View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10579_low_90 (Length: 239)

Name: NF10579_low_90
Description: NF10579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10579_low_90
NF10579_low_90
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-223)||(116619-116841)
[»] scaffold0654 (1 HSPs)
scaffold0654 (1-223)||(6700-6922)
[»] chr2 (35 HSPs)
chr2 (1-91)||(37053511-37053601)
chr2 (14-113)||(17952777-17952875)
chr2 (25-92)||(38239638-38239705)
chr2 (12-113)||(10150651-10150751)
chr2 (17-82)||(37766724-37766789)
chr2 (1-81)||(3673734-3673814)
chr2 (14-82)||(33267592-33267660)
chr2 (36-113)||(7936922-7936998)
chr2 (14-79)||(11344360-11344425)
chr2 (47-112)||(26484193-26484257)
chr2 (14-67)||(40837504-40837557)
chr2 (15-79)||(28933753-28933817)
chr2 (36-92)||(41240975-41241031)
chr2 (18-77)||(10143103-10143162)
chr2 (43-82)||(10190205-10190244)
chr2 (23-82)||(31461364-31461423)
chr2 (19-82)||(33197320-33197383)
chr2 (17-92)||(34339039-34339114)
chr2 (54-84)||(9878055-9878085)
chr2 (18-72)||(13866825-13866879)
chr2 (42-76)||(26522728-26522762)
chr2 (14-72)||(32098384-32098442)
chr2 (42-92)||(42974268-42974318)
chr2 (55-92)||(9404516-9404553)
chr2 (25-78)||(14277981-14278034)
chr2 (17-82)||(35459836-35459901)
chr2 (14-82)||(1493589-1493657)
chr2 (14-92)||(11513817-11513892)
chr2 (14-82)||(18962114-18962182)
chr2 (17-77)||(25609727-25609787)
chr2 (14-82)||(28803582-28803650)
chr2 (18-82)||(35713149-35713213)
chr2 (15-79)||(37518901-37518965)
chr2 (14-82)||(38355145-38355212)
chr2 (36-76)||(41033048-41033088)
[»] chr8 (24 HSPs)
chr8 (18-82)||(14482128-14482192)
chr8 (14-81)||(8536125-8536191)
chr8 (17-92)||(37444494-37444570)
chr8 (18-78)||(38036192-38036252)
chr8 (15-82)||(34770818-34770885)
chr8 (15-78)||(42597331-42597394)
chr8 (19-82)||(10488418-10488478)
chr8 (41-82)||(26813908-26813949)
chr8 (25-82)||(28769426-28769483)
chr8 (25-82)||(39392748-39392805)
chr8 (25-114)||(40356766-40356854)
chr8 (14-82)||(7026657-7026725)
chr8 (28-82)||(5226528-5226582)
chr8 (42-115)||(8629001-8629075)
chr8 (14-92)||(13561388-13561466)
chr8 (14-92)||(31884510-31884588)
chr8 (55-92)||(8603617-8603654)
chr8 (14-82)||(13652141-13652209)
chr8 (14-82)||(13710784-13710852)
chr8 (36-92)||(27320232-27320288)
chr8 (18-82)||(35534941-35535005)
chr8 (36-92)||(35869753-35869809)
chr8 (14-82)||(40280281-40280349)
chr8 (25-113)||(42370448-42370535)
[»] chr5 (30 HSPs)
chr5 (36-111)||(36638644-36638718)
chr5 (19-91)||(35095864-35095936)
chr5 (14-77)||(12975278-12975341)
chr5 (14-81)||(37063150-37063217)
chr5 (43-113)||(11095574-11095643)
chr5 (14-82)||(19177405-19177473)
chr5 (14-82)||(28586842-28586910)
chr5 (18-82)||(31694444-31694508)
chr5 (25-84)||(7096214-7096273)
chr5 (36-82)||(19113215-19113261)
chr5 (14-92)||(32172569-32172647)
chr5 (12-85)||(37968814-37968887)
chr5 (27-112)||(40499764-40499848)
chr5 (1-113)||(4855594-4855705)
chr5 (15-71)||(10303739-10303794)
chr5 (12-72)||(16889671-16889731)
chr5 (26-82)||(20982223-20982279)
chr5 (36-92)||(26516214-26516270)
chr5 (63-111)||(34198333-34198380)
chr5 (36-92)||(38819673-38819729)
chr5 (36-79)||(29588809-29588852)
chr5 (20-79)||(39128568-39128627)
chr5 (36-82)||(13224355-13224401)
chr5 (14-80)||(35135738-35135804)
chr5 (15-92)||(6738484-6738561)
chr5 (14-82)||(32194157-32194226)
chr5 (36-92)||(10391269-10391325)
chr5 (17-77)||(11835208-11835268)
chr5 (14-81)||(37611269-37611334)
chr5 (14-81)||(37787999-37788064)
[»] chr7 (33 HSPs)
chr7 (17-82)||(30496630-30496695)
chr7 (14-105)||(35536011-35536101)
chr7 (14-114)||(991964-992064)
chr7 (14-113)||(5369767-5369863)
chr7 (14-82)||(7244628-7244696)
chr7 (14-82)||(24973870-24973938)
chr7 (14-113)||(27121662-27121759)
chr7 (14-82)||(33894549-33894616)
chr7 (14-82)||(45593795-45593863)
chr7 (49-113)||(46056119-46056182)
chr7 (18-82)||(49060466-49060530)
chr7 (14-69)||(1417203-1417258)
chr7 (14-68)||(5006585-5006639)
chr7 (44-113)||(48496600-48496667)
chr7 (18-78)||(2223078-2223138)
chr7 (14-82)||(3241367-3241435)
chr7 (42-82)||(27492721-27492761)
chr7 (14-82)||(30751443-30751511)
chr7 (42-82)||(47006974-47007014)
chr7 (18-81)||(3610820-3610883)
chr7 (14-69)||(5272896-5272951)
chr7 (14-113)||(39539837-39539935)
chr7 (41-96)||(47559711-47559766)
chr7 (18-76)||(28165023-28165081)
chr7 (13-67)||(28178910-28178964)
chr7 (36-82)||(46213729-46213775)
chr7 (41-82)||(45078219-45078260)
chr7 (36-92)||(22388002-22388058)
chr7 (17-77)||(37832218-37832278)
chr7 (14-82)||(39551624-39551692)
chr7 (60-92)||(40438986-40439018)
chr7 (14-74)||(46091530-46091590)
chr7 (54-90)||(47037807-47037843)
[»] chr1 (29 HSPs)
chr1 (14-91)||(870962-871039)
chr1 (7-87)||(6933030-6933110)
chr1 (14-82)||(38651485-38651553)
chr1 (45-92)||(24857621-24857668)
chr1 (14-88)||(49560635-49560709)
chr1 (60-113)||(41638432-41638484)
chr1 (16-112)||(4202207-4202302)
chr1 (36-82)||(6659629-6659675)
chr1 (31-81)||(13037791-13037841)
chr1 (35-113)||(29046010-29046087)
chr1 (18-80)||(46499934-46499996)
chr1 (17-92)||(37841913-37841989)
chr1 (14-82)||(44032075-44032143)
chr1 (14-70)||(50319230-50319286)
chr1 (14-81)||(17269177-17269244)
chr1 (26-113)||(24702157-24702243)
chr1 (13-76)||(26184683-26184746)
chr1 (14-92)||(4200145-4200223)
chr1 (16-82)||(15437889-15437955)
chr1 (14-92)||(23895252-23895330)
chr1 (14-63)||(26293182-26293231)
chr1 (14-82)||(7274015-7274083)
chr1 (14-75)||(15361644-15361707)
chr1 (46-113)||(15579377-15579445)
chr1 (18-86)||(21002075-21002143)
chr1 (17-69)||(36151584-36151636)
chr1 (15-79)||(40357963-40358027)
chr1 (14-82)||(45107549-45107616)
chr1 (14-82)||(48748659-48748726)
[»] chr4 (33 HSPs)
chr4 (14-82)||(54325113-54325181)
chr4 (14-93)||(45128386-45128465)
chr4 (14-92)||(44319866-44319943)
chr4 (14-82)||(4191665-4191734)
chr4 (16-81)||(47970245-47970310)
chr4 (25-113)||(19422314-19422401)
chr4 (39-82)||(2980572-2980615)
chr4 (19-82)||(51555948-51556011)
chr4 (47-113)||(9843775-9843840)
chr4 (14-100)||(30207647-30207731)
chr4 (14-91)||(25487621-25487698)
chr4 (18-74)||(3662283-3662338)
chr4 (14-82)||(22684592-22684660)
chr4 (14-82)||(30024626-30024694)
chr4 (14-82)||(36734819-36734887)
chr4 (15-82)||(21157694-21157761)
chr4 (18-96)||(23503470-23503549)
chr4 (14-73)||(30338668-30338727)
chr4 (14-76)||(51044534-51044597)
chr4 (45-87)||(3891498-3891540)
chr4 (14-80)||(4071811-4071876)
chr4 (14-76)||(7368132-7368194)
chr4 (26-76)||(21593099-21593149)
chr4 (19-81)||(41088311-41088373)
chr4 (42-111)||(969449-969517)
chr4 (15-72)||(24160926-24160983)
chr4 (42-87)||(41050617-41050662)
chr4 (14-83)||(54986347-54986415)
chr4 (17-92)||(485997-486073)
chr4 (36-92)||(4471087-4471143)
chr4 (36-92)||(24443954-24444010)
chr4 (14-82)||(24929419-24929487)
chr4 (14-82)||(49219065-49219133)
[»] chr3 (32 HSPs)
chr3 (14-82)||(44374720-44374788)
chr3 (22-96)||(50016042-50016116)
chr3 (36-113)||(48528474-48528550)
chr3 (15-96)||(51278234-51278315)
chr3 (14-82)||(44284134-44284202)
chr3 (26-113)||(41159005-41159091)
chr3 (14-92)||(38462197-38462275)
chr3 (16-82)||(41028929-41028995)
chr3 (14-76)||(48597666-48597727)
chr3 (14-75)||(1395604-1395665)
chr3 (25-82)||(24268242-24268299)
chr3 (14-82)||(905046-905114)
chr3 (14-82)||(16790432-16790500)
chr3 (14-82)||(33307656-33307724)
chr3 (18-77)||(35127451-35127510)
chr3 (14-113)||(40122828-40122927)
chr3 (14-76)||(20192682-20192744)
chr3 (14-80)||(23793517-23793582)
chr3 (43-113)||(24158607-24158676)
chr3 (14-80)||(49586992-49587057)
chr3 (17-87)||(49772747-49772817)
chr3 (60-113)||(4534478-4534530)
chr3 (18-111)||(25185891-25185982)
chr3 (36-113)||(25964338-25964414)
chr3 (16-113)||(36193595-36193690)
chr3 (18-87)||(39971240-39971309)
chr3 (27-76)||(42039091-42039140)
chr3 (36-77)||(48816553-48816594)
chr3 (16-92)||(3015927-3016002)
chr3 (14-82)||(27792798-27792866)
chr3 (14-82)||(32703064-32703132)
chr3 (14-77)||(36783410-36783474)
[»] scaffold0024 (2 HSPs)
scaffold0024 (14-92)||(27492-27570)
scaffold0024 (42-113)||(23807-23877)
[»] scaffold0590 (1 HSPs)
scaffold0590 (25-82)||(1161-1218)
[»] scaffold0275 (1 HSPs)
scaffold0275 (25-82)||(2757-2814)
[»] scaffold0508 (1 HSPs)
scaffold0508 (14-82)||(9851-9919)
[»] chr6 (38 HSPs)
chr6 (14-82)||(7713951-7714019)
chr6 (18-82)||(24774684-24774748)
chr6 (18-82)||(29269822-29269886)
chr6 (14-82)||(29274305-29274373)
chr6 (36-92)||(31668783-31668839)
chr6 (14-82)||(31672544-31672612)
chr6 (14-114)||(281924-282027)
chr6 (27-82)||(5884947-5885002)
chr6 (18-92)||(8349744-8349818)
chr6 (18-79)||(6654544-6654605)
chr6 (14-82)||(10150328-10150399)
chr6 (26-91)||(13360652-13360717)
chr6 (36-93)||(31461593-31461650)
chr6 (14-82)||(10452436-10452504)
chr6 (14-82)||(32386639-32386707)
chr6 (18-82)||(35095007-35095071)
chr6 (22-81)||(4248885-4248944)
chr6 (17-80)||(33259744-33259807)
chr6 (14-69)||(33787821-33787876)
chr6 (36-82)||(4247732-4247778)
chr6 (14-92)||(7351684-7351762)
chr6 (14-92)||(22742282-22742360)
chr6 (17-79)||(24836278-24836340)
chr6 (64-109)||(1345211-1345255)
chr6 (25-82)||(2514628-2514685)
chr6 (21-82)||(2727939-2728000)
chr6 (42-87)||(3169349-3169394)
chr6 (37-82)||(6647315-6647360)
chr6 (15-80)||(9732404-9732469)
chr6 (17-78)||(20671944-20672005)
chr6 (14-63)||(24782004-24782053)
chr6 (37-82)||(29249400-29249445)
chr6 (18-74)||(507154-507210)
chr6 (36-92)||(1810398-1810454)
chr6 (14-82)||(3204618-3204686)
chr6 (14-82)||(3217266-3217334)
chr6 (14-81)||(6310300-6310368)
chr6 (15-75)||(29940729-29940789)
[»] scaffold0428 (1 HSPs)
scaffold0428 (17-80)||(3832-3895)
[»] scaffold0091 (1 HSPs)
scaffold0091 (28-82)||(5945-5999)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-73)||(160059-160107)


Alignment Details
Target: scaffold0014 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 116619 - 116841
Alignment:
Q  1 aacttttaacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagtt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  116619 aacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttatattaagtt 116718  T
Q  101 gtttatccaaacaaatataaaagaagattttcagaagagtgacactcacatgagtaaactggggaaggaaaggaagtaagacctatagacgagattgtaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  116719 gtttatccaaacaaatataaaagaagattttcagaagagtgacagtcacatgagtaaagtggggaaggaaaggaagtaagacctatagacgagattgtaa 116818  T
Q  201 aactggcagggggtgaaagaaat 223  Q
    |||||||||||||||||||||||    
T  116819 aactggcagggggtgaaagaaat 116841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6700 - 6922
Alignment:
