View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10579_high_25 (Length: 248)

Name: NF10579_high_25
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10579_high_25
NF10579_high_25
[»] chr1 (38 HSPs)
chr1 (3-248)||(38627176-38627419)
chr1 (172-242)||(25130805-25130875)
chr1 (172-242)||(26501397-26501467)
chr1 (172-245)||(3977566-3977639)
chr1 (190-238)||(3100548-3100596)
chr1 (202-242)||(9011747-9011787)
chr1 (202-243)||(6829714-6829755)
chr1 (193-242)||(25995562-25995611)
chr1 (193-242)||(47059810-47059859)
chr1 (202-242)||(13813660-13813700)
chr1 (202-242)||(42843273-42843313)
chr1 (184-235)||(32640327-32640377)
chr1 (201-243)||(2827638-2827680)
chr1 (212-242)||(7371887-7371917)
chr1 (158-243)||(13078939-13079022)
chr1 (196-238)||(17526526-17526568)
chr1 (212-242)||(19920864-19920894)
chr1 (212-242)||(25239176-25239206)
chr1 (184-242)||(26760664-26760722)
chr1 (212-242)||(29362631-29362661)
chr1 (172-242)||(29489258-29489328)
chr1 (172-242)||(37947119-37947189)
chr1 (213-242)||(5959490-5959519)
chr1 (159-243)||(7420735-7420817)
chr1 (212-245)||(8934473-8934506)
chr1 (193-242)||(21255705-21255754)
chr1 (193-242)||(32966369-32966418)
chr1 (193-242)||(34941840-34941889)
chr1 (203-248)||(36037661-36037706)
chr1 (202-243)||(50777352-50777393)
chr1 (193-242)||(51168688-51168737)
chr1 (213-245)||(7423113-7423145)
chr1 (202-238)||(36669299-36669335)
chr1 (202-242)||(36930685-36930725)
chr1 (193-237)||(40605341-40605385)
chr1 (202-238)||(42299117-42299153)
chr1 (193-245)||(43853355-43853407)
chr1 (202-242)||(49621463-49621503)
[»] chr3 (41 HSPs)
chr3 (172-242)||(30633713-30633783)
chr3 (159-240)||(47683894-47683973)
chr3 (202-242)||(30400085-30400125)
chr3 (172-238)||(44855357-44855423)
chr3 (172-242)||(50279986-50280056)
chr3 (193-242)||(1031347-1031396)
chr3 (205-242)||(3069507-3069544)
chr3 (202-242)||(11574656-11574696)
chr3 (202-242)||(13159763-13159803)
chr3 (202-242)||(20714345-20714385)
chr3 (202-242)||(32931847-32931887)
chr3 (202-242)||(36819058-36819098)
chr3 (183-243)||(46323025-46323085)
chr3 (186-238)||(50657344-50657396)
chr3 (202-242)||(54233430-54233470)
chr3 (172-243)||(11327209-11327280)
chr3 (212-243)||(34021402-34021433)
chr3 (184-243)||(43460489-43460548)
chr3 (193-243)||(21481865-21481915)
chr3 (172-242)||(35756082-35756152)
chr3 (189-243)||(37585532-37585586)
chr3 (157-242)||(43149229-43149312)
chr3 (213-243)||(44910805-44910835)
chr3 (213-242)||(23906927-23906956)
chr3 (209-242)||(28263647-28263680)
chr3 (213-242)||(28884582-28884611)
chr3 (193-242)||(35376471-35376520)
chr3 (214-243)||(42864975-42865004)
chr3 (193-242)||(44127112-44127161)
chr3 (172-241)||(49114499-49114568)
chr3 (213-242)||(50652490-50652519)
chr3 (215-243)||(7039173-7039201)
chr3 (159-242)||(9027715-9027796)
chr3 (202-242)||(9582088-9582128)
chr3 (193-245)||(26021979-26022031)
chr3 (203-243)||(37710505-37710545)
chr3 (202-242)||(41717365-41717405)
chr3 (202-242)||(43409294-43409334)
chr3 (202-238)||(46344520-46344556)
chr3 (160-243)||(49031436-49031516)
chr3 (202-242)||(53102831-53102871)
[»] chr8 (34 HSPs)
chr8 (159-248)||(33511697-33511784)
chr8 (155-243)||(13540793-13540879)
chr8 (155-243)||(13683594-13683680)
chr8 (174-238)||(5924916-5924980)
chr8 (174-238)||(5925161-5925225)
chr8 (172-242)||(6825176-6825246)
chr8 (202-248)||(7602960-7603006)
chr8 (172-242)||(30927830-30927900)
chr8 (172-242)||(37562040-37562110)
chr8 (202-242)||(2597089-2597129)
chr8 (202-242)||(33817259-33817299)
chr8 (184-235)||(23138706-23138756)
chr8 (203-242)||(41273617-41273656)
chr8 (172-242)||(14531723-14531793)
chr8 (172-242)||(19723105-19723175)
chr8 (213-243)||(20994998-20995028)
chr8 (212-242)||(32185605-32185635)
chr8 (193-247)||(32234372-32234426)
chr8 (209-243)||(36015658-36015692)
chr8 (212-242)||(41293660-41293690)
chr8 (213-243)||(43605609-43605639)
chr8 (193-242)||(5359440-5359489)
chr8 (212-241)||(7129636-7129665)
chr8 (205-242)||(13267018-13267055)
chr8 (205-242)||(39258987-39259024)
chr8 (202-243)||(39359837-39359878)
chr8 (202-242)||(6656268-6656308)
chr8 (202-242)||(6736670-6736710)
chr8 (174-238)||(10344434-10344498)
chr8 (202-242)||(13884418-13884458)
chr8 (202-242)||(14228795-14228835)
chr8 (202-242)||(20895923-20895963)
chr8 (202-238)||(35937441-35937477)
chr8 (205-237)||(36178195-36178227)
[»] chr5 (30 HSPs)
chr5 (202-243)||(25345439-25345480)
chr5 (172-242)||(12401294-12401364)
chr5 (202-242)||(9596743-9596783)
chr5 (202-242)||(12512895-12512935)
chr5 (202-242)||(17489450-17489490)
chr5 (193-243)||(41210434-41210484)
chr5 (202-242)||(9594580-9594620)
chr5 (202-242)||(15622146-15622186)
chr5 (209-245)||(15917962-15917998)
chr5 (202-242)||(22920421-22920461)
chr5 (202-242)||(28501719-28501759)
chr5 (202-242)||(33823623-33823663)
chr5 (172-243)||(35616700-35616771)
chr5 (213-243)||(1760462-1760492)
chr5 (212-242)||(2051028-2051058)
chr5 (212-242)||(7080616-7080646)
chr5 (212-242)||(19271961-19271991)
chr5 (212-242)||(30574316-30574346)
chr5 (193-243)||(31625996-31626046)
chr5 (215-248)||(10315343-10315376)
chr5 (174-239)||(16143602-16143667)
chr5 (202-243)||(22653740-22653781)
chr5 (202-238)||(3263437-3263473)
chr5 (202-242)||(4954568-4954608)
chr5 (202-242)||(8959262-8959302)
chr5 (202-238)||(10522881-10522917)
chr5 (202-242)||(11464052-11464092)
chr5 (202-242)||(11880916-11880956)
chr5 (213-241)||(22203810-22203838)
chr5 (202-242)||(38010974-38011014)
[»] chr4 (38 HSPs)
chr4 (174-242)||(32365568-32365636)
chr4 (172-242)||(2193708-2193778)
chr4 (172-242)||(53384241-53384310)
chr4 (189-242)||(25936342-25936395)
chr4 (159-239)||(34259931-34260009)
chr4 (202-242)||(31221515-31221555)
chr4 (196-242)||(18634803-18634849)
chr4 (172-242)||(24235422-24235492)
chr4 (172-242)||(44368101-44368171)
chr4 (176-242)||(46480409-46480475)
chr4 (181-238)||(50383104-50383161)
chr4 (202-242)||(3223091-3223131)
chr4 (202-242)||(5208256-5208296)
chr4 (202-242)||(20056484-20056524)
chr4 (202-242)||(27001338-27001378)
chr4 (202-242)||(32901431-32901471)
chr4 (202-242)||(47106013-47106053)
chr4 (202-242)||(51377222-51377262)
chr4 (188-243)||(6686147-6686202)
chr4 (172-242)||(7037383-7037453)
chr4 (212-242)||(8026703-8026733)
chr4 (212-242)||(13267417-13267447)
chr4 (189-243)||(25241793-25241847)
chr4 (197-243)||(31318849-31318895)
chr4 (213-243)||(36364725-36364755)
chr4 (212-242)||(41495115-41495145)
chr4 (172-242)||(52669508-52669578)
chr4 (193-242)||(5234391-5234440)
chr4 (202-243)||(8456004-8456045)
chr4 (193-242)||(18874844-18874893)
chr4 (154-242)||(22893970-22894056)
chr4 (154-242)||(22945638-22945724)
chr4 (193-242)||(33860466-33860515)
chr4 (193-242)||(43982999-43983048)
chr4 (202-243)||(44272741-44272782)
chr4 (202-242)||(15638232-15638272)
chr4 (202-242)||(33484035-33484075)
chr4 (209-245)||(37732048-37732084)
[»] scaffold0193 (1 HSPs)
scaffold0193 (172-242)||(24775-24845)
[»] chr2 (32 HSPs)
chr2 (193-243)||(24491597-24491647)
chr2 (183-248)||(32755774-32755839)
chr2 (202-242)||(27307174-27307214)
chr2 (176-242)||(3299008-3299074)
chr2 (172-242)||(37966458-37966528)
chr2 (172-242)||(44484555-44484625)
chr2 (159-243)||(42141498-42141580)
chr2 (174-242)||(17826149-17826217)
chr2 (202-242)||(23048012-23048052)
chr2 (191-247)||(31009664-31009720)
chr2 (202-242)||(36383564-36383604)
chr2 (212-243)||(4432428-4432459)
chr2 (202-237)||(34144481-34144516)
chr2 (184-235)||(41749579-41749629)
chr2 (212-242)||(5962740-5962770)
chr2 (193-243)||(16463393-16463443)
chr2 (212-242)||(30487391-30487421)
chr2 (212-242)||(36909782-36909812)
chr2 (193-242)||(6365288-6365337)
chr2 (193-238)||(6742330-6742375)
chr2 (215-248)||(14957688-14957721)
chr2 (193-238)||(20974460-20974505)
chr2 (209-242)||(33857319-33857352)
chr2 (159-243)||(35518376-35518458)
chr2 (214-243)||(37109313-37109342)
chr2 (193-242)||(37631287-37631336)
chr2 (191-243)||(1277832-1277884)
chr2 (159-242)||(8757646-8757727)
chr2 (215-247)||(9377700-9377732)
chr2 (202-242)||(29893712-29893752)
chr2 (202-242)||(38246680-38246720)
chr2 (202-242)||(38572041-38572081)
[»] chr6 (17 HSPs)
chr6 (203-247)||(24881708-24881752)
chr6 (172-243)||(3339398-3339469)
chr6 (193-238)||(9188866-9188911)
chr6 (202-242)||(1803971-1804011)
chr6 (172-243)||(27334965-27335036)
chr6 (172-243)||(27395705-27395776)
chr6 (184-230)||(363527-363572)
chr6 (193-243)||(7304025-7304075)
chr6 (212-242)||(17902631-17902661)
chr6 (193-242)||(23653813-23653862)
chr6 (184-236)||(1604675-1604726)
chr6 (202-242)||(2056885-2056925)
chr6 (202-242)||(3660282-3660322)
chr6 (202-242)||(6435138-6435178)
chr6 (202-242)||(11017484-11017524)
chr6 (202-242)||(16743195-16743235)
chr6 (203-239)||(33491843-33491879)
[»] scaffold0016 (1 HSPs)
scaffold0016 (188-243)||(204362-204417)
[»] chr7 (30 HSPs)
chr7 (172-243)||(30201360-30201431)
chr7 (172-242)||(26041412-26041482)
chr7 (172-242)||(44511241-44511311)
chr7 (172-242)||(48057396-48057466)
chr7 (174-243)||(37149376-37149445)
chr7 (158-242)||(42431825-42431907)
chr7 (159-238)||(43255455-43255532)
chr7 (202-242)||(44175647-44175687)
chr7 (183-247)||(49014309-49014373)
chr7 (202-237)||(19880161-19880196)
chr7 (156-242)||(25614706-25614790)
chr7 (212-243)||(32315927-32315958)
chr7 (172-243)||(33050284-33050355)
chr7 (162-248)||(41186324-41186408)
chr7 (189-243)||(7410501-7410554)
chr7 (172-245)||(8235619-8235693)
chr7 (202-240)||(8326229-8326267)
chr7 (212-242)||(27164776-27164806)
chr7 (212-242)||(35005038-35005068)
chr7 (202-248)||(42118626-42118672)
