View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_49 (Length: 297)
Name: NF10579_low_49
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 53597196 - 53597476
Alignment:
| Q |
1 |
ataactattcacaaatctcaaccatacacatttgctcaatttataccaacatacaatatactcatattgctagtttaaaaggactaaagaactgaattca |
100 |
Q |
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|||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
53597196 |
ataactattcacaagtcacaaccatacacattcgctcaatttataccaacatacaatatactcatattgctagtttaaaaggactaaataactgaattca |
53597295 |
T |
|
| Q |
101 |
cactaccatatataaccaatatacatacttatatgattaattaaattaatatggtcgttctccaacataattaccaacaggatcatagttacaagtcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53597296 |
cactaccatatataaccaatatacatacttatatgattaattaaattaatatggtcgttctccaacataattaccaacaggatcatagttacaagtcatg |
53597395 |
T |
|
| Q |
201 |
aacacatctccatcatcacacacaactcttgcacaaccaattcttctagtacttttccacacaatctgagtataatgtcca |
281 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53597396 |
aacacatctccatcatcacacacaactcttgcacaaccaattcttctagtacttttccacacaatctgagtataatgtcca |
53597476 |
T |
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