Q  1 aacttttaacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagtt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  6700 aacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttatattaagtt 6799  T
Q  101 gtttatccaaacaaatataaaagaagattttcagaagagtgacactcacatgagtaaactggggaaggaaaggaagtaagacctatagacgagattgtaa 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  6800 gtttatccaaacaaatacaaaagaagattttcagaagagtgacagtcacatgagtaaagtgaggaaggaaaggaagtaagacctatagacgagattgtaa 6899  T
Q  201 aactggcagggggtgaaagaaat 223  Q
    |||||||||||||||||||||||    
T  6900 aactggcagggggtgaaagaaat 6922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37053601 - 37053511
Alignment:
Q  1 aacttttaacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgctta 91  Q
    ||||| |||| | |||||||||| |||||||| | |||||||| |||||||| |||||| |||||||||||||||||||||| ||||||||    
T  37053601 aacttataacttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtgctta 37053511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 17952777 - 17952875
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||| | |||||||| | ||||| ||||||||||| ||||| ||||| |||||| |||||||||| ||||||| |||||| || |||| |||||||    
T  17952777 tatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtgctt-tattaaattttttaaccaaaca 17952875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 38239638 - 38239705
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||| ||||| ||||||||||| ||||| |||||||||| |||||| ||||| |||||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacacttacatgatgagtgcttat 38239705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 10150751 - 10150651
Alignment:
Q  12 tctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaa 111  Q
    ||||||||||| |||| || | | ||||| |||| |||||| ||||  |||||||||| ||||||||| || |||||||| ||||||||||||||| |||    
T  10150751 tctatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataaacacttatataataagtgctta-attaagttgtttatctaaa 10150653  T
Q  112 ca 113  Q
    ||    
T  10150652 ca 10150651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 37766789 - 37766724
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| |||||||| | |||||||||||| ||| |||||| | |||||||||||||||||||||    
T  37766789 gaaaacattttgactttattttattttttgtcatatgaatagctaatacataagcacttatatgat 37766724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3673814 - 3673734
Alignment:
Q  1 aacttttaacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    ||||| |||| | |||||||||||||| |||| | ||||| ||||||||||| ||||  | ||||||||||||||||||||    
T  3673814 aacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 33267592 - 33267660
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||| |||| | |||| | |||||||||| ||||| |||||||||||||||||||||||    
T  33267592 tatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttatatgat 33267660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 7936998 - 7936922
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| | |  ||  |||| |||||||||||||||||||||    
T  7936998 tttatcttttgttatagaaatggtttatacataagcacttatgttaaaagcactta-attaagttgtttatccaaaca 7936922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 11344360 - 11344425
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    |||||||||||||||||||   ||||| ||||||||||| ||||  |||| |||||||||||||||    
T  11344360 tatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatat 11344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 26484193 - 26484257
Alignment:
Q  47 ttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaac 112  Q
    |||||| ||||| |||| |||||||||||||||||| | || ||| ||||||||||||||||||||    
T  26484193 ttatagaaatagcttatccataagcacttatatgataaatgatta-attaagttgtttatccaaac 26484257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 40837504 - 40837557
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacat 67  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||| ||||||||    
T  40837504 tatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 28933817 - 28933753
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    ||||||| ||||||| |||| ||||| ||||||||||  ||||| |||||||| |||||||||||    
T  28933817 atgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 41240975 - 41241031
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| |||||||||||||||||||||||||||| |||| | ||| | |||||||||    
T  41240975 tttatattttgttataggaatagtttatacataaccactcacatggtaagtgcttat 41241031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10143162 - 10143103
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    |||||| |||||||| | ||||| ||||||||||| ||||  ||||||||||||||||||    
T  10143162 aaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 10190244 - 10190205
Alignment:
Q  43 tttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  10190244 tttgttataaaaatagtttatacataagcacttatatgat 10190205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 31461423 - 31461364
Alignment:
Q  23 aatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| | ||||| ||||||||||| ||||| ||||| |||| ||||||||||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgat 31461364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 33197320 - 33197383
Alignment:
Q  19 aaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| ||||||| | | ||| ||||||||||| ||||| ||||| |||||||||||||||||    
T  33197320 aaacaacttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgat 33197383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 34339114 - 34339039
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||| | |||||| | ||||| ||| | ||||| || |||||||||||||||||||||||||| |||| ||||    
T  34339114 gaaaacagtctgactttattttatctttagctatagaaaaagtttatacataagcacttatatgataagtgtttat 34339039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 9878055 - 9878085
Alignment:
Q  54 aatagtttatacataagcacttatatgatta 84  Q
    |||||||||||||||||||||||||||||||    
T  9878055 aatagtttatacataagcacttatatgatta 9878085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 13866879 - 13866825
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagca 72  Q
    |||||| |||||||| | ||||| ||||| ||||| |||||||||||||||||||    
T  13866879 aaaacagtttgacttaattttatcttttgctatagaaatagtttatacataagca 13866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 26522728 - 26522762
Alignment:
Q  42 ttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||||| |||||||||||||||||||||||    
T  26522728 ttttgttatagaaatagtttatacataagcactta 26522762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 32098384 - 32098442
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagca 72  Q
    |||||||||| |||||||| | ||||| ||||||||||| ||||| ||||| |||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 42974318 - 42974268
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| |||| ||||    
T  42974318 ttttgttatagaaatagtttatacacaagcactaatatgataagtgtttat 42974268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 9404553 - 9404516
Alignment:
Q  55 atagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  9404553 atagtttatacataagcacttatatgataagtgtttat 9404516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 14277981 - 14278034
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttata 78  Q
    |||||||| | || || ||| ||||||| |||||||||||||||||||||||||    
T  14277981 tttgactttatttaatgtttagttatagaaatagtttatacataagcacttata 14278034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 35459901 - 35459836
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||| | ||||| ||||| ||||  ||||| ||||||| || ||||||||||||    
T  35459901 gaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgat 35459836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1493589 - 1493657
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||| | ||||| | ||||| | ||||||||| || |||||||| ||||||| |||||||||    
T  1493589 tatgaaaacaactagactttattttatctattgttatagaaagagtttataaataagcaattatatgat 1493657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 11513892 - 11513817
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||||||||||| | ||||| |||||||   | ||||  |||||||||| | |||||||||| |||||||||    
T  11513892 tatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataaacccttatatgataagtgcttat 11513817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 18962114 - 18962182
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||| |||| | ||||| ||||||||||  ||||| | ||||||||||||||| |||||    
T  18962114 tatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatgat 18962182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 25609787 - 25609727
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    ||||| || ||||||| | ||||| |||| |||||| ||||| ||||||||||||||||||    
T  25609787 gaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28803582 - 28803650
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| || |||||||| | ||||| ||||||||| | ||||  ||||| |||||||||||||||||    
T  28803582 tatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgat 28803650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 35713213 - 35713149
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| |||| ||| | ||| ||||||||||  | |||||||||||||||| ||||||||||||    
T  35713213 aaaacagtttgccttaactttcttttttgttacggaaatagtttatacataaacacttatatgat 35713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 37518901 - 37518965
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    ||||||||||||| |||| |  | |||||||||||||| ||||| |||  |||||||||||||||    
T  37518901 atgaaaacaattttacttcacatcattttttgttatagaaatagattaaccataagcacttatat 37518965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 38355212 - 38355145
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||  | ||||||||  ||||||| ||||| ||||| ||||| |||||||||||    
T  38355212 tatgaaaacaatttgactctattttattttacgttatagaaatagcttata-ataagtacttatatgat 38355145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 41033048 - 41033088
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||| ||||||||||| ||||| |||||||||||||||||    
T  41033048 tttatcttttgttatagaaatagcttatacataagcactta 41033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14482192 - 14482128
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgat 14482128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 8536125 - 8536191
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    ||||||||||||||||||| | ||| | ||||||||||| ||||| ||||||||||||||||||||||    
T  8536125 tatgaaaacaatttgacttcacttt-tattttgttatagaaatagcttatacataagcacttatatga 8536191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 37444494 - 37444570