chr7 (193-243)||(44185277-44185327)
chr7 (159-243)||(7295568-7295650)
chr7 (193-242)||(40077357-40077406)
chr7 (202-243)||(41227176-41227217)
chr7 (202-242)||(10014884-10014924)
chr7 (202-242)||(29034187-29034227)
chr7 (202-242)||(29162208-29162248)
chr7 (202-242)||(30864346-30864386)
chr7 (202-242)||(38978594-38978634)
chr7 (202-242)||(48086961-48087001)
[»] scaffold0687 (1 HSPs)
scaffold0687 (202-248)||(642-688)
[»] scaffold0002 (1 HSPs)
scaffold0002 (202-242)||(147185-147225)
[»] scaffold0651 (1 HSPs)
scaffold0651 (197-243)||(4775-4821)
[»] scaffold0514 (1 HSPs)
scaffold0514 (212-242)||(1435-1465)
[»] scaffold0003 (1 HSPs)
scaffold0003 (172-242)||(88910-88980)
[»] scaffold0024 (1 HSPs)
scaffold0024 (173-222)||(89446-89495)
[»] scaffold0618 (1 HSPs)
scaffold0618 (202-238)||(3467-3503)
[»] scaffold0119 (1 HSPs)
scaffold0119 (191-243)||(23207-23259)
[»] scaffold0004 (1 HSPs)
scaffold0004 (202-242)||(249071-249111)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 38627176 - 38627419
Alignment:
Q  3 gagtgagatgaacaccctttctaacccacactctcttgaaattcatgtgagtattatactttggaaattggtctcgcataaagtggtcagattcacatgg 102  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38627176 gagtgatatgaacactctttctaacccacactatcttgaaattcatgtgagtactatactttggaaattggtctcgcataaagtggtcagattcacatgg 38627275  T
Q  103 atttcacccgacatgagagagtgttagaaagagaatgtttatagcatctcttaattgagtaatgatatttttgtacatctattttgtgataacttttaag 202  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  38627276 atttcacccgacatgagagagtgttagaaagagagtgtttatagcatctcttaattgagtaatgata--tttgtacatctattttgtgataacttttaag 38627373  T
Q  203 acaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  38627374 acaatattatttttccctcttcttattggtcaaaaacaatatagaa 38627419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 25130875 - 25130805
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  ||| ||||||   ||||| ||| |||||||||||||||||||||||||||||||    
T  25130875 tttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaat 25130805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 26501467 - 26501397
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||   ||| |||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  26501467 tttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaat 26501397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 3977566 - 3977639
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatata 245  Q
    |||||||||||||||||||| |||||| |||| ||| |||||||| | |||||||||| || ||||| ||||||    
T  3977566 tttgtacatctattttgtgacaactttaaagataattttatttttttatcttcttattagttaaaaataatata 3977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 3100596 - 3100548
Alignment:
Q  190 gataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  3100596 gataacttttatgacaatcttgtttttctctcttcttattagtcaaaaa 3100548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 9011787 - 9011747
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  9011787 gacaatcttgtttttctctcttcttattggtcaaaaacaat 9011747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 6829714 - 6829755
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  6829714 gacaatcttgtttttctctcttcttattggtcaaaaataata 6829755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 25995611 - 25995562
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| | ||||| |||||||||||||||| ||||||||||||||||||    
T  25995611 aactttaatgacaaccttatttttctctctttttattggtcaaaaacaat 25995562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 47059810 - 47059859
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  47059810 aactttcatgacaatcttatttttctctcttttcattggtcaaaaacaat 47059859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 13813700 - 13813660
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  13813700 gacaaccttgtttttctctcttcttattggtcaaaaacaat 13813660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 42843273 - 42843313
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  42843273 gacaaccttgtttttctctcttcttattggtcaaaaacaat 42843313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 32640327 - 32640377
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaa 235  Q
    ||||||||||| ||||||||||||||| || ||| |||||||||||||||||    
T  32640327 ttttgtgataa-ttttaagacaatcttcttattcactcttcttattggtcaa 32640377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 2827638 - 2827680
Alignment:
Q  201 agacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| || || |||||||||||||||||||||||||||||    
T  2827638 agacaattttgttgttctctcttcttattggtcaaaaacaata 2827680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 7371887 - 7371917
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  7371887 tttttctctcttcttattggtcaaaaacaat 7371917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 13079022 - 13078939
Alignment:
Q  158 tgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||  ||| | | ||||| |||||| |||||||||||| || ||||||  |||| |||||||| ||||||||||    
T  13079022 tgagtaatgatattt--gtagaaccattttatgataatttttaagacaattttctttttcgttctttttattggtaaaaaacaata 13078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 17526568 - 17526526
Alignment:
Q  196 ttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  17526568 ttttatgacaatctcatttttctctctttttattggtcaaaaa 17526526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 19920894 - 19920864
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  19920894 tttttctctcttcttattggtcaaaaacaat 19920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 25239176 - 25239206
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  25239176 tttttctctcttcttattggtcaaaaacaat 25239206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 26760722 - 26760664
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| ||||||||| |||||| ||| || | ||||||| ||||||||||||||||||    
T  26760722 ttttgttataacttttgagacaaccttgttgtgctctctttttattggtcaaaaacaat 26760664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 29362631 - 29362661
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  29362631 tttttctctcttcttattggtcaaaaacaat 29362661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 29489258 - 29489328
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||  ||| ||||||   ||||| ||| ||||||| |||||||||||||||||||||||    
T  29489258 tttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaat 29489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 37947119 - 37947189
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||| ||| ||||||||| | |||||||  ||||| ||| || ||||||||||| ||||||||||||||||    
T  37947119 tttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaat 37947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 5959519 - 5959490
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||||||||||||||||||    
T  5959519 ttttctctcttcttattggtcaaaaacaat 5959490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 7420817 - 7420735
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||  |||||  ||||| |||| |||||||| |||||  || || |||||| |||||||||||||| |||||||    
T  7420817 gagtaatgatattt--gtacaattatttcgtgacaacttttaggacaacttttttcttctcttttcttattggtcaagaacaata 7420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 8934473 - 8934506
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaatata 245  Q
    ||||||||| ||||||||||||||||||||||||    
T  8934473 tttttctcttttcttattggtcaaaaacaatata 8934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 21255705 - 21255754
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| ||  |||||||||||||| ||||||||||||||||    
T  21255705 aacttttatgacaacctcctttttctctcttctcattggtcaaaaacaat 21255754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 32966418 - 32966369
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||  ||||| || ||||||||||||| ||||||||||||||||||    
T  32966418 aacttttgtgacaacctcatttttctctctttttattggtcaaaaacaat 32966369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 34941840 - 34941889
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| |||||  | |||| |||||||||||||||||||||||||||    
T  34941840 aacttttatgacaacttcatttctctctcttcttattggtcaaaaacaat 34941889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 36037661 - 36037706
Alignment:
Q  203 acaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    |||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  36037661 acaatcttctttttctctcttcttattggccaacaacaatagagaa 36037706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 50777352 - 50777393
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||    
T  50777352 gacaaccttgtttttctctcttcttattggttaaaaacaata 50777393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 51168688 - 51168737
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| |||||| || ||||||||| ||||||||||| |||||||||    
T  51168688 aacttttatgacaattttttttttctcttttcttattggttaaaaacaat 51168737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 7423145 - 7423113
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaatata 245  Q
    |||||||| ||||||||||||||||||||||||    
T  7423145 ttttctcttttcttattggtcaaaaacaatata 7423113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 36669299 - 36669335
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  36669299 gacaaccttgtttttctctcttcttattggtcaaaaa 36669335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 36930685 - 36930725
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||| ||||||||||||||||||    
