183)||(37931862-37932020)
chr4 (19-151)||(36497191-36497323)
chr4 (27-167)||(50186486-50186626)
chr4 (24-138)||(1231298-1231412)
chr4 (37-167)||(7554955-7555085)
chr4 (13-161)||(52319290-52319435)
chr4 (24-177)||(23327864-23328020)
chr4 (37-183)||(47361411-47361554)
chr4 (19-161)||(42869937-42870077)
chr4 (18-171)||(43739415-43739568)
chr4 (13-118)||(50729516-50729621)
chr4 (13-171)||(29616123-29616277)
chr4 (13-166)||(13110287-13110439)
chr4 (13-119)||(28115258-28115364)
chr4 (25-177)||(7001802-7001952)
chr4 (68-177)||(14296544-14296654)
chr4 (68-177)||(14314792-14314902)
chr4 (13-106)||(2629925-2630018)
chr4 (27-171)||(45577680-45577822)
chr4 (65-159)||(42772724-42772818)
chr4 (24-92)||(25978596-25978664)
chr4 (19-160)||(9947894-9948035)
chr4 (35-167)||(43893535-43893667)
chr4 (68-161)||(56487281-56487374)
chr4 (19-160)||(10587009-10587141)
chr4 (20-167)||(52755478-52755625)
chr4 (19-81)||(42772832-42772894)
chr4 (18-126)||(52673810-52673918)
chr4 (40-106)||(38520518-38520584)
chr4 (13-171)||(43189737-43189894)
chr4 (24-165)||(44355839-44355981)
chr4 (35-180)||(20644237-20644382)
chr4 (24-113)||(21098546-21098635)
chr4 (80-167)||(985241-985327)
chr4 (40-171)||(31445878-31446007)
chr4 (56-133)||(40792409-40792486)
chr4 (48-159)||(3579089-3579201)
chr4 (24-167)||(7381238-7381378)
chr4 (53-167)||(9435356-9435471)
chr4 (15-158)||(41897334-41897477)
chr4 (65-171)||(41720797-41720903)
chr4 (125-177)||(10184875-10184927)
chr4 (129-171)||(32858277-32858319)
chr4 (24-106)||(37859244-37859326)
chr4 (122-171)||(53343560-53343610)
chr4 (19-72)||(6973893-6973946)
chr4 (24-117)||(7475080-7475173)
chr4 (141-174)||(25978672-25978705)
[»] chr3 (69 HSPs)
chr3 (19-183)||(3867630-3867794)
chr3 (13-183)||(51925183-51925353)
chr3 (13-181)||(3864650-3864818)
chr3 (13-183)||(34026606-34026777)
chr3 (24-183)||(3964228-3964387)
chr3 (19-167)||(31883003-31883151)
chr3 (19-167)||(33364759-33364907)
chr3 (13-183)||(12349146-12349317)
chr3 (13-183)||(24571220-24571391)
chr3 (24-161)||(28675752-28675889)
chr3 (24-167)||(29646021-29646165)
chr3 (13-183)||(20609623-20609794)
chr3 (13-183)||(21221335-21221506)
chr3 (13-164)||(51259755-51259906)
chr3 (24-177)||(26282373-26282527)
chr3 (13-151)||(49748886-49749024)
chr3 (13-167)||(54622771-54622925)
chr3 (19-183)||(38213293-38213458)
chr3 (13-171)||(39052813-39052973)
chr3 (13-161)||(1344682-1344830)
chr3 (13-161)||(47958407-47958555)
chr3 (13-183)||(25860396-25860567)
chr3 (13-164)||(40094462-40094613)
chr3 (13-160)||(51296544-51296691)
chr3 (13-183)||(53557770-53557941)
chr3 (13-161)||(4851433-4851579)
chr3 (19-183)||(29584814-29584979)
chr3 (13-177)||(44116884-44117049)
chr3 (25-183)||(42636390-42636549)
chr3 (13-167)||(21373887-21374040)
chr3 (25-161)||(2135032-2135168)
chr3 (13-120)||(19906765-19906872)
chr3 (38-171)||(5442242-5442376)
chr3 (19-177)||(50386437-50386595)
chr3 (24-161)||(20255007-20255143)
chr3 (13-177)||(25927302-25927467)
chr3 (13-177)||(44000207-44000371)
chr3 (13-177)||(22484718-22484882)
chr3 (47-161)||(3695301-3695415)
chr3 (15-144)||(24721463-24721593)
chr3 (13-171)||(45690881-45691033)
chr3 (13-167)||(50678752-50678908)
chr3 (62-166)||(41694925-41695029)
chr3 (41-167)||(44267698-44267824)
chr3 (19-169)||(34351349-34351499)
chr3 (18-118)||(52300442-52300541)
chr3 (18-116)||(39215449-39215547)
chr3 (77-177)||(10747163-10747264)
chr3 (19-167)||(25954407-25954554)
chr3 (62-161)||(53046670-53046764)
chr3 (19-132)||(8648538-8648651)
chr3 (18-163)||(6179392-6179531)
chr3 (22-167)||(25395570-25395715)
chr3 (28-167)||(28624910-28625048)
chr3 (19-130)||(32768585-32768696)
chr3 (63-171)||(8067082-8067190)
chr3 (68-164)||(32621828-32621924)
chr3 (18-106)||(14155441-14155528)
chr3 (19-167)||(26847281-26847431)
chr3 (107-161)||(43175531-43175585)
chr3 (24-107)||(17264658-17264741)
chr3 (25-168)||(42035665-42035808)
chr3 (82-171)||(16145865-16145954)
chr3 (34-107)||(19190717-19190789)
chr3 (21-161)||(30258835-30258974)
chr3 (28-123)||(26106617-26106712)
chr3 (41-167)||(27176400-27176525)
chr3 (19-60)||(41683034-41683075)
chr3 (19-126)||(36772017-36772122)
[»] chr8 (63 HSPs)
chr8 (13-183)||(29611051-29611221)
chr8 (13-164)||(8673051-8673202)
chr8 (13-167)||(35225617-35225771)
chr8 (13-183)||(37618388-37618558)
chr8 (13-177)||(37664279-37664444)
chr8 (25-161)||(15001428-15001563)
chr8 (24-183)||(32303592-32303752)
chr8 (13-183)||(27103897-27104068)
chr8 (13-171)||(34063078-34063237)
chr8 (19-177)||(10467009-10467167)
chr8 (13-171)||(29563222-29563381)
chr8 (13-183)||(45446393-45446564)
chr8 (13-183)||(4052420-4052589)
chr8 (13-160)||(12753321-12753468)
chr8 (13-167)||(29672319-29672474)
chr8 (19-177)||(7591449-7591607)
chr8 (13-167)||(39642838-39642992)
chr8 (24-161)||(6386537-6386674)
chr8 (24-183)||(32020008-32020168)
chr8 (19-167)||(41548573-41548721)
chr8 (13-161)||(41709738-41709886)
chr8 (13-160)||(30543018-30543165)
chr8 (13-171)||(31513579-31513738)
chr8 (13-164)||(31732022-31732173)
chr8 (13-183)||(16485805-16485975)
chr8 (25-161)||(3251664-3251800)
chr8 (13-161)||(5968860-5969008)
chr8 (13-161)||(34101469-34101617)
chr8 (25-171)||(13406943-13407090)
chr8 (13-160)||(40389002-40389149)
chr8 (13-167)||(30501100-30501254)
chr8 (13-169)||(10656682-10656838)
chr8 (13-161)||(14005040-14005188)
chr8 (19-166)||(22999213-22999361)
chr8 (24-183)||(45113994-45114153)
chr8 (13-161)||(7394810-7394958)
chr8 (18-161)||(25478204-25478347)
chr8 (13-145)||(17805667-17805800)
chr8 (19-117)||(21272689-21272787)
chr8 (40-167)||(6460218-6460344)
chr8 (37-173)||(27109561-27109699)
chr8 (27-164)||(10320287-10320424)
chr8 (13-183)||(16595145-16595315)
chr8 (19-115)||(37861866-37861962)
chr8 (39-177)||(17520546-17520678)
chr8 (39-177)||(10932681-10932819)
chr8 (80-179)||(37474662-37474761)
chr8 (18-160)||(54133-54274)
chr8 (13-166)||(36426243-36426398)
chr8 (57-171)||(15351687-15351800)
chr8 (19-126)||(22756413-22756520)
chr8 (19-95)||(5892095-5892171)
chr8 (13-156)||(10531244-10531387)
chr8 (13-107)||(3800939-3801033)
chr8 (53-133)||(14958948-14959027)
chr8 (98-165)||(32918842-32918909)
chr8 (63-160)||(5859518-5859615)
chr8 (68-177)||(28746268-28746377)
chr8 (74-169)||(4599615-4599711)
chr8 (140-171)||(9624188-9624219)
chr8 (53-107)||(11944890-11944944)
chr8 (65-126)||(11926878-11926939)
chr8 (13-101)||(8073186-8073274)
[»] chr2 (66 HSPs)
chr2 (13-183)||(6896107-6896277)
chr2 (13-161)||(19513670-19513818)
chr2 (13-183)||(33889181-33889352)
chr2 (13-161)||(9732911-9733059)
chr2 (18-166)||(13829394-13829542)
chr2 (13-183)||(44284567-44284738)
chr2 (13-183)||(5278815-5278986)
chr2 (27-177)||(30798484-30798635)
chr2 (13-183)||(32497853-32498024)
chr2 (13-164)||(34338768-34338919)
chr2 (13-177)||(18685780-18685945)
chr2 (13-161)||(7761554-7761702)
chr2 (13-161)||(16104235-16104383)
chr2 (13-183)||(17540652-17540824)
chr2 (13-161)||(35114746-35114894)
chr2 (13-181)||(30712798-30712969)
chr2 (13-167)||(32766485-32766640)
chr2 (13-177)||(42706302-42706468)
chr2 (24-161)||(2645078-2645215)
chr2 (13-177)||(33366554-33366719)
chr2 (24-164)||(3913452-3913592)
chr2 (13-183)||(7258834-7259006)
chr2 (25-161)||(37003861-37003997)
chr2 (13-171)||(40832450-40832610)
chr2 (13-166)||(41934537-41934690)
chr2 (24-164)||(9717182-9717322)
chr2 (24-171)||(10399862-10400009)
chr2 (18-160)||(26418885-26419027)
chr2 (13-138)||(12939281-12939406)
chr2 (13-161)||(42365538-42365686)
chr2 (13-167)||(16177864-16178016)
chr2 (18-164)||(30326318-30326463)
chr2 (24-177)||(28824549-28824702)
chr2 (13-163)||(38623285-38623431)
chr2 (13-158)||(38993052-38993197)
chr2 (13-164)||(11114830-11114981)
chr2 (24-151)||(12672466-12672593)
chr2 (13-171)||(37308606-37308764)
chr2 (18-183)||(40692243-40692401)
chr2 (19-176)||(1247101-1247250)
chr2 (24-163)||(41366102-41366239)
chr2 (25-171)||(2086022-2086169)
chr2 (38-183)||(39461252-39461401)
chr2 (37-151)||(4641487-4641601)
chr2 (37-171)||(45463115-45463248)
chr2 (18-171)||(27462788-27462939)
chr2 (47-169)||(20907542-20907664)
chr2 (19-179)||(37088216-37088376)
chr2 (13-104)||(26981690-26981781)
chr2 (68-161)||(18793297-18793390)
chr2 (13-169)||(35472981-35473137)
chr2 (19-171)||(8112248-8112403)
chr2 (35-133)||(26796218-26796315)
chr2 (28-161)||(130255-130393)
chr2 (19-96)||(36843488-36843565)
chr2 (19-166)||(25383087-25383240)
chr2 (25-96)||(18278928-18278999)
chr2 (13-95)||(38786512-38786592)
chr2 (23-117)||(18126979-18127073)
chr2 (22-126)||(2394266-2394371)
chr2 (68-172)||(7294427-7294531)
chr2 (24-96)||(15303232-15303304)
chr2 (38-152)||(1230881-1230995)
chr2 (53-117)||(13249421-13249485)
chr2 (19-79)||(35170200-35170260)
chr2 (24-72)||(40767207-40767255)
[»] chr5 (50 HSPs)
chr5 (13-180)||(18470415-18470582)
chr5 (18-183)||(32528653-32528819)
chr5 (13-177)||(39788136-39788302)
chr5 (12-171)||(8560968-8561126)
chr5 (13-167)||(3735312-3735466)
chr5 (21-167)||(31644401-31644547)
chr5 (19-183)||(31880069-31880234)
chr5 (13-183)||(31770578-31770749)
chr5 (20-161)||(4818134-4818275)
chr5 (13-183)||(7523109-7523281)
chr5 (13-161)||(34794848-34794996)
chr5 (37-183)||(40182402-40182549)
chr5 (18-183)||(24181616-24181782)
chr5 (13-183)||(32092969-32093138)
chr5 (13-161)||(21739148-21739296)
chr5 (19-172)||(553345-553500)
chr5 (13-171)||(11963291-11963450)
chr5 (13-160)||(39918469-39918616)
chr5 (19-161)||(2351641-2351783)
chr5 (13-182)||(28090507-28090677)
chr5 (13-183)||(5571631-5571800)
chr5 (13-161)||(35701238-35701386)
chr5 (14-161)||(22493407-22493553)
chr5 (13-171)||(24036183-24036339)
chr5 (13-167)||(7725796-7725950)
chr5 (18-161)||(6284290-6284434)
chr5 (28-160)||(7208232-7208364)
chr5 (24-171)||(41790460-41790608)
chr5 (37-183)||(29241316-29241463)
chr5 (24-170)||(40489288-40489435)
chr5 (13-171)||(4689685-4689843)
chr5 (18-177)||(700593-700753)
chr5 (13-167)||(7770266-7770420)
chr5 (13-156)||(41459555-41459697)
chr5 (19-135)||(22432302-22432418)
chr5 (13-160)||(5673106-5673248)
chr5 (19-161)||(8136800-8136940)
chr5 (13-167)||(23091291-23091446)
chr5 (84-179)||(37148632-37148727)
chr5 (35-133)||(27839082-27839180)
chr5 (13-147)||(17031132-17031266)
chr5 (24-119)||(5598483-5598578)
chr5 (13-161)||(6311647-6311794)
chr5 (28-96)||(11090870-11090938)
chr5 (129-169)||(14011549-14011589)
chr5 (56-171)||(29788489-29788601)
chr5 (24-68)||(37148587-37148631)
chr5 (19-74)||(14011246-14011301)
chr5 (18-51)||(36175076-36175109)
chr5 (120-183)||(20119709-20119775)
[»] scaffold0650 (1 HSPs)
scaffold0650 (13-166)||(1630-1783)
[»] scaffold0280 (1 HSPs)
scaffold0280 (24-167)||(13685-13828)
[»] scaffold0050 (1 HSPs)
scaffold0050 (25-165)||(42949-43088)
[»] chr6 (54 HSPs)
chr6 (13-171)||(10959951-10960109)
chr6 (13-171)||(31870120-31870278)
chr6 (19-167)||(10485112-10485260)
chr6 (13-171)||(2614846-2615005)
chr6 (13-164)||(18597178-18597329)
chr6 (25-183)||(24242602-24242761)
chr6 (13-183)||(32132400-32132571)
chr6 (24-177)||(3932838-3932992)
chr6 (18-183)||(32409877-32410043)
chr6 (19-171)||(3259633-3259786)
chr6 (25-183)||(166955-167114)
chr6 (13-160)||(15276957-15277104)
chr6 (13-183)||(17443201-17443371)
chr6 (24-161)||(11613822-11613959)
chr6 (13-161)||(10324131-10324279)
chr6 (13-161)||(15277300-15277448)
chr6 (13-161)||(17867796-17867944)
chr6 (13-161)||(17877579-17877727)
chr6 (18-183)||(14925481-14925646)
chr6 (18-183)||(18057458-18057623)
chr6 (19-177)||(34176774-34176933)
chr6 (19-183)||(24203301-24203465)
chr6 (18-175)||(9902683-9902841)
chr6 (18-160)||(11279090-11279232)
chr6 (12-160)||(29054319-29054466)
chr6 (13-151)||(3290643-3290779)
chr6 (13-146)||(11382040-11382171)
chr6 (19-177)||(3379656-3379813)
chr6 (28-177)||(8177916-8178067)
chr6 (13-183)||(32859990-32860160)
chr6 (13-145)||(34684005-34684136)
chr6 (27-167)||(14808035-14808174)
chr6 (13-171)||(11675394-11675553)
chr6 (18-183)||(11212195-11212361)
chr6 (41-177)||(27824698-27824834)
chr6 (27-126)||(4494149-4494248)
chr6 (12-171)||(7396145-7396301)
chr6 (53-183)||(23636162-23636292)
chr6 (19-171)||(35004154-35004306)
chr6 (56-171)||(29202990-29203104)
chr6 (19-98)||(9200414-9200493)
chr6 (39-160)||(29424613-29424734)
chr6 (13-167)||(9613928-9614083)
chr6 (24-169)||(5650735-5650880)
chr6 (100-161)||(29814826-29814887)
chr6 (110-171)||(13412649-13412710)
chr6 (57-113)||(27756314-27756370)
chr6 (63-162)||(7365347-7365446)
chr6 (37-76)||(13415781-13415820)
chr6 (13-72)||(24785105-24785164)
chr6 (100-151)||(28502431-28502482)
chr6 (39-160)||(8342639-8342761)
chr6 (80-158)||(16542362-16542440)
chr6 (101-183)||(32614046-32614128)
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-177)||(101893-102058)
[»] scaffold0169 (2 HSPs)
scaffold0169 (13-177)||(18041-18206)
scaffold0169 (18-177)||(12528-12688)
[»] scaffold0208 (1 HSPs)
scaffold0208 (13-183)||(2325-2496)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-159)||(15135-15281)
[»] scaffold0098 (1 HSPs)
scaffold0098 (13-177)||(51383-51547)
[»] scaffold0004 (1 HSPs)
scaffold0004 (24-161)||(372962-373099)
[»] scaffold0729 (1 HSPs)
scaffold0729 (13-183)||(4566-4737)
[»] scaffold0181 (1 HSPs)
scaffold0181 (28-177)||(19092-19242)
[»] scaffold0025 (1 HSPs)
scaffold0025 (37-183)||(5451-5597)
[»] scaffold0054 (2 HSPs)
scaffold0054 (13-161)||(23538-23684)
scaffold0054 (24-171)||(19858-20005)
[»] scaffold0957 (1 HSPs)
scaffold0957 (18-171)||(2488-2641)
[»] scaffold0360 (2 HSPs)
scaffold0360 (24-161)||(15379-15512)
scaffold0360 (19-133)||(13572-13686)
[»] scaffold0155 (1 HSPs)
scaffold0155 (13-160)||(33532-33678)
[»] scaffold0077 (1 HSPs)
scaffold0077 (23-172)||(7455-7608)
[»] scaffold0062 (1 HSPs)
scaffold0062 (81-174)||(3683-3776)
[»] scaffold0021 (1 HSPs)
scaffold0021 (19-160)||(111068-111206)
[»] scaffold0047 (1 HSPs)
scaffold0047 (13-75)||(19143-19205)
[»] scaffold0831 (1 HSPs)
scaffold0831 (12-66)||(3169-3223)
[»] scaffold0189 (1 HSPs)
scaffold0189 (121-157)||(13256-13292)


Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 329583 - 329413
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  329583 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagcattt 329484  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  329483 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 329413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 48445634 - 48445464
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| ||||  ||||||||||||| | | ||||||||||||||||||| |||||| |||||    
T  48445634 gcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataacattt 48445535  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  48445534 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgcct 48445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 34295394 - 34295550
Alignment:
Q  21 caagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccc 120  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  34295394 caagacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccccc 34295493  T
Q  121 aaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||| ||| |||||    
T  34295494 aaaaatcatataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgtt 34295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 11321867 - 11322038
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11321867 gcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 11321966  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||||||||| |||||    
T  11321967 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgcct 11322038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 47953303 - 47953132
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47953303 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 47953204  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  47953203 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 47953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 36769551 - 36769722
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36769551 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 36769650  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| | |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  36769651 tgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 36769722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 41665568 - 41665725
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| ||| ||||||    
T  41665568 gacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaa 41665667  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgc 181  Q
    ||| ||||||||||  |||||||||||||||||||||||||||| ||| || ||||||    
T  41665668 aattatataaaacagaaaattattcaataccataaaaatttgtcttgtgctattatgc 41665725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 43158668 - 43158833
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43158668 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcattt 43158767  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| |||||||||    
T  43158768 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgtt 43158833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 26371791 - 26371950
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  26371791 gcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattt 26371890  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| |||||||||| |||||||||||| |||| |||||||||||||||    
T  26371891 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgt 26371950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 18470791 - 18470626
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18470791 gacaggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 18470692  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
     ||||||||||||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  18470691 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 18470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 46633803 - 46633662
Alignment:
Q  20 acaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    |||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  46633803 acaagacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccct 46633704  T
Q  120 caaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||| |||||||||| |||||| ||||| |||||||||    
T  46633703 caaaaatcgtataaaacaaaaaattactcaatgccataaaaa 46633662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 10932539 - 10932687
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10932539 gcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 10932638  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  10932639 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 10932687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 26652965 - 26652825
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  26652965 aaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaat 26652866  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | |||||||||| ||||||||||||  ||||||||||||||    
T  26652865 cgtataaaacaaaaaattattcaatgtcataaaaatttgtc 26652825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 40753268 - 40753120
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40753268 gcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 40753169  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  40753168 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 40753120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 44748796 - 44748660
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44748796 acaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaa 44748697  T
Q  125 atcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||| |||||||||| |||||| ||| | |||||||||    
T  44748696 atcgtataaaacaaaaaattactcattgccataaaaa 44748660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 3922685 - 3922856
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  3922685 gcaagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattt 3922784  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| ||| || ||||| |||| ||||||||||| ||| ||||| |||||    
T  3922785 tgtccctcaaaaatcgtataaaacaaaaaaatactcaatgccataaaaaatttgtcctgtgctgttctgcct 3922856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 26994207 - 26994378
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| || | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26994207 gcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 26994306  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||  ||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  26994307 tgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 26994378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 21784978 - 21784837
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  21784978 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcct 21784879  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||| |||||||||  |||||| ||||| ||||||||    
T  21784878 ccaaaaatcgtataaaacataaaattactcaatgccataaaa 21784837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 18386623 - 18386479
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatc 127  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18386623 aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatc 18386524  T
Q  128 atataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
     |||||||||| |||||| |||||  ||| |||||||||||||||    
T  18386523 gtataaaacaaaaaattactcaatgtcataaaaaatttgtcatgt 18386479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 32873751 - 32873910
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  32873751 gcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattt 32873850  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  32873851 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 32873910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 9913637 - 9913480
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||    
T  9913637 gcaagggacaggacaaaaattgatatttt-gtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacattt 9913539  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     |||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||    
T  9913538 cgtcccccaaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgt 9913480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 9927325 - 9927168
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||    
T  9927325 gcaagggacaggacaaaaattgatatttt-gtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacattt 9927227  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     |||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||    
T  9927226 cgtcccccaaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgt 9927168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 24 - 177
Target Start/End: Complemental strand, 43368303 - 43368150
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| | ||    
T  43368303 gacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgtccctccaa 43368204  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||| |||||||||| ||||||||||||   ||||||||||||||||| |||||    
T  43368203 aatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgtt 43368150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 29661436 - 29661288
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  29661436 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattt 29661337  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| | |||||||    
T  29661336 tgtcccacaaaaatcgtataaaacaaaaaattactcaatgctataaaaa 29661288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 30849228 - 30849376
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||||||  |||||||||| ||||| ||||||||| |||||    
T  30849228 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaataacattt 30849327  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||||||||||| |||||||||| |||||| ||||| |||||||||    
T  30849328 tgtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 30849376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 34117551 - 34117411
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||  |||||||||||||| |||||||||||||    
T  34117551 aaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaaaat 34117452  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | |||||||| | |||||||||||| |||||||||||||||    
T  34117451 cgtataaaacgaaaaattattcaatgccataaaaatttgtc 34117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 41211182 - 41211331
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-tt 111  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  41211182 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 41211281  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    || ||||  ||||||| |||||||||| |||||| ||||| |||||||||    
T  41211282 ttatccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 41211331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 22724524 - 22724664
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||| ||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| || |||||||||||| ||| ||||||    
T  22724524 gacaaaagctgcaatttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcgcccaaa 22724623  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||||||| |||  |||||||||||||||| ||||||||    
T  22724624 aatcatataatacagaaaattattcaataccagaaaaattt 22724664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 23349285 - 23349437
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || |||||  ||||| ||||||||| |    
T  23349285 acaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaatgacatttcgtcccccaaca 23349384  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||| || ||||||| ||||||||||||   ||||||||||||||||| |||||    
T  23349385 atcgtagaaaacaaaaaattattcaatgttataaaaatttgtcatgtgctgtt 23349437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 43213907 - 43214071
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||| |||| |||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  43213907 gcaagggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaataccaaaatagcattt 43214006  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     || || |||||||| |||||||||| |||| |||||||  |||||||||||||| ||| |||||    
T  43214007 cgtgcctcaaaaatcctataaaacaaaaaatgattcaatgtcataaaaatttgtcctgtgctgtt 43214071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 47316680 - 47316828
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| ||| | |||||||||||||  |||||||||||||||    
T  47316680 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtctaaattaccaaaatagcattt 47316779  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  47316780 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 47316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 15035234 - 15035393
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    ||||||||||| ||| |||| ||||||| |||| |||||||| |||||| ||||||||||||| |||| ||||| |||||||||| | ||||||| ||||    
T  15035234 agcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgtaccacatacaaattgtctaaaatatcaaaataacatt 15035333  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||| || ||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  15035334 ttgcccaccaaaaatcgtacaaaacaaaaaattattcaataccataaaaatttgtcatgt 15035393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 38301449 - 38301307
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||| |||||||||||    
T  38301449 gacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaatatcaaaataacattttgtccc 38301351  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaat 162  Q
    ||||||||| ||| |||||| ||||||||||||  |||||||||    
T  38301350 ccaaaaatcgtattaaacaaaaaattattcaatgtcataaaaat 38301307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 43189229 - 43189396
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgt-c 116  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||||| ||||||| |    
T  43189229 ggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaataccaaaatagtattttgtcc 43189328  T
Q  117 ccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||| ||| |||||| |||||| ||||| |||| |||||||||||||| ||| || |||||    
T  43189329 ccccaaaaatcgtatgaaacaacaaattactcaatgccataaaaaatttgtcatgcactattctgcct 43189396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 1363749 - 1363592
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||| || ||||||||||||    
T  1363749 gcaagggacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatagcattt 1363650  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     ||  |||||||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  1363649 cgt-acccaaaaattgtataaaacaaaaaattattcaatgccataaaaatttgtcatgt 1363592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 37967087 - 37966926
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||  | |||||||||  |||| | |||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||    
T  37967087 gcaagggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagttatctaaaaatccaaaatagcattt 37966988  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtact 174  Q
     |||||  ||||||| |||||||||| |||||||| |||||||||||||||||| |||||||    
T  37966987 cgtcccaaaaaaatcgtataaaacaaaaaattatttaataccataaaaatttgttatgtact 37966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 1870248 - 1870076
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||    
T  1870248 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattt 1870149  T
Q  113 tgtccc-ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||   ||||||| |||||||||| |||||| |||||  ||| |||||||| |||||| ||||| |||||    
T  1870148 tgtccctaaaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcatgtgctgttctgcct 1870076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 3892008 - 3892179
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  3892008 gcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaataccaaaatagcattt 3892107  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||| || |||||||| | |||||||| |||||| ||||| |||| ||||||||||||| | ||||| |||||    
T  3892108 tgttcctcaaaaatcgtgtaaaacaaaaaattactcaatgccataaaaaatttgtcatatgctgttctgcct 3892179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 11250730 - 11250564
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| | | |||||||||||||||||||||||| |||||||||||||||||      |||||||||||| |||||| ||||||||    
T  11250730 gcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgtcccat-----agttgtctaaaataccaaactagcattt 11250636  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgtactgttatgcct 183  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||| ||| ||||| |||||    
T  11250635 tgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgcct 11250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 22724019 - 22724165
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||||| ||| ||||||| || |||||||||| | ||||||||| ||||||||||||||||| ||||| || |||||||||||| |||     
T  22724019 ggacaggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatacaaaaatagcatttcgtca 22724118  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||    
T  22724119 cccaaaaatcatataatacagaaaattattcaataccataaaaattt 22724165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 183
Target Start/End: Complemental strand, 47947824 - 47947702
Alignment:
Q  62 cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaa 160  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||| ||||| |||| ||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 47947725  T
Q  161 atttgtcatgtactgttatgcct 183  Q
    ||||||||||| ||||| |||||    
T  47947724 atttgtcatgtgctgttctgcct 47947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 48894830 - 48894676
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||  |||| ||||||||||||||||||||||||||||||||| |  |||||||  |||||||| |||||    
T  48894830 gcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaaatcatctaaaaatccaaaataacattt 48894731  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||||||||| |||||||||| |||||||||||| | ||||||| |||||    
T  48894730 tgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtc 48894676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 20127402 - 20127234
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||  |||||    
T  20127402 gcaagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaataccaaaatgacattt 20127303  T
Q  113 tgtcccccaaaaatcatataaaacaaga----aattattcaataccataaaaatttgtcatgtactgtt 177  Q
     |||||||||||||| |||||||||| |    ||| ||||||| | | ||||||||||||||| |||||    
T  20127302 cgtcccccaaaaatcgtataaaacaaaaaaataataattcaatgctacaaaaatttgtcatgtgctgtt 20127234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 30598990 - 30599149
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| || | |||||||||||||| ||||||||| |||||||||||||| || |||||| || ||||||| ||||||||| |||||    