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat-atgattagtgcttat 92  Q
    ||||||||||| |||| | ||||| ||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||    
T  37444494 gaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatcatgataagtgcttat 37444570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 38036192 - 38036252
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttata 78  Q
    |||||||||||| || | |||||||||||||| |  |||||||||||||||||||||||||    
T  38036192 aaaacaatttgaatttattttattttttgttaaataaatagtttatacataagcacttata 38036252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 34770885 - 34770818
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||||| | ||||| |||||| || | |||||||| |||||||||||||| |||||    
T  34770885 atgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacataagcacttacatgat 34770818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 42597394 - 42597331
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttata 78  Q
    ||||||||||||| |||| | ||||| ||||||||||| ||||| ||||||||||| |||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 10488478 - 10488418
Alignment:
Q  19 aaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||| ||||| ||||| |||||   |||||||||||||| ||||||||||||    
T  10488478 aaacaatttgacttgaatttatcttttgctatag---tagtttatacataaacacttatatgat 10488418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 26813908 - 26813949
Alignment:
Q  41 tttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  26813908 tttttgttatagaaataatttatacataagcacttatatgat 26813949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 28769426 - 28769483
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | |||||  |||||||||||||||| ||||||||||||| |||||||||    
T  28769426 tttgacttaattttatagtttgttataggaatagcttatacataagcatttatatgat 28769483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 39392748 - 39392805
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | ||||| ||||||||||| |||||||||||||||  ||||||||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgat 39392805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 40356854 - 40356766
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaacaa 114  Q
    |||||||| | ||||| |||| |||||  ||||| ||||| ||||||||||||||||  |||| ||| |||||||||||||| |||||||    
T  40356854 tttgactttattttatcttttattatataaatagcttatagataagcacttatatgacaagtgttta-attaagttgtttattcaaacaa 40356766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 7026725 - 7026657
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | ||||| ||||||||||  | ||| |||| ||||||||||||||||||    
T  7026725 tatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgat 7026657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 5226582 - 5226528
Alignment:
Q  28 gacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| ||||| ||||||||| | ||| |||||||||||| ||||||||||||    
T  5226582 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgat 5226528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 8629075 - 8629001
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtgcttata-ttaagttgtttatccaaacaaa 115  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| |   |||||| ||||  ||||||||||||||||    
T  8629075 ttttgttatagaaatagcttataaataagcacttatatgataaacacttatacttaaaatgtttatccaaacaaa 8629001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 13561388 - 13561466
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||||||||||| | || ||||| |||||||| ||||| |||| |||| | |||| |||||| |||| ||||    
T  13561388 tatgaaaacaatttgactttatttaattttctgttatagaaatagcttattcatatgtacttttatgatgagtgtttat 13561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 31884588 - 31884510
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||||||  | |||| ||||| ||||||||||| ||||  ||||||||| |||||| |||||| || ||||||    
T  31884588 tatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataagcgcttat 31884510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 8603654 - 8603617
Alignment:
Q  55 atagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||||||||||||||||||| | |||||||||    
T  8603654 atagtttatacataagcacttatatggtaagtgcttat 8603617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 13652209 - 13652141
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | |  || ||||| ||||| ||||| ||||||||||||||||| |||||    
T  13652209 tatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcacttagatgat 13652141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 13710852 - 13710784
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | |  || ||||| ||||| ||||| ||||||||||||||||| |||||    
T  13710852 tatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcacttagatgat 13710784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 27320288 - 27320232
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||| ||||||||||| |||||| ||||||||||| |||| |||| ||||    
T  27320288 tttatcttttgctataggaatagcttatacgtaagcacttatgtgataagtgtttat 27320232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 35534941 - 35535005
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| |||||||| | ||||  |||| |||||| ||||| ||||| |||||||||||||||||    
T  35534941 aaaacagtttgactttattttaacttttattatagaaatagcttatatataagcacttatatgat 35535005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 35869809 - 35869753
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||| ||| ||| | ||||||||||| ||||||||||| |||||||||    
T  35869809 tttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttat 35869753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 40280281 - 40280349
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | ||||| ||||||| ||| ||||  ||||| ||| |||||||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatgat 40280349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 42370448 - 42370535
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||| | ||||| |||||||| ||  | || ||||||||||||||  ||||||| || |||| ||||||| ||||||||||||||    
T  42370448 tttgactttactttatattttgttacagatacagcttatacataagcacgcatatgataagagctt-tattaagctgtttatccaaaca 42370535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 36638718 - 36638644
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaa 111  Q
    ||||| ||||||||||| |||||||||||||| | ||| |||||||| |||||||| |||||||||||||||||||    
T  36638718 tttatcttttgttatagaaatagtttatacattaacacctatatgataagtgctta-attaagttgtttatccaaa 36638644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 35095864 - 35095936
Alignment:
Q  19 aaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgctta 91  Q
    |||||||||||||| | ||||| ||||||||||| ||||||||| | ||||||||||||||||| || |||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcgctta 35095936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 12975341 - 12975278
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    |||||||||||||||| || | |||||| ||||||||||||||||||| || ||||||||||||    
T  12975341 tatgaaaacaatttgattttattttattctttgttataggaatagtttgtatataagcacttat 12975278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 37063150 - 37063217
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||||||| | |||||||| | ||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  37063150 tatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatga 37063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 11095574 - 11095643
Alignment:
Q  43 tttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||||| |||||||||||||||| |||||||||| | |||| |||  ||||||||||||||||||||    
T  11095574 tttgttatagaaatagtttatacataatcacttatatggtaagtgttta-gttaagttgtttatccaaaca 11095643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 19177473 - 19177405
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| || ||||| | ||||| || |||| ||| |||||||||||||||||||||||||||||    
T  19177473 tatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgat 19177405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28586842 - 28586910
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||||| ||||||||||| |||||| ||||||||| ||| ||||||||    
T  28586842 tatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgat 28586910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 31694508 - 31694444
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| |||||||| ||||||| |||||||||||  |||| |||| ||||||||||||||||||    
T  31694508 aaaacagtttgactttagtttatgttttgttatagacatagcttattcataagcacttatatgat 31694444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 7096214 - 7096273
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgatta 84  Q
    |||||||| | ||||| ||||||||||| ||||| |||||||||||||||| ||||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgatta 7096273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 19113215 - 19113261
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  19113215 tttattttttgttataaaaatagtttatacataagcaattatatgat 19113261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 32172647 - 32172569
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||| |||||| ||||||| | ||||| ||||||| ||| |||||||||||||||||| ||| |||||| || ||||||    
T  32172647 tatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttat 32172569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 37968887 - 37968814
Alignment:
Q  12 tctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattag 85  Q
    |||||||||||| |||||| | | ||||| ||||||||||| ||||| |||||| ||||| || ||||||||||    
T  37968887 tctatgaaaacactttgacctcattttatcttttgttatagaaatagcttatacctaagccctcatatgattag 37968814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 40499764 - 40499848
Alignment:
Q  27 tgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaac 112  Q
    |||||||| |||||  |||||||||| ||||  || |||||||||||||||||||| ||   ||| ||||||||||||||||||||    
T  40499764 tgacttgactttatcatttgttatagaaataacttgtacataagcacttatatgataagctttta-attaagttgtttatccaaac 40499848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4855705 - 4855594
Alignment:
Q  1 aacttttaacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagtt 100  Q
    ||||| |||| | ||||| |||||||| |||| | ||||||||||||||||  ||||| | ||||||||| ||||||   || |||  ||| ||||||||    
T  4855705 aacttataacttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataagtacttatgctataagtattta-attaagtt 4855607  T
Q  101 gtttatccaaaca 113  Q
    |||||||||||||    
T  4855606 gtttatccaaaca 4855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 10303794 - 10303739
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagc 71  Q
