View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_109 (Length: 217)
Name: NF10579_low_109
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_109 |
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Alignment Details
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 20267768 - 20267944
Alignment:
| Q |
26 |
tcctcttcctattcctattcctatatatcactccactcatctttacaatttcctatctcaaaaatcttctccctctactaaaacctatacttaccctttt |
125 |
Q |
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|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
20267768 |
tcctattcctattcctattcctatatatcactccacttatctttacaatttcctatctcaaaaatcttctccctctactaaaacctatacttactctttt |
20267867 |
T |
|
| Q |
126 |
ctttgcatcctttgaaacatgaaccatgaagagaaagttaccatggacttggttccaccttctgatcaacacctttg |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20267868 |
ctttgcatcctttgaaacatgaaccatgaagagaaagttaccatggacttggttccaccttctgatcaacacctttg |
20267944 |
T |
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