T  36930685 gacaaccttctttttctctctttttattggtcaaaaacaat 36930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 40605341 - 40605385
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaa 237  Q
    |||||||| ||||| ||| |||||||||||||| |||||||||||    
T  40605341 aacttttatgacaaccttctttttctctcttctcattggtcaaaa 40605385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 42299117 - 42299153
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  42299117 gacaatcttctttttctctctttttattggtcaaaaa 42299153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 43853407 - 43853355
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatata 245  Q
    |||||||| || ||| || ||||| | ||||||||||||||||||||||||||    
T  43853407 aacttttatgataattttttttttttttcttcttattggtcaaaaacaatata 43853355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 49621503 - 49621463
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||  ||||||||||| ||||||||||||||||||    
T  49621503 gacaatcttcattttctctctttttattggtcaaaaacaat 49621463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 30633713 - 30633783
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||| ||||||    
T  30633713 tttgtacatctattttatgataactttaatgacaaccttatttttctctcttcttattggtcaagaacaat 30633783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 47683973 - 47683894
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaaca 240  Q
    ||||||||||||||  ||||| | ||||||||| ||||||| |||||| ||| | |||||||||||||||||||||||||||    
T  47683973 gagtaatgatattt--gtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaaca 47683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 30400085 - 30400125
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  30400085 gacaatcttgtttttctctcttcttattggtcaaaaacaat 30400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 44855423 - 44855357
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||||| ||||  ||| ||||||   ||||||||||||||||||||||||||||||| |||||    
T  44855423 tttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaaa 44855357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 50279986 - 50280056
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| |||||| | ||||| ||| |||||||||||||||||| ||||||||||||    
T  50279986 tttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaat 50280056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 1031347 - 1031396
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| |||||  |||||||||| |||||||||||||||||||||||    
T  1031347 aacttttatgacaactttatttttctttcttcttattggtcaaaaacaat 1031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 3069507 - 3069544
Alignment:
Q  205 aatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| |||||||||||||||||||||||||||||||    
T  3069507 aatcttgtttttctctcttcttattggtcaaaaacaat 3069544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 11574696 - 11574656
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  11574696 gacaaccttaattttctctcttcttattggtcaaaaacaat 11574656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 13159803 - 13159763
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  13159803 gacaaccttgtttttctctcttcttattggtcaaaaacaat 13159763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 20714385 - 20714345
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  20714385 gacaaccttatttttctatcttcttattggtcaaaaacaat 20714345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 32931847 - 32931887
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  32931847 gacaaccttgtttttctctcttcttattggtcaaaaacaat 32931887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 36819098 - 36819058
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  36819098 gacaaccttgtttttctctcttcttattggtcaaaaacaat 36819058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 46323025 - 46323085
Alignment:
Q  183 attttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||| |||||||||||| ||||| |||  ||||| |||||||||||||| ||||||||||    
T  46323025 attttatgataacttttatgacaaacttcattttccctcttcttattggttaaaaacaata 46323085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 50657396 - 50657344
Alignment:
Q  186 ttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||||| ||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  50657396 ttgtgattacttttaagacaatcttctttttgtcttttcatattggtcaaaaa 50657344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 54233430 - 54233470
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  54233430 gacaaccttgtttttctctcttcttattggtcaaaaacaat 54233470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 11327280 - 11327209
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| ||||  ||| ||||||   ||||| ||| ||| ||||||||||||||||||||||||||||    
T  11327280 tttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaata 11327209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 34021402 - 34021433
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||||    
T  34021402 tttttctctcttcttattggtcaaaaacaata 34021433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 43460548 - 43460489
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||| |||||||  ||||  |||  |||||||||||||||||||||||||||||||    
T  43460548 ttttgtgacaacttttgggacagccttcattttctctcttcttattggtcaaaaacaata 43460489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 21481915 - 21481865
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| |||||| || ||| ||||||||||| |||||||||||||||||    
T  21481915 aacttttgagacaacctcattgttctctcttctcattggtcaaaaacaata 21481865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 35756152 - 35756082
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  ||| ||||||   |||||  || ||||||||||||||||||||| |||||||||    
T  35756152 tttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaat 35756082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 37585586 - 37585532
Alignment:
Q  189 tgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||  ||||| ||   |||||||||||||||||||||||||||||||    
T  37585586 tgataacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaata 37585532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 43149229 - 43149312
Alignment:
Q  157 ttgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||||  | ||| ||||||||  | |||||||   |||| ||| || ||||||||||||||||||||||||||||    
T  43149229 ttgagtaatgatattt--gaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 43149312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 44910835 - 44910805
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||||    
T  44910835 ttttctctcttcttattggtcaaaaacaata 44910805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 23906927 - 23906956
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||||||||||||||||||    
T  23906927 ttttctctcttcttattggtcaaaaacaat 23906956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 28263680 - 28263647
Alignment:
Q  209 ttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| |||||||||||||||||||||||    
T  28263680 ttatttttctttcttcttattggtcaaaaacaat 28263647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 28884611 - 28884582
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||||||||||||||||||    
T  28884611 ttttctctcttcttattggtcaaaaacaat 28884582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 35376471 - 35376520
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| || |||| |||||||| ||||||||||||||||||    
T  35376471 aacttttatgacaacctcatttctctctctttttattggtcaaaaacaat 35376520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 42864975 - 42865004
Alignment:
Q  214 tttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||    
T  42864975 tttctctcttcttattggtcaaaaacaata 42865004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 44127112 - 44127161
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| || ||||||||||||||| |||||| |||||||||    
T  44127112 aacttttatgacaacctcatttttctctcttctcattggttaaaaacaat 44127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 49114499 - 49114568
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaa 241  Q
    |||| |||| |||||  |||||| ||||  || |||| ||||||||| ||||||||||||||||||||||    
T  49114499 tttgcacatttatttaatgataatttttgtgataatcatatttttctttcttcttattggtcaaaaacaa 49114568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 50652519 - 50652490
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||||||||||||||||||    
T  50652519 ttttctctcttcttattggtcaaaaacaat 50652490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 243
Target Start/End: Original strand, 7039173 - 7039201
Alignment:
Q  215 ttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||    
T  7039173 ttctctcttcttattggtcaaaaacaata 7039201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 9027796 - 9027715
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||  | ||| ||||||||  | |||||||   |||| ||| || ||||||||||||||||||||||||||||    
T  9027796 gagtaatgatattt--gaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 9027715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 9582088 - 9582128
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  9582088 gacaaccttatttttcactcttcttattggttaaaaacaat 9582128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 26021979 - 26022031
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatata 245  Q
    |||||||  ||||| ||| |||||| ||||| |||||||||||||||||||||    
T  26021979 aacttttgtgacaaccttctttttcactctttttattggtcaaaaacaatata 26022031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 37710545 - 37710505
