View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_62 (Length: 261)
Name: NF10579_low_62
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_62 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 50341501 - 50341264
Alignment:
| Q |
18 |
attaagcaaaggaatattacttcatatatatgcccttggcattgattcccttatcagcacagctttagatatgtgaatgatataaattcttcttgctttg |
117 |
Q |
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| T |
50341501 |
attaagcaaaggaatattacttcatatatatgcccttggcattgattcccttatcagcacagctttagatatgtgaatgatataaattcttcttgctttg |
50341402 |
T |
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| Q |
118 |
ttttatttgtccatatgcatctaacaagcatataggagcagtaattaaagtgaagcactaccattgtgtggaaccatattcctctcacaatactatcttt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50341401 |
ttttatttgtccatatgcatctaacaagcatataggagcagtaattaaagtgaagcactaccattgtgtggaaccatattcctctcacaatactatcttc |
50341302 |
T |
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| Q |
218 |
atttgcattcacatttattaattaaatattcttctctc |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
50341301 |
atttgcattcacatttattaattaaatattcttctctc |
50341264 |
T |
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