    |||||||||||||||||| | ||||| ||||||||||| ||||||||| ||||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaatagttta-acataagc 10303739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 16889731 - 16889671
Alignment:
Q  12 tctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagca 72  Q
    ||||| |||||| |||||||| ||||||| ||||||||| | ||||| |||||||||||||    
T  16889731 tctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 20982223 - 20982279
Alignment:
Q  26 ttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| | |||||  |||||||||| ||||| |||||||||||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgat 20982279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 26516270 - 26516214
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||||| || ||||||    
T  26516270 tttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttat 26516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 34198380 - 34198333
Alignment:
Q  63 tacataagcacttatatgattagtgcttatattaagttgtttatccaaa 111  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  34198380 tacataagcacttatatgataagtgctta-attaagttgattatccaaa 34198333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 38819673 - 38819729
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||| |||||  ||||||||||| |||||||||| |||||||||    
T  38819673 tttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttat 38819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 29588852 - 29588809
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatat 79  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||    
T  29588852 tttatattttgttatagaaatagcttatacataagcacttatat 29588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 39128627 - 39128568
Alignment:
Q  20 aacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    ||||||||||||| | ||||| ||||||||||| | ||| |||||||||||||| |||||    
T  39128627 aacaatttgactttattttatcttttgttatagaattagcttatacataagcacatatat 39128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 13224401 - 13224355
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||| ||||||||||| ||||| |||||||||||||||| ||||||    
T  13224401 tttatcttttgttatagaaatagcttatacataagcacttctatgat 13224355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 35135738 - 35135804
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    |||||||| | |||||||| | ||||| ||||||||||| ||||  |||||||||| ||||||||||    
T  35135738 tatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 6738484 - 6738561
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||| |||||||||| | ||| | |||| |||| | ||||| ||||||||||| ||||||||||| |||| ||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttat 6738561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 32194157 - 32194226
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaa-tagtttatacataagcacttatatgat 82  Q
    ||||||||||  ||||||| | ||||| |||||||||| ||| |||| ||| ||||||||||||||||||    
T  32194157 tatgaaaacatcttgactttattttatattttgttataagaagtagtgtatgcataagcacttatatgat 32194226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 10391325 - 10391269
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||  ||||| |||||| |||||||||||||||| |||| ||||    
T  10391325 tttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtgtttat 10391269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 11835268 - 11835208
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    ||||||||||| |||| | ||||| ||||||||||  ||| |||||||||||| |||||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 37611269 - 37611334
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||||||||||||||| |||| ||| |||| |  ||||| ||||| || |||||||||||||||||||    
T  37611269 tatgaaaacaatttgatttgattttcttttat--tatagaaatagcttttacataagcacttatatga 37611334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 37787999 - 37788064
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||||||||||||||| |||| ||| |||| |  ||||| ||||| || |||||||||||||||||||    
T  37787999 tatgaaaacaatttgatttgattttcttttat--tatagaaatagcttttacataagcacttatatga 37788064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 30496695 - 30496630
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||| | ||||| ||||||||||| |||||||||||||||| ||||||| ||||    
T  30496695 gaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgat 30496630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 35536101 - 35536011
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgttta 105  Q
    ||||||||||||||||||| | ||||| || |||||||| ||||| ||||||||||||  ||||||||| || ||| | |||||||||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagcgctca-attaagttgttta 35536011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 992064 - 991964
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||| | |||| ||| | ||||||||||||||||| || |  |||||| |||||||||||||||| |   |||| |||||| ||||||||||||||    
T  992064 tatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatgataaacacttaaattaaggtgtttatccaaaca 991965  T
Q  114 a 114  Q
    |    
T  991964 a 991964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 5369767 - 5369863
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||||| |||||||| |  ||| ||||| |||||| | ||| |||||||||||||||||| || | |||||||| ||||| |||||||||||||||    
T  5369767 tatgaaaacagtttgacttta--ttaattttttttatagaattagcttatacataagcacttatttgctaagtgctta-attaaattgtttatccaaaca 5369863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 7244696 - 7244628
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||||||||   ||||| ||||| ||||| ||||| |||||||||||||||||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgat 7244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 24973938 - 24973870
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||| ||||||||||| || | ||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  24973938 tatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 27121662 - 27121759
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||||||||||||||| | |||||  ||| |||||| ||||  ||||||||||| | ||||||||| || |||  ||||||||||| ||||||||||    
T  27121662 tatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataaggaattatatgataagcgct--tattaagttgtgtatccaaaca 27121759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 33894616 - 33894549
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||||| ||||||||||| ||||| ||||||||||||||||| |||||    
T  33894616 tatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcacttacatgat 33894549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 45593795 - 45593863
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||||| |||||||| || ||||| ||||||||||||| |||||||||    
T  45593795 tatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgat 45593863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 46056119 - 46056182
Alignment:
Q  49 ataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||| ||||||||| ||||||||||||| ||||| | |||||| |||||||||||||||||||||    
T  46056119 atagaaatagtttacacataagcacttaaatgataaatgctta-attaagttgtttatccaaaca 46056182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 49060530 - 49060466
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||| |||||||||| | ||||||||||||||||| ||||| ||||||||||  |||||||||||    
T  49060530 aaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgat 49060466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 1417258 - 1417203
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataa 69  Q
    ||||||||||||||||||| | ||||| ||||||||||  ||||||||||||||||    
T  1417258 tatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 5006585 - 5006639
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacata 68  Q
    |||||||||| |||||||| | ||||| ||||||||||||||||| |||||||||    
T  5006585 tatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 48496667 - 48496600
Alignment:
Q  44 ttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||| ||| ||||||||||||||||  ||||||||||| |||||||| || ||||||||||||||||||    
T  48496667 ttgttgtagaaatagtttatacataaa-acttatatgataagtgctta-atcaagttgtttatccaaaca 48496600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2223138 - 2223078
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttata 78  Q
    |||||||||||||||   ||||| ||||||||||| ||||| |||||||||| ||||||||    
T  2223138 aaaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacacttata 2223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 3241435 - 3241367
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||| | ||||||||||| ||||| || || |||||||||||||||||    
T  3241435 tatgaaaacagtttgactttattttttattttgttatagaaatagcttctatataagcacttatatgat 3241367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 27492761 - 27492721
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  27492761 ttttgttatagaaatagtttatacataagaacttatatgat 27492721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 30751511 - 30751443
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| |||||||||| | ||||| |||||||| |  |||||||||| || |||||||||||||||    
T  30751511 tatgaaaataatttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgat 30751443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 47007014 - 47006974
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  47007014 ttttgttatagaaaaagtttatacataagcacttatatgat 47006974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 3610820 - 3610883
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||||| |||| ||| | ||||| ||||||| ||| ||||| ||||||||||||||||||||||    
T  3610820 aaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagcacttatatga 3610883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 5272896 - 5272951
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataa 69  Q
    |||||||||||| |||||| | ||||| ||||||||||  ||||||||||||||||    
T  5272896 tatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataa 5272951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39539837 - 39539935
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||||||||||| || | |||   |||| |||| | ||||| ||||||| ||||| ||||||||| ||  |||| |||||||||||||||||||||    
T  39539837 tatgaaaacaatttgaatttattttcacttttattatcgaaatagcttatacaaaagcagttatatgataagcactta-attaagttgtttatccaaaca 39539935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 47559711 - 47559766
Alignment:
Q  41 tttttgttataggaatagtttatacataagcacttatatgattagtgcttatatta 96  Q
    |||||||| ||| ||||  |||| ||||||||||||||||||||||| ||||||||    
T  47559711 tttttgttgtagaaataacttattcataagcacttatatgattagtgtttatatta 47559766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 28165081 - 28165023