Alignment:
Q  203 acaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||| |||||||||||| |||||||||||||| ||||    
T  37710545 acaatcttctttttctctctttttattggtcaaaaataata 37710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 41717405 - 41717365
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| | ||||||||||||||||    
T  41717405 gacaatcttctttttctctcttttcattggtcaaaaacaat 41717365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 43409294 - 43409334
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| | ||||||||||||||||    
T  43409294 gacaatcttttttttctctcttttcattggtcaaaaacaat 43409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 46344556 - 46344520
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  46344556 gacaaccttatttttctttcttcttattggtcaaaaa 46344520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 49031436 - 49031516
Alignment:
Q  160 agtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||  ||||| ||||||||||||||||||   ||||| ||   ||||||||| ||||||| |||||||||||||    
T  49031436 agtaatgatattt--gtacaactattttgtgataactttgg-gacaacctatcttttctctcatcttattagtcaaaaacaata 49031516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 53102831 - 53102871
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  53102831 gacaaccttgtttttctctcttcttattgatcaaaaacaat 53102871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 33511784 - 33511697
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||||||||  ||||| ||||||||||| |||||||  |||||  || || ||||||||||||||||||||||||||||| ||||    
T  33511784 gagtaatgatattt--gtacaactattttgtgaaaacttttgggacaacattcttcttctctcttcttattggtcaaaaacaatagagaa 33511697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 13540793 - 13540879
Alignment:
Q  155 aattgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||| |||||||||||  ||||| |||||| ||||||||||||  ||||||||| |||||||| |||||||||  ||||||| ||||    
T  13540793 aattgaataatgatattt--gtacaactatttagtgataacttttgtgacaatcttttttttctcgcttcttattaatcaaaaagaata 13540879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 13683680 - 13683594
Alignment:
Q  155 aattgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||| |||||||||||  ||||| |||||| ||||||||||||  ||||||||| |||||||| |||||||||  ||||||| ||||    
T  13683680 aattgaataatgatattt--gtacaactatttagtgataacttttgtgacaatcttttttttctcgcttcttattaatcaaaaagaata 13683594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 5924980 - 5924916
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||| ||||  ||| |||||| | ||||| |||||||||||||||||||||||||||||||    
T  5924980 tgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaa 5924916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 5925225 - 5925161
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||| ||||  ||| |||||||| ||||| ||||||||||||| |||||||||||||||||    
T  5925225 tgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaa 5925161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 6825176 - 6825246
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  ||| ||||||   | ||| ||||||||||||||||||||||||| |||||||||    
T  6825176 tttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaat 6825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 7602960 - 7603006
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  7602960 gacaatcttctttttttctcttcttattggtcaaaaacaataaagaa 7603006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 30927830 - 30927900
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| ||||||   ||||| ||| |||||||||||||||||||||||||||||||    
T  30927830 tttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaat 30927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 37562040 - 37562110
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| | ||  ||| |||||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  37562040 tttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaat 37562110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 2597089 - 2597129
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  2597089 gacaaccttgtttttctctcttcttattggtcaaaaacaat 2597129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 33817299 - 33817259
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  33817299 gacaatcttgtttttctctctttttattggtcaaaaacaat 33817259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 23138706 - 23138756
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaa 235  Q
    ||||||||||| ||||||||||||||| || ||| |||||||||||||||||    
T  23138706 ttttgtgataa-ttttaagacaatcttcttattcactcttcttattggtcaa 23138756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 41273656 - 41273617
Alignment:
Q  203 acaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  41273656 acaaccttgtttttctctcttcttattggtcaaaaacaat 41273617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 14531793 - 14531723
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||| |  ||| ||| || | ||||| ||||||||||||||||||||||| || ||||||||    
T  14531793 tttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaat 14531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 19723105 - 19723175
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||| |  ||| ||||||   ||||| ||| |||||||||||||||||| ||||||||||||    
T  19723105 tttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaat 19723175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 20994998 - 20995028
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||||    
T  20994998 ttttctctcttcttattggtcaaaaacaata 20995028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 32185605 - 32185635
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  32185605 tttttctctcttcttattggtcaaaaacaat 32185635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 32234372 - 32234426
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatataga 247  Q
    |||||||| ||||| ||| || ||||||||||| ||||||||| |||||||||||    
T  32234372 aacttttaggacaacctttttattctctcttctcattggtcaataacaatataga 32234426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 36015692 - 36015658
Alignment:
Q  209 ttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||| |||||||||||||||||||    
T  36015692 ttatttttctctctttttattggtcaaaaacaata 36015658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 41293660 - 41293690
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  41293660 tttttctctcttcttattggtcaaaaacaat 41293690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 43605609 - 43605639
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||||    
T  43605609 ttttctctcttcttattggtcaaaaacaata 43605639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 5359489 - 5359440
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||  ||||||||  |||||||||||| ||||||||||||||||||    
T  5359489 aacttttgtgacaatctcttttttctctctttttattggtcaaaaacaat 5359440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 7129665 - 7129636
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaa 241  Q
    ||||||||||||||||||||||||||||||    
T  7129665 tttttctctcttcttattggtcaaaaacaa 7129636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 13267018 - 13267055
Alignment:
Q  205 aatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| || |||||||||||||||||||||||||||||    
T  13267018 aatctaatatttctctcttcttattggtcaaaaacaat 13267055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 39258987 - 39259024
Alignment:
Q  205 aatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  39258987 aatcttgtttttctctcttcttattagtcaaaaacaat 39259024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 39359878 - 39359837
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||| |||| ||||||| |||||||||||||||||||||||    
T  39359878 gacaaccttacttttctcccttcttattggtcaaaaacaata 39359837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 6656268 - 6656308
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  6656268 gacaaccttgtttttctctcttcttattgatcaaaaacaat 6656308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 6736670 - 6736710
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  6736670 gacaaccttgtttttctctcttcttattgatcaaaaacaat 6736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 10344498 - 10344434
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||||||||  | | |||||||| ||||| ||| ||||||| |||| ||||||||||||||    
T  10344498 tgtacatctatttgataacaacttttatgacaaccttgtttttctttctttttattggtcaaaaa 10344434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 13884458 - 13884418
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| || ||||||||||||||||||| |||||||||||    
T  13884458 gacaattttgtttttctctcttcttattgatcaaaaacaat 13884418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 14228835 - 14228795
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  14228835 gacaattttatttttctctttttttattggtcaaaaacaat 14228795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 20895923 - 20895963
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| |||||||||||||||||||||  ||||||||||||    
T  20895923 gacaaccttatttttctctcttcttatcagtcaaaaacaat 20895963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 35937441 - 35937477
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  35937441 gacaaccttctttttctctcttcttattggtcaaaaa 35937477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 36178195 - 36178227
Alignment:
Q  205 aatcttatttttctctcttcttattggtcaaaa 237  Q
    |||||| ||||||||||||||||||||||||||    