T  30598990 gcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactttttgtctcaagtacaaattatctaaaataccaaaataacattt 30599089  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||||||| ||||||| |||||||||| |||||| |||||  ||| |||||||||||||||    
T  30599090 tgtcccctaaaaatcgtataaaacaacaaattactcaatttcataaaaaatttgtcatgt 30599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 21133485 - 21133360
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||    
T  21133485 gcaagggacaagacaaaaactgatattattttccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaataccaaaatagcattt 21133386  T
Q  113 tgtcccccaaaaatcatataaaacaa 138  Q
     ||| |||||||||| ||||||||||    
T  21133385 cgtctcccaaaaatcgtataaaacaa 21133360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 46408987 - 46408854
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatc 127  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| | ||||||||||| ||||| | ||||||||    
T  46408987 aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtctaaaatatcaaaatagcatattgtctctcaaaaatc 46408888  T
Q  128 atataaaacaagaaattattcaataccataaaaa 161  Q
     ||||||| || |||||| ||||| |||||||||    
T  46408887 gtataaaataaaaaattactcaatgccataaaaa 46408854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 17237178 - 17237035
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||  |||| |||||||| |||||||||||||| ||||||||| || |||||||  |||||||| ||||| ||||||||||    
T  17237178 gacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaaatccaaaataacatttcgtcccccaaa 17237079  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||| |||||||||| |||||||||||| | ||||||| |||||    
T  17237078 aatcttataaaacaaaaaattattcaatgcaataaaaaattgtc 17237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 48699502 - 48699341
Alignment:
Q  22 aagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccca 121  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||  || ||||| | |    
T  48699502 aagacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatagacttatgtccacaa 48699403  T
Q  122 aaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||| || || || | || | ||||||||||||||||  ||||| ||| ||||| |||||    
T  48699402 aaaatcgtacaagaccaaaagtcattcaataccataaaagcttgtcttgtgctgttctgcct 48699341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 26910392 - 26910537
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || |||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| |||| || ||||||| | ||    
T  26910392 gcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttgtcaaaaatacaaaaatagtaatt 26910491  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
     ||| ||||||||||  ||||| ||  |||||||||||||||||||||    
T  26910492 cgtcacccaaaaatc--ataaatcagaaaattattcaataccataaaa 26910537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 29372766 - 29372925
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| |||||||||||| |||| |||||||| ||||||||| ||| ||| |||||||||||||||||   |||| || | |||| |||    
T  29372766 ggacacgacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaatttcaaattaaccttttatcc 29372865  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     ||||||||||||||| || | |||||||| |||||||||||| |||||| |||| ||||    
T  29372866 accaaaaatcatataagaccaaaaattatttaataccataaaagtttgtcttgtattgtt 29372925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 46448626 - 46448780
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||||| | |||||||||| |||| |||||||| ||||||||||||||||| ||| || || |||||||  |||||||| |||||    
T  46448626 gcaagggacatgataaaaactcatatttttgtccgtcactaaaccacagcacaactttttgtcccatgtataaattatctaaaaatccaaaataacattt 46448725  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||| ||||||| |||||||||| |||||||||||| | ||||||| |||||    
T  46448726 cgtcccctaaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtc 46448780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 34519621 - 34519527
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    |||| ||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||    
T  34519621 gcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatacaaaaatag 34519527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 22631840 - 22631692
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||| |||||| |||||||||| ||||||||||||| || ||||||||||   ||||||||||||||||||| ||||||||   |||| ||||||||||    
T  22631840 gacaataactgatatttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaa 22631741  T
Q  124 aatcatataaaac-aagaaattattcaataccataaaaatttgtcatgt 171  Q
    |||| |||||||| || |||||||| ||| |  ||| ||||||||||||    
T  22631740 aatcgtataaaacaaaaaaattatttaatgctctaataatttgtcatgt 22631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 11822336 - 11822190
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| |||| |||||||| ||||||||||||||||||      ||||| |||||   |||||||||||||    
T  11822336 gcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtcccac------gttgtttaaaaattcaaaatagcattt 11822243  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| ||||||| || |||  ||||||| |||||||||||||||    
T  11822242 cgtcccccaaaaatcgtataaaaaaaaaaa--attcaatgccataaaaatttgtc 11822190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 46627259 - 46627135
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||| ||||||| ||||||||| ||||| |||||||| |||||||   |||||||||| || ||||||| |||| ||| |||||||||  ||||||||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtacggattgtctaaaatacaaaaatagtatttcgtctcccaaaaattgtataaaac 46627160  T
Q  137 aagaaattattcaataccataaaaa 161  Q
    || |||||||||||| |||||||||    
T  46627159 aaaaaattattcaatgccataaaaa 46627135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 16963149 - 16963051
Alignment:
Q  85 agttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac-aagaaattattcaataccat-aaaaatttgtcatgtactgttatgc 181  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||||| || |||||| ||||| |||| ||||||||||||||| |||||||||    
T  16963149 agttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcatgtgctgttatgc 16963051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 29455843 - 29455986
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||| ||||||| |||||| || |  ||| ||| |||||||||||||||||| ||| |||| |  |||| ||||||||||| |||||||| ||||||    
T  29455843 acaaaaagtgaaattcttgtccttcgcttaacaacaacacaactttttgtcccacatactagttat--aaaataccaaaatagcgttttgtccaccaaaa 29455940  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     |||||||| || | | ||||||||||||||||||| ||||||||||    
T  29455941 -tcatataagaccaaatattattcaataccataaaagtttgtcatgt 29455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 41903541 - 41903683
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||| | |||||||||||||||||||||| |||| ||||||| |     |||||||  | |  |||||| |||||||||| || |||||||  |||    
T  41903541 gcaaaggatatgacaaaaactgaaatttttgtctctcatcaaaccata-----actttttcgctcgagtacaaattgtctaaaatactaaaatagtcttt 41903635  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||| ||||| |||||||||||||| ||||| ||||| |||||||||    
T  41903636 tgtccaccaaacatcatataaaacaaaaaattgttcaagaccataaaa 41903683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 42332172 - 42332059
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| |||| |||||||||  ||||| | || | |||||||||||||||||||||||||||| ||| ||||| |||||| ||| | ||||||| |||||    
T  42332172 gcaaatgacaggacaaaaacataaattctagttcttcaccaaaccacatcacaactttttgtctcacatacaaattgtcttaaatatcaaaataacattt 42332073  T
Q  113 tgtcccccaaaaat 126  Q
    | ||| ||||||||    
T  42332072 tatccaccaaaaat 42332059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 35645556 - 35645477
Alignment:
Q  16 aaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    ||||||||||||||||||||| || | ||||||||| |||||||| ||||||||||| ||  |||||||||||||||||||    
T  35645556 aaggacaagacaaaaactgaa-ttctcgtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaa 35645477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 16963240 - 16963174
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgt 90  Q
    |||||||||| | |||||||||||| | |||||||||  ||||||||||||||||||||||||||||    
T  16963240 gacaaaaactcatatttttgtcccttatcaaaccacaatacaactttttgtcccacgtacaagttgt 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 8360663 - 8360583
Alignment:
Q  15 aaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    |||||||| |||||||| | ||||| ||||| | ||| |||||||||||||||||||||| || ||||||||||||||||||    
T  8360663 aaaggacatgacaaaaaataaaattcttgtctcacactaaaccacatcacaactttttgt-cctcgtacaagttgtctaaaa 8360583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 6329861 - 6329922
Alignment:
Q  98 accaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaa 159  Q
    ||||||||| |||||||||| |||||||||||||||||  | | ||| ||||||||||||||    
T  6329861 accaaaataacattttgtccaccaaaaatcatataaaatcaaacattgttcaataccataaa 6329922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 29992729 - 29992813
Alignment:
Q  65 aactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaa 150  Q
    ||||||||||| |||||||||||| ||||||| | |||||||   |||||||| ||||||||| ||||| || | |||||||||||    
T  29992729 aactttttgtctcacgtacaagttatctaaaata-caaaataattttttgtccaccaaaaatcgtataagaccaaaaattattcaa 29992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 8413313 - 8413239
Alignment:
Q  14 caaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgt 90  Q
    ||||||||| |||||||| | ||||| ||||||||||| |||||||||||||  ||||||| || ||||||||||||    
T  8413313 caaaggacatgacaaaaatt-aaattcttgtccctcactaaaccacatcacagttttttgt-cctcgtacaagttgt 8413239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 8453344 - 8453285
Alignment:
Q  56 ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtc 116  Q
    ||||||||||||||||||| || ||||||| |||||||||| | ||||||| |||||||||    
T  8453344 ccacatcacaactttttgt-cctcgtacaaattgtctaaaatatcaaaataacattttgtc 8453285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 38360129 - 38360045
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaata 152  Q
    |||||||| ||| |||||||||| ||||| || ||||||  |||||||||  ||||||| ||||| ||| | |||||||||||||    
T  38360129 tttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattatatagaaccaaaaattattcaata 38360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 7958733 - 7958635
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| || ||||| ||||||||||||| ||||| || | | | || |||||||||||  | ||||||||||||||||| ||||||||||  ||||||||    
T  7958733 ggacatgagaaaaagtgaaatttttgtcactcactaatc-atagcataactttttgtctgaagtacaagttgtctaaaataccaaaatagttttttgtcc 7958635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 2049042 - 2048989
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagtt 88  Q
    |||||||||||| |||| |||||||| || ||| |||||||||||||| |||||    
T  2049042 aaatttttgtccatcactaaaccacaacaaaacattttgtcccacgtagaagtt 2048989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 30260016 - 30260057
Alignment:
Q  140 aaattattcaataccataaaaatttgtcatgtactgttatgc 181  Q
    ||||||||||||| |||||||||||||| |||||| ||||||    
T  30260016 aaattattcaatatcataaaaatttgtcttgtacttttatgc 30260057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 14608381 - 14608528
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttg-tc 116  Q
    |||||||| ||||| ||||||| |||||| |||| ||||   |||| || |||| |||| | |||||| ||||||| || || |||||| | ||||  ||    
T  14608381 ggacaagagaaaaattgaaattcttgtccatcactaaac---atcaaaaattttagtccgaagtacaatttgtctacaatactaaaataaccttttaatc 14608477  T
Q  117 ccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | ||||||||||||||| |  | ||||| || |||||||||||| ||||||    
T  14608478 cgccaaaaatcatataagatcaaaaattgtttaataccataaaagtttgtc 14608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 21408635 - 21408746
Alignment:
Q  40 tttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaag 139  Q
    |||||||||||  |||||||| || |||||||| |  || ||||||||| ||||||| || |||||||  ||| |||| | ||||||| ||||| | ||     
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagttatctaaaatacaaaaatag-ttttcgtccactaaaaatcgtataagataaa 21408733  T
Q  140 aaattattcaata 152  Q
    |||||||||||||    
T  21408734 aaattattcaata 21408746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 44668865 - 44668769
Alignment:
Q  69 ttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtc-ccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    ||||||| ||| ||||| || || |||| ||||||||||| |||||||   ||||||||| ||||| | || |||||||| ||||| ||||||||||    
T  44668865 ttttgtctcacatacaaattttcaaaaataccaaaatagctttttgtcgatccaaaaatcgtataagataaaaaattatttaatactataaaaattt 44668769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 6e-73; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 6029357 - 6029527
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6029357 gcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacattt 6029456  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  6029457 cgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttatgcct 6029527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 45658938 - 45658781
Alignment:
Q  14 caaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt 113  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||||||| | ||| |||||||||||||||     
T  45658938 caaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttc 45658839  T
Q  114 gtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  45658838 gtcccccaaaaatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgt 45658781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 50382459 - 50382608
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  50382459 gcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattt 50382558  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaat 162  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  50382559 tgtccctcaaaaatcatataaaacaaaatattattcaataccataaaaat 50382608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 16386972 - 16386801
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16386972 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 16386873  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  16386872 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 16386801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 16437480 - 16437317
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  16437480 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 16437381  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgt 176  Q
    |||||  |||||||| |||||||||| |||||| ||||| ||||||||||||||| ||||||||    
T  16437380 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtactgt 16437317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 45490931 - 45491102
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45490931 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 45491030  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| ||||| |||||||||||||| ||||| |||||    
T  45491031 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatacaaaatttgtcatgtgctgttctgcct 45491102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 25539973 - 25539819
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||| |||||||||||||||    
T  25539973 gcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcattt 25539874  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||||||||||  |||||||||||||||    
T  25539873 cgtcccccaaaaatcgtataaaacaaaaaattattcaaagccataaaaatttgtc 25539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 31004245 - 31004096
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  31004245 ggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtcc 31004146  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  31004145 cccaaaaatcctataaaacaaaaaattattcaatgccataaaaatttgtc 31004096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 15539952 - 15540116
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| ||||||| |||||| |||||||  ||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||    
T  15539952 gacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtccc 15540051  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||    
T  15540052 ccaaaaatcatataaaacaaaaaattattcaataccataaaaacttgtcatgtgttgttatgcct 15540116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 844780 - 844951
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  844780 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 844879  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  844880 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 844951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 26118271 - 26118442
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  26118271 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaataccaaaatagcattt 26118370  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||||| |||||    
T  26118371 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgcct 26118442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 28340359 - 28340530
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  28340359 gcaagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 28340458  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||| ||||||||||||||| |||||    
T  28340459 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcatgtactgttctgcct 28340530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 16476211 - 16476381
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16476211 gcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 16476310  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||  |||||||||  |||||||||||| ||||| |||||||||||||  ||||||||||    
T  16476311 tgtcccccaaaaattgtataaaacataaaattattcaatgccatacaaatttgtcatgtggtgttatgcct 16476381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 42510638 - 42510472
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42510638 ggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 42510539  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    | |||||||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||||| |||||    
T  42510538 ctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgcct 42510472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 6711102 - 6711273
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  6711102 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 6711201  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  6711202 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgcct 6711273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 6144042 - 6144196
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||| ||||||||||||||  ||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||| |||||    
T  6144042 gcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtctaaaacacaaaaataacattt 6144141  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6144142 tgtcacccaaaaatcatataaaacagaaaattattcaataccataaaaatttgtc 6144196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 11772688 - 11772842
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |||| | ||| |||||||||| ||||    
T  11772688 gcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagtattt 11772787  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||| |||||| ||||||||||||||||    
T  11772788 cgtcccccaaaaatcgtataaaacaaaaaataattcaaaaccataaaaatttgtc 11772842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 32270471 - 32270323
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  32270471 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattt 32270372  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| ||||||||||||||||||| |||||| ||||| |||||||||    
T  32270371 tgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaa 32270323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 35387372 - 35387532
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||    
T  35387372 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatcc 35387471  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    | |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| |||||    
T  35387472 ctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgtt 35387532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 50540462 - 50540314
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||| ||||| | |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50540462 gcaagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 50540363  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  50540362 tgtcccccaaaaatcatataaaacaacaaattactcaatgccataaaaa 50540314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 1351502 - 1351649
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  1351502 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctctcaaa 1351601  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||||||||||||||| ||| || ||||| |||| |||||||||||||||    
T  1351602 aatcatataaaacaa-aaaatactcaatgccataaaaaatttgtcatgt 1351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 12890356 - 12890208
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  12890356 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaaatagcattt 12890257  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  12890256 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 12890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 13994142 - 13994285
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| || |||||||    
T  13994142 gacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaatagcatttcgt-ccccaaa 13994240  T
Q  124 aatcatataaaacaagaaattattcaataccata-aaaatttgtc 167  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||||    
T  13994241 aatcatataaaacataaaattattcaatatcatacaaaatttgtc 13994285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 16451245 - 16451097
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  16451245 gcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattt 16451146  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  16451145 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 16451097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 17888066 - 17887906
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  17888066 gcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 17887967  T
Q  113 tgtc-ccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||| ||||||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  17887966 tgtccccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgt 17887906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 30105736 - 30105884
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  30105736 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 30105835  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| | ||| |||||||||    
T  30105836 tgtccctcaaaaatcgtataaaacaaaaaattacttaatgccataaaaa 30105884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 32289400 - 32289547
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  32289400 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtttaaaataccaaaatagcattt 32289499  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    |||||| ||||||| ||||||||||  ||||||||||||  |||||||    
T  32289500 tgtccctcaaaaattatataaaacataaaattattcaatgtcataaaa 32289547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 50304762 - 50304605
Alignment:
Q  20 acaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    |||||||||||||||| |||||||||||||  ||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||||| |    
T  50304762 acaagacaaaaactgatatttttgtccctctgcaaaccacagcacaactttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtcctc 50304663  T
Q  120 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||| |||||    
T  50304662 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgtt 50304605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 51264613 - 51264465
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  51264613 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatagcattt 51264514  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||   ||||||| |||||||||| |||||| ||||| |||||||||    
T  51264513 tgtcctttaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 51264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 38663226 - 38663096
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 38663127  T
Q  137 aagaaattattcaataccataaaaatttgtc 167  Q
    || ||||||||||||  ||||||||||||||    
T  38663126 aaaaaattattcaatgtcataaaaatttgtc 38663096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 42512832 - 42512990
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||| ||||| ||||||||| ||||||||||||||| |||||||| |||||||||| | |||||||| ||||||||||    
T  42512832 gacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaatatcaaaatagaattttgtccc 42512931  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| ||||||||||||   ||||||||||||| ||| |||||    
T  42512932 ccaaaaatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgtt 42512990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 24339694 - 24339864
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaa-ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    |||| ||||| |||||||||| | ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||      
T  24339694 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagttgtctaaaataccaaaatagca-- 24339791  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||| ||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||||| |||||    
T  24339792 ttgtcccccaaacatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgcct 24339864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 39282012 - 39281844
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  39282012 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaataacattt 39281913  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgc 181  Q
     |||| ||||||||| |||||||||  ||||||||||||  |||| ||| |||||||||  ||||||||    
T  39281912 cgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgttatgc 39281844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 41967911 - 41968070
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |    
T  41967911 gacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagccttttgtctc 41968010  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    ||||||||  |||||||||| |||||| ||| |  ||| |||||||||||||||| ||||    
T  41968011 ccaaaaattgtataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgtt 41968070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 41973029 - 41972859
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  41973029 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 41972930  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| | |||||| |||||||||| |||||| | ||| |||| ||||||||||||||| ||||| |||||    
T  41972929 tgtccctc-aaaatcgtataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctgttctgcct 41972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 10384485 - 10384331
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||||| |||||||||||||||||||||||| || |||||||   ||||||| |||||    
T  10384485 gcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaaattatctaaaaattcaaaataacattt 10384386  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||||||||||| | ||||||| |||||    
T  10384385 cgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtc 10384331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 16704844 - 16704682
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||  | |||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||||| |||    
T  16704844 gcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaataccaaaatagctttt 16704745  T
Q  113 tgtcccccaaaaatcatataaaacaagaaa-ttattcaataccataaaaatttgtcatgtact 174  Q
    ||||| ||||||||| |||||||||| ||| ||||| ||| ||||||||||||||| ||||||    
T  16704744 tgtcctccaaaaatcgtataaaacaaaaaatttatttaatgccataaaaatttgtcttgtact 16704682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 38087052 - 38087222
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  38087052 gcaatggacatgacaaaaactcatatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaaatccaaaatagcattt 38087151  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     || ||||||||||   ||||| ||| | |||||||||| ||||||||||||||| ||| ||||| |||||    
T  38087152 cgttccccaaaaattgcataaagcaaaatattattcaatgccataaaaatttgtcctgtgctgttctgcct 38087222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 42705308 - 42705442
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||   |||||||||||||||||||||||||||    
T  42705308 aaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaat 42705407  T
Q  127 catataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||| |||||| ||| | |||||||||    
T  42705408 catataaaacaaaaaattactcattgccataaaaa 42705442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 7184036 - 7183871
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| |||| ||||    
T  7184036 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaatatagtattt 7183937  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||| | |||||||| |||||||||| |||||| ||||| |||| ||||||||||| |||| ||||    
T  7183936 tgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtattgtt 7183871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 1601267 - 1601143
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| || |||||    
T  1601267 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaatcgtacaaaac 1601168  T
Q  137 aagaaattattcaataccataaaaa 161  Q
    || |||||| ||| | |||||||||    
T  1601167 aaaaaattactcattgccataaaaa 1601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 3414914 - 3415058
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||| |||||| || ||||| |||||||||| |||||| ||||| ||||||||||||||||||||    
T  3414914 ggacaggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtcc 3415013  T
Q  118 cccaaaaatcatataaaac-aagaaattattcaataccataaaaa 161  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||    
T  3415014 cccaaaaatcatataaaacaaaaaaattactcaatgccataaaaa 3415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 44738098 - 44738256
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  |||    
T  44738098 gcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatagcaaaatag-tttt 44738196  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    | | || |||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  44738197 tattcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 44738256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 17327710 - 17327853
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | ||||||||||||||||||| |||| |||||||||||||| || |||||| || ||||||| |||||||||  |||||||||    
T  17327710 ggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtcc 17327809  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||| |||||||||| |||||| ||||  |||||||||    
T  17327810 cccaaaaatcgtataaaacaacaaattactcaacgccataaaaa 17327853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 26764851 - 26764970
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  26764851 gcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataatattt 26764950  T
Q  113 tgtcccccaaaaatcatata 132  Q
     ||||| |||||||| ||||    
T  26764951 cgtccctcaaaaatcgtata 26764970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 46155020 - 46154850
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacat-------cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcat 110  Q
    ||||| |||||||||| | |||||||||||||||||||| |||        |||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  46155020 ggacaggacaaaaactcatatttttgtccctcaccaaactacaaactacagcacaactttttgtcccacttacaagttgtctaaaataccaaaataacat 46154921  T
Q  111 tttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatg 180  Q
    |||||||  |||||||| |||||||||| ||||||||||||  ||| ||||||||||||||| | ||||||    
T  46154920 tttgtccttcaaaaatcttataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgccgttatg 46154850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 49303415 - 49303547
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||||| ||||||| | |||||||||| ||||||||||||| ||||| ||||| ||| ||||||||||||||||||| || |||||| |||||||| |    
T  49303415 ggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatactaaaataacattttgt-c 49303513  T
Q  118 cccaaaaatcatataaaacaagaaattattcaat 151  Q
    |||||||||| |||||||||| |||||| |||||    
T  49303514 cccaaaaatcgtataaaacaaaaaattactcaat 49303547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 51703232 - 51703389
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||||||||||||| |||| ||||||||||| || |||||| ||||||||||| | |||    