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||||||||| | ||||| ||||||||||| || |  |||||||||||||||||    
T  28165081 aaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 28178964 - 28178910
Alignment:
Q  13 ctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacat 67  Q
    ||||||||||||| |||||| | ||||| ||||||||||| ||||| ||||||||    
T  28178964 ctatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 46213775 - 46213729
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  46213775 tttatattttgttatagaaatagcttttacataagcacttatatgat 46213729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 45078260 - 45078219
Alignment:
Q  41 tttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  45078260 tttttgttataaaaatagcttatacataagcacttatatgat 45078219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 22388002 - 22388058
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||| ||||| |||| |||||||||||| ||||| |||| ||||    
T  22388002 tttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttat 22388058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 37832218 - 37832278
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    ||||||||| | |||| | ||||| ||||| ||||| ||||||||||||| ||||||||||    
T  37832218 gaaaacaatctaactttattttatattttgctatagaaatagtttatacacaagcacttat 37832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 39551624 - 39551692
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||| |||| ||| ||| ||||||||||| ||||| |||||| |||  |||||||||||    
T  39551624 tatgaaaacagttttactttagtatatcttttgttatagaaatagcttatacttaaatacttatatgat 39551692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 40439018 - 40438986
Alignment:
Q  60 ttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||||||||||||||||||||| ||||    
T  40439018 ttatacataagcacttatatgattagtgtttat 40438986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 46091590 - 46091530
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcact 74  Q
    |||||||||||||| | || | ||||| ||| ||||||||||||| |||| ||||||||||    
T  46091590 tatgaaaacaattttattttattttatctttcgttataggaatagcttatgcataagcact 46091530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 47037843 - 47037807
Alignment:
Q  54 aatagtttatacataagcacttatatgattagtgctt 90  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  47037843 aatagtttacacataagcacttatatgataagtgctt 47037807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 871039 - 870962
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgctta 91  Q
    |||||||| || ||||||| | ||||| ||||||||||  ||||||||||||||||||||||||||||| || |||||    
T  871039 tatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataagcgctta 870962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 6933030 - 6933110
Alignment:
Q  7 taacctctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    |||| ||||||||||||||||||||| | ||||| ||||||||||  ||| | |||||||| ||||||||| |||||||||    
T  6933030 taacttctatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacatgagcacttatttgattagtg 6933110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38651485 - 38651553
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||| ||||| ||||||| ||||||||||| | ||| ||||||||||||||||| |||||    
T  38651485 tatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcacttacatgat 38651553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 24857621 - 24857668
Alignment:
Q  45 tgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24857621 tgttatagaaatagtttatacataaacacttatatgattagtgcttat 24857668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 49560635 - 49560709
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgc 88  Q
    |||||||||||||||| ||  |||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||    
T  49560635 tatgaaaacaatttgaatttggtttatcttttgttatataaatatattatatataagcacttatatgattagtgc 49560709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 41638432 - 41638484
Alignment:
Q  60 ttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  41638432 ttatacataagcacttatatgataagtgctta-atcaagttgtttatccaaaca 41638484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 4202207 - 4202302
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaac 112  Q
    ||||||||  |||||||  |||||| ||||||||||| ||||  |||||| |||||||||||||||| |  ||||| ||||||||| ||||||||||    
T  4202207 tgaaaacagcttgactttggtttatcttttgttatagaaataacttatacttaagcacttatatgataaacgctta-attaagttgcttatccaaac 4202302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 6659675 - 6659629
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  6659675 tttatcttttgctatagaaatagtttatacataagcacttatatgat 6659629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 13037841 - 13037791
Alignment:
Q  31 ttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  13037841 ttgactttatcttttgttatagaaatagcttatacataagcacttatatga 13037791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 29046010 - 29046087
Alignment:
Q  35 gtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||| ||||||||||| ||||  ||||||| ||||||||||| ||| |||||||| |||||  ||||||||||||||    
T  29046010 gtttatcttttgttatagaaatatcttatacacaagcacttatacgataagtgctta-attaatctgtttatccaaaca 29046087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 46499934 - 46499996
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    ||||||||||||||| | ||||| |||| |||||| ||||| ||||| |||||||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 37841989 - 37841913
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat-atgattagtgcttat 92  Q
    ||||||||||| |||| | |||||  |||||||||||||||| |||||||| || |||||| ||||| |||||||||    
T  37841989 gaaaacaatttaactttattttatcatttgttataggaatagcttatacatgagtacttatcatgataagtgcttat 37841913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44032075 - 44032143
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | ||||  ||||||||||| ||  | |||||||||| ||||||||||||    
T  44032075 tatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgat 44032143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 50319286 - 50319230
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataag 70  Q
    ||||||||||| ||||||| | ||||| ||||||||||| ||||| |||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 17269244 - 17269177
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    ||||||||||||||||||| | |||   ||||||| ||| ||||  ||||||||||||||||||||||    
T  17269244 tatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 24702243 - 24702157
Alignment:
Q  26 ttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||| | || |||||||||||||| ||||| ||||| | |||||||||| | | ||||||||| |||||| | ||||||||||||    
T  24702243 ttgactttatttaattttttgttatagaaatagcttatagagaagcacttatgtaactagtgctta-attaagatatttatccaaaca 24702157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26184746 - 26184683
Alignment:
Q  13 ctatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||| |||||||||| | ||||  |||| |||||| ||||||||||||||||| |||||    
T  26184746 ctatgaaaataatttgactttattttaccttttcttatagaaatagtttatacataagtactta 26184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 4200223 - 4200145
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||| ||||||| | ||||| ||||||||||  ||||  ||||| |||| |||||| ||||| |||||||||    
T  4200223 tatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttat 4200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 15437955 - 15437889
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| |||||||| | ||||||||||||||||| ||||| || ||||||| ||| || |||||    
T  15437955 tgaaaacagtttgacttaattttattttttgttatagaaatagcttttacataaacacatagatgat 15437889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 23895330 - 23895252
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| |||| ||||| || | ||||| ||||||||||| ||||| ||||||||||  ||||||||||| || ||||||    
T  23895330 tatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttat 23895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 26293182 - 26293231
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttat 63  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||| ||||    
T  26293182 tatgaaaacaatttgactttattttactttttgttatagaaatagcttat 26293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 7274015 - 7274083
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | || || ||||||||||  ||||   |||||||||||| |||||||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgat 7274083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 15361707 - 15361644
Alignment:
Q  14 tatgaaaacaatttgacttgagtttatttt--ttgttataggaatagtttatacataagcactt 75  Q
    |||||||| |||||||||| | ||||| ||  ||||||||| ||||||||| ||||||||||||    
T  15361707 tatgaaaataatttgactttactttatcttctttgttatagaaatagtttacacataagcactt 15361644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 15579445 - 15579377
Alignment:
Q  46 gttataggaatagtttatacataagcacttatatg-attagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||| ||||| ||||||||||||||||| ||| || ||  || |||||||| ||||||||||||||    
T  15579445 gttatagaaatagcttatacataagcacttacatgaataagcactcatattaagctgtttatccaaaca 15579377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 21002143 - 21002075
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagt 86  Q
    |||||| |||||||| | ||||| || |||||   ||| || |||||||||||||||||||||||||||    
T  21002143 aaaacagtttgactttattttatattatgttaccagaacagcttatacataagcacttatatgattagt 21002075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 36151584 - 36151636
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataa 69  Q
    |||||||||||||||| | ||||| ||||||||| | ||||| ||||||||||    
T  36151584 gaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 40357963 - 40358027
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    |||||||||||||||||| | |||||   ||||||||| ||||| |||||||||  |||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacatagtcacttatat 40358027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 45107616 - 45107549
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | |||||||| | |||||||||  |||||| ||||| ||||| |||||||||||||||||    
T  45107616 tatgaaaatagtttgactttattttatttttc-ttatagaaatagcttatagataagcacttatatgat 45107549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 48748659 - 48748726
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | || || |||||| |||| ||||| |||||||||||||| ||||||||    
T  48748659 tatgaaaacaatttaactttatttcatcttttgt-atagaaatagcttatacataagcacatatatgat 48748726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 54325113 - 54325181