T  36178195 aatcttgtttttctctcttcttattggtcaaaa 36178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 25345480 - 25345439
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25345480 gacaatcttatttttctctcttcttattggtcaaaaacaata 25345439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 12401364 - 12401294
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| ||||||   ||||| |||||||||||||||||||||||||||||||||||    
T  12401364 tttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaat 12401294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 9596743 - 9596783
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  9596743 gacaatcttgtttttctctcttcttattggtcaaaaacaat 9596783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 12512935 - 12512895
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  12512935 gacaatcttgtttttctctcttcttattggtcaaaaacaat 12512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 17489490 - 17489450
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  17489490 gacaatcttgtttttctctcttcttattggtcaaaaacaat 17489450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 41210434 - 41210484
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||| ||||| ||  ||||||||||||||||||||||||||||||||    
T  41210434 aacttttatgacaacctcctttttctctcttcttattggtcaaaaacaata 41210484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 9594620 - 9594580
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  9594620 gacaaccttatttctctctcttcttattggtcaaaaacaat 9594580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 15622186 - 15622146
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  15622186 gacaaccttgtttttctctcttcttattggtcaaaaacaat 15622146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 15917962 - 15917998
Alignment:
Q  209 ttatttttctctcttcttattggtcaaaaacaatata 245  Q
    |||||| ||||||||||||||||||||||||||||||    
T  15917962 ttatttctctctcttcttattggtcaaaaacaatata 15917998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 22920421 - 22920461
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  22920421 gacaaccttgtttttctctcttcttattggtcaaaaacaat 22920461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 28501759 - 28501719
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  28501759 gacaaccttgtttttctctcttcttattggtcaaaaacaat 28501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 33823623 - 33823663
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  33823623 gacaaccttgtttttctctcttcttattggtcaaaaacaat 33823663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 35616700 - 35616771
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||| ||| ||||||||  |||| ||||  ||||| ||| || |||||||||||||||||||||||||||||    
T  35616700 tttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtcaaaaacaata 35616771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 1760492 - 1760462
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||||    
T  1760492 ttttctctcttcttattggtcaaaaacaata 1760462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 2051058 - 2051028
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  2051058 tttttctctcttcttattggtcaaaaacaat 2051028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 7080646 - 7080616
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  7080646 tttttctctcttcttattggtcaaaaacaat 7080616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 19271991 - 19271961
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  19271991 tttttctctcttcttattggtcaaaaacaat 19271961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 30574316 - 30574346
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  30574316 tttttctctcttcttattggtcaaaaacaat 30574346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 31625996 - 31626046
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| ||||    
T  31625996 aacttttaagacaactttattgttctctcttctcattggtcaaaaaaaata 31626046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 10315343 - 10315376
Alignment:
Q  215 ttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||||||||||||||||||||||| ||||    
T  10315343 ttctctcttcttattggtcaaaaacaataaagaa 10315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 16143667 - 16143602
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaac 239  Q
    |||||||||||||  ||| |||||| | ||||||| | | |||||||| |||||||||||||||||    
T  16143667 tgtacatctatttaatgacaactttgatgacaatcatgtgtttctctcatcttattggtcaaaaac 16143602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 22653781 - 22653740
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||| ||||||||||| |||||||||||| ||||    
T  22653781 gacaatcttattgttctctcttctcattggtcaaaaataata 22653740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 3263437 - 3263473
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  3263437 gacaaccttgtttttctctcttcttattggtcaaaaa 3263473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 4954608 - 4954568
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  4954608 gacaaccttgtttttctctcttcttatgggtcaaaaacaat 4954568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 8959302 - 8959262
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||| ||||||||||||||||||    
T  8959302 gacaaccttgtttttctctctttttattggtcaaaaacaat 8959262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 10522917 - 10522881
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  10522917 gacaaccttgtttttctctcttcttattggtcaaaaa 10522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 11464052 - 11464092
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||| ||||||||||||||||||    
T  11464052 gacaaccttgtttttctctctttttattggtcaaaaacaat 11464092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 11880916 - 11880956
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||| ||||||||||||||||    
T  11880916 gacaaccttctttttctctcttctcattggtcaaaaacaat 11880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 22203838 - 22203810
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaa 241  Q
    |||||||||||||||||||||||||||||    
T  22203838 ttttctctcttcttattggtcaaaaacaa 22203810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 38011014 - 38010974
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| || ||||| |||||||||||||||||||||||||    
T  38011014 gacaattttgtttttttctcttcttattggtcaaaaacaat 38010974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 32365568 - 32365636
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||| |||||||||| | || ||  ||||||||||||||| ||||||||||||||||||    
T  32365568 tgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaat 32365636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 2193708 - 2193778
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| | ||  ||| |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  2193708 tttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaat 2193778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 53384241 - 53384310
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||| ||||||||||   |||||| || |||||||||||||||||||||||||||||||    
T  53384241 tttgtacatccattttatgataactttagtgacaat-ttgtttttctctcttcttattggtcaaaaacaat 53384310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 25936395 - 25936342
Alignment:
Q  189 tgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||||||||||||    
T  25936395 tgataacttttgtgacaatcttgtttttctcttttcttattggtcaaaaacaat 25936342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 34260009 - 34259931
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaac 239  Q
    ||||||||||||||  ||||| | |||| |||| |||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  34260009 gagtaatgatattt--gtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaaac 34259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 31221555 - 31221515
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  31221555 gacaatcttgtttttctctcttcttattggtcaaaaacaat 31221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 18634849 - 18634803
Alignment:
Q  196 ttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||    
T  18634849 ttttaagacaaccttatttttctctcttcttattgataaaaaacaat 18634803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 24235492 - 24235422
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| ||||||   |||||| ||| ||||||||||||||||||||||||||||||    
T  24235492 tttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaat 24235422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 44368101 - 44368171
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| ||||||   ||||| |||||||||||||||||||||| ||||||||||||    
T  44368101 tttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaat 44368171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 46480409 - 46480475
Alignment:
Q  176 tacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| | ||| |||||| | |||||| |||||||||||| || ||||||||||||||||||    
T  46480409 tacatctattctatgacaactttaatgacaattttatttttctctttttttattggtcaaaaacaat 46480475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 50383161 - 50383104
Alignment:
Q  181 ctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||||||||| |  |||||| |||||||||||||||| |||| ||||||||||||||    
T  50383161 ctattttgtgagattttttaaaacaatcttatttttctttctttttattggtcaaaaa 50383104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 3223131 - 3223091
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  3223131 gacaaccttctttttctctcttcttattggtcaaaaacaat 3223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 5208256 - 5208296