T  51703232 acaaaaactcatatttttgttcctcaccaa-ccacaacacaactttttgtcccacctacatgttgtctaaaatacaaaaataacattttgtccctc-aaa 51703329  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||  |||||||||| |||||| ||||| |||| |||||||||||||||| |||| |||||    
T  51703330 atggtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgcct 51703389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 5109846 - 5109725
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||   ||||||| |||||    
T  5109846 gcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttgtctaaaa-tgcaaaataacattt 5109748  T
Q  113 tgtcccccaaaaatcatataaaa 135  Q
    ||||||||||||||  |||||||    
T  5109747 tgtcccccaaaaattgtataaaa 5109725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 72 - 183
Target Start/End: Original strand, 20495006 - 20495118
Alignment:
Q  72 tgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatg 170  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||| |||||| |||||  ||| ||||||||||||||    
T  20495006 tgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaatgtcataaaaaatttgtcatg 20495105  T
Q  171 tactgttatgcct 183  Q
    | ||||| |||||    
T  20495106 tgctgttctgcct 20495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 504447 - 504605
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||| ||||||||||||| ||||||| ||||| |||||| | ||||| |||||||||||| || ||||||||||||| |||||| |||| |||    
T  504447 gcaagggacaacacaaaaactgaaaattttgtctctcactaaaccataacacaattttttgtcccacatagaagttgtctaaaataccaaagtagctttt 504546  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||| | ||||||||| || |  || | ||||| | |||||||||||||||||| |||||    
T  504547 tgttcaccaaaaatcgtagaggactaaaaattgtccaataccataaaaatttgacatgt 504605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 34664012 - 34663886
Alignment:
Q  46 cctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaatta 145  Q
    ||||||||||||||| |||||||||||| ||||| || || |||||||||| | ||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  34664012 cctcaccaaaccacaacacaactttttgacccacttataaattgtctaaaatatcaaaataacattttgtcactcaaaaatcatataaaacaaaaaatta 34663913  T
Q  146 ttcaataccat-aaaaatttgtcatgt 171  Q
     | ||| |||| |||||||||||||||    
T  34663912 cttaatgccataaaaaatttgtcatgt 34663886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 570501 - 570353
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacat--cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgt 115  Q
    ||||| || |||||| |||||||||||||||||||||||||||   |||||||||||||| | |||| ||||||||||||| | ||||||| |||||| |    
T  570501 ggacatgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacatttttt 570402  T
Q  116 cccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    || ||||||||  ||||| | || ||| |||||| ||||||||||||||    
T  570401 ccaccaaaaattgtataagataaaaaagtattcagtaccataaaaattt 570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 25343289 - 25343419
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||| |||| |||||| |  ||||||||||||| ||||||||||||||| ||||  ||||||||| |||| ||||| ||||||||  ||||| |    
T  25343289 atttttgtccttcactaaaccatagtacaactttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtccctcaaaaatcgcataaagc 25343388  T
Q  137 aagaaattattcaataccataaaaatttgtc 167  Q
    || ||||||||||||  ||||||||||||||    
T  25343389 aaaaaattattcaatgtcataaaaatttgtc 25343419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 32467883 - 32468025
Alignment:
Q  20 acaagacaaaaactgaaattt-ttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||||||||||| |||||||| || | |||||| ||||||   ||||||||||||||| |||||||||||||||| || | ||||||||  |||||| |     
T  32467883 acaagacaaaaattgaaatttctttttcctcactaaaccaacgcacaactttttgtcctacgtacaagttgtctacaatatcaaaatagttttttgttca 32467982  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    | ||||||||||||| |||| |||||| |||||||||||||||    
T  32467983 caaaaaatcatataagacaaaaaattagtcaataccataaaaa 32468025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 7837251 - 7837143
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| |||| ||||||||| | |||||| ||||||||||||||||||| |||  ||||||||||||||| | |||||||| ||||    
T  7837251 gcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcacagacaagttgtctaaaatatcaaaatagtattt 7837152  T
Q  113 tgtccccca 121  Q
    ||| |||||    
T  7837151 tgtgcccca 7837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 2761612 - 2761769
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||| ||||||||  || ||| | |||||||| |||||||| ||||| |||||||| || |||||| || ||||||| || |||||||  |||    
T  2761612 gcaagggacaaaacaaaaacaaaattttatatccctcactaaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagatttt 2761711  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||  | |||||||||||||||| | |||||||||||||| |||||| | ||||||||    
T  2761712 tgtcaac-aaaaatcatataaaaccaaaaattattcaatactataaaagtctgtcatgt 2761769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 26733668 - 26733579
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    ||||| |||||||||||||||| ||||||| ||| |||||| | |||||||||||| | || ||||||||||||||||| ||||||||||    
T  26733668 ggacatgacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatag 26733579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 46815816 - 46815897
Alignment:
Q  44 tccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaa 125  Q
    |||||||| |||||| |||||||| |||| |||||||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  46815816 tccctcactaaaccatatcacaaccttttttcccacgtactagttgtctaaaataccaaaataacattttgtccgccaaaaa 46815897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 6771481 - 6771382
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||||||||||||| ||||| ||||| ||||| ||| |||| ||||||||||| |||||| ||||||||| |||||| | |||||||  |||||||||    
T  6771481 ggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgactaaaatatcaaaataatattttgtcc 6771382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 39738900 - 39739051
Alignment:
Q  20 acaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    ||||||||||| |||||| |||||||  |||| ||||| || ||||||||||| | | | ||| ||||||||||  | ||||||||  |||||||||| |    
T  39738900 acaagacaaaagctgaaacttttgtcgttcactaaaccgcaacacaactttttattctaagtaaaagttgtctatgataccaaaattacattttgtccac 39738999  T
Q  120 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     ||| ||||| | | |||| ||||| ||||||||||||||||||| ||||||    
T  39739000 taaacatcatttgagacaaaaaattgttcaataccataaaaatttatcatgt 39739051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 52030330 - 52030431
Alignment:
Q  82 acaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgc 181  Q
    ||||||| ||||||| || |||||||  |||||||| | |||||||||||| ||||| |||| |||||||||| ||||| |||| ||||| |||||||||    
T  52030330 acaagttatctaaaatacaaaaatagttttttgtccacaaaaaatcatatataacaaaaaatgattcaataccgtaaaagtttgccatgtgctgttatgc 52030429  T
Q  182 ct 183  Q
    ||    
T  52030430 ct 52030431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 23799604 - 23799670
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgt 90  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| || |||||  |||||||    
T  23799604 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttatcgcacgtttaagttgt 23799670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 40610818 - 40610684
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaa 134  Q
    ||||| || ||||||| ||||||||| ||||||||||| || ||  || ||||||||||||| ||||||||| |||||||    || |||||  ||||||    
T  40610818 aaattcttctccctcatcaaaccacaacacaactttttatcacatatataagttgtctaaaataccaaaataacattttgcatacccaaaattctataaa 40610719  T
Q  135 acaagaaattattcaataccataaaaatttgtcat 169  Q
    |  | || |||||||||||||||||||||| ||||    
T  40610718 aacaaaagttattcaataccataaaaatttatcat 40610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 16643272 - 16643361
Alignment:
Q  47 ctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaa 138  Q
    ||||||||| |||  |||||||||||||||||| |||| ||||||||||| || |||||| ||||| ||||||  |||||| ||||||||||    
T  16643272 ctcaccaaatcacgacacaactttttgtcccacatacaggttgtctaaaatacaaaaataccatttcgtcccc--aaaatcgtataaaacaa 16643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 39792914 - 39792842
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    |||||||| ||||||| |||||| ||||||||||||| |||||||| ||||  ||||||||| ||||||||||    
T  39792914 gacaaaaattgaaattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaa 39792842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 46447771 - 46447639
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| |||||||| | ||||   |||  ||||||||||||||||| ||||||||||||| ||||||| | ||||||||  ||||||||  ||||    
T  46447771 gacaaaaactaaaatttttattcctccttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtccatcaaa 46447672  T
Q  124 aatcatataaaacaagaaattattcaataccat 156  Q
    |||| ||  |  | || ||||||||||||||||    
T  46447671 aatcgtactaggccagcaattattcaataccat 46447639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 21763170 - 21763252
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 106  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||  || |  ||| | |||||||||| |||||||||    
T  21763170 gacaaaagctgaaattcttgtccctcaccaaactacatcacaactttttagccaaaatacgaattgtctaaaataccaaaata 21763252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 20986333 - 20986445
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaata 152  Q
    |||||| | ||||||||||||||||||| | ||||||| || || |  ||||||| |||||||||  |||||||||| ||| || | || ||||||||||    
T  20986333 aaaccataacacaactttttgtcccacgaataagttgtttacaatagaaaaatagtattttgtccaacaaaaatcatgtaagaccaaaatttattcaata 20986432  T
Q  153 ccataaaaatttg 165  Q
    ||| |||| ||||    
T  20986433 ccacaaaattttg 20986445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 32215291 - 32215398
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||| ||||||| |||||  | || ||||| || || || ||||||||| | |||||||||| |||||||||||||||||  |||| ||| ||||||    
T  32215291 acaaaaattgaaattcttgtcatttactaaaccgcaacataattttttgtcctaagtacaagttgactaaaacaccaaaatagtgttttctccaccaaaa 32215390  T
Q  125 atcatata 132  Q
    ||| ||||    
T  32215391 atcgtata 32215398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 34283883 - 34284028
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagt--tgtctaaaacaccaaaatagcattttgtccccca 121  Q
    |||||||| ||||||| |||||  |||  |||||||| ||||||||||| || |||||||||||  | | ||||| | ||||||||  ||||||||   |    
T  34283883 gacaaaaattgaaattattgtctttcaataaaccacaacacaactttttatctcacgtacaagttatatataaaatatcaaaatagtcttttgtccataa 34283982  T
Q  122 aaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||| || ||  ||| || |||||||||||||||||| ||||||    
T  34283983 aaaatcgtacaaggcaaaaacttattcaataccataaaagtttgtc 34284028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 7836630 - 7836573
Alignment:
Q  101 aaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataa 158  Q
    |||| |||||||||| |||||||| || |||||||||| ||||||||||||| |||||    
T  7836630 aaaaaagcattttgtgccccaaaactcgtataaaacaaaaaattattcaatatcataa 7836573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 17291690 - 17291622
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagtt 88  Q
    |||| |||||||||  ||||||||||||| ||| |||||||| || ||||||||||||| ||||||||||    
T  17291690 gacaggacaaaaacataaatttttgtccc-cactaaaccacaacaaaactttttgtccctcgtacaagtt 17291622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 8838987 - 8838898
Alignment:
Q  87 ttgtctaaaacaccaaaatagcattttgtcccccaaaaatcata----taaaac-aagaaattattcaataccataaaaatttgtcatgt 171  Q
    |||||||||| | |||||| |||||| |||||||||||||||||    |||||| || |||||||||||| | |||||||||||| ||||    
T  8838987 ttgtctaaaatatcaaaatggcatttcgtcccccaaaaatcatataattaaaacaaaaaaattattcaatgctataaaaatttgttatgt 8838898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 30798824 - 30798900
Alignment:
Q  90 tctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    ||||||| ||||||||||  | |||||| ||||||||| ||||| || | ||||||||||||| ||||||| |||||    
T  30798824 tctaaaataccaaaatagtttgttgtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaattttgt 30798900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 21071726 - 21071672
Alignment:
Q  129 tataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||| ||||||||||||   |||||||||||||||||| |||| |||||    
T  21071726 tataaaacaaaaaattattcaatgtaataaaaatttgtcatgtattgttctgcct 21071672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 7837487 - 7837430
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtc 75  Q
    ||||| |||||||| |||| ||||||||| | | |||| |||||||||||||||||||    
T  7837487 ggacatgacaaaaattgaattttttgtccattatcaaatcacatcacaactttttgtc 7837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 30105104 - 30105007
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgt 115  Q
    ||||| ||||||| || ||||| ||||  ||||| |||||||| |  || ||||| ||| |  |||||||||||||||| ||||||||| ||||||||    
T  30105104 ggacatgacaaaacctaaaattcttgtttctcactaaaccacaacgtaaatttttatccaaattacaagttgtctaaaataccaaaataacattttgt 30105007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 31574461 - 31574320
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt-gtcccccaa 122  Q
    |||||||||| |||||| | || ||||| ||  |||| | |||||| |||||| |  |||||||||| ||||| || |||||||  |||| |||  | ||    
T  31574461 gacaaaaactaaaatttgtatctctcactaattcacaacgcaacttattgtcctatatacaagttgtttaaaatacaaaaatagttttttagtctacaaa 31574362  T
Q  123 aaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||  ||||||||| ||||||||||||| || ||||||||    
T  31574361 aaatcgcataaaacaaaaaattattcaatatcacaaaaattt 31574320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 33316491 - 33316367
Alignment:
Q  57 cacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat 156  Q
    |||| ||||||||||| |  |||||||||||||||||||  || ||||||||||||| ||| | |||| || |||||  | |  |||||||||||||| |    
T  33316491 cacaacacaactttttcttacacgtacaagttgtctaaattacaaaaatagcatttt-tccacaaaaagtcgtataaggccaagaattattcaataccgt 33316393  T
Q  157 aaaaatttgtcatgtactgttatgcc 182  Q
    ||||  ||||| |||  |||||||||    
T  33316392 aaaatgttgtcttgtgttgttatgcc 33316367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 3560205 - 3560265
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt 72  Q
    ||||| |||||| ||||||| | ||| |||||||||| || |||||||| |||||||||||    
T  3560205 agcaatggacaaaacaaaaatttaaagttttgtcccttactaaaccacaacacaacttttt 3560265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 30798662 - 30798706
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaacttttt 72  Q
    |||||||||| | ||||||||||| || |||||||||||||||||    
T  30798662 aaaactgaaagtcttgtccctcactaacccacatcacaacttttt 30798706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 1e-70; HSPs: 98)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 3649748 - 3649578
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3649748 gcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacattt 3649649  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  3649648 cgtcccccaaaaaacatataaaacaagaaattattcaataccataaaaatttgtgatgtgctgttatgcct 3649578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 26083451 - 26083280
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaaca-ccaaaatagcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  26083451 gcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtctaaaacacccaaaataacatt 26083352  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  26083351 tcgtcccccaaaaagcatataaaacatgaaattattcaataccataaaaatttgtcgtgtactgttatgcct 26083280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 39078762 - 39078603
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||    
T  39078762 gacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtcccccaaa 39078663  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||  ||||||||||    
T  39078662 aatcatataaaataagaaattattcaataccataaaaatttatcctgtgttgttatgcct 39078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 44324327 - 44324486
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  44324327 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgttttaaataccaaaatagcatttcgtcccccaaa 44324426  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||    
T  44324427 aatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgcct 44324486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 56154721 - 56154562
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  56154721 acaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaa 56154622  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||| |||||| ||||| |||| ||||||||||||||||||||| |||||    
T  56154621 atcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgcct 56154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 20802511 - 20802653
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20802511 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 20802610  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
     ||||||||||||||||||| |||||| ||||| |||||||||    
T  20802611 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaa 20802653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 22318364 - 22318525
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||      
T  22318364 gacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtcat 22318463  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatg 180  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  22318464 ccaaaaatcatataaaacaagaaattattcaatatcataaaaatttgtcatgtgttgttatg 22318525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 23521981 - 23521821
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23521981 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 23521882  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  23521881 aatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 23521821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 33552816 - 33552964
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33552816 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 33552915  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  33552916 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 33552964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 53200628 - 53200788
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttt-tgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaa 122  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||||| |||    
T  53200628 gacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaacatcaaaatagtatttcgtccctcaa 53200727  T
Q  123 aaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||| ||||||| |||||||||||||||||||||||||||  |||  ||||||||||    
T  53200728 aaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgttatgcct 53200788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 29785523 - 29785682
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  29785523 acaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaa 29785622  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||| |||||||||| |||||||||||| |||| ||||||||||||||| ||||| |||||    
T  29785623 atcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgcct 29785682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 37695521 - 37695679
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||| ||||| |||||    
T  37695521 gacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatcaaaataacatttcgtccc 37695620  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||| ||| |||||    
T  37695621 ccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcttgtgctgtt 37695679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 47642471 - 47642629
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  47642471 gacaagataaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccc 47642570  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||||| || ||| |||||    
T  47642571 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttatcctgtgctgtt 47642629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 55065307 - 55065477
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  55065307 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 55065406  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||  |||||||| |||||||||| |||||| ||||| ||||||||||||||| ||| ||||| |||||    
T  55065407 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtgctgttctgcct 55065477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 43641205 - 43641060
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43641205 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 43641106  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
     |||||||| |||||||||| |||||| ||||| ||||||||||||    
T  43641105 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattt 43641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 9512325 - 9512473
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  9512325 gacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 9512424  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||||||||||||||| |||||| ||||| |||| |||||||||||||||    
T  9512425 aatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 9512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 52949826 - 52949679
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  52949826 gacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccc 52949727  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  52949726 ccaaaaatcgtataaaacaa-aaattattcaatgtcataaaaatttgtc 52949679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 20694483 - 20694324
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  20694483 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcattt 20694384  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgt 171  Q
    |||||||||||||| ||||||||||| |||||| ||| | ||||| ||||||||||||||    
T  20694383 tgtcccccaaaaattatataaaacaaaaaattactcattgccatacaaaatttgtcatgt 20694324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 50727887 - 50728035
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  50727887 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 50727986  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  50727987 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaa 50728035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 50735901 - 50736049
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  50735901 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 50736000  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  50736001 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaa 50736049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 2725107 - 2725277
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  2725107 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcc-acgtacaagttgtctaaaataccaaaatagcattt 2725205  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| |||||  ||| ||||||||||| ||| ||||| |||||    
T  2725206 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgcct 2725277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 44649144 - 44649294
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  44649144 gacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtccc 44649243  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||||| |||||||||  ||||||||||||  ||| ||||||||||||||    
T  44649244 ccaaaaatcgtataaaaca--aaattattcaatgtcatcaaaatttgtcatgt 44649294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 50178472 - 50178621
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttt-tgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||| |||||||||||| |||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  50178472 gacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcc 50178571  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  50178572 cccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 50178621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 21580138 - 21579990
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |    
T  21580138 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcatgt 21580039  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||| | |||||| |||||||||||||||    
T  21580038 tgtccctcaaaaatcgtataaaactaaaaattactcaataccataaaaa 21579990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 24002451 - 24002279
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-tt 111  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  24002451 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 24002352  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaatacc-ataaaaatttgtcatgtactgttatgcct 183  Q
    ||||||| |||||||| |||||||||| |||||| ||||| || | ||||||||||| ||| ||||| |||||    
T  24002351 ttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccaaaaaaaatttgtcctgtgctgttctgcct 24002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 24210431 - 24210271
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-tt 111  Q
    |||| ||||| |||||||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||    
T  24210431 gcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattt 24210332  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa-atttgtcatgt 171  Q
    ||||||| |||||||| |||||||||| |||||| |||||||||||||| |||||||||||    
T  24210331 ttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgt 24210271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 32181375 - 32181211
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32181375 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 32181276  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     |||||||||||||  |||||||||  ||||||||||||  |||| ||||||||| ||| |||||    
T  32181275 cgtcccccaaaaatagtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgtt 32181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 33177006 - 33177153
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  33177006 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaataccaaaataacattt 33177105  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||||||||| |||||||||  |||||| ||||| ||||||||    
T  33177106 tgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaa 33177153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 36743662 - 36743833
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| | | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36743662 gcaagggacatgacaaaaattcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 36743761  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||  |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  36743762 tgtccctcaaaaattgtataaaacaacaaattactcaatgccataaaaaatttgtcttgtgctgttctgcct 36743833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 9807267 - 9807098
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| || ||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9807267 gcaatggacaggacaaaaactcaactttttgtcc-tcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaatagcattt 9807169  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||| ||||||||| |||||||||  |||||||||||| ||||| ||||||||| ||| |||||||||||    
T  9807168 cgtcctccaaaaatcgtataaaacataaaattattcaatgccatacaaatttgtcctgtgctgttatgcct 9807098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 37865859 - 37865717
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  37865859 gacatgacaaaaactcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtccc 37865760  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
     || ||||| |||||||||| |||||||||||| |||||||||    
T  37865759 tcagaaatcgtataaaacaaaaaattattcaatgccataaaaa 37865717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 41711959 - 41711806
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  41711959 gcaagggacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaatagcattt 41711860  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
     |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||    
T  41711859 cgtcccccaaatatcgtataaaacaaaaaattattcaatagcataaaaatttgt 41711806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 46680484 - 46680649
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  46680484 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccataatagcattt 46680583  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    ||||||  |||||||||||||||||| |||||| ||||| |||| ||||||||||| |||||||||    
T  46680584 tgtccctaaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgtt 46680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 38812632 - 38812500
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38812632 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 38812533  T
Q  113 tgtcccccaaaaatcatataaaacaagaaatta 145  Q
    ||| || |||||||| |||||||||| ||||||    
T  38812532 tgttccgcaaaaatcgtataaaacaaaaaatta 38812500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 55593997 - 55593849
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  55593997 gcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaataacattt 55593898  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  55593897 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 55593849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 6776690 - 6776519
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  6776690 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattt 6776591  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| |  ||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  6776590 tgtctctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 6776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 21202845 - 21202687
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||    
T  21202845 gacaggacaaaaactcataattttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgt-cc 21202747  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| |||||| ||| | |||| ||||||||||||||| |||||    
T  21202746 ccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgtt 21202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 49152074 - 49152244
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  49152074 gcaagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaa-accaaaataacattt 49152172  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||  |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  49152173 tgtccatcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 49152244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 29593007 - 29592837
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||| | |||| |||||||| |||||||||||||||||| || |||||||||||||  ||||||| ||||||    
T  29593007 gcaagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttgtctaaaaatccaaaatggcattt 29592908  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||| ||||| |||||    
T  29592907 cgtcccccaaaaatcatataaaacaaaaaattattcaatgccaaaaaaatttgtcttgttctgttctgcct 29592837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 30942886 - 30942744
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    |||||||||||||| |||| |||||||||||||| |||||| ||||| | ||| || ||||||||||||||||||||||| |||||  ||||||||||||    
T  30942886 aaaaactgaaatttctgtctctcaccaaaccacaacacaacattttgcctcacatataagttgtctaaaacaccaaaatatcatttcatcccccaaaaat 30942787  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  30942786 catataaaacaagaaattattcaatgctataaaaatttgtcat 30942744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 12600993 - 12600833
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  12600993 ggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 12600894  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |  ||||||| | |||||||| ||| || ||||| |||| |||||||||||| || |||||    
T  12600893 ctaaaaaatcgtttaaaacaaaaaactactcaatgccataaaaaatttgtcaagtgctgtt 12600833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 34930027 - 34929856
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||| ||||||||||||||| |||||||||||| ||||  |||||||||||||||| | |||||||||||||    
T  34930027 gcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtctaaaatatcaaaatagcattt 34929928  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa-tttgtcatgtactgttatgcct 183  Q
    ||||||||||||||| |||||||||| || ||| | ||| ||||||||| |||||||||| ||||| |||||    
T  34929927 tgtcccccaaaaatcgtataaaacaaaaatttactgaatgccataaaaattttgtcatgtgctgttctgcct 34929856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 38486231 - 38486402
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| | |||||||||||||    
T  38486231 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattt 38486330  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||  |||||||||| |||||| ||||  |||| ||||||||||| ||| ||||| |||||    
T  38486331 tgtccctcaaaaatagtataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgctgttctgcct 38486402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 20518002 - 20518167
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||| | | ||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  20518002 gacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 20518101  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
     |||||||  |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  20518102 tcaaaaattctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 20518167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 36886044 - 36885895
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| ||| |||||||||||    
T  36886044 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatacctaaatagcattt 36885945  T
Q  113 tgtcccccaaaaatcatataaaacaagaaatt-attcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| ||||| | ||||| |||||||||    
T  36885944 tgtccctcaaaaatcgtataaaacaaaaaattaactcaatgccataaaaa 36885895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 54543101 - 54542937
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  54543101 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaactttt-gtcccacgtacaagttgtctaaaataccaaaatatcattt 54543003  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| |||||  ||| ||||||||||| ||| |||||    
T  54543002 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgacataaaaaatttgtcttgtgctgtt 54542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 4325903 - 4325755
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||||| | ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4325903 gcaagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 4325804  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||||||  ||||||||| |||||| ||| | |||||||||    
T  4325803 tgtcccccaaaaatcgcataaaacaaaaaattactcattgccataaaaa 4325755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 11056154 - 11055990
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||| |||||  ||||| |||| ||||||||| |||||    
T  11056154 gcaagggacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtacagattgtcaaaaataccaaaataacattt 11056055  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     || || |||||||| |||||||||| |||||||||||| ||||||| |||||||  ||||||||    
T  11056054 cgtgcctcaaaaatcgtataaaacaaaaaattattcaatgccataaagatttgtcccgtactgtt 11055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 16320631 - 16320479
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| || ||||||| ||||    
T  16320631 gcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaattt 16320532  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
      |||||||||| || |||||||||  |||||||||||| |||||||||||||||    
T  16320531 catcccccaaaactcgtataaaaca--aaattattcaatgccataaaaatttgtc 16320479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 2787076 - 2786922
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| |||| |||||||||||||| |||||||||||||||||| || |||||||  |||||||| |||||    
T  2787076 gcaagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaaatccaaaataacattt 2786977  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||||||||||| | ||||||| |||||    
T  2786976 cgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtc 2786922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 37932020 - 37931862
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||||   ||||||||||||| |||||||||||    
T  37932020 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaa 37931921  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    ||  |||||||| | |||||||||||| ||||||||| ||||| ||| ||||| |||||    
T  37931920 attgtataaaacgaaaaattattcaatgccataaaaagttgtcttgtgctgttctgcct 37931862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 36497323 - 36497191
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||| ||||||    
T  36497323 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtccc 36497224  T
Q  119 ccaaaaatcatataaaacaagaaattattcaat 151  Q
     |||||||| ||||||| || |||||| |||||    
T  36497223 tcaaaaatcgtataaaataaaaaattactcaat 36497191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 50186626 - 50186486
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||||||| |  ||||||||||    
T  50186626 aaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatacaaaaatagcatttcgcaccccaaaaat 50186527  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | ||||||| || ||||||||||||  ||||||||||||||    
T  50186526 cgtataaaataaaaaattattcaatgtcataaaaatttgtc 50186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 1231412 - 1231298
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  1231412 gacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaa 1231313  T
Q  124 aatcatataaaacaa 138  Q
    |||| ||||||||||    
T  1231312 aatcgtataaaacaa 1231298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 7554955 - 7555085
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||||||  |||||||||||||| | || ||||||||| ||||||||    
T  7554955 atttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcggcctccaaaaatcgtataaaac 7555054  T
Q  137 aagaaattattcaataccataaaaatttgtc 167  Q
    || |||||||||||| |||||||||||||||    
T  7555055 aaaaaattattcaatgccataaaaatttgtc 7555085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 52319435 - 52319290
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||| |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||| |||||    
T  52319435 gcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatgtcaaaataacattt 52319336  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| ||||||||   |||||| ||||| |||||||||    
T  52319335 tgtccctcaaaaatcgtataaaac---aaattactcaatgccataaaaa 52319290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 177
Target Start/End: Complemental strand, 23328020 - 23327864
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt-gtcccacgtacaagttgtctaaaacaccaaaatagcattttgt-ccccca 121  Q
    |||||||||| | |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||| | ||||||    
T  23328020 gacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccca 23327921  T
Q  122 aaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||||| |||||| ||| | |||| ||||||||||| |||| ||||    
T  23327920 aaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtaatgtt 23327864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 37 - 183
Target Start/End: Original strand, 47361411 - 47361554
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||||||||||||||||| ||||||||||||||| ||    ||||||||||||| |||||||||||||||||||||  |||| || ||||||||    
T  47361411 atttttgtccctcaccaaaccacaacacaactttttgtccaac----aagttgtctaaaataccaaaatagcattttgtccctaaaaattcgtataaaac 47361506  T
Q  137 aagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    || |||||| |||||| ||| ||||||||||||||| ||||| |||||    
T  47361507 aaaaaattactcaatatcataaaaaatttgtcatgtgctgttctgcct 47361554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 42870077 - 42869937
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-ttttgtcc 117  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||   |||||||||||| ||||||||||||| || ||||||||| ||||||||    
T  42870077 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaac---ttgtcccacgtataagttgtctaaaatacaaaaatagcatttttgtcc 42869981  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    | |||||||| |||||||||| |||||| ||||| |||||||||    
T  42869980 ctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 42869937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 43739568 - 43739415
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |  |||||| |||||| |||    
T  43739568 ggacatgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatcc 43739469  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     | ||||||  ||||| || | |||||||| ||||||| |||||||| ||||||    
T  43739468 acaaaaaattgtataagaccaaaaattatttaataccaaaaaaatttatcatgt 43739415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 50729516 - 50729621
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  50729516 gcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 50729615  T
Q  113 tgtccc 118  Q
     |||||    
T  50729616 cgtccc 50729621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 29616277 - 29616123
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| ||||     || |||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  29616277 gcaagggacaggacaaaaactcatatttttgtccctgacca-----cagcacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattt 29616183  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||||||  ||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  29616182 tgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 29616123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 13110439 - 13110287
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaa-ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    |||||||||| ||||||| || | |||||||||| |||| ||| ||||| ||||||| ||||||||||||| || ||||||||||  |||||||||||||    
T  13110439 gcaaaggacatgacaaaa-ctcatatttttgtccttcactaaaaccacaacacaactgtttgtcccacgtaaaatttgtctaaaaatccaaaatagcatt 13110341  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    | ||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||    
T  13110340 tcgtcccccaaaaatcatacaaaacaa-aaattatgcaatgccataaaaatttgt 13110287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 28115364 - 28115258
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  28115364 gcaagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattt 28115265  T
Q  113 tgtcccc 119  Q
     ||||||    
T  28115264 cgtcccc 28115258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 7001952 - 7001802
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||| | | ||| ||||||||| ||| ||||||||| || ||||||| ||||||    
T  7001952 acaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtct-aaataccaaaataaca-tttgtccaccaaaa 7001855  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||| ||||| || | |||||||||||| ||||||||||||||| |||| ||||    
T  7001854 atcgtataagaccaaaaattattcaatgccataaaaatttgtcctgtattgtt 7001802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 14296654 - 14296544
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgt 166  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||| |||||| ||||| |||| ||||||||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgt 14296555  T
Q  167 catgtactgtt 177  Q
    | ||| |||||    
T  14296554 cctgtgctgtt 14296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 14314902 - 14314792
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgt 166  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||| |||||| ||||| |||| ||||||||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgt 14314803  T
Q  167 catgtactgtt 177  Q
    | ||| |||||    
T  14314802 cctgtgctgtt 14314792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 2629925 - 2630018
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 106  Q
    |||||||||| |||||||||| | ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  2629925 gcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 45577680 - 45577822
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||| ||||||| |||| |||| | |||||||| |||||||||||||||||||| |||||||||||||| ||||||||  |||||||||| | ||||||    
T  45577680 aaaaaatgaaattcttgttcctcgctaaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaat 45577779  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
        ||| |||  ||||||||||||||||||||| ||||||||||    
T  45577780 tgattaagaca--aaattattcaataccataaaactttgtcatgt 45577822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 42772818 - 42772724
Alignment:
Q  65 aactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaa 159  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| |||||| ||| |||||||||||||||||||| |||||| ||||| |||||||    
T  42772818 aactttttgtcccacgtataagttatctaaaataccaaaataacattttttcctccaaaaatcatataaaacaaaaaattactcaatgccataaa 42772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 25978596 - 25978664
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct 92  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  25978596 gacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 9948035 - 9947894
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| ||||| || |||||||| ||||||||| ||||||||||||| |||||||||||| |  |||| ||||||||||   |||||||     
T  9948035 gacatgacaaaaactaaaattcttatccctcactaaaccacattacaactttttgtctcacgtacaagttattcaaaataccaaaatagtcctttgtcca 9947936  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    | ||||| |||||||||| | || ||||| |||| |||||||    
T  9947935 caaaaaaccatataaaaccaaaatttatttaatatcataaaa 9947894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 167
Target Start/End: Complemental strand, 43893667 - 43893535
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaa 134  Q
    |||| ||||||| |||| |||||||| ||||| |||||||| ||||| || ||| ||||||| || |||||||  |||||||| |||||||| |||||||    
T  43893667 aaatatttgtccttcactaaaccacaacacaattttttgtctcacgtgcaggttatctaaaatacaaaaatagttttttgtccaccaaaaattatataaa 43893568  T
Q  135 acaagaaattattcaataccataaaaatttgtc 167  Q
    |||| |||  | ||||||||||||||| |||||    
T  43893567 acaaaaaaaaaatcaataccataaaaagttgtc 43893535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 56487281 - 56487374
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||| | |||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||| |||| | |||||  ||||||||    
T  56487281 tttttgtcacgcgtacaagttgtttaaaataccaaaataacattttgtcctccaaaaatcatataaaacaaaaaatcaatcaatgacataaaaa 56487374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 10587141 - 10587009
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||||||||| |||||| |||  ||||||||||| || | ||||||||||||| ||||| |        |||||||| |||||| |||     
T  10587141 gacaagacaaaaactgaaattattgtccttcattaaaccacatcataattatttgtcccacgtataagttat--------ccaaaataacattttatcca 10587050  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    | |||||||||||||||||| ||||||||| |||||||||||    
T  10587049 caaaaaatcatataaaacaaaaaattattc-ataccataaaa 10587009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 52755625 - 52755478
Alignment:
Q  20 acaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||  |||||||||||| ||| | ||||| ||| ||||  | ||||||| |||||| |||      
T  52755625 acaagacgaaaactaaaattcttgtccctcaccaaagcacaaaacaactttttgttccaagcacaagctgtgtaaattagcaaaataacattttttccat 52755526  T
Q  120 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||| ||  |||||||||| ||||| ||||| ||||||| ||||||||    
T  52755525 caaacattgtataaaacaaaaaattgttcaacaccataacaatttgtc 52755478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 42772894 - 42772832
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgt 81  Q
    ||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||    
T  42772894 gacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 52673918 - 52673810
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||| |||||||||||||||||| ||||| || ||||| |||||||| ||||||  |||| ||||||| || ||||||   ||||||||    
T  52673918 ggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaataaatttttgtcc 52673819  T
Q  118 cccaaaaat 126  Q
     ||||||||    
T  52673818 accaaaaat 52673810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 38520584 - 38520518
Alignment:
Q  40 tttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 106  Q
    ||||||||||||||||||||| || || ||||||||||||| ||||||||| ||||| |||||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaataccaaaata 38520518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 43189737 - 43189894
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||  || |||||||  ||||| |||||||  ||||| |||||||||||  | |||||| ||||||  || |||||| | | |    
T  43189737 gcaagggacaagacaaaaacataattttttgtgtctcactaaaccacgacacaagtttttgtcccaaatgcaagttatctaaat-acaaaaataacttat 43189835  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||| | ||| ||| ||||| |||| ||||||||||||||||||||| ||| ||||||    
T  43189836 tgtccactaaatatcgtataagacaaaaaattattcaataccataaaagtttatcatgt 43189894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 44355839 - 44355981
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaa-ctttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaa 122  Q
    |||||||| ||||||||||||||||||  |||||||| |||||  ||||||||  ||||||||||||| | | | ||||||||||  ||||||||  |||    
T  44355839 gacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttttgtcttacgtacaagttgtatgatataccaaaatagtcttttgtccatcaa 44355938  T
Q  123 aaatcatataaaacaagaaattattcaataccataaaaatttg 165  Q
    ||||| || || || | || |||||||||| ||||||| ||||    
T  44355939 aaatcgtacaagaccaaaagttattcaatagcataaaagtttg 44355981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 20644237 - 20644382
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaa 134  Q
    ||||||||||| ||||| |||||||||| || ||| ||||| |  ||||||||| ||||| | || |||||||  |||||| | ||||||||| ||||||    
T  20644237 aaatttttgtctctcactaaaccacatcccagcttcttgtctcgtgtacaagttatctaagatacaaaaatagatttttgtacaccaaaaatcgtataaa 20644336  T
Q  135 acaagaaattattcaataccataaaaatttgtcatgtactgttatg 180  Q
    |  | |||||||||||| | |||||| | ||||||||  |||||||    
T  20644337 atcaaaaattattcaatgcgataaaagtgtgtcatgtgttgttatg 20644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 21098635 - 21098546
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt 113  Q
    |||||||| ||||||| ||||| ||||| |||||||| || ||||||||||| |||||| || |||||||||| || |||||| ||||||    
T  21098635 gacaaaaattgaaattcttgtctctcactaaaccacaacataactttttgtcgcacgtaaaatttgtctaaaatactaaaataacatttt 21098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 985327 - 985241
Alignment:
Q  80 gtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||||| ||||| | ||||||||  ||||||||  |||||||||||||| || | ||||||||||| ||||||||||||||||    
T  985327 gtacaagttgtttaaaatatcaaaatagtcttttgtccagcaaaaatcatataagaccaaaaattattcaa-accataaaaatttgtc 985241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 31445878 - 31446007
Alignment:
Q  40 tttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaag 139  Q
    |||||||| ||| |||| |||||||||||||||| | ||||||||| || ||||||| || |||||| | |||||| | | ||||||| || || | ||     
T  31445878 tttgtccc-cactaaacaacatcacaactttttgccacacgtacaaattatctaaaatacaaaaataactttttgttcacaaaaaatcgtacaagataa- 31445975  T
Q  140 aaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||| ||||||||||||| ||||||||||    
T  31445976 aaattatccaataccataaaagtttgtcatgt 31446007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 40792486 - 40792409
Alignment:
Q  56 ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataa 133  Q
    |||||||||||||||||||  || ||||||||| ||||||| || |||||||| ||||||||  |||||||| |||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtccatcaaaaatcgtataa 40792409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 3579201 - 3579089
Alignment:
Q  48 tcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttg-tcccccaaaaatcatataaaacaagaaattat 146  Q
    |||| |||||| ||||||||||||||||| || | |||||||||||||| ||||||||||  ||||| || |  ||||| | |||||||  | |||||||    
T  3579201 tcactaaaccatatcacaactttttgtccaacattcaagttgtctaaaataccaaaatagtcttttgttcgcaaaaaaaccttataaaaacaaaaattat 3579102  T
Q  147 tcaataccataaa 159  Q
    |||||| ||||||    
T  3579101 tcaatatcataaa 3579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 7381378 - 7381238
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||||| ||||| |||  | |  |||||| | ||||||||||| || | ||||||| || ||||||| || |||||||  |||||||| |||||    
T  7381378 gacaaaaactgatattttagtctttgattaaaccataacacaactttttttcacgcgtacaaattatctaaaatacaaaaatagttttttgtccaccaaa 7381279  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | |||||||| | ||  ||||||||||||||||| |||||||||    
T  7381278 a-tcatataagaaaa--aattattcaataccatacaaatttgtc 7381238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 9435471 - 9435356
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtac-aagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaat 151  Q
    ||||||||||||||||||||| || |  ||| ||||| ||||||| || |||||||| |||||||  ||||||||  ||||| || | |||| |||||||    
T  9435471 aaaccacatcacaactttttgaccaatatacaaagttatctaaaatacaaaaatagctttttgtctaccaaaaatggtataagaccaaaaataattcaat 9435372  T
Q  152 accataaaaatttgtc 167  Q
    | ||||||| ||||||    
T  9435371 atcataaaagtttgtc 9435356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 41897334 - 41897477
Alignment:
Q  15 aaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttg 114  Q
    |||||||| |||||||||  |||||| ||||||||   |||| ||| ||||||||||| ||| ||||| ||||| | ||||| || |||||||  ||||     
T  41897334 aaaggacaggacaaaaacaaaaatttgtgtccctcgataaacaacagcacaactttttatcctacgtaaaagttatataaaatacaaaaatagtttttta 41897433  T
Q  115 tcccccaaaaatcatataaaacaagaaattattcaataccataa 158  Q
    ||| | ||||||  |||| ||  | |||||||||||||||||||    
T  41897434 tccacaaaaaattgtatacaatcaaaaattattcaataccataa 41897477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 41720903 - 41720797
Alignment:
Q  65 aactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    ||||||||||||||||||||| || ||||||| || ||||||   |||||||| | ||||||  ||||| || | ||||||| ||||| ||| ||| |||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaataattttttgtccacaaaaaatagtataagactaaaaattatacaatatcattaaagttt 41720804  T
Q  165 gtcatgt 171  Q
    |||||||    
T  41720803 gtcatgt 41720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 10184875 - 10184927
Alignment:
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||| ||||| ||||||||||||||| |||||||||| |||||    
T  10184875 atcatataagacaaaaaattgttcaataccataaaagtttgtcatgtgctgtt 10184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 32858319 - 32858277
Alignment:
Q  129 tataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  32858319 tataaaacaaaaaattattcaatactataaaaatttggcatgt 32858277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 37859244 - 37859326
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 106  Q
    |||||||||| ||| |||| || ||||  |||||| | |||||||||||||| ||  ||||| ||||||||||||| ||||||    
T  37859244 gacaaaaactaaaaattttatctctcaataaaccataacacaactttttgtctcaaatacaacttgtctaaaacactaaaata 37859326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 53343560 - 53343610
Alignment:
Q  122 aaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||||||||    
T  53343560 aaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgt 53343610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 6973893 - 6973946
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt 72  Q
    |||| |||||||||| | | ||||||||||| |||||||||| |||||||||||    
T  6973893 gacaggacaaaaactcataattttgtccctcgccaaaccacaacacaacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 7475080 - 7475173
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||||| |||||||| |||| ||||   ||||||  |||||||||||||||| | ||||| |  |||||||| || ||||| |||||||||||    
T  7475080 gacaaaagctgaaattcttgttcctcgttaaaccatgtcacaactttttgtccaaagtacatgccgtctaaaatactaaaattgcattttgtcc 7475173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 25978672 - 25978705
Alignment:
Q  141 aattattcaataccataaaaatttgtcatgtact 174  Q
    |||||||||||| |||||||||||||||||||||    
T  25978672 aattattcaatatcataaaaatttgtcatgtact 25978705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 2e-69; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 3867630 - 3867794
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3867630 gacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtccc 3867729  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  3867730 ccaaaaatcatataaaacaagaaattattcaataccataaaaacttgtcatgtgttgttatgcct 3867794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 51925183 - 51925353
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |  || ||||||||| |||||    
T  51925183 gcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttttaataccaaaataacattt 51925282  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||    
T  51925283 cgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgcct 51925353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 3864650 - 3864818
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3864650 gcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 3864749  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgc 181  Q
    ||| |||||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||| |||||||||    
T  3864750 tgt-ccccaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttatgc 3864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 34026777 - 34026606
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  34026777 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 34026678  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||||||||| |||||||||| ||| ||||| |||||    
T  34026677 tgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgcct 34026606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 3964387 - 3964228
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||    
T  3964387 gacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcatttcgt-ccccaaa 3964289  T
Q  124 aatcatataaaacaagaaattattcaataccata-aaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||  ||||||||||||| |||| |||||||||| ||| ||||| |||||    
T  3964288 aatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgctgttctgcct 3964228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 31883003 - 31883151
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  31883003 gacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccc 31883102  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  31883103 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 31883151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 33364759 - 33364907
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  33364759 gacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatagcattttgtccc 33364858  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  33364859 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 33364907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 12349146 - 12349317
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  12349146 gcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttgtctaaaataccaaaatagcattt 12349245  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  12349246 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 12349317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 24571391 - 24571220
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||| ||||    
T  24571391 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaataggattt 24571292  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||||||||||| |||||    
T  24571291 tgtcccccaaaaatcgaataaaacaacaaattactcaatgccataaaaaatttgtcatgtactgttctgcct 24571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 28675889 - 28675752
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  28675889 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 28675790  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  28675789 aatcgtataaaacaaaaaattactcaatgccataaaaa 28675752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 29646165 - 29646021
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29646165 gacaaaaacatatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatagcattttgtcccccaaa 29646066  T
Q  124 aatcatataaaac-aagaaattattcaataccataaaaatttgtc 167  Q
    |||| |||||||| || |||||||| ||| |||||||||||||||    
T  29646065 aatcgtataaaacaaaaaaattatttaatgccataaaaatttgtc 29646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 20609623 - 20609794
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20609623 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 20609722  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||| ||||| |||||| |||||  ||| ||||||||||| ||| ||||| |||||    
T  20609723 tgtccctcaaaaatcgtatataacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgcct 20609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 21221335 - 21221506
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  21221335 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 21221434  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||  |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  21221435 tgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgcct 21221506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 51259755 - 51259906
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  51259755 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 51259854  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    ||||||  |||||||||||||||||| |||||| ||||| ||||||||||||    
T  51259855 tgtcccttaaaaatcatataaaacaaaaaattactcaatgccataaaaattt 51259906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 26282373 - 26282527
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | ||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  26282373 gacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtccctcaaa 26282472  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||| |||||    
T  26282473 aatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgtt 26282527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 49748886 - 49749024
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||| |||||    
T  49748886 gcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaataccaaaataacattt 49748985  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaat 151  Q
     |||||||||||||| |||||||||| ||||||||||||    
T  49748986 cgtcccccaaaaatcgtataaaacaaaaaattattcaat 49749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 54622771 - 54622925
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  54622771 gcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattt 54622870  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||    
T  54622871 cgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaaattgtc 54622925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 38213458 - 38213293
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  38213458 gacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtccc 38213359  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||| |||||||||| |||||| ||| | |||| ||||||||||||||| ||||| |||||    
T  38213358 ccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgcct 38213293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 39052813 - 39052973
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  39052813 gcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 39052912  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat--aaaaatttgtcatgt 171  Q
    ||||||||||||||| |||||||||| |||||| ||||| | ||  |||||||||||||||    
T  39052913 tgtcccccaaaaatcgtataaaacaacaaattactcaatgctataaaaaaatttgtcatgt 39052973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 1344682 - 1344830
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||| ||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1344682 gcaagggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 1344781  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  1344782 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 1344830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 47958407 - 47958555
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47958407 gcaagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 47958506  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| |||||  ||||||||    
T  47958507 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgacataaaaa 47958555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 25860396 - 25860567
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  25860396 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatagcattt 25860495  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||| | ||||||||| |||||||||| |||||| ||| | |||| ||||||||||| |||  ||||||||||    
T  25860496 tgttctccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttgttatgcct 25860567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 40094613 - 40094462
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||    
T  40094613 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagcattt 40094514  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||| ||||||||  ||||||||| |||||| ||||| ||||||||||||    
T  40094513 tgtccctcaaaaatcgcataaaacaaaaaattactcaatgccataaaaattt 40094462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 51296691 - 51296544
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||||| || ||||||||||||    