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||||| |||||| |||| ||||||||||||| |||||||||||||||    
T  54325113 tatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgat 54325181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 45128386 - 45128465
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttata 93  Q
    ||||| || ||||||| |||| ||||| ||||||||||| |||||||||||||||||  |||||||||| || |||||||    
T  45128386 tatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataagttcttatatgataagggcttata 45128465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 44319943 - 44319866
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||| || ||||| | ||||| |||| |||||| |||||||||||||| |||||||||||||| |||||||||    
T  44319943 tatgaaaacagttcgactttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataagtgcttat 44319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 4191734 - 4191665
Alignment:
Q  14 tatgaaaacaatttgacttgagttt-attttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | ||| || ||||||||||| ||||| |||||||||||||||||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgat 4191665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 47970310 - 47970245
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    |||||| | |||||||| | ||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 19422401 - 19422314
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||| | | ||| ||||||||||| ||||  ||||||||||||| ||||||||| || ||||| |||||| ||||||||||||||    
T  19422401 tttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgctta-attaagctgtttatccaaaca 19422314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 2980572 - 2980615
Alignment:
Q  39 attttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  2980572 attttttgttatagaaatagcttatacataagcacttatatgat 2980615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 51555948 - 51556011
Alignment:
Q  19 aaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| |||||| | ||||| ||||||||||  ||||| |||||||||||||||||||||||    
T  51555948 aaacaatctgactttattttatcttttgttataataatagcttatacataagcacttatatgat 51556011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 9843775 - 9843840
Alignment:
Q  47 ttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||| ||||| ||||||||||||| ||||||||| ||  ||||| ||||||||||||||||||||    
T  9843775 ttatagaaatagcttatacataagcagttatatgataagcacttat-ttaagttgtttatccaaaca 9843840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 30207647 - 30207731
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagtt 100  Q
    |||||||||| ||||| || | ||||||||||||||||| | ||   |||||||||||||||||||||| |||||||| ||||||||    
T  30207647 tatgaaaacagtttgattt-attttattttttgttatagaactaacatatacataagcacttatatgataagtgctta-attaagtt 30207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 25487621 - 25487698
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgctta 91  Q
    |||||||| ||  |||||| | ||||||||||||||||| ||||| ||||||||||||| ||| | ||| ||||||||    
T  25487621 tatgaaaaaaacgtgactttattttattttttgttatagaaatagcttatacataagcatttaaaggataagtgctta 25487698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 3662338 - 3662283
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcact 74  Q
    |||||| |||||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  3662338 aaaacagtttgactttattttatcttttgttataggaatagtttat-cataagcact 3662283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 22684592 - 22684660
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | ||||   |||||||||| ||||| ||||||| ||||| |||||||||    
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgat 22684660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 30024694 - 30024626
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||| |||| | ||||| ||||||||||| ||||  |||| |||||| |||||||||||    
T  30024694 tatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgat 30024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 36734887 - 36734819
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | |||||||| | ||||  ||||||||||| || || |||||||||||||||||||||||    
T  36734887 tatgaaaatagtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgat 36734819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 21157761 - 21157694
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||| |||||||| |||||||  ||||||||   ||||| | |||||||||||||||||||||    
T  21157761 atgaaaacagtttgactttagtttatactttgttatcaaaatagctgatacataagcacttatatgat 21157694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 23503549 - 23503470
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat-atgattagtgcttatatta 96  Q
    |||| ||||| |||| | ||||| ||||||||||| | ||| |||||||||||||||||| ||||| || ||||||||||    
T  23503549 aaaataatttaactttattttatattttgttatagaattagattatacataagcacttatcatgataagcgcttatatta 23503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 30338668 - 30338727
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcac 73  Q
    |||||||||| ||| |||| | | ||| ||||||||||| ||||||||||||||||||||    
T  30338668 tatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 51044534 - 51044597
Alignment:
Q  14 tatgaaaacaa-tttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||||| |||||||| | ||||| ||||||||||| ||||| |||||||||| ||||||    
T  51044534 tatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 3891540 - 3891498
Alignment:
Q  45 tgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    |||||||| |||||||||| |||||||||||||||||| ||||    
T  3891540 tgttatagaaatagtttattcataagcacttatatgataagtg 3891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 4071876 - 4071811
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    |||||||| |||||||||| | ||||| ||||||||||| ||||| ||||| |||| ||||||||||    
T  4071876 tatgaaaataatttgactttattttatcttttgttatagaaatag-ttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 7368132 - 7368194
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||||||||||||| | |||| ||||| | |||| |||||||||| ||||||| ||||    
T  7368132 tatgaaaacaatttgactttattttactttttatcatagaaatagtttattcataagcgctta 7368194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 21593099 - 21593149
Alignment:
Q  26 ttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||| | ||||| ||| ||||||| |||||||||||||||||||||||    
T  21593099 ttgactttattttatctttagttatagaaatagtttatacataagcactta 21593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 41088373 - 41088311
Alignment:
Q  19 aaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    ||||||||| |||| | ||||| ||||||| |   ||||||||||||||||||||||||||||    
T  41088373 aaacaattttactttattttatcttttgttgtgaaaatagtttatacataagcacttatatga 41088311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 969449 - 969517
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaa 111  Q
    |||| |||||| ||| | ||||| ||||||||||||||||| || ||||  |||||||||||||||||||    
T  969449 ttttattatagaaattgcttatagataagcacttatatgataagcgctt-gattaagttgtttatccaaa 969517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 24160983 - 24160926
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagca 72  Q
    ||||||| ||||| |||||| |||||  |||||||||| ||||| |||||||||||||    
T  24160983 atgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataagca 24160926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 41050662 - 41050617
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||    
T  41050662 ttttgttatagaaatagtttatacattaacacttatatgataagtg 41050617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 54986415 - 54986347
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgatt 83  Q
    ||||||| ||||||||||| |  |||||||| ||||||| ||||| ||||||||||  ||||||||||||    
T  54986415 tatgaaagcaatttgactttatcttattttt-gttatagaaatagcttatacataaaaacttatatgatt 54986347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 486073 - 485997
Alignment:
Q  17 gaaaacaatttgacttg-agtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||||||||  | ||||| ||||||| ||| |||||  ||||||||||||||| |||||| || ||||||    
T  486073 gaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttat 485997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 4471143 - 4471087
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||  |||||||||| ||||||||||||||| || | |||||||    
T  4471143 tttatcttttgttataaaaatagtttatgcataagcacttatataataattgcttat 4471087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 24444010 - 24443954
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||| ||| ||| | ||||||||||| ||||||||||| |||||||||    
T  24444010 tttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttat 24443954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 24929487 - 24929419
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| || ||||| | ||||| ||||||||||| ||||||| ||||| || || |||||||||    
T  24929487 tatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgat 24929419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 49219133 - 49219065
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| |||||||||| | ||||| ||||||||||| ||||  |||||| ||| |||| |||||||    
T  49219133 tatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccactcatatgat 49219065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44374720 - 44374788
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | ||||| |||||||| ||  |||| |||||||||||||||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgat 44374788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 50016042 - 50016116
Alignment:
Q  22 caatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatatta 96  Q
    ||||||||||| | ||||| ||| ||||||| ||||||  ||||||||||||||||||||| || ||||||||||    
T  50016042 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataagggcttatatta 50016116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 48528550 - 48528474
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||| ||||||||| ||||| ||||||||||| ||||||||||| ||  |||| ||| |||||||||||||||||    
T  48528550 tttatttcttgttatagaaatagcttatacataagtacttatatgataagctctta-attcagttgtttatccaaaca 48528474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 51278234 - 51278315
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatatta 96  Q
    ||||||||| |||||||| | || || ||||||||||| ||||| |||||||| |||| ||||||||| | |||||||||||    
T  51278234 atgaaaacagtttgactttatttaatattttgttatagaaatagcttatacattagcaattatatgataaatgcttatatta 51278315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44284134 - 44284202
