View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_114 (Length: 206)
Name: NF10579_low_114
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_114 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 10251533 - 10251715
Alignment:
| Q |
20 |
gatctaaccaacaaccaaagatattaatgcaatcatccgaattcctcttaggttatatatgccaactagtcgatg------tgtttctaatattctggca |
113 |
Q |
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| T |
10251533 |
gatctaaccaacaaccgaagatattaatgaaatcatccgaattcctcttaggttatatatgccaactagtcgatgctcccatgtttctaatattctggca |
10251632 |
T |
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| Q |
114 |
ggttgatttggttagcaacataggtttggttggtcatgtttcgtttggcgatgttctattgcctctaatttattcctatgcta |
196 |
Q |
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| T |
10251633 |
ggttgatttggttagcaacataggtttggttggtcatgtttcgtttggcgatgttctattgcctctaatttattcctatgcta |
10251715 |
T |
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