View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_high_38 (Length: 210)
Name: NF10579_high_38
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_high_38 |
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Alignment Details
Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 43 - 195
Target Start/End: Complemental strand, 3411425 - 3411273
Alignment:
| Q |
43 |
tctaatgcatattgtgccaccaaatcactaactatatctcaaccaccactagtaattactgttgcaacactctctctgattgatcgtcccccacctcatc |
142 |
Q |
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| T |
3411425 |
tctaatgcatattgtgccaccaaatcactaactatacctcaaccatcactatccattattgttacaacactctctctgattgatcgtcccccacctcatc |
3411326 |
T |
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| Q |
143 |
cactgccaataaatatggcctccatggtcacatgacaattttgtgttttggtt |
195 |
Q |
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| T |
3411325 |
cactgtcaataaatatggcctccatagtcacatgacaattttgtgttttggtt |
3411273 |
T |
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