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||||||||   ||||||||||||||||| ||||| |||||||| || |||||||||||    
T  44284134 tatgaaaacagtttgactttgttttattttttgttatagaaatagcttatacattagtacttatatgat 44284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 41159091 - 41159005
Alignment:
Q  26 ttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||| | ||||| ||| ||||||||||||  ||||||||||||||||||| ||| || | ||| ||||||||| |||||||||||    
T  41159091 ttgactttattttatctttagttataggaataacttatacataagcacttatacgataagcgttta-attaagttggttatccaaaca 41159005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38462275 - 38462197
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||| |||||||| | ||||| ||||| ||||| ||||| ||||| |||| |||||||||||| |||| ||||    
T  38462275 tatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataagtgtttat 38462197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 41028929 - 41028995
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||  ||||||| | ||| | ||||||||||| ||||| |||||||||||||||||||||||    
T  41028929 tgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgat 41028995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 48597666 - 48597727
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    ||||||||| ||||||||| | ||||| ||||||||||| ||||||||| |||||||||||||    
T  48597666 tatgaaaaccatttgacttaa-tttatcttttgttatagaaatagtttaaacataagcactta 48597727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 1395665 - 1395604
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactt 75  Q
    |||||||| |||||||||| | ||||| ||||||||||| ||||| ||||||||| ||||||    
T  1395665 tatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 24268242 - 24268299
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| ||||  ||||| ||||| |||||||||||||||||||||| ||||||    
T  24268242 tttgacttgattttaacttttgctatagaaatagtttatacataagcacttgtatgat 24268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 905046 - 905114
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||| |||||| ||||||| | ||||| ||||||||||| ||||| |||||| ||||| ||||||||||    
T  905046 tatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgat 905114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16790432 - 16790500
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| ||||||| || | ||||| | ||||||||  ||||| |||||||||||||||||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgat 16790500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 33307656 - 33307724
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| |||||||||| | || || ||||||||  | ||||| |||||||||||||||||||||||    
T  33307656 tatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgat 33307724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 35127451 - 35127510
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttat 77  Q
    |||||||||| |||| ||| ||| ||||||||||| |||||  |||||||||||||||||    
T  35127451 aaaacaatttaactttagtatatcttttgttatagaaatagcctatacataagcacttat 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 40122828 - 40122927
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||||| |||||||| | ||||| ||||||||| | ||||| ||||||||||| ||| ||| ||| |  | |||||||||| | ||| ||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataagtactgatacgataaacgattatattaagctctttttccaaaca 40122927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 20192682 - 20192744
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    |||||||||  |||||||| | ||||| ||||||||||  ||||| |||||||||||||||||    
T  20192682 tatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 23793582 - 23793517
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    ||||||| || |||||||| | ||||| ||||||||||  ||||||||||||||||||| |||||||    
T  23793582 tatgaaatcattttgactttattttatcttttgttataa-aatagtttatacataagcaattatatg 23793517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 24158607 - 24158676
Alignment:
Q  43 tttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||||||| ||||  ||||||||||||||||||||||  ||  |||| |||||| ||||||||||||||    
T  24158607 tttgttatagaaataacttatacataagcacttatatgacaagaactta-attaaggtgtttatccaaaca 24158676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 49586992 - 49587057
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    |||||||||| |||||||| | ||||| ||||||||||| ||||| |||||  ||||||||||||||    
T  49586992 tatgaaaacagtttgactttattttatcttttgttatagaaatagcttata-gtaagcacttatatg 49587057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 49772747 - 49772817
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    |||||||||| ||||| | |||||||||| ||| |  ||||| |||||||||| |||||||||||| ||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgataagtg 49772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 4534478 - 4534530
Alignment:
Q  60 ttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||||| ||||||||||||  || |||||||| |||||||||||||||||||||    
T  4534478 ttatacgtaagcacttatactataagtgctta-attaagttgtttatccaaaca 4534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 25185982 - 25185891
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaa 111  Q
    ||||| ||||||||| | ||||| ||||||||||  ||||  |||| |||||||||||||||||| |   |||| |||||||||||||||||||    
T  25185982 aaaaccatttgacttta-tttatcttttgttatataaatatcttattcataagcacttatatgataaacactta-attaagttgtttatccaaa 25185891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 25964414 - 25964338
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||| ||||||||||  ||||| ||||||| ||| ||||||||||| ||  |||| |||||||||||||||| ||||    
T  25964414 tttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactta-attaagttgtttatcccaaca 25964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 36193595 - 36193690
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    |||| |||||| ||||| | |||||  |||||||||| ||||  |||||||||| ||| |||||||| ||| |||| || ||||||||||||||||||    
T  36193595 tgaacacaattagacttcattttatcgtttgttatag-aataccttatacataaacacatatatgataagtacttaaat-aagttgtttatccaaaca 36193690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 39971309 - 39971240
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    ||||||||||| ||| | ||||| ||||||||||  | ||  ||||||||||||||||||||||| ||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataagtg 39971240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 42039140 - 42039091
Alignment:
Q  27 tgacttgagtttattttttgttataggaatagtttatacataagcactta 76  Q
    |||||| | |||||||||||||| || ||||| |||||||||||||||||    
T  42039140 tgactttattttattttttgttacagaaatagcttatacataagcactta 42039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 48816553 - 48816594
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttat 77  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  48816553 tttaatttttgttataggaataggttacacataagcacttat 48816594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 3015927 - 3016002
Alignment:
Q  16 tgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||| |||||||| | ||||| ||| ||||||| |||| || |||||||||||||||||| || |||| ||||    
T  3015927 tgaaaacagtttgacttcattttatcttt-gttatagaaataattaatacataagcacttatataataagtgtttat 3016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 27792866 - 27792798
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | |||||| | | ||||| ||||||| | | ||||| |||||||||||||||||||||||    
T  27792866 tatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgat 27792798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 32703132 - 32703064
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||| || | ||||| |||| | |||| ||||| |||||||||| || |||||||||    
T  32703132 tatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgat 32703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 36783410 - 36783474
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatag-tttatacataagcacttat 77  Q
    |||||||||||||| |||| | ||||| ||||| ||||| ||||| ||||||||||| |||||||    
T  36783410 tatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataaacacttat 36783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 27570 - 27492
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||||||||||| | ||||| || |||||||| ||||  ||||||||||||||||| ||||| || ||||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttat 27492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 23877 - 23807
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtgcttatattaagttgtttatccaaaca 113  Q
    ||||||||||| ||||| |||||  ||||| ||| |||||| |||| ||| |||||||||||||||||||||    
T  23877 ttttgttatagaaatagcttatatgtaagcgcttttatgataagtgttta-attaagttgtttatccaaaca 23807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 1161 - 1218
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgat 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2814 - 2757
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgat 2757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 9851 - 9919
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||  |||||||| | ||||||||||||||||| ||||  |||||||||||||| ||||||||    
T  9851 tatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgat 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 7714019 - 7713951
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | ||||| |||||||||   | |||||||||||||||| ||||||||||    
T  7714019 tatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgat 7713951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24774748 - 24774684
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| |||||||| | ||||| ||||||||||| ||||||||||| ||||||||||| |||||    
T  24774748 aaaacagtttgactttattttatattttgttatagaaatagtttatatataagcacttacatgat 24774684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29269886 - 29269822
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||| | ||||| || |||||||| ||||||||||||| ||||| |||||||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatacacaagcatttatatgat 29269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 29274305 - 29274373
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||||| | ||||| ||||| ||||| ||||| ||||||||||||| || ||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgat 29274373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 31668783 - 31668839
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||| | |||||||    
T  31668783 tttatgttttgttatagaaatagcttatacataagcacttatatgataattgcttat 31668839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 31672544 - 31672612