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  5208256 gacaaccttgtttttctctcttcttattggtcaaaaacaat 5208296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 20056524 - 20056484
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  20056524 gacaatcttgcttttctctcttcttattggtcaaaaacaat 20056484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 27001338 - 27001378
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  27001338 gacaaccttgtttttctctcttcttattggtcaaaaacaat 27001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 32901471 - 32901431
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  32901471 gacaatcttgtttttctctctttttattggtcaaaaacaat 32901431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 47106053 - 47106013
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  47106053 gacaaccttgtttttctctcttcttattggtcaaaaacaat 47106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 51377222 - 51377262
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  51377222 gacaaccttgtttttctctcttcttattggtcaaaaacaat 51377262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 6686202 - 6686147
Alignment:
Q  188 gtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| ||||  ||||||||   |||||||||||||||||||||||||||||||    
T  6686202 gtgataatttttgtgacaatctatcttttctctcttcttattggtcaaaaacaata 6686147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 7037383 - 7037453
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||   ||| ||||||   ||||| ||| |||||||| ||||||||||||||||||||||    
T  7037383 tttgtacatctattccatgacaactttagggacaaccttgtttttctcccttcttattggtcaaaaacaat 7037453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 8026703 - 8026733
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  8026703 tttttctctcttcttattggtcaaaaacaat 8026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 13267417 - 13267447
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  13267417 tttttctctcttcttattggtcaaaaacaat 13267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 25241793 - 25241847
Alignment:
Q  189 tgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||| ||||  ||||||||| |||||||||||| ||||| |||||||||||||    
T  25241793 tgataatttttgtgacaatcttctttttctctctttttatttgtcaaaaacaata 25241847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 31318895 - 31318849
Alignment:
Q  197 tttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||| ||||| ||||||||||| |||||| ||||||||||    
T  31318895 tttaagacaattttattcttctctcttctcattggttaaaaacaata 31318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 36364725 - 36364755
Alignment:
Q  213 ttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||||||||||||||||||||    
T  36364725 ttttctctcttcttattggtcaaaaacaata 36364755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 41495145 - 41495115
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  41495145 tttttctctcttcttattggtcaaaaacaat 41495115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 52669508 - 52669578
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||| |||  |||||   ||||||||| |||||||||||| |||||||||| |||||||    
T  52669508 tttgtacatccattttatgaccactttagtgacaatcttgtttttctctctttttattggtcagaaacaat 52669578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 5234391 - 5234440
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||  |||||| || |||||||||||| ||||||||||||||||||    
T  5234391 aacttttgtgacaattttttttttctctctttttattggtcaaaaacaat 5234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 8456045 - 8456004
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||| ||| |||||||||||| |||||||||||||||||||    
T  8456045 gacaaccttctttttctctctttttattggtcaaaaacaata 8456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 18874844 - 18874893
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| ||  |||||||||||||| ||||||||||||||||    
T  18874844 aacttttatgacaacctcctttttctctcttctcattggtcaaaaacaat 18874893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 22894056 - 22893970
Alignment:
Q  154 taattgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||  | ||| || |||||  | |||||||  ||||||||| || | ||||||| ||||||||||||||||||    
T  22894056 taattgagtaatgatattt--gaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaat 22893970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 22945724 - 22945638
Alignment:
Q  154 taattgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||  | ||| || |||||  | |||||||  ||||||||| || | ||||||| ||||||||||||||||||    
T  22945724 taattgagtaatgatattt--gaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaat 22945638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 33860466 - 33860515
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| | ||||| || ||||||||||||| ||||||||||||||||||    
T  33860466 aactttgatgacaacctcatttttctctcttattattggtcaaaaacaat 33860515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 43983048 - 43982999
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||||||  || ||||||||||| ||||||||||||||||    
T  43983048 aacttttaggacaatctagttgttctctcttctcattggtcaaaaacaat 43982999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 44272741 - 44272782
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  44272741 gacaatctcctttttctctcttattattggtcaaaaacaata 44272782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 15638272 - 15638232
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  15638272 gacaaccttgtttttctctcttcttattggacaaaaacaat 15638232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 33484035 - 33484075
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| |||| |||||||||||||||||| |||||||||||    
T  33484035 gacaaccttacttttctctcttcttattgatcaaaaacaat 33484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 37732084 - 37732048
Alignment:
Q  209 ttatttttctctcttcttattggtcaaaaacaatata 245  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  37732084 ttattgttctctctttttattggtcaaaaacaatata 37732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 24845 - 24775
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  |||||| |||   ||||| ||||||||||||||||||||||||| |||||||||    
T  24845 tttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaat 24775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 24491597 - 24491647
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  24491597 aacttttgagacaatcttattgttctctcttcttattggttaaaaacaata 24491647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 32755839 - 32755774
Alignment:
Q  183 attttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||| ||||||| |||||  |||||||||||||||| | ||||||||||||||||| ||||    
T  32755839 attttgtgacaacttttgagacagccttatttttctctcttttgattggtcaaaaacaatagagaa 32755774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 27307174 - 27307214
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27307174 gacaaccttatttttctctcttcttattggtcaaaaacaat 27307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 3299008 - 3299074
Alignment:
Q  176 tacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||  |||||| |||   ||||||||||||| ||||||||||||||||| |||||||||    
T  3299008 tacatctatttaatgataattttggtgacaatcttatttctctctcttcttattggttaaaaacaat 3299074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 37966528 - 37966458
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||  ||| ||||||   ||||| ||| |||||||||||||||||||||||||||||||    
T  37966528 tttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaat 37966458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 44484555 - 44484625
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||| ||| ||||||   |||||  || |||||||||||||||||||||||||||||||    
T  44484555 tttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 44484625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 42141498 - 42141580
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||  | ||||||||||  ||||||||||   ||||| ||| ||||||||| ||||||||| ||||||||||||    
T  42141498 gagtaatgatattt--ggacatctatttgatgataactttgttgacaaccttgtttttctctattcttattgatcaaaaacaata 42141580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 17826217 - 17826149
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||  || |||||| | ||||| ||| |||||||||||||||||| || |||||||||    
T  17826217 tgtacatctattttaagacaactttcatgacaaccttgtttttctctcttcttattagtaaaaaacaat 17826149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 23048012 - 23048052
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  23048012 gacaaccttgtttttctctcttcttattggtcaaaaacaat 23048052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 31009720 - 31009664
Alignment:
Q  191 ataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatataga 247  Q
    ||||||||||||| ||  ||  |||||||||||||||||| ||||||||||||||||    
T  31009720 ataacttttaagataactttcattttctctcttcttattgatcaaaaacaatataga 31009664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 36383604 - 36383564
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  36383604 gacaaccttgtttttctctcttcttattggtcaaaaacaat 36383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 4432459 - 4432428
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||||    
T  4432459 tttttctctcttcttattggtcaaaaacaata 4432428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 34144481 - 34144516
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaa 237  Q
    ||||||||| ||||||||||||||||||||||||||    