T  51296691 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaatacaaaaatagcattt 51296592  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  51296591 tgtccccaaaaaatcgtataaaacaaaaaattactcaataccataaaa 51296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 53557770 - 53557941
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | | |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  53557770 gcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 53557869  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||  |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  53557870 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 53557941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 4851433 - 4851579
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| |  ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4851433 gcaagggacaggacaaaaactca--tttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 4851530  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  4851531 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 4851579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 29584979 - 29584814
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  29584979 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcct 29584880  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
     |||||||| ||||||| || |||||| ||||| | || ||||||||||  ||||||||| |||||    
T  29584879 tcaaaaatcgtataaaataaaaaattactcaatgcaataaaaaatttgttctgtactgttctgcct 29584814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 44117049 - 44116884
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  44117049 gcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattt 44116950  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| |||||    
T  44116949 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgtt 44116884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 42636390 - 42636549
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  42636390 acaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaa 42636489  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||| | |||||||| |||||| | ||| |||| ||||||||||| ||| ||||| |||||    
T  42636490 atcgtttaaaacaaaaaattacttaatgccataaaaaatttgtcctgtgctgttctgcct 42636549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 21374040 - 21373887
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| || | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21374040 gcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 21373941  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
      ||  ||||||||| ||||||| || |||||||||||| |||||||||||||||    
T  21373940 cttcggccaaaaatcgtataaaataa-aaattattcaatgccataaaaatttgtc 21373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 2135168 - 2135032
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||| |||||||| |||||    
T  2135168 acaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatagcactttgtccctcaaaa 2135069  T
Q  125 atcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||| |||||||||| |||||| ||||| |||||||||    
T  2135068 atcgtataaaacaaaaaattactcaatgccataaaaa 2135032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 19906872 - 19906765
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19906872 gcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaacaccaaaatagcattt 19906773  T
Q  113 tgtccccc 120  Q
     |||||||    
T  19906772 cgtccccc 19906765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 5442376 - 5442242
Alignment:
Q  38 tttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaaca 137  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||| |||||||| |||||||||    
T  5442376 tttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaatcgtataaaaca 5442277  T
Q  138 agaaattattcaataccat-aaaaatttgtcatgt 171  Q
    | |||||||||||| |||| |||||||||||||||    
T  5442276 aaaaattattcaatgccataaaaaatttgtcatgt 5442242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 50386437 - 50386595
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||| ||| |||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||    
T  50386437 gacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgttcc 50386536  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||  |||||||||| ||||||||||||   ||||||||||||| ||| |||||    
T  50386537 ccaaaaattgtataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgtt 50386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 20255143 - 20255007
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||    
T  20255143 gacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtccctcaaa 20255045  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  20255044 aatcttataaaacaaaaaattactcaatgccataaaaa 20255007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 25927302 - 25927467
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  25927302 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 25927401  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    ||| || |||||||| |||||||||| |||| | ||||| |||| ||||||||||| ||| |||||    
T  25927402 tgttcctcaaaaatcgtataaaacaaaaaatcactcaatgccataaaaaatttgtcttgtgctgtt 25927467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 44000371 - 44000207
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| ||||||||| ||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||  |||    
T  44000371 gcaaaggacatgacaaaaacagaattttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagttttt 44000272  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||| ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||| ||||    
T  44000271 tgtccaccaaaaatcgtataagaccaaaaattattcaataccataaaagtttgtcttgtattgtt 44000207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 22484718 - 22484882
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| ||  ||||||||| |||  |||||| ||| ||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  22484718 gcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaactttttgtcccacgtataagttgtctaaaatacaaaaatagcattt 22484817  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     ||| ||||||||| |||||| |||  |||||||||||||||||||||||||||| ||| |||||    
T  22484818 cgtcacccaaaaattatataatacagaaaattattcaataccataaaaatttgtcttgtgctgtt 22484882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 3695301 - 3695415
Alignment:
Q  47 ctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattat 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||  |||||||||| ||||||     
T  3695301 ctcaccaaaccacatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaattgtataaaacaacaaattac 3695400  T
Q  147 tcaataccataaaaa 161  Q
    ||||| |||||||||    
T  3695401 tcaatgccataaaaa 3695415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 24721593 - 24721463
Alignment:
Q  15 aaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttg 114  Q
    |||||||| |||||||||| ||||||| || ||||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||      
T  24721593 aaaggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaacaccaaaatagcatttca 24721494  T
Q  115 t-cccccaaaaatcatataaaacaagaaatt 144  Q
    | |||||||||| ||||||||||||||||||    
T  24721493 tccccccaaaaagcatataaaacaagaaatt 24721463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 45690881 - 45691033
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| |||||| ||||||||||     || |||||||||||||| |||| | ||||||||||||| |||||||| ||||||    
T  45690881 gcaaaggacaggacaaaaactgatatttttctccctcacca-----cagcacaactttttgtctcacgcataagttgtctaaaataccaaaatcgcattt 45690975  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     |||| ||||||||| |||||||||| |||||||||||| | |||||||||||||||||    
T  45690976 cgtcctccaaaaatcgtataaaacaa-aaattattcaatgctataaaaatttgtcatgt 45691033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 50678908 - 50678752
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||| ||| |||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  50678908 gcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtattt 50678809  T
Q  113 tgtcccccaaaaatcatataaaac--aagaaattattcaataccataaaaatttgtc 167  Q
      | || || ||||| ||||||||  || |||| ||||||||  |||||||||||||    
T  50678808 cattccacataaatcctataaaacaaaaaaaataattcaataatataaaaatttgtc 50678752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 41694925 - 41695029
Alignment:
Q  62 cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatactgaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41695024  T
Q  162 tttgt 166  Q
    |||||    
T  41695025 tttgt 41695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 44267824 - 44267698
Alignment:
Q  41 ttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaaga 140  Q
    ||||||||| |||||||||| || |||||||| |||||| ||||| |||||||||| || |||||||||||| |||  |||||||||||||||||||| |    
T  44267824 ttgtccctcgccaaaccacaacataactttttatcccacatacaaattgtctaaaatacaaaaatagcatttcgtcatccaaaaatcatataaaacaaaa 44267725  T
Q  141 aattattcaataccataaaaatttgtc 167  Q
    ||||||| ||||| |||||||||||||    
T  44267724 aattattgaatacgataaaaatttgtc 44267698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 34351349 - 34351499
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||  ||||| |||||||||| ||||||||| |||||||||||||| ||| |||||||||||||||| | ||||||| |||||| |||     
T  34351349 gacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttgtctaaaatatcaaaataacattttatcca 34351448  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    | ||||||| || || || | |||||||||||||| ||||||||| |||||    
T  34351449 caaaaaatcgtacaagaccataaattattcaatactataaaaattcgtcat 34351499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 52300541 - 52300442
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  52300541 ggacaggacaaaaactgaaatttttgtccatcaccaaaccacaacgcaattttttgtccca-gtacaagttgtctaaaacaccaaaatatcatttcgtcc 52300443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 39215449 - 39215547
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtc 116  Q
    |||||||||||||||||||||||||  |||| ||| ||||| |||| || ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  39215449 ggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataattttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 39215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 10747264 - 10747163
Alignment:
Q  77 cacgtacaagttgtctaaaacaccaaaatagcattttgtccccc-aaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactg 175  Q
    |||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||  |||||||||||||| ||| |||    
T  10747264 cacgtacaagttgtctaaaatatcaaaatagcattttgtccccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctg 10747165  T
Q  176 tt 177  Q
    ||    
T  10747164 tt 10747163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 25954554 - 25954407
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | ||||||||| |||||||||  ||| |||||||||||||| ||| || ||||||| ||||| || || ||| ||||| || ||    
T  25954554 gacacgacaaaaactcatatttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatactaatataacatttcgt-cc 25954456  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||| | ||||||| || ||||||||||||| ||||||||||||||    
T  25954455 ccaaaaagcgtataaaataaaaaattattcaatatcataaaaatttgtc 25954407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 53046670 - 53046764
Alignment:
Q  62 cacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||||||||||||||||||     |||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  53046670 cacaactttttgtcccacgtac-----gtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 53046764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 8648538 - 8648651
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||||||| |||| ||| || |||| |||||||||||||||||| || |||||| |||||||||| |||||||||   ||||||||     
T  8648538 gacatgacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtcca 8648637  T
Q  119 ccaaaaatcatata 132  Q
    ||||| ||||||||    
T  8648638 ccaaacatcatata 8648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 6179531 - 6179392
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccc-tcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtc 116  Q
    ||||| ||||||||||| |||||||||||| || |||||||||| |||||||||||||| ||||       ||||||||| || |||||| ||||| |||    
T  6179531 ggacaggacaaaaactgtaatttttgtcccctcgccaaaccacagcacaactttttgtcacacg-------tgtctaaaatacaaaaataacatttcgtc 6179439  T
Q  117 ccccaaaaatcatataaaacaagaaattattcaataccataaaaatt 163  Q
     || ||||||||||||| | |  ||||||||||||||||||||||||    
T  6179438 accaaaaaatcatataataaagaaaattattcaataccataaaaatt 6179392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 25395715 - 25395570
Alignment:
Q  22 aagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccca 121  Q
    |||||||||||||||||| ||||||||||  |||||| |   ||||||||| ||| |  || ||||||||||||| ||||||||| |||||||| | | |    
T  25395715 aagacaaaaactgaaattcttgtccctcattaaaccaaaatgcaactttttatcctaaatataagttgtctaaaataccaaaataacattttgttcacta 25395616  T
Q  122 aaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||| |||||||||| |||| || ||||  ||||||| ||||||    
T  25395615 aaaatcgtataaaacaaaaaataatgcaatgtcataaaagtttgtc 25395570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 28624910 - 28625048
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt-gtcccccaaaaat 126  Q
    ||||| |||||||||||||||||  ||| |||| || || ||||||||| ||||| ||||| ||||||| || |||||  |||||| |||  ||||||||    
T  28624910 aaaacagaaatttttgtccctcattaaagcacaacataaatttttgtcctacgtataagttatctaaaatacaaaaat--cattttagtctaccaaaaat 28625007  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | ||||| |||| ||||||||||||||||||||| ||||||    
T  28625008 cttataagacaaaaaattattcaataccataaaagtttgtc 28625048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 32768696 - 32768585
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||  || |||  ||| | |||||||||| || |||||| | ||||||| |    
T  32768696 gacatgacaaaaattgaaattattgtccctcactaaaccacatcacaactttccgttccaattactatttgtctaaaatactaaaataaccttttgtcac 32768597  T
Q  119 ccaaaaatcata 130  Q
    ||||||||||||    
T  32768596 ccaaaaatcata 32768585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 8067082 - 8067190
Alignment:
Q  63 acaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaat 162  Q
    ||||||||||||| |||||||||||| | ||||| | ||||||||| |||||||| | | ||||||||||| |  | |||| |||||||||||||||| |    
T  8067082 acaactttttgtcacacgtacaagttatataaaatatcaaaatagctttttgtccactagaaatcatataagatcaaaaatcattcaataccataaaagt 8067181  T
Q  163 ttgtcatgt 171  Q
     ||||||||    
T  8067182 atgtcatgt 8067190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 32621924 - 32621828
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    ||||||||||| ||||||||||||||||| |||||||||  || ||||||  |||||||  |||| ||||| ||||||||||||| ||||| |||||    
T  32621924 tttttgtcccatgtacaagttgtctaaaataccaaaataatatgttgtccatcaaaaattgtatacaacaaaaaattattcaatagcataacaattt 32621828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 14155441 - 14155528
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 106  Q
    ||||| ||||||||||||||||||  |||||||| ||| || | |||||||||||||| || ||||||||||||||||| | |||||||    
T  14155441 ggacatgacaaaaactgaaatttta-tccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaata 14155528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 26847431 - 26847281
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt-gtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||| ||||||||||||||||  ||||||| |  ||| |||| || |||||||| ||||||| |||||||||||||||| ||| |||  |   |||||||    
T  26847431 gacaggacaaaaactgaaattcatgtcccttataaaatcacaacaaaacttttttgtcccacatacaagttgtctaaaatacccaaaaggacatttgtcc 26847332  T
Q  118 cccaaaa-atcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     | |||| || |||||| || |  |||||||||||||||||||||||||||    
T  26847331 acaaaaacattatataacaccaacaattattcaataccataaaaatttgtc 26847281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 43175585 - 43175531
Alignment:
Q  107 gcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||| |||||||| |||||||||| |||||| |||||||||||||||    
T  43175585 gcattttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaaa 43175531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 17264658 - 17264741
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    ||||||| |||||||| || ||| |||| ||||||||| | ||  |||||||||||||||||||||| ||||| || |||||||    
T  17264658 gacaaaagctgaaattattatccttcactaaaccacataaaaaaattttgtcccacgtacaagttgtgtaaaatacaaaaatag 17264741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 42035665 - 42035808
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||||||||| |||||  |||| ||||||||   ||||||     |||| ||||||||||| ||||| | ||||| |||||||||||| | |||     
T  42035665 acaaaaactgaaattcttgtctttcactaaaccacaatgcaacttggcaacccaagtacaagttgtgtaaaatagcaaaacagcattttgtccacaaaac 42035764  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttgtca 168  Q
    ||  ||||| | || ||||| ||||||||||||||| |||||||    
T  42035765 atagtataagagaaaaaattgttcaataccataaaagtttgtca 42035808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 16145865 - 16145954
Alignment:
Q  82 acaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataa-aacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||| ||||||| || |||||||  |||||||| |||||||||||| || ||||| || |||||||| |||||||| |||||||||||    
T  16145865 acaagttatctaaaatacaaaaatagttttttgtccaccaaaaatcatacaagaacaa-aacttattcaaaaccataaatatttgtcatgt 16145954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 19190789 - 19190717
Alignment:
Q  34 gaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    ||||||| |||||||||| |||||||||||||| |||||||| ||| || ||||| ||||||| || |||||||    
T  19190789 gaaatttgtgtccctcactaaaccacatcacaa-tttttgtctcacatataagttatctaaaatacaaaaatag 19190717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 30258974 - 30258835
Alignment:
Q  21 caagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccc 120  Q
    |||||||||||||||||||| ||| || ||| ||||||||  |||||  || ||| ||||||||||| || ||| ||   |||||||  |||||||  |     
T  30258974 caagacaaaaactgaaatttgtgtaccccactaaaccacaatacaac-gttggtctcacgtacaagtcgtataagaccaaaaaatagtcttttgtctaca 30258876  T
Q  121 aaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||| ||||| || | |||||||| |||||||||||||    
T  30258875 aaaaatcgtataagaccaaaaattattgaataccataaaaa 30258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 26106712 - 26106617
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||| |||||||||||| |||||| |||||||| |||||  |||||| | | ||| ||||| ||||||| | ||||||| | |||||||| |||||    
T  26106712 aaaagtgaaatttttgttcctcactaaaccacaacacaatcttttgttcaaagtataagttttctaaaatagcaaaataactttttgtccaccaaa 26106617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 27176525 - 27176400
Alignment:
Q  41 ttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaaga 140  Q
    |||||||| || |||| | |||||||| |||| ||||||||| || |||||||||| |  |||| | | |||||||| |||||| |||||||| |  | |    
T  27176525 ttgtccctaactaaactatatcacaacgttttatcccacgtataaattgtctaaaatattaaaacaactttttgtccaccaaaa-tcatataagattaaa 27176427  T
Q  141 aattattcaataccataaaaatttgtc 167  Q
    ||||||||||||  |||||| ||||||    
T  27176426 aattattcaataaaataaaagtttgtc 27176400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 41683034 - 41683075
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccaca 60  Q
    ||||||||||||||||| | |||||||||||| |||||||||    
T  41683034 gacaagacaaaaactgatacttttgtccctcagcaaaccaca 41683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 36772122 - 36772017
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||||||||||| || ||||||  |||| | || |||| ||| |||||| ||||||  || ||||||||||||||||| || ||||| |  ||||||||     
T  36772122 gacaagacaaaatctaaaattt--gtccttaactaaactacaacacaaccttttgtaacaagtacaagttgtctaaaatacgaaaattgacttttgtcca 36772025  T
Q  119 ccaaaaat 126  Q
    ||||||||    
T  36772024 ccaaaaat 36772017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 29611051 - 29611221
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29611051 gcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacaccaaaatagcattt 29611150  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  29611151 cgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgttgttatgcct 29611221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 8673051 - 8673202
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8673051 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 8673150  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||| ||||||||||||||||||| |||||| ||||| ||||||||||||    
T  8673151 tgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaattt 8673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 35225771 - 35225617
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||    
T  35225771 gcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtctaaaatacaaaaatagcattt 35225672  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     ||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35225671 cgtcacccaaaaatcatataaaacaggaaattattcaataccataaaaatttgtc 35225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 37618388 - 37618558
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  37618388 gcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgttttaaataccaaaatagcattt 37618487  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||||  |||||||||| |||||||||||| ||||||| ||||||||||| ||||| |||||    
T  37618488 cgtcccccaaaaattgtataaaacaaaaaattattcaatgccataaacatttgtcatgtgctgttctgcct 37618558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 37664279 - 37664444
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37664279 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 37664378  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||| | ||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||| |||||    
T  37664379 tgtcgctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgtt 37664444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 15001563 - 15001428
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||    
T  15001563 acaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatagca-tttgtcccccaaaa 15001465  T
Q  125 atcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||||||||||  ||||||||||||||||||||||    
T  15001464 atcatataaaacagaaaattattcaataccataaaaa 15001428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 32303592 - 32303752
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  32303592 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 32303691  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  32303692 aatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 32303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 27104068 - 27103897
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27104068 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 27103969  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| ||||||||||||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  27103968 tgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 27103897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 34063237 - 34063078
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34063237 gcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 34063138  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| |||||||||| |||||||||||| |||| |||||||||||||||    
T  34063137 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgt 34063078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 10467167 - 10467009
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  10467167 gacaagacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccc 10467068  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| ||||||||| ||  |||||||||||||| ||| |||||    
T  10467067 ccaaaaatcgtataaaacaaaaaattattctatgtcataaaaatttgtcctgtgctgtt 10467009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 29563222 - 29563381
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  29563222 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattt 29563321  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  29563322 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 29563381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 45446564 - 45446393
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || ||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45446564 gcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 45446465  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  45446464 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 45446393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 4052589 - 4052420
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4052589 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 4052490  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||  |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  4052489 tgtccctcaaaaatcgtataaaaca--aaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 4052420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 12753321 - 12753468
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| ||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  12753321 gcaaatgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacattt 12753420  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||||||||| |||||||||| |||||| ||||| ||||||||    
T  12753421 tgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaa 12753468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 29672319 - 29672474
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  29672319 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattt 29672418  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtc 167  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| |||||||||||    
T  29672419 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatgaaaaatttgtc 29672474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 7591449 - 7591607
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||| ||||| ||||||||| |||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||    
T  7591449 gacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaatatcaaaatagcattttgtccc 7591548  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||||||| ||| |||||    
T  7591549 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgtt 7591607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 39642992 - 39642838
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  39642992 gcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaataccaaaatagcattt 39642893  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
      ||||||||||||  |||||||||| ||||||||||||  ||||||||||||||    
T  39642892 catcccccaaaaattgtataaaacaaaaaattattcaatgtcataaaaatttgtc 39642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 6386674 - 6386537
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  6386674 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 6386575  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  6386574 aatcgtataaaacaaaaaattactcaatgccataaaaa 6386537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 32020008 - 32020168
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  32020008 gacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaa 32020107  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  32020108 aatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 32020168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 41548721 - 41548573
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  41548721 gacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccc 41548622  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  41548621 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 41548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 41709886 - 41709738
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  41709886 gcaaatgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatagcattt 41709787  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  41709786 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 41709738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 30543018 - 30543165
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  30543018 gcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctaaaataccaaaataacattt 30543117  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||||||||| |||||||||  |||||| ||||| ||||||||    
T  30543118 tgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaa 30543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 31513579 - 31513738
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  31513579 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcattt 31513678  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||  |||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  31513679 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 31513738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 31732173 - 31732022
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  31732173 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatagcattt 31732074  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||| |||||||| |||||||||| |||||| ||||| ||||||||||||    
T  31732073 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattt 31732022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 16485805 - 16485975
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||  |||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| ||||||| || ||||||||||||    
T  16485805 gcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtataagttttctaaaatacaaaaatagcattt 16485904  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     ||| |||||||||||||||| |||  |||||||||||||||||||||||||||  ||| ||||| |||||    
T  16485905 cgtcacccaaaaatcatataatacagaaaattattcaataccataaaaatttgttttgtgctgttctgcct 16485975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 3251664 - 3251800
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  3251664 acaaaaacttatatttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaa 3251763  T
Q  125 atcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||| |||||||||| |||||| ||||| |||||||||    
T  3251764 atcgtataaaacaaaaaattactcaatgccataaaaa 3251800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 5968860 - 5969008
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||| |||||    
T  5968860 gcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaataacattt 5968959  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  5968960 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 5969008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 34101617 - 34101469
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||| ||||||||| | |||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||| |||||||||||||||    
T  34101617 gcaagggacaacacaaaaactcatatttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagcattt 34101518  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||  |||||||||    
T  34101517 tgtccctcaaaaatcgtataaaacaaaaaattactcaacgccataaaaa 34101469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 13406943 - 13407090
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| || || |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  13406943 acaaaaactcatatttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtgccccaaaa 13407042  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||| |||||||||| |||||| ||||| | || |||||||||||||||    
T  13407043 atcgtataaaacaaaaaattactcaatgctataaaaaatttgtcatgt 13407090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 40389149 - 40389002
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| |||||| || |||||||||||||| |||||||||||||||||| |||||||||| | |||  ||||||||||||||    
T  40389149 gcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttgttttaaatgccaaaatagcattt 40389050  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
     |||||||||||||| ||||||| || |||||||||||| ||||||||    
T  40389049 cgtcccccaaaaatcgtataaaataaaaaattattcaatgccataaaa 40389002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 30501254 - 30501100
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| || |||||| |||||    
T  30501254 gcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacattt 30501155  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |  ||||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  30501154 cgagccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 30501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 10656682 - 10656838