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| |||||||| | |||||||||||| || | |||||||||||||||| ||||| ||||||    
T  31672544 tatgaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgat 31672612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 281924 - 282027
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagttt----atacataagcacttatatgattagtgcttatattaagttgtttatcca 109  Q
    ||||||||||| ||||||| | ||||| ||||||||||||||||| ||    |||||||| |||||||| ||| | |||||| |||| |||| |||||||    
T  281924 tatgaaaacaagttgactttattttatcttttgttataggaatagcttatagatacataaacacttatacgatcattgctta-attatgttgcttatcca 282022  T
Q  110 aacaa 114  Q
    |||||    
T  282023 aacaa 282027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 5884947 - 5885002
Alignment:
Q  27 tgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||| | ||||||||||||||||| |||| |||||||||| |||||||||||||    
T  5884947 tgacttcattttattttttgttatagaaataatttatacatatgcacttatatgat 5885002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 8349744 - 8349818
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||| |||| | ||||| |||||||| || ||||||||||||| || |||||||||||| |||| ||||    
T  8349744 aaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttat 8349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 6654605 - 6654544
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    ||||||||||||||| | |||||| |||||||||| ||||  |||||||||||| |||||||    
T  6654605 aaaacaatttgacttaattttattatttgttatagaaataacttatacataagcccttatat 6654544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 10150328 - 10150399
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatag---tttatacataagcacttatatgat 82  Q
    |||||||||||||||| |||| ||||| |||||||||||  ||||   ||||||||||| ||||||||||||    
T  10150328 tatgaaaacaatttgatttgattttatattttgttatagatatagttttttatacataaacacttatatgat 10150399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 13360717 - 13360652
Alignment:
Q  26 ttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgctta 91  Q
    ||||||| | ||||| ||||||||||| ||||||||  ||||||||||||||||||| || |||||    
T  13360717 ttgactttattttatattttgttatagaaatagtttgcacataagcacttatatgataagcgctta 13360652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 31461650 - 31461593
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttata 93  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||  || ||||||||||    
T  31461650 tttatcttttgttatagaaatagcttatacataagcacttatacaataagtgcttata 31461593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 10452436 - 10452504
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | ||||| || | ||||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  10452436 tatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatgat 10452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 32386639 - 32386707
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||||||| | | ||||| |||| |||  | |||||| ||||||||||||||||||||||    
T  32386639 tatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatgat 32386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 35095007 - 35095071
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||||||| | | ||||| ||||||||||| ||| ||||||||||||  |||||||||||    
T  35095007 aaaacaatttgacattattttatattttgttatagaaatggtttatacataattacttatatgat 35095071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 4248944 - 4248885
Alignment:
Q  22 caatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatga 81  Q
    ||||||||||| | ||||| ||||||||| | ||||| ||||| ||||||||||||||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 33259807 - 33259744
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    ||||||| | |||||| | ||||| ||||||||||  ||||| |||||||||||||||||||||    
T  33259807 gaaaacagtatgacttcaatttatcttttgttataaaaatagcttatacataagcacttatatg 33259744  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 33787821 - 33787876
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataa 69  Q
    ||||||| |||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  33787821 tatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataa 33787876  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 4247732 - 4247778
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||    
T  4247732 tttatcttttgttatagaaatagcttatacataagcacttacatgat 4247778  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 7351684 - 7351762
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    |||||||||| ||| |||| | |||||  ||| |||||  ||||||||||||||||||| ||||||||| || ||||||    
T  7351684 tatgaaaacagtttaactttattttatagtttattatataaatagtttatacataagcatttatatgataagagcttat 7351762  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 22742360 - 22742282
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||||||||||||||||| | |||||  |||||||||  ||||| ||||| ||||| ||||||| ||| || ||||||    
T  22742360 tatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttat 22742282  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 24836278 - 24836340
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatat 79  Q
    |||||||||||||||| | ||||| ||||||||||| ||||  ||||||||||  ||||||||    
T  24836278 gaaaacaatttgactttattttatcttttgttatagaaataacttatacataaatacttatat 24836340  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 1345211 - 1345255
Alignment:
Q  64 acataagcacttatatgattagtgcttatattaagttgtttatcca 109  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||    
T  1345211 acataagcacttatatgattagtgctt-gattaagtagtttatcca 1345255  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2514685 - 2514628
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| | ||||| |||| |||||| ||||| ||||||||||||||||| |||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacataagcacttacatgat 2514628  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 2727939 - 2728000
Alignment:
Q  21 acaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||||| ||  |||||| ||||||||||| |  || |||||||||||||||||||||||    
T  2727939 acaatttgatttttgtttatcttttgttatagaagcagcttatacataagcacttatatgat 2728000  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 3169349 - 3169394
Alignment:
Q  42 ttttgttataggaatagtttatacataagcacttatatgattagtg 87  Q
    ||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  3169349 ttttgttatagaaataggttacacataagcacttatatgataagtg 3169394  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 6647360 - 6647315
Alignment:
Q  37 ttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||||||||| ||||  ||||||||||||||| |||||||    
T  6647360 ttattttttgttatagaaataacttatacataagcactcatatgat 6647315  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 9732469 - 9732404
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    |||||||||||||||||| | |||||  |||  ||||| ||||| |||| ||||||||||||||||    
T  9732469 atgaaaacaatttgacttaattttatcctttaatatagaaatagcttatgcataagcacttatatg 9732404  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 20671944 - 20672005
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttata 78  Q
    |||||||||||||||| | ||||| ||||| | ||| ||||| |||||||||| ||||||||    
T  20671944 gaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttata 20672005  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 24782053 - 24782004
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttat 63  Q
    |||||||||||||||| |||| ||||| ||||||||||| ||||| ||||    
T  24782053 tatgaaaacaatttgatttgattttatcttttgttatagaaatagcttat 24782004  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 29249445 - 29249400
Alignment:
Q  37 ttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||||    
T  29249445 ttatattttgttatagaaatagctgatacataagcacttatatgat 29249400  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 507210 - 507154
Alignment:
Q  18 aaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcact 74  Q
    |||||||| | |||| | ||||| ||||||||||| |||| ||||||||||||||||    
T  507210 aaaacaatctaactttattttatcttttgttatagaaataatttatacataagcact 507154  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1810398 - 1810454
Alignment:
Q  36 tttattttttgttataggaatagtttatacataagcacttatatgattagtgcttat 92  Q
    ||||| ||||||||||| ||||| || | ||||||||||||||||||  ||||||||    
T  1810398 tttatcttttgttatagaaatagcttttgcataagcacttatatgataggtgcttat 1810454  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 3204618 - 3204686
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||||| || ||||| | ||||| |||| |||||| | |||||||| | ||||||||||||||||    
T  3204618 tatgaaaacagttcgactttattttatcttttattatagaagtagtttattcgtaagcacttatatgat 3204686  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 3217266 - 3217334
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    |||||||| |||||||||| | ||||| || | ||| |  ||||| |||||||||||||||||||||||    
T  3217266 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgat 3217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 6310300 - 6310368
Alignment:
Q  14 tatgaaaacaatttgacttgagtttattttttgttataggaatagtttatacat-aagcacttatatga 81  Q
    ||||||||||||| ||||| | || || ||||||||||| ||| | |||||||| ||||||||||||||    
T  6310300 tatgaaaacaattagactttacttcatcttttgttatagaaattgattatacataaagcacttatatga 6310368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 29940789 - 29940729
Alignment:
Q  15 atgaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcactt 75  Q
    |||||||||| ||||||| | ||||| ||||||||||| || || |||||| |||||||||    
T  29940789 atgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcactt 29940729  T

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Target: scaffold0428 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 3895 - 3832
Alignment:
Q  17 gaaaacaatttgacttgagtttattttttgttataggaatagtttatacataagcacttatatg 80  Q
    ||||||| | |||||| ||||||| ||||||||||  ||||| ||| |||||||||||||||||    
T  3895 gaaaacagtatgacttcagtttatcttttgttataaaaatagcttacacataagcacttatatg 3832  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 5999 - 5945
Alignment:
Q  28 gacttgagtttattttttgttataggaatagtttatacataagcacttatatgat 82  Q
    ||||||| ||||| ||||||||| | ||| |||||||||||| ||||||||||||    
T  5999 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgat 5945  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 160059 - 160107
Alignment:
Q  25 tttgacttgagtttattttttgttataggaatagtttatacataagcac 73  Q
    |||||||| | ||||| ||||| |||||||||||||||| |||||||||    
T  160059 tttgactttattttatcttttgctataggaatagtttatgcataagcac 160107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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