View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10579_low_74 (Length: 249)
Name: NF10579_low_74
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10579_low_74 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 96206 - 96407
Alignment:
| Q |
1 |
ctcgagaaaactgctttgaatgatcacgaagaagaaactggtaggtaccacttcttgttgcttcactaacctctttctaactttacttaactacttattc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
96206 |
ctcgagaaaactgctttgaatgatcacgaagaagaaactggtaggtaccacttcttgttgcttcactaacctctttctaactttacttaactacttattc |
96305 |
T |
|
| Q |
101 |
tgtttctgcaggaaaggttcttcttatgcttggaaaaatccagttcaaacttcagaaacttattgataactatgtatgtaataattccctattccatcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
96306 |
tgtttctgcaggaaaggttcttcttatgcttggaaaaatccagttcaaacttcagaaacttattgataactatgtatgtaataattccctattccatcca |
96405 |
T |
|
| Q |
201 |
ta |
202 |
Q |
| |
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|| |
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|
| T |
96406 |
ta |
96407 |
T |
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