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| |||| ||||||||||||| ||||||||| |||| |||||||| |||||||||||||| ||||||||| |||||||||| | ||||||| || ||    
T  10656682 gcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatatcaaaataacaatt 10656781  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    ||||| | ||||||| ||||||| || ||||||||||||| ||||||||||||||||    
T  10656782 tgtccacaaaaaatcgtataaaagaaaaaattattcaataacataaaaatttgtcat 10656838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 14005040 - 14005188
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14005040 gcaagggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 14005139  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||   ||||||  |||||||||| |||||| |||||  ||||||||    
T  14005140 tgtccataaaaaattgtataaaacaaaaaattactcaatgtcataaaaa 14005188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 22999361 - 22999213
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt-gtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||| |||||||||||| |||||||||||||| ||||||| | || |||||||| ||||||||||||| |||||||||| | ||||||||||||||||||    
T  22999361 gacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgtcc 22999262  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
     ||||||||| |||||||||| ||||||||||||  |||||||||||||    
T  22999261 tccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 22999213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 45114153 - 45113994
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | ||||||||||||||||||||||||  |||||||||||||  | ||||||||||||||||| ||||||||||||||| |||| |||||    
T  45114153 gacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaataccaaaatagcatttcgtcctccaaa 45114054  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||| |||||||||  ||||||||||||  |||| |||||| ||||||  ||||||||||    
T  45114053 aatcgtataaaacataaaattattcaatgtcatacaaatttatcatgtgttgttatgcct 45113994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 7394810 - 7394958
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  7394810 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 7394909  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||  ||||||||  ||||||||| |||||| ||| | |||||||||    
T  7394910 tgtccttcaaaaatcgcataaaacaaaaaattactcagtgccataaaaa 7394958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 25478347 - 25478204
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| || ||||||| | |||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  25478347 ggacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtcc 25478248  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |  ||||||| |||||||||| |||||| ||||| |||||||||    
T  25478247 ctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 25478204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 17805800 - 17805667
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||| ||||||||||||| | ||||||| |||||| |||||||||||||||||||| ||||||||| |||||    
T  17805800 gcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaataccaaaataacattt 17805701  T
Q  113 tgtcc-cccaaaaatcatataaaacaagaaatta 145  Q
    ||||| |||||||||| |||||||||| ||||||    
T  17805700 tgtcctcccaaaaatcgtataaaacaaaaaatta 17805667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 21272787 - 21272689
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  21272787 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtcc 21272689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 6460344 - 6460218
Alignment:
Q  40 tttgtccctcaccaaaccacatcacaacttttt-gtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaa 138  Q
    |||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||   ||||||| ||||| |||     
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtccataaaaaatcgtataagaca- 6460246  T
Q  139 gaaattattcaataccataaaaatttgtc 167  Q
     ||||||||||||||||||||||||||||    
T  6460245 -aaattattcaataccataaaaatttgtc 6460218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 27109561 - 27109699
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||| ||| ||||||||||| |||||||||||||||| ||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  27109561 atttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataacatttcgtcccccaaaaatcatataaaac 27109660  T
Q  137 --aagaaattattcaataccataaaaatttgtcatgtac 173  Q
      || |||||||||||| | || |||||||||| |||||    
T  27109661 aaaaaaaattattcaatgctattaaaatttgtcctgtac 27109699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 10320287 - 10320424
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    |||||| |||||| || ||||||||||||||||| |||||||||||  | |||||||||||||||||||| | ||||||| |||||||||   ||| |||    
T  10320287 aaaaacagaaattcttatccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtctaacaacaat 10320386  T
Q  127 catataaaacaagaaattattcaataccataaaaattt 164  Q
    | |||||||| | |||||||||||||||||||||||||    
T  10320387 cgtataaaaccaaaaattattcaataccataaaaattt 10320424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 16595145 - 16595315
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||   || ||||||||||| | || ||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||    
T  16595145 gcaagggacaggacaaaaacatgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatacaaaaatagctttt 16595244  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    ||| | ||||||||| ||||| || | |||||||||||||||| |||| |||| ||| |||| || |||||    
T  16595245 tgttcaccaaaaatcgtataagaccaaaaattattcaataccaaaaaagtttgccatttacttttctgcct 16595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 37861962 - 37861866
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgt 115  Q
    |||| |||||||||| | |||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37861962 gacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgt 37861866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 17520678 - 17520546
Alignment:
Q  39 ttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac-- 136  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||        ||||||||||||||||||||||||||||| ||||||||      
T  17520678 ttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgt--------ccaaaatagcattttgtcccccaaaaatcgtataaaacaa 17520587  T
Q  137 aagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    || |||| || |||  | ||||||||||||| |||||||||    
T  17520586 aaaaaataatccaacgctataaaaatttgtcctgtactgtt 17520546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 10932819 - 10932681
Alignment:
Q  39 ttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaa 138  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||| ||||||||||  ||||||||   |||  |  ||||| || |    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccataaaattttttataagacca 10932720  T
Q  139 gaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
     |||||||||||||||||| ||||||||| || ||||||    
T  10932719 aaaattattcaataccatacaaatttgtcttgcactgtt 10932681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 37474761 - 37474662
Alignment:
Q  80 gtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttat 179  Q
    ||||||||||||||||| |||||| |||| |||| | ||||||||||| ||||||| || ||||||||||||  |||||||||||||||||| |||||||    
T  37474761 gtacaagttgtctaaaataccaaactagcgtttttttccccaaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgttat 37474662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 54274 - 54133
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||  |||||||||||| |  | ||||||||||||||||||||||||||| |||||||| || |||| | |||||||  ||||| |||    
T  54274 ggacatgacaaaaacataaatttttgtcctttgctaaaccacatcacaactttttgtcccacatacaagttatcgaaaata-caaaataatattttatcc 54176  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
     | ||||||| | ||| |||| |||||||||||||||||||||    
T  54175 acaaaaaatcgtttaagacaaaaaattattcaataccataaaa 54133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 36426243 - 36426398
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||| |||||||||||| ||| |||||||  | || |||||||| |||| ||||||||| ||| |||||||||||||||| ||||||||||  |||    
T  36426243 gcaagggataagacaaaaactaaaaattttgtcatttactaaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttt 36426342  T
Q  113 tgtcccc--caaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    ||||| |   ||||| ||||||||||   | ||||||||||| ||||||| |||||    
T  36426343 tgtccacaaaaaaaaccatataaaaccgaagattattcaatatcataaaattttgt 36426398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 15351800 - 15351687
Alignment:
Q  57 cacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat 156  Q
    |||| |||||||||||||| ||  ||||| |||||||||| ||||||||| |||||| ||  ||||||||| |||||||  | ||||||||||||| |||    
T  15351800 cacaacacaactttttgtctcagttacaaattgtctaaaataccaaaataacattttatcaaccaaaaatcgtataaaatca-aaattattcaatatcat 15351702  T
Q  157 aaaaatttgtcatgt 171  Q
    |||||||| ||||||    
T  15351701 aaaaatttatcatgt 15351687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 22756413 - 22756520
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||  |||||||| |||||||  | |||||| |||||||||||||  |||||||||||| ||||||| || |||||||  |||| |||     
T  22756413 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 22756512  T
Q  119 ccaaaaat 126  Q
    ||||||||    
T  22756513 ccaaaaat 22756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 5892171 - 5892095
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaa 95  Q
    ||||||||||||||||||||| |||||| |||  |||||  | |||||||||||||| |||||| ||||||||||||    
T  5892171 gacaagacaaaaactgaaattattgtccttcattaaaccgtaacacaactttttgtcacacgtataagttgtctaaa 5892095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10531387 - 10531244
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| |||| || ||||||||||||| |||| |||||| |||||| |  |||||||||| || ||| ||||| |||| || || |||||||||   |||    
T  10531387 gcaaaagacatgataaaaactgaaattcttgttcctcactaaaccaaaatacaactttttatctcacatacaaattgtttagaataccaaaataatcttt 10531288  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat 156  Q
    |||||   ||||||| ||||| | || |||||||||||||||||    
T  10531287 tgtccataaaaaatcttataagataaaaaattattcaataccat 10531244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 3800939 - 3801033
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    |||| |||||||||||||||  || ||||||| |||||  ||||||||||||||||||||||  ||| ||| |||| ||||||| || |||||||    
T  3800939 gcaagggacaagacaaaaacataagtttttgttcctcattaaaccacatcacaactttttgtttcacatactagttatctaaaatacaaaaatag 3801033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 14959027 - 14958948
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataa 133  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| | ||||||| | ||||| || | ||||||| |||||    
T  14959027 aaaccacaacacaactttttgtcccacgtacaag-tgtctaaaatatcaaaataactttttgcccacaaaaaatcgtataa 14958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 32918909 - 32918842
Alignment:
Q  98 accaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttg 165  Q
    ||||||||||||||| ||||||| |||||  |||||||||| |||||||| |||  ||||||||||||    
T  32918909 accaaaatagcatttcgtccccccaaaattgtataaaacaaaaaattatttaatgtcataaaaatttg 32918842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 5859518 - 5859615
Alignment:
Q  63 acaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    |||||||||||||  ||||||||||| ||||||| || ||||||| |||||||||   ||||||| ||||| || |  ||||| ||||||| ||||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatagtattttgtccataaaaaatcttataagaccaataattaatcaatacaataaaa 5859615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 28746377 - 28746268
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| ||||||||| | | ||||| |||||||||  ||||||| | ||||||||| || || |  | ||||||||||||  ||||||||||| ||    
T  28746377 tttttgtcctacgtacaagctatttaaaataccaaaataaaattttgttcaccaaaaatcgtacaagatcaaaaattattcaatgtcataaaaatttatc 28746278  T
Q  168 atgtactgtt 177  Q
    |||| |||||    
T  28746277 atgtgctgtt 28746268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 4599711 - 4599615
Alignment:
Q  74 tcccacgtacaagttgtctaaaacaccaaaa-tagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    ||||||||||||||| ||||||| || |||| || | |||||||  |||||||| |||||  | || |||||||||||||| |||||||||| ||||    
T  4599711 tcccacgtacaagttatctaaaatacaaaaaataactttttgtctaccaaaaattatataggataaaaaattattcaatacaataaaaatttatcat 4599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 171
Target Start/End: Complemental strand, 9624219 - 9624188
Alignment:
Q  140 aaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||||||||||||||||||||||||||||    
T  9624219 aaattattcaataccataaaaatttgtcatgt 9624188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 11944944 - 11944890
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 107  Q
    ||||||||  ||||||||||||| || |||||| |||||||||| ||||||||||    
T  11944944 aaaccacactacaactttttgtctcatgtacaatttgtctaaaataccaaaatag 11944890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 11926878 - 11926939
Alignment:
Q  65 aactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||||||| || |||||| |||||||||| ||||||||||  |||||| || |||||||    
T  11926878 aactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttgtgcctcaaaaat 11926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 8073274 - 8073186
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacacca 101  Q
    |||| ||||| || ||| |||||| || |||||  |||| | ||||||||| ||||||||||  |||||| ||||||||||||| ||||    
T  8073274 gcaatggacatgataaagactgaatttcttgtcattcacgagaccacatcataactttttgtgtcacgtataagttgtctaaaatacca 8073186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 6896277 - 6896107
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| || |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6896277 gcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 6896178  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6896177 cgtcccccaaaaggcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgcct 6896107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 19513670 - 19513818
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19513670 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 19513769  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  19513770 tgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaa 19513818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 33889352 - 33889181
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33889352 gcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 33889253  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgtactgttatgcct 183  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||| |||| ||||| |||||    
T  33889252 tgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgttatgtgctgttctgcct 33889181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 9732911 - 9733059
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  9732911 gcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 9733010  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  9733011 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaa 9733059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 13829542 - 13829394
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||    
T  13829542 ggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacaccaaaatatcatttcgtcc 13829443  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    | ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13829442 ctcaaaaatcatataaaacaaaaaattattcaatatcataaaaatttgt 13829394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 44284738 - 44284567
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  44284738 gcaagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcattt 44284639  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  44284638 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 44284567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 5278815 - 5278986
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  5278815 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 5278914  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||  |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  5278915 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 5278986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 30798484 - 30798635
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  30798484 aaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 30798583  T
Q  127 catataaaacaagaaattattcaataccata-aaaatttgtcatgtactgtt 177  Q
    | |||||||||| |||||| | ||||||||| |||||||||||||| |||||    
T  30798584 cgtataaaacaaaaaattactaaataccatacaaaatttgtcatgtgctgtt 30798635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 32498024 - 32497853
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  32498024 gcaagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 32497925  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||  |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  32497924 tgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 32497853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 34338919 - 34338768
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  34338919 gcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttgtctaaaataccaaaatagcattt 34338820  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||||| |||||||| |||||||||| |||||| ||||| ||||||||||||    
T  34338819 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattt 34338768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 18685945 - 18685780
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||| |||||    
T  18685945 gcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaataacattt 18685846  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| |||||    
T  18685845 tgtccctcaaaaatcctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgtt 18685780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 7761554 - 7761702
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  7761554 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 7761653  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| |||||  ||||||||    
T  7761654 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaa 7761702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 16104383 - 16104235
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  16104383 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcattt 16104284  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  16104283 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 16104235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 17540824 - 17540652
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacacc-aaaatagcatt 111  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| |||    
T  17540824 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaaatagtatt 17540725  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||| |||||||| |||||||||| |||||| ||||| |||| |||||| |||||||| ||||| |||||    
T  17540724 ttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatatgtcatgtgctgttctgcct 17540652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 35114894 - 35114746
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  35114894 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 35114795  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||| | |||||||||    
T  35114794 tgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaaaa 35114746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 30712969 - 30712798
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaa----ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagc 108  Q
    |||| ||||| |||| |||||||||||||||||||||||||||    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |    
T  30712969 gcaagggacaggacacaaactgaaatttttgtccctcaccaaattaaccacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaatatc 30712870  T
Q  109 attttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgc 181  Q
    ||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||    
T  30712869 atttcatcccc-aaaaatcatataaaacaaaaaattattcaataccataaaaatttgtcctttgctgttatgc 30712798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 32766485 - 32766640
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt-gtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||| ||||||||| ||||    
T  32766485 gcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggttgtctaaaataccaaaataacatt 32766584  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | |||| ||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  32766585 tcgtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtc 32766640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 42706468 - 42706302
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||| |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  42706468 gcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattt 42706369  T
Q  113 tgtcccccaaaaatcatataaaac-aagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||| || |||||| ||||| |||| ||||||||||| ||| |||||    
T  42706368 tgtccctcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcctgtgctgtt 42706302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 2645078 - 2645215
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||    
T  2645078 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcctcaaa 2645177  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  2645178 aatcgtataaaacaaaaaattactcaatgccataaaaa 2645215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 33366719 - 33366554
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||| |||||    
T  33366719 gcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttgtctaaaataccaaaataacattt 33366620  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||||||||| |||| ||||||||||| ||| |||||    
T  33366619 tgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgtt 33366554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 3913452 - 3913592
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||    
T  3913452 gacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctccccaaa 3913551  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||| |||||||||| | |||||||||| ||||||||||||    
T  3913552 aatcgtataaaacaaaatattattcaatgccataaaaattt 3913592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 7259006 - 7258834
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-tt 111  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| || ||    
T  7259006 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 7258907  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||| |||||||  |||||||||| |||||| ||||| |||| |||||||||||||||||| || |||||    
T  7258906 ttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactattctgcct 7258834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 37003861 - 37003997
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||    
T  37003861 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaa 37003960  T
Q  125 atcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||| ||||||| || |||||||||||| |||||||||    
T  37003961 atcgtataaaataaaaaattattcaatgccataaaaa 37003997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 40832450 - 40832610
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||| ||||    
T  40832450 gcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagtattt 40832549  T
Q  113 tgtcccccaaaaatcatataaaacaaga--aattattcaataccataaaaatttgtcatgt 171  Q
     |||||||||||||| |||||||||| |  ||| ||||||||  |||||||||||||||||    
T  40832550 cgtcccccaaaaatcgtataaaacaaaaataataattcaataatataaaaatttgtcatgt 40832610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 41934690 - 41934537
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    ||||| ||||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||| |||||    
T  41934690 gcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaataccaaaataacattt 41934591  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    ||||| ||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  41934590 tgtccaccaaaaatcatataagacataaaatcattcaataccgtaaaaatttgt 41934537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 9717322 - 9717182
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  9717322 gacaaaaactcatgtttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaa 9717223  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    |||| ||| |||||| ||||||  |||| ||||||||||||    
T  9717222 aatcgtatcaaacaaaaaattacccaatgccataaaaattt 9717182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 10399862 - 10400009
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||| |||| |||||||| |||||||||||||| || ||| |||||||||||||  |||||||||||||||||||||||||    
T  10399862 gacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaaatccaaaatagcattttgtcccccaaa 10399961  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    | || |||||||||| |||||||||||| |||||||||||| ||||||    
T  10399962 agtcgtataaaacaaaaaattattcaatgccataaaaatttatcatgt 10400009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 26419027 - 26418885
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||    
T  26419027 ggacatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcc 26418928  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    |||||||||  |||||||||| |||||| ||| | ||||||||    
T  26418927 cccaaaaattgtataaaacaaaaaattactcattgccataaaa 26418885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 12939281 - 12939406
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||| || |||||||||||||||||| | ||||||||| |||||    
T  12939281 gcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataacattt 12939380  T
Q  113 tgtcccccaaaaatcatataaaacaa 138  Q
    ||||||||||||||||||||||||||    
T  12939381 tgtcccccaaaaatcatataaaacaa 12939406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 42365686 - 42365538
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||| ||| ||||||||| ||||||||||| |  |||| ||||||||||||||| ||||||||| |||||    
T  42365686 gcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtctaaaataccaaaataacattt 42365587  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||| |||||||||||||||||| |||||| ||||| |||||||||    
T  42365586 tgtcccctaaaaatcatataaaacaaaaaattactcaatgccataaaaa 42365538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 16177864 - 16178016
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||| ||||||| ||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| | ||||    
T  16177864 gcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatggaattt 16177963  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||  |||||||||||| | |||||||||||||    
T  16177964 cgtcccccaaaaatcgtataaaaca--aaattattcaatgctataaaaatttgtc 16178016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 30326318 - 30326463
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | ||||| ||| ||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  30326318 ggacaggacaaaaactcatatttt-gtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtcc 30326416  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
    | |||||||| |||||||||| |||||| ||||| ||||||||||||    
T  30326417 ctcaaaaatcgtataaaacaaaaaattactcaattccataaaaattt 30326463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 28824549 - 28824702
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| || |||||||||||| |  |||||||    
T  28824549 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatactaaaatagcatttcgcaccccaaa 28824648  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||  |||||||||| || |||||| ||  ||||||||||||||||||| ||||    
T  28824649 aattgtataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgtt 28824702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 38623285 - 38623431
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| ||    || |||||    
T  38623285 gcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctagaacgcc----taacattt 38623380  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatt 163  Q
      || |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  38623381 catctcccataaatcatataaaacaaaaaattattcaatatcataaaaatt 38623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 38993052 - 38993197
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||||||  ||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  38993052 gcaagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattt 38993151  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataa 158  Q
     ||| ||||||||| |||||| |||  |||||||||||||||||||    
T  38993152 cgtcacccaaaaataatataatacagaaaattattcaataccataa 38993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 11114981 - 11114830
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| | | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||    
T  11114981 gcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatagtattt 11114882  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
     |||| | || |||| |||||||| | |||||||||||| ||||||||||||    
T  11114881 cgtccgctaacaatcgtataaaacgaaaaattattcaatgccataaaaattt 11114830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 12672466 - 12672593
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||| || | |||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  12672466 gacaaaatctcatatttttgtccctcaccaaaccacaacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaa 12672565  T
Q  124 aatcatataaaacaagaaattattcaat 151  Q
    |||| |||||||||| |||||| |||||    
T  12672566 aatcgtataaaacaaaaaattactcaat 12672593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 37308764 - 37308606
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  37308764 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaatagtattt 37308665  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||||||  ||||||| || |||  || |||||| ||||| |||| |||||||||||||||    
T  37308664 tgtccctaaaaaatcgta-aaacaaaaaaattactcaatgccataaaaaatttgtcatgt 37308606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 40692401 - 40692243
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| ||||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||        |||||||||||||||||    
T  40692401 ggacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtct--------aaaatagcattttgtcc 40692310  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    | |||||||| |||||||||| |||||||||||| |||| ||||||||||| ||| ||||| |||||    
T  40692309 ctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgcct 40692243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 1247250 - 1247101
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| ||||||| || | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||        |||||||||||| || ||    
T  1247250 gacaggacaaaatctcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtct--------aaaatagcatttcgttcc 1247159  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgt 176  Q
    ||||||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||    
T  1247158 ccaaaaatcgtataaaataaaaaattattcaatgccataaaaatttgtcttgtactgt 1247101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 41366102 - 41366239
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||| ||||||||| |||| | ||| | |||    
T  41366102 gacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaaataccaaaataacattgtatccacaaaa 41366201  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatt 163  Q
    ||| |||||| |||  ||||||||||||| ||||||||||    
T  41366202 aattatataagaca--aaattattcaatatcataaaaatt 41366239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 2086169 - 2086022
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | ||||||||||||  ||||||||||  ||||||||||||  |||||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  2086169 acaaaaactcatatttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtccctcaaaa 2086070  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    ||| |||||||||| |||||| |||||  ||| |||||||||||||||    
T  2086069 atcgtataaaacaaaaaattactcaatggcataaaaaatttgtcatgt 2086022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 39461401 - 39461252
Alignment:
Q  38 tttttgtccctcaccaaaccacatca---caactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaa 134  Q
    |||||||||||||||||| |||| ||   ||||||||| || |||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  39461401 tttttgtccctcaccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaa 39461302  T
Q  135 acaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    | || |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  39461301 ataaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgcct 39461252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 4641601 - 4641487
