View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10580_high_26 (Length: 238)
Name: NF10580_high_26
Description: NF10580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10580_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 6854671 - 6854443
Alignment:
| Q |
1 |
tgttgaacctctatagccaaaaaatatgccaaattctaaagttgtttgagcgtaaactaacttttaatctttggtaatgtgttgctgaatgtggggaagt |
100 |
Q |
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| T |
6854671 |
tgttgaacctctatagccaaaaaatatgccaaattctaaagttgtttgagcgtaaactaacttttaatctttggtaatgtgttgctgaatgtggggaagt |
6854572 |
T |
|
| Q |
101 |
gaattgccagtagctaagatgtaatgattgtaatctacatagactaacatcactatagtgtagtaaagagtgataagtgtaaacagaaaaaggttatgtc |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
6854571 |
gaattgccagtagctaagatgtaatgattgtaatctacatagactaacatcactatagtgtagtaaagagtgataagtgtaaacaaaaaaaggttatgtc |
6854472 |
T |
|
| Q |
201 |
tgcttggtgtaaaatgt-gtttcttgatg |
228 |
Q |
| |
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||||||||||||||||| ||||||||||| |
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| T |
6854471 |
tgcttggtgtaaaatgtggtttcttgatg |
6854443 |
T |
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