View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_64 (Length: 259)
Name: NF10579_low_64
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_64 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 39247469 - 39247236
Alignment:
| Q |
11 |
aagcagagatggaataaacagtctactatcaatttccgcaagttacattccagcacagttacaaacttaattctacatgaaattttgattaaatttttca |
110 |
Q |
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| T |
39247469 |
aagcaaagatggaataaacagtctactatcaatttccgcaagttacattccagcacagttacaaacttaattctacatgaaattttgattaaatttttca |
39247370 |
T |
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| Q |
111 |
ttcacgaactagttcacataaattcttgccaatgttgtttttacatatggagtttcatgtgatttcgtttgtcaggtatgatggccacgtgttagatcca |
210 |
Q |
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| T |
39247369 |
ttcaggaactagttcacataaattcttgccaatgttgtttttacatatggagtttcatgtgatttcgtttgtcaggtatgatggccacgtgttagatcca |
39247270 |
T |
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| Q |
211 |
ctagctaatcttcaattaacaacgggaacatatt |
244 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
39247269 |
ctagctaatcttcaattaacaacgggaacatatt |
39247236 |
T |
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