View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_high_26 (Length: 248)
Name: NF10579_high_26
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_high_26 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 8035248 - 8035487
Alignment:
| Q |
9 |
cataggcaggatttaatgattaataagagtaattttatattacgtcaaaaaacaaaagagtaattttataaaaatgccacactatttatttacaactttt |
108 |
Q |
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| T |
8035248 |
cataggcaggatttaatgattaataagagtaattttatattacgtcaaaaaacaaaagagtaattttataaaaatgccacactatttatttacaactttt |
8035347 |
T |
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| Q |
109 |
tctttacttatatgaaataattgaaagtgatactcaataaggataaagagtgtcgtgtaaactattatggttctctcatattcaatgaattaatttctgc |
208 |
Q |
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||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
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| T |
8035348 |
tctttacttatatgaaataattgaaagtgatactcaacatggataaagagtgtcgtataaactattatggttctctcatattcaatgaattaatttctac |
8035447 |
T |
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| Q |
209 |
aattgtgtatagcgaatatcttaattttttaaaggaaaat |
248 |
Q |
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||||||| |||||||||||||||||||||||||||||||| |
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| T |
8035448 |
aattgtgcatagcgaatatcttaattttttaaaggaaaat |
8035487 |
T |
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