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    ||||||||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||| |||||||||||||||||| || |||||||| ||||||||    
T  4641601 atttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatagcattttgttcctcaaaaatcgtataaaac 4641502  T
Q  137 aagaaattattcaat 151  Q
    || |||||| |||||    
T  4641501 aaaaaattactcaat 4641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 45463115 - 45463248
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    ||||||||| |||||||||||||| ||||||||||||||  |||||||  |||||||||| | ||||||| ||||| || ||||| ||||| ||||||||    
T  45463115 atttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaatatcaaaataacatttcgt-ccccagaaatcgtataaaac 45463213  T
Q  137 aagaaattattcaataccataaaaatttgtcatgt 171  Q
    || |||||||| ||| | |||||||||||||||||    
T  45463214 aaaaaattatttaatgcaataaaaatttgtcatgt 45463248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 27462788 - 27462939
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||||||||||| |||  |||||||||||||||||||||||| ||||||||||| || | | ||||  ||||| |||| ||||||||||||||| || |    
T  27462788 ggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaactttttatcac-catacatattgtcaaaaataccaaaatagcatttcgtgc 27462886  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    || ||||||| || ||||||| ||||||||||||  |||| |||||||||||||    
T  27462887 cctaaaaatcgta-aaaacaaaaaattattcaatgtcatataaatttgtcatgt 27462939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 20907664 - 20907542
Alignment:
Q  47 ctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattat 146  Q
    ||||||||||||||  |||| ||||||||| | |||||| |||| ||||| || |||||| |||||| ||||||||||||| || ||||||| |||||||    
T  20907664 ctcaccaaaccacagaacaattttttgtcctatgtacaaattgtataaaatactaaaataacattttatcccccaaaaatcgtacaaaacaaaaaattat 20907565  T
Q  147 tcaataccataaaaatttgtcat 169  Q
    |||||  ||||||||||||||||    
T  20907564 tcaatgacataaaaatttgtcat 20907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 37088376 - 37088216
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||| |||||  ||| |  |||| | ||| ||||| ||||||||||||||||||||     
T  37088376 gacaagacaaaaactgaaattcttgtccctcactaagccacaacacatcttttcatcctaaatacatgatgtttaaaataccaaaatagcattttgtcca 37088277  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttat 179  Q
     |||| |||  |||| |||  ||||| |||||||||||| ||||||||| ||| |||||||    
T  37088276 tcaaacatcggataagacacaaaattgttcaataccatacaaatttgtcttgtgctgttat 37088216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 26981690 - 26981781
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaa 104  Q
    ||||| |||| |||||||||| | |||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||| |||||||    
T  26981690 gcaaatgacatgacaaaaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 18793297 - 18793390
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| ||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||  |||||||||| |||||| ||||| |||||||||    
T  18793297 ttttagtctcacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaattgtataaaacaaaaaattactcaatcccataaaaa 18793390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 35472981 - 35473137
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||||| |||||||||||||| || | |||||| |||||||    ||| ||||||||||||||||||||||||||||| |||| |||| | |||    
T  35472981 gcaagggacaagtcaaaaactgaaattcttattcctcactaaaccactctgcaattttttgtcccacgtacaagttgtctaaaataccataatatccttt 35473080  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    |||||   |||| |  ||||| || | |||||||| |||||||| ||||||||||||    
T  35473081 tgtccataaaaatttgtataagaccaaaaattatttaataccatcaaaatttgtcat 35473137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 8112403 - 8112248
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct-aaaacaccaaaatagca-ttttgtc 116  Q
    ||||| ||||||||| | ||||||||| |||||||||||||| ||||||||||||| |||  ||||| | |||| |||| ||||||||| || |||| ||    
T  8112403 gacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgttccagatacaaatagtctaaaaataccaaaataacatttttttc 8112304  T
Q  117 ccccaaaaatcatataaaacaagaaattattcaataccata-aaaatttgtcatgt 171  Q
    ||  ||||||| |||||||||| |||||| |||||  |||| ||||||||||||||    
T  8112303 ccttaaaaatcgtataaaacaaaaaattactcaatgtcatacaaaatttgtcatgt 8112248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 26796315 - 26796218
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataa 133  Q
    |||||| |||||||||| ||| |||| | |||||||||||| |||||||||||||||||||| ||| ||||||  |||||||| |||||||||||||||    
T  26796315 aaatttgtgtccctcactaaagcacaacgcaactttttgtcacacgtacaagttgtctaaaatacc-aaatagtcttttgtccaccaaaaatcatataa 26796218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 130393 - 130255
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaa-----ctttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaa 122  Q
    |||||| |||||||||||||||||||||||||| |||||      ||||| ||  |||||||| || ||||||| ||||||||| |||||  |||  |||    
T  130393 aaaacttaaatttttgtccctcaccaaaccacaacacaattaatatttttatcttacgtacaaattatctaaaataccaaaatatcatttcatcctacaa 130294  T
Q  123 aaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||| |||  |||||||||||||  |||||||    
T  130293 aaattatataatacataaaattattcaatataataaaaa 130255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 36843565 - 36843488
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    |||||||||||||| ||||||| |||||||||||||||||||  |  || |||||||||||||| || || |||||||    
T  36843565 gacaagacaaaaaccgaaatttgtgtccctcaccaaaccacaaaatcaccttttgtcccacgtataatttatctaaaa 36843488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 25383240 - 25383087
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtc-------ccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    |||| ||||||||| ||| |||||||||||||| ||| |||  ||||||||||||||       | ||||||||| ||||||||| || || |||   ||    
T  25383240 gacatgacaaaaacagaa-tttttgtccctcactaaatcactgcacaactttttgtctatttgtctacgtacaagatgtctaaaatacaaatataagctt 25383142  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
    |||||| | ||||||| ||||| |||| ||||||||||||||| |||||| ||||    
T  25383141 ttgtccacaaaaaatcgtataagacaacaaattattcaataccgtaaaaacttgt 25383087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 18278999 - 18278928
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    ||||||||| |||||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| |||| |||||    
T  18278999 acaaaaactaaaatttttgttcctcactaaatcacgtcacaactttttgtctcacatacaaattgtataaaa 18278928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 38786512 - 38786592
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaa 95  Q
    |||| |||||||| |||||||||||||||| ||  |||| |||||| | |||||| ||||||| |||||| ||||||||||||    
T  38786512 gcaatggacaagataaaaactgaaatttttctc--tcactaaaccaaaacacaacattttgtctcacgtataagttgtctaaa 38786592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 18126979 - 18127073
Alignment:
Q  23 agacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||||| ||||| ||||||||  |||  |||||||| |||||||||||||| || ||||||||| | ||||| | ||||||| | ||||||||    
T  18126979 agacaaaagctgaactttttgtctatcattaaaccacaacacaactttttgtctcaagtacaagttatgtaaaatagcaaaataacgttttgtcc 18127073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 2394371 - 2394266
Alignment:
Q  22 aagacaaaaactgaaatttt-tgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccc 120  Q
    |||||||||||||||||||| |||||||| | ||| |||| ||||||||||| || || | | | ||||||||||| || | |||||  |||||||| ||    
T  2394371 aagacaaaaactgaaattttgtgtccctcgctaaagcacagcacaactttttatctcatgcatatgttgtctaaaatacaataatagttttttgtcctcc 2394272  T
Q  121 aaaaat 126  Q
    ||||||    
T  2394271 aaaaat 2394266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 7294427 - 7294531
Alignment:
Q  68 tttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||||| ||||||||||||||  |||| ||||||||||  |||| | | |||||| |||||||| |||| || |||||  ||| ||||||| ||| ||    
T  7294427 tttttgtctcacgtacaagttgtaaaaaataccaaaatagtcttttattcaccaaaactcatataagacaaaaagttatttgataacataaaagtttatc 7294526  T
Q  168 atgta 172  Q
    |||||    
T  7294527 atgta 7294531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 15303232 - 15303304
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    |||||||||  |||||||||||| | | ||||| ||||||||||||||||| |||| |  |||||||||||||    
T  15303232 gacaaaaacataaatttttgtcctttatcaaactacatcacaactttttgttccacatgtaagttgtctaaaa 15303304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 1230995 - 1230881
Alignment:
Q  38 tttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaaca 137  Q
    ||||||||  |||| |||||||||| |||||||||||| || |||||| ||  |||||| || |||||| | |||||||| |||| |||  ||||  ||     
T  1230995 tttttgtctttcactaaaccacatctcaactttttgtctcatgtacaaattacctaaaatacaaaaatatctttttgtccaccaacaatagtatatgacc 1230896  T
Q  138 agaaattattcaata 152  Q
    | |||||||||||||    
T  1230895 aaaaattattcaata 1230881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 13249421 - 13249485
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||||| ||||| ||||||||| | ||||||||||| ||||| | ||||||||  ||||||||    
T  13249421 aaaccacaacacaattttttgtccaaagtacaagttgtttaaaatatcaaaatagacttttgtcc 13249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 35170200 - 35170260
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccac 79  Q
    |||| |||||||| ||||||||||||||||| |  ||| ||| ||||||||| ||||||||    
T  35170200 gacacgacaaaaattgaaatttttgtccctcgctgaacaacaacacaactttctgtcccac 35170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 40767255 - 40767207
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt 72  Q
    |||||||||| || |||||||||||||| |||||||| || ||||||||    
T  40767255 gacaaaaactaaattttttgtccctcactaaaccacaacataacttttt 40767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 2e-66; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 18470415 - 18470582
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  18470415 gcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacattt 18470514  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatg 180  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  18470515 cgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgttctgtgctgttatg 18470582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 32528819 - 32528653
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32528819 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 32528720  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    | |||||||| |||||||||| |||||||||||| |||| ||||||||||||||| ||||| |||||    
T  32528719 ctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgcct 32528653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 39788302 - 39788136
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagca-tt 111  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||    
T  39788302 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacattt 39788203  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  39788202 ttgtcccccaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcatgtgctgtt 39788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 8560968 - 8561126
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||    
T  8560968 agcaaaggacaagacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacatt 8561067  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    | || ||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||    
T  8561068 tcgt-ccccaaaaatcgtataaaacaaaaaattaatcaatgccataaaaatttgtcatgt 8561126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 3735466 - 3735312
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  3735466 gcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 3735367  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||| ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  3735366 tgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 3735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 31644547 - 31644401
Alignment:
Q  21 caagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccccc 120  Q
    ||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  31644547 caagacaaatactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccct 31644448  T
Q  121 aaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    |||||||||||||||||  ||||||||||||  ||||||||||||||    
T  31644447 aaaaatcatataaaacataaaattattcaatgtcataaaaatttgtc 31644401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 31880069 - 31880234
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  31880069 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgtccc 31880168  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| |||| ||||| |||| ||||||||||||  ||| ||||||||||||||||||||| |||||    
T  31880169 ccaacaatcgtataatacaaaaaattattcaatgtcataaaaaatttgtcatgtactgttctgcct 31880234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 31770578 - 31770749
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  31770578 gcaagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattt 31770677  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| ||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  31770678 tgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 31770749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 4818134 - 4818275
Alignment:
Q  20 acaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  4818134 acaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccct 4818233  T
Q  120 caaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
     ||||||| |||||||||| |||||| ||||| |||||||||    
T  4818234 aaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 4818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 7523281 - 7523109
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7523281 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 7523182  T
Q  113 tgtcccccaaaaatcatataaaac-aagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| |||||||| |||||||| || |||||| |||||  ||| ||||||||||| ||| ||||| |||||    
T  7523181 tgtccctcaaaaatcgtataaaacaaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgcct 7523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 34794996 - 34794848
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34794996 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcattt 34794897  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||| |||||||| || |||||||||| |||||||||||| ||| |||||    
T  34794896 tgttccccaaaattcgtataaaacaaaaaattattcaatgccacaaaaa 34794848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 40182549 - 40182402
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaac 40182450  T
Q  137 aagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    || |||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  40182449 aaaaaattactcaatgccataaaaaatttgtcatgtgctgttttgcct 40182402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 24181616 - 24181782
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24181616 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtcc 24181715  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||| ||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  24181716 cccaaagatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 24181782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 32092969 - 32093138
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  32092969 gcaaaggataggacaaaaactgaaatttttgtcc-tcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatagcattt 32093067  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     ||||||||||||| ||||||||||  ||| | |||||||||||||||||||||  ||| ||||| |||||    
T  32093068 cgtcccccaaaaattatataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttctgcct 32093138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 21739148 - 21739296
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21739148 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 21739247  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||  |||||||||| ||||||  |||| |||||||||    
T  21739248 tgtccctcaaaaattgtataaaacaaaaaattacacaatgccataaaaa 21739296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 553500 - 553345
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtc-c 117  Q
    ||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |    
T  553500 gacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 553401  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaa-atttgtcatgta 172  Q
    |||||||||| |||||||||  |||||||||||| |||||||| ||||||| ||||    
T  553400 cccaaaaatcgtataaaacataaaattattcaatgccataaaatatttgtcctgta 553345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 11963450 - 11963291
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11963450 gcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatagcattt 11963351  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| ||||||| |  |||||| ||||| |||| |||||||||||||||    
T  11963350 tgtccctcaaaaatcgtataaaatacaaaattactcaatgccataaaaaatttgtcatgt 11963291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 39918616 - 39918469
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  39918616 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 39918517  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||||||||| |||||||||  |||||| ||||||| ||||||    
T  39918516 tgtcccccaaaaatcgtataaaacataaaattactcaatactataaaa 39918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 2351783 - 2351641
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2351783 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 2351684  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
     |||||||| || ||||||| |||||| ||||| |||||||||    
T  2351683 tcaaaaatcgtacaaaacaaaaaattactcaatgccataaaaa 2351641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 182
Target Start/End: Original strand, 28090507 - 28090677
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  28090507 gcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaataacattt 28090606  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcc 182  Q
    |||||| |||||||| |||||||||| |||||| ||||||  || ||||||||||| ||||||||| ||||    
T  28090607 tgtccctcaaaaatcgtataaaacaaaaaattactcaataatataaaaaatttgtcctgtactgttctgcc 28090677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 5571631 - 5571800
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||  |    
T  5571631 gcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaaatagca--t 5571728  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  5571729 tgtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 5571800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 35701386 - 35701238
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  35701386 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcattt 35701287  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||| | |||||||||    
T  35701286 tgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaaaa 35701238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 22493407 - 22493553
Alignment:
Q  14 caaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt 113  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  22493407 caaaggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaatatcaaaatagcatttt 22493506  T
Q  114 gtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    || || |||||||| |||||||||| |||||| ||| | |||||||||    
T  22493507 gt-ccgcaaaaatcgtataaaacaaaaaattactcattgccataaaaa 22493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 24036339 - 24036183
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| || | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  24036339 gcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaataacattt 24036240  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||  ||||||||||| |||||||||| ||||||||||||  |  |||||||||||||||    
T  24036239 tgcaccccaaaaatcgtataaaacaaaaaattattcaatgtc--aaaaatttgtcatgt 24036183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 7725796 - 7725950
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  7725796 gcaagggacatgacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaatatccaaaatagcattt 7725895  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |||||||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  7725896 cgtcccccaaaaatcgtataaaacaaaaaattattcaattccataaaaatttgtc 7725950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 6284290 - 6284434
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacacc-aaaatagcattttgtc 116  Q
    ||||| |||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  6284290 ggacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtc 6284389  T
Q  117 ccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    || |||||||| |||||||||| |||||| ||||| |||||||||    
T  6284390 cctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 6284434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 7208232 - 7208364
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatc 127  Q
    |||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  7208232 aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatc 7208331  T
Q  128 atataaaacaagaaattattcaataccataaaa 160  Q
     |||||||||| |||||| ||||| ||||||||    
T  7208332 gtataaaacaaaaaattactcaatgccataaaa 7208364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 41790460 - 41790608
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| || |||||| ||||||||||||||||    
T  41790460 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtcccccaaa 41790559  T
Q  124 aatcatataaaacaagaaattattcaataccataaaa-atttgtcatgt 171  Q
    |||| |||||||||  |||||| ||||| |||||||| |||||||||||    
T  41790560 aatcgtataaaacataaaattactcaatgccataaaatatttgtcatgt 41790608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 29241463 - 29241316
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| |||||||| ||||||||    
T  29241463 atttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaac 29241364  T
Q  137 aagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    || |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  29241363 aaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 29241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 40489435 - 40489288
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | ||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||    
T  40489435 gacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtccctcaaa 40489336  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatg 170  Q
    |||  |||||||||| |||||| ||||| |||| ||||||||||||||    
T  40489335 aattgtataaaacaaaaaattactcaatgccataaaaaatttgtcatg 40489288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 4689685 - 4689843
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| || |||||| |||||    
T  4689685 gcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacattt 4689784  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     |  |||||||| || |||||||||| ||||||||||||  ||||||||||||||||||    
T  4689785 cgagccccaaaagtcgtataaaacaaaaaattattcaatgtcataaaaatttgtcatgt 4689843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 700593 - 700753
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    |||||| ||||||| | | |||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||  |||||||||    
T  700593 ggacaaaacaaaaattcatatttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaatattattttgtcc 700692  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaa-tttgtcatgtactgtt 177  Q
    ||| ||||||||||||||||| |||||| ||| | ||||||||| |||||||||| |||||    
T  700693 cccgaaaatcatataaaacaaaaaattactcattgccataaaaattttgtcatgtgctgtt 700753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 7770266 - 7770420
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||  | |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| || |||||| |||||    
T  7770266 gcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacattt 7770365  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
     |  ||||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  7770366 cgagccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 7770420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 41459697 - 41459555
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||| ||||||| | |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| | ||||||| |||||    
T  41459697 gcaagggacaaga-aaaaactcatatttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaatatcaaaataacattt 41459599  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat 156  Q
    |||||| |||||||| |||||||||| |||||| ||||| ||||    
T  41459598 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccat 41459555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 22432302 - 22432418
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||||||||| |||||    
T  22432302 gacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaaatagcatttcgtccc 22432401  T
Q  119 ccaaaaatcatataaaa 135  Q
    ||||||||| |||||||    
T  22432402 ccaaaaatcgtataaaa 22432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 5673248 - 5673106
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||     |||||||| | ||||||| |||||    
T  5673248 gcaagggacaagtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac-----gtctaaaatatcaaaataacattt 5673154  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||||||||| |||||||||| |||||| ||| | ||||||||    
T  5673153 tgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaa 5673106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 8136940 - 8136800
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||  |||||||    
T  8136940 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaataaca--ttgtccc 8136843  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    | ||||||  |||||||||| | |||| ||||| |||||||||    
T  8136842 caaaaaatagtataaaacaaaacattactcaatgccataaaaa 8136800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 23091291 - 23091446
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | |||||||||| ||| ||||||||| |||||||||||||| |||||| || |||||||||| | ||||||| |||||    
T  23091291 gcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaatatcaaaataacattt 23091390  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataa-aaatttgtc 167  Q
    |||||| |||||||| |||||||||| | |||| ||||| |||||| |||||||||    
T  23091391 tgtccctcaaaaatcgtataaaacaaaacattactcaatgccataagaaatttgtc 23091446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 37148632 - 37148727
Alignment:
Q  84 aagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttat 179  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  37148632 aagttgtctaaaacaccaaaatagcatttcgtcccccaaaaagaatataaaataagaaattattcaataccataaaaatttgtcctgtgctgttat 37148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 27839082 - 27839180
Alignment:
Q  35 aaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataa 133  Q
    |||||||||||||||||||||||| |  ||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||    
T  27839082 aaatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaatagccttttgtcctccaaaaatcgtataa 27839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 17031266 - 17031132
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||  ||||||||| ||||||  ||| |||| |||||||||| |||||||||||||||| | ||||| || |||||||| |||    
T  17031266 gcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagttatttaaaatacaaaaatagctttt 17031167  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattatt 147  Q
    ||||| | ||||||||||||| || | ||||||||    
T  17031166 tgtccacaaaaaatcatataagaccaaaaattatt 17031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 5598578 - 5598483
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccc 119  Q
    ||||||||| || |||||||||| ||| ||||| ||| |||||||||||||| ||||||||| |||||||||| | ||||||| ||||| ||||||    
T  5598578 gacaaaaacagatatttttgtccttcatcaaacaacagcacaactttttgtctcacgtacaacttgtctaaaatatcaaaataacatttcgtcccc 5598483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 6311647 - 6311794
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||| ||| |||||||||| |||||||||| |||||| | |||||| |||||||||| ||||||  ||||| |||||||||  ||||||||| | | |    
T  6311647 gcaaagaacatgacaaaaactaaaatttttgttcctcac-ataccacaacacaacttttagtcccaaatacaaattgtctaaattaccaaaataacctct 6311745  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||| |||||||   ||||| |||| | | | ||||||||||||||||    
T  6311746 tgtccaccaaaaaatttataagacaaaataatgttcaataccataaaaa 6311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 11090870 - 11090938
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 96  Q
    |||||||||||| ||| ||||||| || ||||  |||||||||||||| |||||||| |||||||||||    
T  11090870 aaaactgaaattcttgaccctcactaagccacgacacaactttttgtctcacgtacacgttgtctaaaa 11090938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 14011549 - 14011589
Alignment:
Q  129 tataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  14011549 tataaaacaagaaattgttcaataacataaaaatttgtcat 14011589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 29788489 - 29788601
Alignment:
Q  56 ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaatacca 155  Q
    ||||| |||||||||||| ||||||| |||||||||||||| |  |||||| |||||  ||  ||||||||  ||||| ||||  || ||||||||||||    
T  29788489 ccacaacacaactttttg-cccacgttcaagttgtctaaaatattaaaataacatttgatcaaccaaaaattgtataagacaa--aactattcaatacca 29788585  T
Q  156 taaaaatttgtcatgt 171  Q
    ||||| ||| ||||||    
T  29788586 taaaagtttatcatgt 29788601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 37148587 - 37148631
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaact 68  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||    
T  37148587 gacaaaaactgaaatttttgttcctcaccaaaccacggcacaact 37148631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 14011246 - 14011301
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgt 74  Q
    ||||| ||||||||  ||||||||||| ||||| |||| |||||||||||||||||    
T  14011246 gacaatacaaaaaccaaaatttttgtctctcactaaactacatcacaactttttgt 14011301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 36175076 - 36175109
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcac 51  Q
    |||||||||||||||||||||| |||||||||||    
T  36175076 ggacaagacaaaaactgaaattattgtccctcac 36175109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 20119775 - 20119709
Alignment:
Q  120 caaaaatcatataaaacaagaaa---ttattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||||||||  ||   ||||||||| | || |||||||||||||||||||| |||||    
T  20119775 caaaaatcatataaaacaaacaaatattattcaatgctattaaaatttgtcatgtactgttctgcct 20119709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 126; Significance: 3e-65; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 1630 - 1783
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1630 gcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatagcattt 1729  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgt 166  Q
     ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1730 cgtccctcaaaagtcatataaaacaaaaaattattcaataccataaaaatttgt 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 13685 - 13828
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  13685 gacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaacaccaaaatagcattccgtcccccaaa 13784  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  13785 aagcatataaaacaagaaattattcaataccataaaaatttgtc 13828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 42949 - 43088
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |    
T  42949 acaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa-ttgtctaaaacaccaaaatagcatgttgtccccaaaca 43047  T
Q  125 atcatataaaacaagaaattattcaataccataaaaatttg 165  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  43048 atcatataaaacaagaaattattcaataccacaaaaatttg 43088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 8e-54; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 10960109 - 10959951
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  10960109 gcaagggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattt 10960010  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||||||||||| |||||||||| | || ||||||| |||||||||||||||||||    
T  10960009 tgtcccccaaaaatcgtataaaacaaaatatcattcaatgccataaaaatttgtcatgt 10959951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 31870120 - 31870278
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| || ||||||||||||    
T  31870120 gcaagggacaaaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaatagcattt 31870219  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