T  34144481 gacaatcttgtttttctctcttcttattggtcaaaa 34144516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 41749579 - 41749629
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaa 235  Q
    ||||||||||| ||||||||||||||| || ||| |||||||||||||||||    
T  41749579 ttttgtgataa-ttttaagacaatcttcttattcactcttcttattggtcaa 41749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Complemental strand, 5962770 - 5962740
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  5962770 tttttctctcttcttattggtcaaaaacaat 5962740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 16463443 - 16463393
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||  ||||||||| || | |||||||||||||||||||||||||||    
T  16463443 aacttttgggacaatcttgttgtgctctcttcttattggtcaaaaacaata 16463393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 30487391 - 30487421
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  30487391 tttttctctcttcttattggtcaaaaacaat 30487421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 36909782 - 36909812
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  36909782 tttttctctcttcttattggtcaaaaacaat 36909812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 6365337 - 6365288
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| ||  |||||||||||| ||||||||||||||||||    
T  6365337 aacttttatgacaacctcttttttctctctttttattggtcaaaaacaat 6365288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 6742330 - 6742375
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||  ||||||||| ||| |||||||||||||||||||||||    
T  6742330 aacttttgtgacaatcttctttctctctcttcttattggtcaaaaa 6742375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 14957721 - 14957688
Alignment:
Q  215 ttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||||||||||||||||||||||| ||||    
T  14957721 ttctctcttcttattggtcaaaaacaatagagaa 14957688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 20974505 - 20974460
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||| | |||||| || |||||||||||||||||||||||||||    
T  20974505 aactttaatgacaattttgtttttctctcttcttattggtcaaaaa 20974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 33857352 - 33857319
Alignment:
Q  209 ttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| |||||||||||||||||||||||    
T  33857352 ttatttttctgtcttcttattggtcaaaaacaat 33857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 35518458 - 35518376
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||  | ||| ||||||||  | |||||||  |||||  || || |||||||||||||||||||||||||||||    
T  35518458 gagtaatgatattt--gaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaata 35518376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 37109313 - 37109342
Alignment:
Q  214 tttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||    
T  37109313 tttctctcttcttattggtcaaaaacaata 37109342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 37631287 - 37631336
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| ||  |||||||||||||| ||||||||||||||||    
T  37631287 aacttttatgacaacctcttttttctctcttctcattggtcaaaaacaat 37631336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 1277884 - 1277832
Alignment:
Q  191 ataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| |||||||||  | ||||||||||| ||||||||| |||||||    
T  1277884 ataacttttaggacaatcttgatattctctcttctcattggtcaataacaata 1277832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 8757727 - 8757646
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||||||||  | ||| ||||||||  | |||||||   |||| ||| || ||||||||||||||||||||||||||||    
T  8757727 gagtaatgatattt--gaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaat 8757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 9377700 - 9377732
Alignment:
Q  215 ttctctcttcttattggtcaaaaacaatataga 247  Q
    |||||||||||||||||||||||| ||||||||    
T  9377700 ttctctcttcttattggtcaaaaagaatataga 9377732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 29893752 - 29893712
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| || ||||||||||||||||||| |||||||||||    
T  29893752 gacaattttgtttttctctcttcttattgatcaaaaacaat 29893712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 38246680 - 38246720
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  38246680 gacaaccttgtttctctctcttcttattggtcaaaaacaat 38246720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 38572081 - 38572041
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  38572081 gacaaccttgtttttctctcttcttattggtcaaagacaat 38572041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 24881708 - 24881752
Alignment:
Q  203 acaatcttatttttctctcttcttattggtcaaaaacaatataga 247  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  24881708 acaatcttatttttctctcttcttattagtcaaaaagaatataga 24881752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 3339398 - 3339469
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| ||||  ||| ||||||   ||||||||| |||||||||||| |||||||||||||||||||    
T  3339398 tttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaata 3339469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 9188866 - 9188911
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||    
T  9188866 aacttttatgataatctcatttttctctcttcttattggtcaaaaa 9188911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 1804011 - 1803971
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  1804011 gacaaccttgtttttctctcttcttattggtcaaaaacaat 1803971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 27335036 - 27334965
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| ||||  ||| |||||| | ||||| ||| |||||||||||| |||||||||||||| ||||    
T  27335036 tttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataata 27334965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 27395776 - 27395705
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| ||||  ||| |||||| | ||||| ||| |||||||||||| |||||||||||||| ||||    
T  27395776 tttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataata 27395705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 363572 - 363527
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattg 230  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||    
T  363572 ttttgtgaaaacttttaagacaat-ttctttttctctcttcttattg 363527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 7304025 - 7304075
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| |||||| || ||| ||||||||||| |||||||||||||||||    
T  7304025 aacttttgagacaacctcattgttctctcttctcattggtcaaaaacaata 7304075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 17902631 - 17902661
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  17902631 tttttctctcttcttattggtcaaaaacaat 17902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 23653813 - 23653862
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| || ||||||||||||||| || |||||||||||||    
T  23653813 aacttttatgacaacctcatttttctctcttctcataggtcaaaaacaat 23653862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 1604726 - 1604675
Alignment:
Q  184 ttttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaa 236  Q
    ||||||||||| ||||||||||||||| || ||| |||||| |||||||||||    
T  1604726 ttttgtgataa-ttttaagacaatcttcttcttcactcttcatattggtcaaa 1604675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 2056925 - 2056885
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  2056925 gacaaccttgtttctctctcttcttattggtcaaaaacaat 2056885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 3660282 - 3660322
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||| ||||||||||||||||||    
T  3660282 gacaaccttgtttttctctctttttattggtcaaaaacaat 3660322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 6435178 - 6435138
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
T  6435178 gacaaccttgtttttctctcttcttattggttaaaaacaat 6435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 11017524 - 11017484
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  11017524 gacaaccttgtttctctctcttcttattggtcaaaaacaat 11017484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 16743195 - 16743235
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| || ||||||||||||||| ||||||||||||||||    
T  16743195 gacaacctcatttttctctcttctcattggtcaaaaacaat 16743235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 33491879 - 33491843
Alignment:
Q  203 acaatcttatttttctctcttcttattggtcaaaaac 239  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  33491879 acaaccttatttctctctcttcttattggtcaaaaac 33491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 204362 - 204417
Alignment:
Q  188 gtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||| |||||||  ||||||||  ||||||||||||||||||||||||||||||||    
T  204362 gtgacaacttttgtgacaatctactttttctctcttcttattggtcaaaaacaata 204417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 30201431 - 30201360
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||  ||| | ||| |||||| | |||||||||||||||||||||| |||||||||||||| ||||    
T  30201431 tttgtacatacattctatgacaactttaatgacaatcttatttttctctctttttattggtcaaaaataata 30201360  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 26041482 - 26041412
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||| ||| ||||||   |||||  || |||||||||||||||||||||||||||||||    
T  26041482 tttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 26041412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 44511311 - 44511241
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| ||||| ||| ||||||   |||||| || ||||||||| |||||||||||||||||||||    
T  44511311 tttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaat 44511241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 48057396 - 48057466
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  ||| | ||||   |||||| || |||||||||||||||||||||||||||||||    
T  48057396 tttgtacatctatttgatgacatctttagtgacaattttgtttttctctcttcttattggtcaaaaacaat 48057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 37149376 - 37149445
Alignment:
Q  174 tgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||||   || |||||||| ||||| ||| ||||||| ||||||||||||| ||||||||||    
T  37149376 tgtacatctatttcaagacaacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaata 37149445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 42431907 - 42431825
Alignment:
Q  158 tgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||  ||||||| |||   ||| ||||||   ||||| ||| |||||||||||||||||||||||||||||||    
T  42431907 tgagtaatgatattt--gtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaat 42431825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 43255455 - 43255532
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||||||||||||  ||||||||| ||  |||||| |||   |||||||||| ||||||||||||||||| ||||||||    
T  43255455 gagtaatgatattt--gtacatctaattgatgataattttggtgacaatcttacttttctctcttcttattagtcaaaaa 43255532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 44175687 - 44175647
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  44175687 gacaatcttctttttctttcttcttattggtcaaaaacaat 44175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 49014309 - 49014373
Alignment:
Q  183 attttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatataga 247  Q
    ||||||||| |||||||| ||||| | | ||||||||| || |||||||||||||||||| ||||    
T  49014309 attttgtgacaacttttaggacaaacatctttttctctatttttattggtcaaaaacaatgtaga 49014373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 19880161 - 19880196
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaa 237  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19880161 gacaatcttatttttctctcttcttatgggtcaaaa 19880196  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 25614706 - 25614790
Alignment:
Q  156 attgagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||  ||||||||| ||  ||| || |||   ||||| ||| ||||||||||||||||||||| |||||||||    
T  25614706 attgagtaatgatattt--gtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaat 25614790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 32315958 - 32315927
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||||||||||||||||||||    
T  32315958 tttttctctcttcttattggtcaaaaacaata 32315927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 33050355 - 33050284
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| ||||  ||| ||||||   ||||| ||| ||| ||||||||||||||||||||||||||||    
T  33050355 tttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaata 33050284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 41186408 - 41186324
Alignment:
Q  162 taatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    |||||||||||||  ||| ||||||||||| || || ||  ||||| || ||||| |||||||||||||| |||||| |||||||||    
T  41186408 taatgatattttt--acaactattttgtgacaatttgtagaacaatattctttttatctcttcttattggacaaaaataatatagaa 41186324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 7410501 - 7410554
Alignment:
Q  189 tgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||||  |||||| |||||||| ||||||||||| ||||||||||||||    
T  7410501 tgataacttttgtgacaattttattttt-tctcttcttatcggtcaaaaacaata 7410554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 8235619 - 8235693
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttctta-ttggtcaaaaacaatata 245  Q
    |||| ||||||||||  |||||||||| | ||||||  | |||||||||||||||| ||||| ||||||||||||    
T  8235619 tttgcacatctatttaatgataactttgatgacaattatgtttttctctcttcttatttggtaaaaaacaatata 8235693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 8326267 - 8326229
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaaca 240  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  8326267 gacaatcgtatttttctctcttcttattgatcaaaaaca 8326229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 27164776 - 27164806
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  27164776 tttttctctcttcttattggtcaaaaacaat 27164806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 35005038 - 35005068
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  35005038 tttttctctcttcttattggtcaaaaacaat 35005068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 42118626 - 42118672
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||| ||| || ||||||||||||||||||||||||||||| ||||    
T  42118626 gacaaccttcttcttctctcttcttattggtcaaaaacaatagagaa 42118672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 44185327 - 44185277
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||| |||||| || ||| ||||||||||| |||||||||||||||||    
T  44185327 aacttttgagacaacctcattgttctctcttctcattggtcaaaaacaata 44185277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 7295650 - 7295568
Alignment:
Q  159 gagtaatgatatttttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||||||  ||||| || ||||| || |||||||   |||| ||| || ||||||||||| |||||||||||||||||    
T  7295650 gagtaatgatattt--gtacaacttttttgagacaacttttggaacaaccttgttattctctcttctcattggtcaaaaacaata 7295568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 40077406 - 40077357
Alignment:
Q  193 aacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||| ||||| ||  ||||||| |||||||||||||||||||||||    
T  40077406 aacttttatgacaacctcctttttctttcttcttattggtcaaaaacaat 40077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 41227217 - 41227176
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  41227217 gacaaccttatttttctctactcttattggtcaaaaacaata 41227176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 10014884 - 10014924
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||| || |||||||||||| ||||||||||||||||||    
T  10014884 gacaattttgtttttctctctttttattggtcaaaaacaat 10014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 29034227 - 29034187
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| | ||||||||||||||||    
T  29034227 gacaatcttctttttctctcttttcattggtcaaaaacaat 29034187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 29162208 - 29162248
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  29162208 gacaatcttgtttttctctctttttattgatcaaaaacaat 29162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 30864346 - 30864386
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||| |||||||||||||||||||||    
T  30864346 gacaaccttgtttttctcttttcttattggtcaaaaacaat 30864386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 38978634 - 38978594
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||| ||||||||||||    
T  38978634 gacaaccttgtttttctctcttcttatttgtcaaaaacaat 38978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 48087001 - 48086961
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||||||| ||| ||||| |||||||||||||||||||||    
T  48087001 gacaatcttgtttctctcttttcttattggtcaaaaacaat 48086961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 642 - 688
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaatatagaa 248  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  642 gacaatcttctttttttctcttcttattggtcaaaaacaataaagaa 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 147185 - 147225
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  147185 gacaaccttgtttttctctcttcttattggtcaaaaacaat 147225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 4775 - 4821
Alignment:
Q  197 tttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    ||||||||||| ||||| ||||||||||| |||||| ||||||||||    
T  4775 tttaagacaattttattcttctctcttctcattggttaaaaacaata 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 242
Target Start/End: Original strand, 1435 - 1465
Alignment:
Q  212 tttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||||||||||||||||||||||||    
T  1435 tttttctctcttcttattggtcaaaaacaat 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 88980 - 88910
Alignment:
Q  172 tttgtacatctattttgtgataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    |||||||||| || |  ||||||||||   ||||| ||||||||| ||| |||||||||||||||||||||    
T  88980 tttgtacatccatctcatgataactttagtgacaaccttatttttttcttttcttattggtcaaaaacaat 88910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 89495 - 89446
Alignment:
Q  173 ttgtacatctattttgtgataacttttaagacaatcttatttttctctct 222  Q
    ||||||| |||||||||||||| ||||| ||||| ||| |||||||||||    
T  89495 ttgtacaactattttgtgataatttttatgacaaacttttttttctctct 89446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 3503 - 3467
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaa 238  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  3503 gacaaccttatttttctttcttcttattggtcaaaaa 3467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 23207 - 23259
Alignment:
Q  191 ataacttttaagacaatcttatttttctctcttcttattggtcaaaaacaata 243  Q
    |||||||||| |||||||||  | ||||||||||| ||||||||| |||||||    
T  23207 ataacttttaggacaatcttgatattctctcttctcattggtcaataacaata 23259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 249071 - 249111
Alignment:
Q  202 gacaatcttatttttctctcttcttattggtcaaaaacaat 242  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  249071 gacaaccttgtttttctctcttcttattgatcaaaaacaat 249111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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