     ||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  31870220 cgtcccccaaaactcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgt 31870278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 10485260 - 10485112
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  10485260 gacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccc 10485161  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    ||||||||| |||||||||| ||||||||||||  |||||| |||||||    
T  10485160 ccaaaaatcgtataaaacaaaaaattattcaatgtcataaatatttgtc 10485112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 2615005 - 2614846
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2615005 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 2614906  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||| |||||||| ||||||| || |||||| ||||| |||| |||||||||||||||    
T  2614905 tgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgt 2614846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 18597178 - 18597329
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||| | ||    
T  18597178 gcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaacgctaaaatagtactt 18597277  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaattt 164  Q
     ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  18597278 cgtccctcaaaaatcatataaaacaaaaaattattcaataccataaaaattt 18597329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 24242761 - 24242602
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24242761 acaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaa 24242662  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||| |||||||||| |||||| |||||  ||| ||||||||||| ||| ||||| |||||    
T  24242661 atcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgcct 24242602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 32132400 - 32132571
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  32132400 gcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 32132499  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||||||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  32132500 tgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 32132571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 3932838 - 3932992
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  3932838 gacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaa 3932937  T
Q  124 aatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||| ||| |||||    
T  3932938 aatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgtt 3932992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 32409877 - 32410043
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||    
T  32409877 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtcc 32409976  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    | |||||||| |||||||||| ||||||||||||  ||| ||||||||||||||| ||||| |||||    
T  32409977 ctcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgctgttctgcct 32410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 3259786 - 3259633
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  3259786 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 3259687  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
     |||||||| |||||||||| |||||| ||||| |||| |||||||||||||||    
T  3259686 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgt 3259633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 166955 - 167114
Alignment:
Q  25 acaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaa 124  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||    
T  166955 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtcccttaaaa 167054  T
Q  125 atcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||||||| |||||| |||||  ||| ||||||||||||||| ||||| |||||    
T  167055 atcatataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgcct 167114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 15276957 - 15277104
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  15276957 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttgtctaaaagaacaaaatagcattt 15277056  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    |||||| |||||||| |||||||||| |||||| ||||| ||||||||    
T  15277057 tgtccctcaaaaatcttataaaacaaaaaattactcaatgccataaaa 15277104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 17443371 - 17443201
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17443371 gcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 17443272  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     |||| ||||||||| |||||||||  ||||||||||||  |||| ||||||||| ||| |||||||||||    
T  17443271 cgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgcct 17443201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 11613822 - 11613959
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  11613822 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccctcaaa 11613921  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  11613922 aatcgtataaaacaaaaaattactcaatgccataaaaa 11613959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 10324131 - 10324279
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  10324131 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 10324230  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||| ||||||| |||||||||| |||||| ||||| |||||||||    
T  10324231 tgtccccaaaaaatcgtataaaacaaaaaattactcaatcccataaaaa 10324279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 15277300 - 15277448
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  15277300 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattt 15277399  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||  ||||||||| |||||||||| |||||| ||||| | |||||||    
T  15277400 tgtcttccaaaaatcgtataaaacaacaaattactcaatgctataaaaa 15277448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 17867944 - 17867796
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17867944 gcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattt 17867845  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  17867844 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 17867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 17877727 - 17877579
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17877727 gcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattt 17877628  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  17877627 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 17877579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 14925481 - 14925646
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||    
T  14925481 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaataccaaaatagcattccgtcc 14925580  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    || ||||||| |||||||||  ||||||||||||  |||| ||||||||| ||| |||||||||||    
T  14925581 cctaaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgcct 14925646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 18057623 - 18057458
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18057623 ggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtcc 18057524  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     | ||||||| |||||||||  ||||||||||||  |||| ||||||||| ||| || ||||||||    
T  18057523 tctaaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctattatgcct 18057458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 34176933 - 34176774
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | ||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34176933 gacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtccc 34176834  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
     |||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| |||||    
T  34176833 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgtt 34176774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 24203465 - 24203301
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24203465 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 24203366  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
     | |||||  |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  24203365 tc-aaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttttgcct 24203301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 9902683 - 9902841
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  9902683 ggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtcc 9902782  T
Q  118 cccaaaaatcatataaaacaagaa-attattcaataccataaaaatttgtcatgtactg 175  Q
    ||||||||||||||||| ||| ||  |||||||||   ||||||| |||| ||||||||    
T  9902783 cccaaaaatcatataaaccaaaaattttattcaatgttataaaaaattgttatgtactg 9902841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 11279232 - 11279090
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| |||    
T  11279232 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttatcc 11279133  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    | ||||||||  ||||||||| |||||| ||||  ||||||||    
T  11279132 ctcaaaaatcgaataaaacaaaaaattactcaaggccataaaa 11279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 29054466 - 29054319
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    ||||| ||||| ||||||||||  |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||| ||||    
T  29054466 agcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaata-caaaataacatt 29054368  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    | ||| |||||||||||||||| |||  |||||||||||||||||||||    
T  29054367 tcgtcacccaaaaatcatataatacagaaaattattcaataccataaaa 29054319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 3290779 - 3290643
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||| ||||||||||| |||||||||||  |||||||| ||||||||||||| |||||||||||||||    
T  3290779 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaacttttt--cccacgtataagttgtctaaaataccaaaatagcattt 3290682  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaat 151  Q
    |||||| |||||||||||||||||||  |||||||||||    
T  3290681 tgtccctcaaaaatcatataaaacaaacaattattcaat 3290643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 11382171 - 11382040
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  11382171 gcaagggacaggacaaaaactcatatttttgtc--tcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 11382074  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattat 146  Q
    |||||| |||||||| |||||||||| |||||||    
T  11382073 tgtccctcaaaaatcgtataaaacaaaaaattat 11382040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 3379813 - 3379656
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||| ||| |||||||||||| ||| ||||||||||||||| ||||     
T  3379813 gacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaataccaaaatagcatttcgtcct 3379714  T
Q  119 ccaaaaatcatataaaac-aagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||||||||||||||||| || ||||| |||||| |  | |||||||| |||||||||||    
T  3379713 ccaaaaatcatataaaacaaaaaaattgttcaatgc--ttaaaatttgacatgtactgtt 3379656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 8177916 - 8178067
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatc 127  Q
    |||| ||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||    
T  8177916 aaaaatgatatttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaataacatttcgtcccccaaaaatc 8178015  T
Q  128 atataaaac--aagaaattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||||||||  || ||| | |||||| | || |||| |||||||||||||||    
T  8178016 atataaaacaaaaaaaaatgttcaatgctattaaaacttgtcatgtactgtt 8178067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 32860160 - 32859990
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| ||||||| ||| ||||||||||| || |||||||||| |||||| ||||||| |||||||||||| ||||||| || |||||| |||||    
T  32860160 gcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcacgtacaagttttctaaaatacaaaaataacattt 32860061  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
     ||| ||||||||||| |||| |||  |||||||||||||||||||||||||||  ||| ||||| |||||    
T  32860060 cgtcacccaaaaatcaaataatacagaaaattattcaataccataaaaatttgtattgtgctgttctgcct 32859990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 34684005 - 34684136
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtct-aaaacaccaaaatagcatt 111  Q
    |||| ||||| |||||||||| |  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  34684005 gcaagggacacgacaaaaactca--tttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaataccaaaatagcatt 34684102  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaatta 145  Q
    |||||| ||||||||| |||||||||| ||||||    
T  34684103 ttgtcctccaaaaatcgtataaaacaaaaaatta 34684136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 14808035 - 14808174
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||  ||||||||| |||||  ||||||||||||    
T  14808035 aaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtct-aagtaccaaaataacatttcatcccccaaaaat 14808133  T
Q  127 catataaaacaagaaattattcaataccataaaaatttgtc 167  Q
    | |||||||| | |||||||||||| |||||||||||||||    
T  14808134 cgtataaaactaaaaattattcaattccataaaaatttgtc 14808174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 11675394 - 11675553
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| | ||||||||||| ||||||||||||| | | ||||| ||| |||| |||| |    
T  11675394 gcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactttttatcccacgtacaagctttgtaaaatacctaaatggcatct 11675493  T
Q  113 tgtcccccaaaaatcatataaaac-aagaaattattcaataccataaaaatttgtcatgt 171  Q
     |||||||||||||| |||||||| || |||||||||||| | ||| |||||||||||||    
T  11675494 cgtcccccaaaaatcgtataaaacaaaaaaattattcaatgctatagaaatttgtcatgt 11675553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 11212361 - 11212195
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | | |||||||||||||||||||||| || ||| ||||||| ||||| |||||||||||||| ||||||||| ||||||||||    
T  11212361 ggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtcc 11212262  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccataaaa-atttgtcatgtactgttatgcct 183  Q
    | ||||||||  ||||||||| |||||| ||||  |||||||| ||||||| ||| ||||| |||||    
T  11212261 ctcaaaaatcgaataaaacaaaaaattactcaaggccataaaacatttgtcctgtgctgttctgcct 11212195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 27824698 - 27824834
Alignment:
Q  41 ttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaaga 140  Q
    ||||||||||  | ||||||||||||||||||||||||||||| |||| || |||| || |||||||| ||||||||  |||||||||||||| |  | |    
T  27824698 ttgtccctcattataccacatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtccaacaaaaatcatataagatcaaa 27824797  T
Q  141 aattattcaataccataaaaatttgtcatgtactgtt 177  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  27824798 aattattcaataccataaaagtttgtcatgtattgtt 27824834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 4494149 - 4494248
Alignment:
Q  27 aaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaat 126  Q
    ||||||| | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||    
T  4494149 aaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtccccaaaaaat 4494248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 7396145 - 7396301
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 111  Q
    ||||| ||||| ||||||||| ||||| || ||||||||| |||||||  |||||||||||||| |||||||||||| ||||||| || |||||||  ||    
T  7396145 agcaatggacaggacaaaaacagaaatctt-gtccctcactaaaccactacacaactttttgtctcacgtacaagttatctaaaatacaaaaatagtgtt 7396243  T
Q  112 ttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||||  |||||||  ||| | |||  ||||||||||||||||||||||||||||||||    
T  7396244 ttgtccatcaaaaatggtatgagaca--aaattattcaataccataaaaatttgtcatgt 7396301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 23636292 - 23636162
Alignment:
Q  53 aaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaata 152  Q
    |||||||| ||||| |||||||| |||||||||||| | |||||  |||||||||||||| ||||||| |||||  |||||||||| ||||||||||||     
T  23636292 aaaccacaacacaaatttttgtctcacgtacaagttatttaaaaatccaaaatagcatttcgtccccccaaaattgtataaaacaaaaaattattcaatg 23636193  T
Q  153 ccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||||||  |||||||||| ||| |||||    
T  23636192 ccataaaaaactgtcatgtacagttctgcct 23636162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 35004154 - 35004306
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    ||||||||||||||| || |||||||| ||||   ||||||| ||||||| ||||||||||||||||||| ||||||| | ||||||||  |||||||      
T  35004154 gacaagacaaaaactaaattttttgtctctcatataaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtcaa 35004253  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
      ||||||  ||||| || | ||| ||||||||| ||||||| ||||| ||||    
T  35004254 taaaaaattgtataataccaaaaactattcaatatcataaaagtttgttatgt 35004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 29202990 - 29203104
Alignment:
Q  56 ccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaatacca 155  Q
    ||||| ||||||||||| || || ||||||||||| ||||| ||||||  |||||||||||| | |||| |||||||| ||||  |||| ||||||| ||    
T  29202990 ccacaacacaactttttctctcaagtacaagttgtttaaaataccaaag-agcattttgtccacaaaaattcatataagacaaataattgttcaatatca 29203088  T
Q  156 taaaaatttgtcatgt 171  Q
    ||||||||||||||||    
T  29203089 taaaaatttgtcatgt 29203104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 9200414 - 9200493
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaaca 98  Q
    ||||||||||||||  ||||| || ||||||||||||||| || ||||||||||||||||| ||||| |||| |||||||    
T  9200414 gacaagacaaaaacaaaaattcttctccctcaccaaaccatataacaactttttgtcccacatacaaattgtttaaaaca 9200493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 29424613 - 29424734
Alignment:
Q  39 ttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaa 138  Q
    |||||||| |||| |||| ||| ||||| |||| | || ||||||||||| ||||||| || |||||||  |||||||| ||||||| | || || || |    
T  29424613 ttttgtccatcactaaacgacaacacaatttttagacctacgtacaagttatctaaaatacaaaaatagttttttgtccaccaaaaaacgtacaagacca 29424712  T
Q  139 gaaattattcaataccataaaa 160  Q
     |||||||||||||||||||||    
T  29424713 aaaattattcaataccataaaa 29424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 9614083 - 9613928
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||  |||| |||||||  ||||| ||||| || ||||| ||||||| ||||||| ||||||||||||| || ||||||   ||     
T  9614083 gcaagggacatgacaaaatttgaagtttttgttactcactaaaccgcaacacaattttttgttccacgtataagttgtctaaaatactaaaataatcttc 9613984  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaa-taccataaaaatttgtc 167  Q
    ||||| | || |||||||||| || | |||||||||||  ||||||||| ||||||    
T  9613983 tgtccacaaataatcatataacaccaaaaattattcaacaaccataaaattttgtc 9613928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 5650735 - 5650880
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    ||||||||||||||||||||| |||||| ||| || | |||||| ||| ||| ||| || || |||   |||| |||||| |||| |||||||| ||| |    
T  5650735 gacaaaaactgaaatttttgttcctcactaaatcatagcacaacatttggtctcacatataaattgcgcaaaataccaaagtagctttttgtccaccaca 5650834  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcat 169  Q
    |||  || || |  |||||| ||||||||||| |||||||||||||    
T  5650835 aattgtacaagatcagaaatcattcaataccacaaaaatttgtcat 5650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 29814887 - 29814826
Alignment:
Q  100 caaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    ||||||| |||||||||||||||||||| |||||||||| | |||| ||||| |||||||||    
T  29814887 caaaataacattttgtcccccaaaaatcgtataaaacaaaacattactcaatgccataaaaa 29814826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 13412710 - 13412649
Alignment:
Q  110 ttttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    |||||||| | ||||||||||||| |  | |||||||||||||| |||||||||||||||||    
T  13412710 ttttgtccacaaaaaatcatataagatgaaaaattattcaatactataaaaatttgtcatgt 13412649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 27756370 - 27756314
Alignment:
Q  57 cacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttt 113  Q
    |||| |||||||||||||||| |||| ||||||||||||| | ||||||| ||||||    
T  27756370 cacaacacaactttttgtcccccgtataagttgtctaaaatatcaaaataacatttt 27756314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 7365446 - 7365347
Alignment:
Q  63 acaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaat 162  Q
    ||||||||||||| ||| || || |||||||||| | ||||||||   ||||||| | ||||||  ||||| || | |||||||| ||||||||||||||    
T  7365446 acaactttttgtcacacataaaaattgtctaaaatatcaaaatagtcatttgtccgcaaaaaatggtataagactaaaaattatttaataccataaaaat 7365347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 13415820 - 13415781
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcc 76  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  13415820 atttttgtccctcactaaaccacatcgcaactttttgtcc 13415781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24785164 - 24785105
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaacttttt 72  Q
    |||| ||||| |||||||||||||||| ||||| ||||| |||||||| ||||| |||||    
T  24785164 gcaagggacatgacaaaaactgaaattcttgtcgctcactaaaccacaacacaatttttt 24785105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 28502482 - 28502431
Alignment:
Q  100 caaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaat 151  Q
    ||||||| |||||||||||||||||||| |||||||||| | |||| |||||    
T  28502482 caaaataacattttgtcccccaaaaatcgtataaaacaaaacattactcaat 28502431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 8342639 - 8342761
Alignment:
Q  39 ttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaac-accaaaatagcattttgtcccccaaaaatcatataaaaca 137  Q
    ||||||| ||||  |||||||| |||||||||||||||  | || ||||| | |||||  || |||||||  |||||||| | ||||||||||||| ||     
T  8342639 ttttgtcactcaataaaccacaacacaactttttgtcctgcatagaagttatttaaaaatacaaaaatagttttttgtccactaaaaatcatataagacc 8342738  T
Q  138 agaaattattcaataccataaaa 160  Q
      || ||||||||||||||||||    
T  8342739 gcaatttattcaataccataaaa 8342761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 16542362 - 16542440
Alignment:
Q  80 gtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataa 158  Q
    ||||||||||||||||| ||||||||| | |||| | |  |||||||  ||||| | || |||||||||||||||||||    
T  16542362 gtacaagttgtctaaaataccaaaataaccttttatgcaacaaaaattgtataagataaaaaattattcaataccataa 16542440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 32614046 - 32614128
Alignment:
Q  101 aaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    |||||| | |||||||| ||||||||| ||||| || | |||||||  |||||||||||| |||||||| |  ||||||||||    
T  32614046 aaaataactttttgtccaccaaaaatcgtataagaccaaaaattatataataccataaaagtttgtcatatgttgttatgcct 32614128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 102058 - 101893
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  102058 gcaacggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 101959  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    ||||||  ||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| |||||    
T  101958 tgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgtt 101893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 102; Significance: 7e-51; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 18041 - 18206
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18041 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 18140  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| ||||| | || ||||||||||| ||| |||||    
T  18141 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgtt 18206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 12528 - 12688
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12528 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 12627  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    | |||||||| |||||||||| |||||| ||||| | || ||||||||||| ||| |||||    
T  12628 ctcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgtt 12688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 2325 - 2496
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  2325 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagttttt 2424  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    ||||||  ||||||| |||||||||| |||||| |||||  ||| ||||||||||||||| ||||| |||||    
T  2425 tgtcccataaaaatcctataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgcct 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 15281 - 15135
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||| ||||    
T  15281 gcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtattt 15182  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaa 159  Q
    ||||||||||||||| |||||||||| |||||| ||||| |||||||    
T  15181 tgtcccccaaaaatcttataaaacaacaaattactcaatgccataaa 15135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 51547 - 51383
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| |||||||||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  51547 gcaagggacaagacaaaaactcatatttttgtccctcac-aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 51449  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
    |||||| |||||||| |||||||||| |||||| |||||  ||| ||||||||||| ||| |||||    
T  51448 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcttgtgctgtt 51383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 372962 - 373099
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  372962 gacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtccctcaaa 373061  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| ||||| |||||||||    
T  373062 aatcgtataaaacaaaaaattactcaatgccataaaaa 373099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 4566 - 4737
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  4566 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattt 4665  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgttatgcct 183  Q
    |||| |  ||||||| |||||||||| |||||| ||||| |||| ||||||||||| ||| ||||| |||||    
T  4666 tgtctctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgcct 4737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 19092 - 19242
Alignment:
Q  28 aaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatc 127  Q
    |||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||    
T  19092 aaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatc 19191  T
Q  128 atataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgtt 177  Q
     |||||||||| |||||| ||||| |||| ||||||||| ||||| |||||    
T  19192 gtataaaacaaaaaattactcaatgccataaaaaatttgccatgtgctgtt 19242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 37 - 183
Target Start/End: Original strand, 5451 - 5597
Alignment:
Q  37 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaac 136  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||| ||||| |  ||||||||||| ||||||||    
T  5451 atttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 5550  T
Q  137 aagaaattattcaataccataaaaatttgtcatgtactgttatgcct 183  Q
    || ||||||||||||  |||||||||||||| ||| ||||| |||||    
T  5551 aaaaaattattcaatgtcataaaaatttgtcctgtgctgttctgcct 5597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 23684 - 23538
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  |    
T  23684 gcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca--t 23587  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||||| |||||||| |||||||||| |||||| ||||| |||||||||    
T  23586 tgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa 23538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 20005 - 19858
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||||||||| ||||| ||||| |||||||   ||||||||||||  |||||||||||||| | ||| ||||||||||  |||||| |  ||||    
T  20005 gacaaaaactgaaattcttgtcactcactaaaccactgtacaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaa 19906  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 171  Q
    ||||  ||||  | | | ||||||||||||||||||| ||||||||||    
T  19905 aatcgcataacgccaaatattattcaataccataaaagtttgtcatgt 19858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 2488 - 2641
Alignment:
Q  18 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcc 117  Q
    ||||| |||||||||| | || ||||||||| ||||||||||| ||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||    
T  2488 ggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaactatt-gtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 2586  T
Q  118 cccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgt 171  Q
    |||||||||| |||||||||| ||||||  ||||  ||| |||||||||||||||    
T  2587 cccaaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgt 2641  T

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Target: scaffold0360 (Bit Score: 77; Significance: 6e-36; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 15379 - 15512
Alignment:
Q  24 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtcccccaaa 123  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||    || ||||    
T  15379 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattt----cctcaaa 15474  T
Q  124 aatcatataaaacaagaaattattcaataccataaaaa 161  Q
    |||| |||||||||| |||||| |||||  ||||||||    
T  15475 aatcgtataaaacaaaaaattactcaatgtcataaaaa 15512  T

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Target: scaffold0360; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 13572 - 13686
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||| |||||||| |||||||| |||| ||||| |||  ||  |||||||||||||| || |||||||||||||| || |||||||||| |||||||||     
T  13572 gacatgacaaaaattgaaatttgtgtctctcactaaaatacgacacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtcca 13671  T
Q  119 ccaaaaatcatataa 133  Q
     |||||||| |||||    
T  13672 tcaaaaatcgtataa 13686  T

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Target: scaffold0155 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 33532 - 33678
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattt 112  Q
    |||| ||||| |||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||  |||    
T  33532 gcaagggacatgacaaaaa-tgaaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttt 33630  T
Q  113 tgtcccccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    |||||  ||||| |  ||||| || | ||||||||||||| |||||||    
T  33631 tgtccatcaaaacttgtataagaccaaaaattattcaatatcataaaa 33678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 7455 - 7608
Alignment:
Q  23 agacaaaaactgaaatttttgtccctcaccaaaccacatcacaac---tttttgtcccacgtacaagttgtctaaaacaccaaaatag-cattttgtccc 118  Q
    ||||||||||||||||| ||||| ||||| ||| |||| |||||    |||||||| ||||||| |||||||||||| ||||||||||   ||||||||     
T  7455 agacaaaaactgaaattcttgtctctcactaaatcacaacacaagatttttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtcca 7554  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgta 172  Q
      |||||| |||||| || | |||||||||||||| |||||| |||||| ||||    
T  7555 ttaaaaattatataagaccaaaaattattcaatactataaaagtttgtcttgta 7608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 3683 - 3776
Alignment:
Q  81 tacaagttgtctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtact 174  Q
    |||||||| ||||||| || |||||||  |||| ||| ||||||||||||||| | || ||||||||||||| ||||||| |||||||||||||    
T  3683 tacaagttatctaaaatacaaaaatagttttttatccaccaaaaatcatataagataaaaaattattcaatatcataaaagtttgtcatgtact 3776  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 111068 - 111206
Alignment:
Q  19 gacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcattttgtccc 118  Q
    |||||||||||||||||||||||||||  |||| ||| ||||  | ||||||||||| || || ||| || ||||||  ||||||||| |   || |||     
T  111068 gacaagacaaaaactgaaatttttgtcattcactaaagcacaatagaactttttgtctcaagtgcaaattatctaaagtaccaaaataac---ttatcca 111164  T
Q  119 ccaaaaatcatataaaacaagaaattattcaataccataaaa 160  Q
    ||||||||| ||||| |||  ||||||||||||| |||||||    
T  111165 ccaaaaatcgtataagacataaaattattcaatatcataaaa 111206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 19143 - 19205
Alignment:
Q  13 gcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtc 75  Q
    |||| ||||| ||||||||||||||||||||||||||| |||| | || ||||||||||||||    
T  19143 gcaatggacaggacaaaaactgaaatttttgtccctcatcaaagctcaacacaactttttgtc 19205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 3169 - 3223
Alignment:
Q  12 agcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaa 66  Q
    ||||||||  |||||||||| ||||||| ||||| ||||| ||||||||||||||    
T  3169 agcaaaggggaagacaaaaaatgaaattattgtctctcacaaaaccacatcacaa 3223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 13292 - 13256
Alignment:
Q  121 aaaaatcatataaaacaagaaattattcaataccata 157  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  13292 aaaaatcatataaaacaacaaattattcaatatcata 13256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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